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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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"CHEBI:19873",
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{
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"CHEBI:40826",
"CHEBI:12056"
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{
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{
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{
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{
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"cpd19181"
]
}
},
{
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]
},
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],
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}
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{
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},
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}
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{
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},
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"CHEBI:29995",
"CHEBI:22660",
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"CHEBI:132943",
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"CHEBI:13085",
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"CHEBI:29992",
"CHEBI:40900"
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"HMDB62501",
"HMDB00191"
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{
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]
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"CHEBI:58416",
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{
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},
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"CHEBI:2514",
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"CHEBI:40556"
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"HMDB01432"
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}
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{
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"CHEBI:22660",
"CHEBI:29991",
"CHEBI:132943",
"CHEBI:35391",
"CHEBI:13085",
"CHEBI:40913",
"CHEBI:21244",
"CHEBI:40853",
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"HMDB62501",
"HMDB00191"
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{
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]
},
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{
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},
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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{
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},
{
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{
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{
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{
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"CHEBI:21057",
"CHEBI:33930",
"CHEBI:12999"
],
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}
},
{
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"mppp9_h"
]
},
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],
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"CHEBI:25109",
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"CHEBI:14552",
"CHEBI:14553"
],
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}
},
{
"id":"man1p_c",
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]
},
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"CHEBI:43854",
"CHEBI:12327",
"CHEBI:18205",
"CHEBI:58409",
"CHEBI:10261",
"CHEBI:21058"
],
"hmdb":[
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"HMDB06330"
],
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],
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],
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],
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}
},
{
"id":"lac__D_e",
"name":"D-Lactate",
"compartment":"e",
"formula":"C3H5O3",
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"lac_DASH_D_e"
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},
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"lac__D"
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"CHEBI:341",
"CHEBI:18684",
"CHEBI:43701",
"CHEBI:11001",
"CHEBI:42111",
"CHEBI:42105"
],
"hmdb":[
"HMDB01311",
"HMDB00171"
],
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"JVTAAEKCZFNVCJ-UWTATZPHSA-M"
],
"kegg.compound":[
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"2284"
],
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}
},
{
"id":"man6p_c",
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]
},
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"META:CPD-15980",
"META:CPD-15979"
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"CHEBI:48042",
"CHEBI:48066",
"CHEBI:4211",
"CHEBI:13000",
"CHEBI:17369"
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],
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"24709"
],
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}
},
{
"id":"mppp9me_h",
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},
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}
},
{
"id":"lac__D_m",
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"formula":"C3H5O3",
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},
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"CHEBI:18684",
"CHEBI:43701",
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"CHEBI:42111",
"CHEBI:42105"
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"HMDB00171"
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"2284"
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}
},
{
"id":"2m6phol_h",
"name":"2-Methyl-6-phytylquinol",
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},
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],
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}
},
{
"id":"man6p_h",
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"man6p_h"
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},
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"META:CPD-15979"
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}
},
{
"id":"lac__L_h",
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"lac_DASH_L_h"
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},
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"HMDB00190",
"HMDB03328"
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"29708",
"6807616"
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{
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],
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}
},
{
"id":"msa_m",
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},
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},
{
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"6807616"
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{
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{
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{
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},
{
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},
{
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{
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},
{
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},
{
"id":"melt_h",
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},
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{
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},
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},
{
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},
{
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},
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"74113",
"425977",
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"425958"
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},
{
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"C02702"
],
"metanetx.chemical":[
"MNXM247"
],
"reactome.compound":[
"379746",
"379745"
],
"sabiork":[
"3863"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12164"
]
}
},
{
"id":"phom_h",
"name":"O-Phospho-L-homoserine",
"compartment":"h",
"formula":"C4H8NO6P",
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"phom_h"
]
},
"annotation":{
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"phom"
],
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"META:O-PHOSPHO-L-HOMOSERINE"
],
"chebi":[
"CHEBI:21965",
"CHEBI:7691",
"CHEBI:15961",
"CHEBI:57590",
"CHEBI:12717",
"CHEBI:12693"
],
"hmdb":[
"HMDB03484",
"HMDB06495",
"HMDB62692"
],
"inchi_key":[
"FXDNYOANAXWZHG-VKHMYHEASA-L"
],
"kegg.compound":[
"C01102"
],
"metanetx.chemical":[
"MNXM1334"
],
"sabiork":[
"2246"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00809"
]
}
},
{
"id":"paps_h",
"name":"3'-Phosphoadenylyl sulfate",
"compartment":"h",
"formula":"C10H11N5O13P2S",
"notes":{
"original_bigg_ids":[
"paps_h"
]
},
"annotation":{
"bigg.metabolite":[
"paps"
],
"biocyc":[
"META:PAPS"
],
"chebi":[
"CHEBI:17980",
"CHEBI:11680",
"CHEBI:19857",
"CHEBI:11679",
"CHEBI:58339",
"CHEBI:1353"
],
"hmdb":[
"HMDB01134",
"HMDB62646"
],
"inchi_key":[
"GACDQMDRPRGCTN-KQYNXXCUSA-J"
],
"kegg.compound":[
"C00053"
],
"metanetx.chemical":[
"MNXM49"
],
"reactome.compound":[
"741440",
"158471"
],
"sabiork":[
"1776"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00044"
]
}
},
{
"id":"photon298_c",
"name":"Photon (281 to 306 nm, UVB)",
"compartment":"c",
"notes":{
"original_bigg_ids":[
"photon298_c"
]
},
"annotation":{
"bigg.metabolite":[
"photon298"
],
"metanetx.chemical":[
"MNXM145920"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30502"
]
}
},
{
"id":"prpncoa_c",
"name":"Propenoyl-CoA",
"compartment":"c",
"formula":"C24H34N7O17P3S",
"notes":{
"original_bigg_ids":[
"prpncoa_c"
]
},
"annotation":{
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"prpncoa"
],
"biocyc":[
"META:ACRYLYL-COA"
],
"chebi":[
"CHEBI:26301",
"CHEBI:13722",
"CHEBI:8488",
"CHEBI:15513",
"CHEBI:57367"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/04437fe9-7f67-491c-bfba-52e7b1b43ed6"
],
"hmdb":[
"HMDB06507",
"HMDB02307"
],
"inchi_key":[
"POODSGUMUCVRTR-IEXPHMLFSA-J"
],
"kegg.compound":[
"C00894"
],
"lipidmaps":[
"LMFA07050282",
"LMFA07050283"
],
"metanetx.chemical":[
"MNXM650"
],
"sabiork":[
"2181"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00663"
]
}
},
{
"id":"paps_m",
"name":"3'-Phosphoadenylyl sulfate",
"compartment":"m",
"formula":"C10H11N5O13P2S",
"notes":{
"original_bigg_ids":[
"paps_m"
]
},
"annotation":{
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"paps"
],
"biocyc":[
"META:PAPS"
],
"chebi":[
"CHEBI:17980",
"CHEBI:11680",
"CHEBI:19857",
"CHEBI:11679",
"CHEBI:58339",
"CHEBI:1353"
],
"hmdb":[
"HMDB01134",
"HMDB62646"
],
"inchi_key":[
"GACDQMDRPRGCTN-KQYNXXCUSA-J"
],
"kegg.compound":[
"C00053"
],
"metanetx.chemical":[
"MNXM49"
],
"reactome.compound":[
"741440",
"158471"
],
"sabiork":[
"1776"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00044"
]
}
},
{
"id":"prpncoa_m",
"name":"Propenoyl-CoA",
"compartment":"m",
"formula":"C24H34N7O17P3S",
"notes":{
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"prpncoa_m"
]
},
"annotation":{
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"prpncoa"
],
"biocyc":[
"META:ACRYLYL-COA"
],
"chebi":[
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"CHEBI:13722",
"CHEBI:8488",
"CHEBI:15513",
"CHEBI:57367"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/04437fe9-7f67-491c-bfba-52e7b1b43ed6"
],
"hmdb":[
"HMDB06507",
"HMDB02307"
],
"inchi_key":[
"POODSGUMUCVRTR-IEXPHMLFSA-J"
],
"kegg.compound":[
"C00894"
],
"lipidmaps":[
"LMFA07050282",
"LMFA07050283"
],
"metanetx.chemical":[
"MNXM650"
],
"sabiork":[
"2181"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00663"
]
}
},
{
"id":"photon437_u",
"name":"Photon (406 to 454 nm, indigo/blue)",
"compartment":"u",
"notes":{
"original_bigg_ids":[
"photon437_u"
]
},
"annotation":{
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"photon437"
],
"metanetx.chemical":[
"MNXM145817"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30503"
]
}
},
{
"id":"pcrd_u",
"name":"Plastocyanin(Cu+)",
"compartment":"u",
"notes":{
"original_bigg_ids":[
"pccu1p_u"
]
},
"annotation":{
"bigg.metabolite":[
"pcrd"
],
"metanetx.chemical":[
"MNXM145921"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30034"
]
}
},
{
"id":"photon438_u",
"name":"Photon (378 to 482 nm, violet/blue)",
"compartment":"u",
"notes":{
"original_bigg_ids":[
"photon438_u"
]
},
"annotation":{
"bigg.metabolite":[
"photon438"
],
"metanetx.chemical":[
"MNXM145816"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30504"
]
}
},
{
"id":"prpncoa_n",
"name":"Propenoyl-CoA",
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"formula":"C24H34N7O17P3S",
"notes":{
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"prpncoa_n"
]
},
"annotation":{
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"prpncoa"
],
"biocyc":[
"META:ACRYLYL-COA"
],
"chebi":[
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"CHEBI:13722",
"CHEBI:8488",
"CHEBI:15513",
"CHEBI:57367"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/04437fe9-7f67-491c-bfba-52e7b1b43ed6"
],
"hmdb":[
"HMDB06507",
"HMDB02307"
],
"inchi_key":[
"POODSGUMUCVRTR-IEXPHMLFSA-J"
],
"kegg.compound":[
"C00894"
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"LMFA07050283"
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"MNXM650"
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"sabiork":[
"2181"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00663"
]
}
},
{
"id":"pcox_u",
"name":"Plastocyanin(Cu2+)",
"compartment":"u",
"notes":{
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"pccu2p_u"
]
},
"annotation":{
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],
"metanetx.chemical":[
"MNXM145922"
],
"sbo":"SBO:0000247",
"seed.compound":[
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]
}
},
{
"id":"prpp_c",
"name":"5-Phospho-alpha-D-ribose 1-diphosphate",
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]
},
"annotation":{
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],
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"chebi":[
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"CHEBI:20625",
"CHEBI:12160",
"CHEBI:45139",
"CHEBI:12159",
"CHEBI:17111",
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],
"hmdb":[
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"HMDB62643"
],
"inchi_key":[
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],
"kegg.compound":[
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"sbo":"SBO:0000247",
"seed.compound":[
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]
}
},
{
"id":"photon450_h",
"name":"Photon (417 to 472 nm, indigo/blue)",
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"notes":{
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"photon450_h"
]
},
"annotation":{
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],
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"sbo":"SBO:0000247",
"seed.compound":[
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]
}
},
{
"id":"2p4c2me_h",
"name":"2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol",
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"pcdme_h"
]
},
"annotation":{
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"biocyc":[
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"chebi":[
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"CHEBI:11650",
"CHEBI:11649",
"CHEBI:1266",
"CHEBI:16840"
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"inchi_key":[
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],
"sbo":"SBO:0000247",
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]
}
},
{
"id":"photon490_s",
"name":"Photon (451 to 526 nm, blue/green)",
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"notes":{
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"photon490_s"
]
},
"annotation":{
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],
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"sbo":"SBO:0000247",
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}
},
{
"id":"pchlda_h",
"name":"Protochlorophyllide a",
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"pchlda_h"
]
},
"annotation":{
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],
"metanetx.chemical":[
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}
},
{
"id":"photon646_h",
"name":"Photon (608 to 666 nm, orange/red)",
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"notes":{
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"photon646_h"
]
},
"annotation":{
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],
"metanetx.chemical":[
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"sbo":"SBO:0000247",
"seed.compound":[
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}
},
{
"id":"photon673_u",
"name":"Photon (659 to 684 nm, red)",
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"photon673_u"
]
},
"annotation":{
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],
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"sbo":"SBO:0000247",
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}
},
{
"id":"prpp_h",
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},
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"CHEBI:17111",
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"HMDB62643"
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}
},
{
"id":"phdp_h",
"name":"Phytyl diphosphate",
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"pdp_h"
]
},
"annotation":{
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"chebi":[
"CHEBI:8197",
"CHEBI:58404",
"CHEBI:14837",
"CHEBI:75837",
"CHEBI:75434",
"CHEBI:18187"
],
"hmdb":[
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],
"kegg.compound":[
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}
},
{
"id":"pser__L_h",
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"pser_DASH_L_h"
]
},
"annotation":{
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"pser__L"
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"biocyc":[
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"chebi":[
"CHEBI:57524",
"CHEBI:12718",
"CHEBI:15811",
"CHEBI:21966",
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],
"hmdb":[
"HMDB00272"
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"inchi_key":[
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"kegg.compound":[
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"sabiork":[
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],
"sbo":"SBO:0000247",
"seed.compound":[
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}
},
{
"id":"photon680_u",
"name":"Photon (662 to 691 nm, red)",
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"photon680_u"
]
},
"annotation":{
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},
{
"id":"phdp_u",
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},
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"CHEBI:75434",
"CHEBI:18187"
],
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}
},
{
"id":"photonVis_e",
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"photonVis_e"
]
},
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}
},
{
"id":"pdx5p_c",
"name":"Pyridoxine 5'-phosphate",
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"pdx5p_c"
]
},
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"chebi":[
"CHEBI:26430",
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"CHEBI:58589",
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"hmdb":[
"HMDB01319"
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"1684"
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"sbo":"SBO:0000247",
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}
},
{
"id":"phphbda_h",
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"phphbda_h"
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},
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"chebi":[
"CHEBI:38257",
"CHEBI:58687"
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"inchi_key":[
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}
},
{
"id":"psphings_c",
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"psphings_c"
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},
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"chebi":[
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"hmdb":[
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}
},
{
"id":"pe1801819Z_c",
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},
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},
{
"id":"psqldp_c",
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"psqldp_c"
]
},
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"chebi":[
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"hmdb":[
"HMDB01278"
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}
},
{
"id":"phphtna_u",
"name":"Pheophytin a",
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"phphtna_u"
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},
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"phphtna"
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"chebi":[
"CHEBI:44895",
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},
{
"id":"phpyr_c",
"name":"Phenylpyruvate",
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"formula":"C9H7O3",
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"phpyr_c"
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},
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"CHEBI:62225",
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{
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},
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"CHEBI:17432",
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{
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},
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}
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{
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{
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{
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"HMDB59621"
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{
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}
},
{
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{
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{
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}
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{
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{
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{
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}
},
{
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},
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},
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},
{
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"annotation":{
"bigg.reaction":[
"HCO3_h_ti"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"H2Oth",
"name":"H2O transport, chloroplast",
"metabolites":{
"h2o_c":-1.0,
"h2o_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s12_g4049_t1 or CRv4_Au5_s17_g7269_t1",
"subsystem":"Transport, chloroplast",
"notes":{
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]
},
"annotation":{
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],
"biocyc":[
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"META:TRANS-RXN0-547"
],
"metanetx.reaction":[
"MNXR98641"
],
"reactome.reaction":[
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"R-CFA-432054",
"R-CFA-432010",
"R-RNO-507868",
"R-OSA-432065",
"R-GGA-432010",
"R-SPO-445714",
"R-PFA-445714",
"R-CFA-432065",
"R-GGA-432067",
"R-TGU-432054",
"R-TGU-445714",
"R-OSA-507868",
"R-DRE-507868",
"R-SPO-507868",
"R-BTA-432054",
"R-GGA-507870",
"R-OSA-432010",
"R-DME-432065",
"R-DRE-432067",
"R-PFA-507868",
"R-SSC-432054",
"R-HSA-432065",
"R-OSA-507870",
"R-HSA-432054",
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"R-CEL-507868",
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"R-SCE-432065",
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"R-DME-432010",
"R-CFA-445714",
"R-DRE-445714",
"R-BTA-507868",
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"R-RNO-432054",
"R-RNO-432010",
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"R-CEL-445714",
"R-DDI-432065",
"R-ATH-432010",
"R-SCE-432054",
"R-MMU-432065",
"R-MMU-445714",
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"R-DRE-507870",
"R-DME-507868",
"R-DME-507870",
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"R-MMU-432010",
"R-HSA-445714",
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"R-RNO-432067",
"R-TGU-432010",
"R-TGU-507868",
"R-DDI-432054",
"R-PFA-507870",
"R-HSA-507870",
"R-XTR-432067",
"R-HSA-432010",
"R-SSC-507868",
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"R-CEL-507870",
"R-DDI-507868",
"R-DRE-432054",
"R-XTR-507870",
"R-DDI-432010",
"R-BTA-432065",
"R-CFA-432067",
"R-OSA-432067",
"R-ATH-432065",
"R-GGA-445714",
"R-SCE-507868",
"R-TGU-432065",
"R-MMU-432067",
"R-TGU-507870",
"R-CFA-507870",
"R-RNO-432065",
"R-MMU-432054",
"R-MMU-507868",
"R-SPO-507870",
"R-SCE-432010",
"R-MMU-507870",
"R-SSC-445714",
"R-HSA-507868",
"R-DME-432067",
"R-SSC-432010",
"R-TGU-432067",
"R-GGA-432054",
"R-BTA-432010",
"R-SCE-445714",
"R-DDI-507870",
"R-ATH-432054",
"R-DDI-432067",
"R-XTR-445714",
"R-BTA-432067",
"R-CFA-507868",
"R-RNO-445714"
],
"rhea":[
"29668",
"29669",
"29667",
"29670"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn08686",
"rxn09745",
"rxn09838",
"rxn09874",
"rxn09812",
"rxn09643",
"rxn05319"
]
}
},
{
"id":"THRNA1th",
"name":"Neutral amino acid transporter (thr-L), chloroplast",
"metabolites":{
"na1_c":-1.0,
"na1_h":1.0,
"thr__L_c":-1.0,
"thr__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s2_g9042_t1",
"subsystem":"Transport, chloroplast",
"notes":{
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"THRNA1th"
]
},
"annotation":{
"bigg.reaction":[
"THRNA1th"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10186",
"rxn09306"
]
}
},
{
"id":"H2th",
"name":"Hydrogen transport, chloroplast",
"metabolites":{
"h2_c":-1.0,
"h2_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
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"H2th"
]
},
"annotation":{
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"H2th"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10542",
"rxn08691",
"rxn08692"
]
}
},
{
"id":"THRth",
"name":"Amino acid transporter (thr-L), chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"thr__L_c":-1.0,
"thr__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1788_t1 or CRv4_Au5_s7_g14019_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"THRth"
]
},
"annotation":{
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"THRth"
],
"biocyc":[
"META:TRANS-RXN-72"
],
"metanetx.reaction":[
"MNXR104850"
],
"rhea":[
"28886",
"28885",
"28883",
"28884"
],
"sabiork":[
"13940#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn09710",
"rxn09305"
]
}
},
{
"id":"TRPth",
"name":"Tryptophan permease, chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"trp__L_c":-1.0,
"trp__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4507_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"TRPth"
]
},
"annotation":{
"bigg.reaction":[
"TRPth"
],
"biocyc":[
"META:TRANS-RXN-76"
],
"metanetx.reaction":[
"MNXR104950"
],
"rhea":[
"28882",
"28881",
"28880",
"28879"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09709",
"rxn09326",
"rxn05663"
]
}
},
{
"id":"TSULth",
"name":"Thiosulfate porter, chloroplast",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"tsul_c":-1.0,
"tsul_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s6_g12536_t1 and CRv4_Au5_s7_g14404_t1) or (CRv4_Au5_s6_g12536_t1 and CRv4_Au5_s6_g12873_t1)",
"subsystem":"Transport, chloroplast",
"notes":{
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"TSULth"
]
},
"annotation":{
"bigg.reaction":[
"TSULth"
],
"ec-code":[
"3.6.3.25"
],
"metanetx.reaction":[
"MNXR104968"
],
"rhea":[
"29874#2",
"29872#2",
"29873#2",
"29871#2"
],
"sbo":"SBO:0000185"
}
},
{
"id":"HISt2r",
"name":"L histidine reversible transport via proton symport",
"metabolites":{
"h_c":1.0,
"h_e":-1.0,
"his__L_c":1.0,
"his__L_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1788_t1 or CRv4_Au5_s7_g14019_t1",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"HISt"
]
},
"annotation":{
"bigg.reaction":[
"HISt2r"
],
"metanetx.reaction":[
"MNXR100645"
],
"rhea":[
"37049",
"37050",
"37048",
"37047"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09744",
"rxn05299",
"rxn11327",
"rxn08719"
]
}
},
{
"id":"HYXNt",
"name":"Hypoxanthine transport",
"metabolites":{
"hxan_c":1.0,
"hxan_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"HXANt"
]
},
"annotation":{
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"HYXNt"
],
"biocyc":[
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"META:TRANS-RXN0-562"
],
"metanetx.reaction":[
"MNXR100749"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10143",
"rxn08737",
"rxn08738"
]
}
},
{
"id":"TYRth",
"name":"Tyrosine permease, chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"tyr__L_c":-1.0,
"tyr__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4507_t1",
"subsystem":"Transport, chloroplast",
"notes":{
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]
},
"annotation":{
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"TYRth"
],
"biocyc":[
"META:TRANS-RXN-77"
],
"metanetx.reaction":[
"MNXR105003"
],
"rhea":[
"28876",
"28875",
"28877",
"28878"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn09338",
"rxn13412",
"rxn05301",
"rxn09708"
]
}
},
{
"id":"HCO3_h_thi",
"name":"Hco3 transport, chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"hco3_c":-1.0,
"hco3_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"HCO3_LPAREN_h_RPAREN_thi"
]
},
"annotation":{
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"HCO3_h_thi"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"UDPGALth",
"name":"UDP-galactose:UMP antiporter, chloroplast",
"metabolites":{
"udpgal_c":-1.0,
"udpgal_h":1.0,
"ump_c":1.0,
"ump_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1611_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"UDPGALth"
]
},
"annotation":{
"bigg.reaction":[
"UDPGALth"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"UDPGth",
"name":"UDP-glucose antiporter, chloroplast",
"metabolites":{
"udp_c":1.0,
"udp_h":-1.0,
"udpg_c":-1.0,
"udpg_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1611_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"UDPGth"
]
},
"annotation":{
"bigg.reaction":[
"UDPGth"
],
"metanetx.reaction":[
"MNXR143431"
],
"sbo":"SBO:0000185"
}
},
{
"id":"HCYSth",
"name":"Homocysteine transport, chloropalst",
"metabolites":{
"hcys__L_c":-1.0,
"hcys__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"HCYSth"
]
},
"annotation":{
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"HCYSth"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"UDPth",
"name":"UDP transport via diffusion, chloroplast",
"metabolites":{
"h_h":1.0,
"udp_c":-1.0,
"udp_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"UDPth"
]
},
"annotation":{
"bigg.reaction":[
"UDPth"
],
"metanetx.reaction":[
"MNXR105076"
],
"reactome.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"UMPth",
"name":"UMP transport via diffusion, chloroplast",
"metabolites":{
"h_h":1.0,
"ump_c":-1.0,
"ump_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"UMPth"
]
},
"annotation":{
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"UMPth"
],
"metanetx.reaction":[
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],
"rhea":[
"27927",
"27929",
"27926",
"27928"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09808",
"rxn09361"
]
}
},
{
"id":"VALth",
"name":"Amino acid transporter (val-L), chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"val__L_c":-1.0,
"val__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1788_t1 or CRv4_Au5_s7_g14019_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"VALth"
]
},
"annotation":{
"bigg.reaction":[
"VALth"
],
"metanetx.reaction":[
"MNXR105188"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn09707",
"rxn11190",
"rxn09374"
]
}
},
{
"id":"5FLURAt",
"name":"Nucleobase transport, fluorouracil (extracellular)",
"metabolites":{
"5flura_c":1.0,
"5flura_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s10_g312_t1 or CRv4_Au5_s10_g494_t1 or CRv4_Au5_s10_g498_t1 or CRv4_Au5_s6_g13513_t1 or CRv4_Au5_s22_g9816_t1 or CRv4_Au5_s46_g11917_t1",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"5FLURAt"
]
},
"annotation":{
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"5FLURAt"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"5FTHFt",
"name":"5-Formyltetrahydrofolate uptake carrier, plasma membrane",
"metabolites":{
"5fthf_c":1.0,
"5fthf_e":-1.0,
"h_c":1.0,
"h_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1126_t1",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"5FTHFt"
]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"6MPURt",
"name":"Nucleobase transport, 6-mercaptopurine (extracellular)",
"metabolites":{
"6mpur_c":1.0,
"6mpur_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s10_g312_t1 or CRv4_Au5_s10_g494_t1 or CRv4_Au5_s10_g498_t1 or CRv4_Au5_s6_g13513_t1 or CRv4_Au5_s22_g9816_t1 or CRv4_Au5_s46_g11917_t1",
"subsystem":"Transport, extracellular",
"notes":{
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]
},
"annotation":{
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"6MPURt"
],
"metanetx.reaction":[
"MNXR95100"
],
"sbo":"SBO:0000185"
}
},
{
"id":"LEUtec",
"name":"L-leucine transport via diffusion",
"metabolites":{
"leu__L_c":1.0,
"leu__L_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"LEUt"
]
},
"annotation":{
"bigg.reaction":[
"LEUtec"
],
"biocyc":[
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],
"metanetx.reaction":[
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],
"sabiork":[
"13056"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn11003"
]
}
},
{
"id":"LIDOt",
"name":"Lidocaine transport (extracellular)",
"metabolites":{
"lido_c":1.0,
"lido_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"LIDOt"
]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"HGENTISth",
"name":"Homogentisate transport",
"metabolites":{
"hgentis_c":-1.0,
"hgentis_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"HGENTISth"
]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"MEGLYXYLt",
"name":"Monoethylglycinexylidide transport (extracellular)",
"metabolites":{
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"meglyxyl_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
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]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"MGt5",
"name":"Magnesium transport in/out via permease (no H+)",
"metabolites":{
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"mg2_e":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4356_t1",
"subsystem":"Transport, extracellular",
"notes":{
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]
},
"annotation":{
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],
"biocyc":[
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],
"metanetx.reaction":[
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"reactome.reaction":[
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"R-OSA-5336466",
"R-BTA-5336453",
"R-SSC-442661",
"R-MMU-5336453",
"R-HSA-5339528",
"R-MMU-5336466",
"R-TGU-5339538",
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"R-ATH-5336453",
"R-BTA-5336466",
"R-RNO-5339538",
"R-SSC-5339538",
"R-SPO-5339528",
"R-DME-5339528",
"R-GGA-5339538",
"R-CEL-5336453",
"R-TGU-5336453",
"R-OSA-5336453",
"R-SCE-5339528",
"R-ATH-5336466",
"R-CFA-5336453",
"R-CEL-5339528",
"R-SPO-5339538",
"R-SSC-5336466",
"R-XTR-5339528",
"R-SSC-5339528",
"R-DRE-5339528",
"R-BTA-5339528",
"R-CFA-442661",
"R-CFA-5339538",
"R-DME-442661",
"R-DME-5339538",
"R-DRE-5339538",
"R-MMU-5339538",
"R-RNO-442661",
"R-RNO-5336453",
"R-DDI-5336466",
"R-RNO-5339528",
"R-HSA-442661",
"R-HSA-5336453",
"R-TGU-5336466",
"R-DRE-5336466",
"R-BTA-442661",
"R-DRE-5336453",
"R-HSA-5339538",
"R-HSA-5336454",
"R-TGU-5339528",
"R-GGA-5339528",
"R-XTR-5339538",
"R-MMU-5339528",
"R-DME-5336453",
"R-RNO-5336466",
"R-CFA-5336466",
"R-CEL-442661",
"R-SPO-5336466",
"R-GGA-5336453",
"R-BTA-5339538",
"R-TGU-442661",
"R-HSA-5336466",
"R-XTR-442661",
"R-CEL-5339538",
"R-MMU-5336430",
"R-DRE-442661",
"R-GGA-5336466",
"R-CFA-5339528"
],
"rhea":[
"29827",
"29828",
"29829",
"29830"
],
"sabiork":[
"12062"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05616",
"rxn08922",
"rxn08923"
]
}
},
{
"id":"ACtr",
"name":"Acetate transporter",
"metabolites":{
"ac_c":1.0,
"ac_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
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"ACt"
]
},
"annotation":{
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"ACtr"
],
"biocyc":[
"META:RXN0-1981",
"META:TRANS-RXN0-567"
],
"metanetx.reaction":[
"MNXR95431"
],
"rhea":[
"27817",
"27814",
"27816",
"27815"
],
"sabiork":[
"12184"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn09866",
"rxn10904",
"rxn08063"
]
}
},
{
"id":"HISth",
"name":"Amino acid transporter (his-L), chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"his__L_c":-1.0,
"his__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1788_t1 or CRv4_Au5_s7_g14019_t1",
"subsystem":"Transport, chloroplast",
"notes":{
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"HISth"
]
},
"annotation":{
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"HISth"
],
"metanetx.reaction":[
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],
"rhea":[
"37049",
"37050",
"37048",
"37047"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn05299",
"rxn11327",
"rxn08719"
]
}
},
{
"id":"NH4t_1",
"name":"Ammonia transport, extracellular",
"metabolites":{
"h_c":1.0,
"h_e":-1.0,
"nh4_c":1.0,
"nh4_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"NH4t"
]
},
"annotation":{
"bigg.reaction":[
"NH4t_1"
],
"metanetx.reaction":[
"MNXR101953"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn11158"
]
}
},
{
"id":"NARK",
"name":"Nitrite transport, extracellular",
"metabolites":{
"no2_c":-1.0,
"no2_e":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s2_g9015_t2 or CRv4_Au5_s9_g15392_t1 or CRv4_Au5_s9_g15690_t1",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"NO2t"
]
},
"annotation":{
"bigg.reaction":[
"NARK"
],
"biocyc":[
"META:TRANS-RXN-137"
],
"metanetx.reaction":[
"MNXR101912"
],
"rhea":[
"28983",
"28986",
"28984",
"28985"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10823",
"rxn08999"
]
}
},
{
"id":"NO3t",
"name":"Nitrate transport, extracellular",
"metabolites":{
"no3_c":1.0,
"no3_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s2_g9015_t2 or CRv4_Au5_s9_g15392_t1 or CRv4_Au5_s9_g15690_t1",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"NO3t"
]
},
"annotation":{
"bigg.reaction":[
"NO3t"
],
"metanetx.reaction":[
"MNXR101992"
],
"rhea":[
"34924",
"34926",
"34923",
"34925"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn10935"
]
}
},
{
"id":"ILEth",
"name":"Vacuolar amino acid transporter (ile-L), chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"ile__L_c":-1.0,
"ile__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4507_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"ILEth"
]
},
"annotation":{
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"ILEth"
],
"metanetx.reaction":[
"MNXR100822"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn13322",
"rxn05244",
"rxn08746"
]
}
},
{
"id":"IMPth",
"name":"IMP transport, chloroplast",
"metabolites":{
"imp_c":-1.0,
"imp_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
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"IMPth"
]
},
"annotation":{
"bigg.reaction":[
"IMPth"
],
"biocyc":[
"META:TRANS-RXN0-566"
],
"metanetx.reaction":[
"MNXR100831"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08749"
]
}
},
{
"id":"IPDPth",
"name":"Isopentenyl-diphosphate transport",
"metabolites":{
"ipdp_c":1.0,
"ipdp_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"IPDPth"
]
},
"annotation":{
"bigg.reaction":[
"IPDPth"
],
"metanetx.reaction":[
"MNXR100876"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn13332"
]
}
},
{
"id":"LEUth",
"name":"Vacuolar amino acid transporter (leu-L), chloroplast",
"metabolites":{
"h_c":-1.0,
"h_h":1.0,
"leu__L_c":-1.0,
"leu__L_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4507_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"LEUth"
]
},
"annotation":{
"bigg.reaction":[
"LEUth"
],
"metanetx.reaction":[
"MNXR101055"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05243",
"rxn08785",
"rxn11119",
"rxn13340"
]
}
},
{
"id":"O2t",
"name":"O2 transport  diffusion ",
"metabolites":{
"o2_c":1.0,
"o2_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"O2t"
]
},
"annotation":{
"bigg.reaction":[
"O2t"
],
"biocyc":[
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],
"metanetx.reaction":[
"MNXR102090"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn05468",
"rxn09031",
"rxn09032",
"rxn09734"
]
}
},
{
"id":"LNLCth",
"name":"Linoleic acid transport, chloroplast",
"metabolites":{
"lnlc_c":-1.0,
"lnlc_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s16_g6221_t1",
"subsystem":"Transport, chloroplast",
"notes":{
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"LNLCth"
]
},
"annotation":{
"bigg.reaction":[
"LNLCth"
],
"metanetx.reaction":[
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],
"rhea":[
"45267",
"45266",
"45265",
"45264"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MAL_na_th",
"name":"L-malate transport to chloroplast by sodium-ion symport",
"metabolites":{
"mal__L_c":-1.0,
"mal__L_h":1.0,
"na1_c":-1.0,
"na1_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"MAL_LPAREN_na_RPAREN_th"
]
},
"annotation":{
"bigg.reaction":[
"MAL_na_th"
],
"metanetx.reaction":[
"MNXR101368"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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]
}
},
{
"id":"ORNt",
"name":"Ornithine transport via diffusion",
"metabolites":{
"orn_c":1.0,
"orn_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
"original_bigg_ids":[
"ORNt"
]
},
"annotation":{
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"ORNt"
],
"biocyc":[
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],
"metanetx.reaction":[
"MNXR102223"
],
"sabiork":[
"7986"
],
"sbo":"SBO:0000185",
"seed.reaction":[
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"rxn09048"
]
}
},
{
"id":"MALGLUth",
"name":"Malate/glutamate antiport",
"metabolites":{
"glu__L_c":1.0,
"glu__L_h":-1.0,
"mal__L_c":-1.0,
"mal__L_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s17_g7309_t1 or CRv4_Au5_s17_g7310_t1 or CRv4_Au5_s17_g7311_t1 or CRv4_Au5_s6_g12607_t1",
"subsystem":"Transport, chloroplast",
"notes":{
"original_bigg_ids":[
"MALGLUth"
]
},
"annotation":{
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"MALGLUth"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"PAIL18111Z160t",
"name":"Aminophospholipid translocase (pail18111Z160), extracellular",
"metabolites":{
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"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pail18111Z160_c":-1.0,
"pail18111Z160_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s12_g3783_t1 or CRv4_Au5_s12_g3784_t1 or CRv4_Au5_s16_g6192_t1",
"subsystem":"Transport, extracellular",
"notes":{
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]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"PAIL1819Z160t",
"name":"Aminophospholipid translocase (pail1819Z160), extracellular",
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"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pail1819Z160_c":-1.0,
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"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s12_g3783_t1 or CRv4_Au5_s12_g3784_t1 or CRv4_Au5_s16_g6192_t1",
"subsystem":"Transport, extracellular",
"notes":{
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]
},
"annotation":{
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"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"ADEt",
"name":"Adenine transport via diffusion",
"metabolites":{
"ade_c":1.0,
"ade_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
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]
},
"annotation":{
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"biocyc":[
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"metanetx.reaction":[
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"sbo":"SBO:0000185",
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}
},
{
"id":"MALOAAth",
"name":"Malate/oxaloacetate shuttle, chloroplast",
"metabolites":{
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"mal__L_h":-1.0,
"oaa_c":-1.0,
"oaa_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
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]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185",
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}
},
{
"id":"ADtr",
"name":"Acetamide transport, extracellular ",
"metabolites":{
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"ad_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
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]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185",
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}
},
{
"id":"PE1801819Zt",
"name":"Aminophospholipid translocase (pe1801819Z), extracellular",
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"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pe1801819Z_c":-1.0,
"pe1801819Z_e":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s12_g3783_t1 or CRv4_Au5_s12_g3784_t1 or CRv4_Au5_s16_g6192_t1",
"subsystem":"Transport, extracellular",
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},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"PE1801829Z12Zt",
"name":"Aminophospholipid translocase (pe1801829Z12Z), extracellular",
"metabolites":{
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"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
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"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s12_g3783_t1 or CRv4_Au5_s12_g3784_t1 or CRv4_Au5_s16_g6192_t1",
"subsystem":"Transport, extracellular",
"notes":{
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},
"annotation":{
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"metanetx.reaction":[
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],
"sbo":"SBO:0000185"
}
},
{
"id":"PE1801835Z9Z12Zt",
"name":"Aminophospholipid translocase (pe1801835Z9Z12Z), extracellular",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
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"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s12_g3783_t1 or CRv4_Au5_s12_g3784_t1 or CRv4_Au5_s16_g6192_t1",
"subsystem":"Transport, extracellular",
"notes":{
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},
"annotation":{
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"sbo":"SBO:0000185"
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},
{
"id":"PE1801845Z9Z12Z15Zt",
"name":"Aminophospholipid translocase (pe1801845Z9Z12Z15Z), extracellular",
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"h_c":1.0,
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"pi_c":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"CRv4_Au5_s12_g3783_t1 or CRv4_Au5_s12_g3784_t1 or CRv4_Au5_s16_g6192_t1",
"subsystem":"Transport, extracellular",
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},
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},
{
"id":"PE18111Z1819Zt",
"name":"Aminophospholipid translocase (pe18111Z1819Z), extracellular",
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"h2o_c":-1.0,
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"pe18111Z1819Z_c":-1.0,
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},
"lower_bound":0.0,
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"gene_reaction_rule":"CRv4_Au5_s12_g3783_t1 or CRv4_Au5_s12_g3784_t1 or CRv4_Au5_s16_g6192_t1",
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},
"annotation":{
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}
},
{
"id":"ALLTNti",
"name":"Allantoin irreversible uniport",
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"alltn_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
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]
},
"annotation":{
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"biocyc":[
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],
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],
"sbo":"SBO:0000185",
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}
},
{
"id":"ALLTTti",
"name":"Allantoate irreversible uniport",
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"alltt_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, extracellular",
"notes":{
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},
"annotation":{
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"sbo":"SBO:0000185",
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}
},
{
"id":"MANth",
"name":"Mannose transport, chloroplast",
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},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport, chloroplast",
"notes":{
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]
},
"annotation":{
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"sabiork":[
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],
"sbo":"SBO:0000185",
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}
},
{
"id":"ARGt5r",
"name":"ARGtiDF",
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{
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"glx_x":1.0
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"R-MMU-507868",
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"R-SCE-445714",
"R-DDI-507870",
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"R-DDI-432067",
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"R-BTA-432067",
"R-CFA-507868",
"R-RNO-445714"
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"29669",
"29667",
"29670"
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"sbo":"SBO:0000185",
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"rxn09838",
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}
},
{
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"name":"Protoheme transport (mitochondria)",
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"pheme_m":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
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"subsystem":"Transport, mitochondria",
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]
},
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"reactome.reaction":[
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"R-RNO-917892",
"R-CEL-917892",
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"R-TGU-917892",
"R-HSA-917892",
"R-MMU-917892",
"R-DRE-917892",
"R-XTR-917892",
"R-SSC-917892",
"R-DME-917892",
"R-GGA-917892"
],
"sbo":"SBO:0000185"
}
},
{
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"accoa_m":1.0,
"coa_c":1.0,
"coa_m":-1.0
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"sbo":"SBO:0000185"
}
},
{
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"pi_m":1.0
},
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},
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"32826",
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"32823"
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},
{
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},
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},
"annotation":{
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},
{
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"h_x":1.0,
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},
{
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"nad_x":-1.0
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},
{
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},
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},
{
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},
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{
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},
{
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},
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},
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},
{
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{
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},
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},
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],
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}
},
{
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"glx_m":-1.0,
"gly_m":1.0,
"pyr_m":1.0
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"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s3_g10803_t1",
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"R-DME-389684",
"R-BTA-389684",
"R-GGA-904864",
"R-MMU-904864",
"R-TGU-904864",
"R-RNO-904864",
"R-BTA-904864",
"R-SSC-389684",
"R-HSA-389684",
"R-XTR-389684",
"R-HSA-904864",
"R-MMU-389684",
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"24250",
"24249"
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}
},
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"19515"
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}
},
{
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"name":"Alanine---glyoxylate aminotransferase, glyoxysome",
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{
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},
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"29330"
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}
},
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}
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},
"annotation":{
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"ec-code":[
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"kegg.reaction":[
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"13606",
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}
},
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"gthox_u":1.0,
"gthrd_u":-2.0
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"lower_bound":0.0,
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"R-XTR-198813",
"R-MMU-198813",
"R-RNO-198813"
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"24427",
"24424",
"24426"
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}
},
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"h_c":1.0,
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"udpglcur_c":-1.0
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"lower_bound":0.0,
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"26075",
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"sbo":"SBO:0000176",
"seed.reaction":[
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}
},
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"bamppald_h":-1.0,
"h2o_h":-1.0,
"h_h":2.0,
"nad_h":-1.0,
"nadh_h":1.0
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},
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"sbo":"SBO:0000176"
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},
{
"id":"ASAPT",
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"ametam_h":1.0,
"h_h":-1.0,
"spmd_h":1.0,
"sprm_h":-1.0
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},
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"2.5.1.16"
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"metanetx.reaction":[
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"19973",
"19974",
"19975"
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"sbo":"SBO:0000176",
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}
},
{
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"h2o_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
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"12230",
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}
},
{
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}
},
{
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"name":"ATP:L-arabinose 1-phosphotransferase",
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"adp_c":1.0,
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"atp_c":-1.0,
"h_c":1.0
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"sbo":"SBO:0000176"
}
},
{
"id":"BADP",
"name":"Beta-Alanine dipeptidase",
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"ala_B_c":1.0,
"ans_c":-1.0,
"h2o_c":-1.0
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"gene_reaction_rule":"CRv4_Au5_s12_g3012_t1",
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},
"annotation":{
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"3.4.13.20"
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"kegg.reaction":[
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],
"metanetx.reaction":[
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"sbo":"SBO:0000176",
"seed.reaction":[
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}
},
{
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"name":"N acetylglucosamine 6 phosphate synthase",
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"acgam6p_c":1.0,
"coa_c":1.0,
"gam6p_c":-1.0,
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"lower_bound":0.0,
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},
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}
},
{
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"lac__D_m":1.0
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"upper_bound":1000.0,
"gene_reaction_rule":"",
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},
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},
{
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"ec-code":[
"1.2.1.16",
"1.2.1.24"
],
"kegg.reaction":[
"R00713"
],
"metanetx.reaction":[
"MNXR104540"
],
"reactome.reaction":[
"R-RNO-888548",
"R-CFA-888548",
"R-ATH-888548",
"R-SPO-888548",
"R-TGU-888548",
"R-GGA-888548",
"R-SCE-888548",
"R-DRE-888548",
"R-CEL-888548",
"R-MMU-888548",
"R-XTR-888548",
"R-BTA-888548",
"R-SSC-888548",
"R-HSA-888548",
"R-DME-888548"
],
"rhea":[
"13218",
"13219",
"13217",
"13220"
],
"sabiork":[
"1085"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00508"
]
}
},
{
"id":"3HAD180_1",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:0)",
"metabolites":{
"3hoctaACP_h":-1.0,
"h2o_h":1.0,
"toctd2eACP_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD180"
]
},
"annotation":{
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"3HAD180_1"
],
"ec-code":[
"4.2.1.61",
"4.2.1.-",
"2.3.1.-"
],
"kegg.reaction":[
"R07764"
],
"metanetx.reaction":[
"MNXR94883"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07979"
]
}
},
{
"id":"3HAD181_1",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase ((11Z)-n-C18:1)",
"metabolites":{
"3hcvac11eACP_h":-1.0,
"h2o_h":1.0,
"t3c11vaceACP_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD181"
]
},
"annotation":{
"bigg.reaction":[
"3HAD181_1"
],
"ec-code":[
"4.2.1.61"
],
"metanetx.reaction":[
"MNXR94884"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07980"
]
}
},
{
"id":"3HAD40_1",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0)",
"metabolites":{
"3hbutACP_h":-1.0,
"but2eACP_h":1.0,
"h2o_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD40"
]
},
"annotation":{
"bigg.reaction":[
"3HAD40_1"
],
"ec-code":[
"2.3.1.85",
"4.2.1.58",
"2.3.1.86",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04428"
],
"metanetx.reaction":[
"MNXR94886"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05329"
]
}
},
{
"id":"3HAD60_1",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0)",
"metabolites":{
"3hhexACP_h":-1.0,
"h2o_h":1.0,
"thex2eACP_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD60"
]
},
"annotation":{
"bigg.reaction":[
"3HAD60_1"
],
"ec-code":[
"2.3.1.85",
"4.2.1.58",
"2.3.1.86",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04954"
],
"metanetx.reaction":[
"MNXR94887"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05330"
]
}
},
{
"id":"CYSS_trdrd",
"name":"Cysteine synthase, thioredoxin",
"metabolites":{
"ac_h":1.0,
"acser_h":-1.0,
"cys__L_h":1.0,
"h_h":1.0,
"so3_h":1.0,
"trdox_h":1.0,
"trdrd_h":-1.0,
"tsul_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s23_g9860_t1 and CRv4_Au5_s8_g14815_t1) or (CRv4_Au5_s23_g9860_t1 and CRv4_Au5_s16_g6345_t1) or (CRv4_Au5_s23_g9860_t1 and CRv4_Au5_s3_g10608_t1) or (CRv4_Au5_s23_g9860_t1 and CRv4_Au5_s16_g6764_t2) or (CRv4_Au5_s5_g12205_t1 and CRv4_Au5_s8_g14815_t1) or (CRv4_Au5_s5_g12205_t1 and CRv4_Au5_s16_g6345_t1) or (CRv4_Au5_s5_g12205_t1 and CRv4_Au5_s3_g10608_t1) or (CRv4_Au5_s5_g12205_t1 and CRv4_Au5_s16_g6764_t2) or (CRv4_Au5_s5_g12205_t2 and CRv4_Au5_s8_g14815_t1) or (CRv4_Au5_s5_g12205_t2 and CRv4_Au5_s16_g6345_t1) or (CRv4_Au5_s5_g12205_t2 and CRv4_Au5_s3_g10608_t1) or (CRv4_Au5_s5_g12205_t2 and CRv4_Au5_s16_g6764_t2) or (CRv4_Au5_s14_g5492_t1 and CRv4_Au5_s8_g14815_t1) or (CRv4_Au5_s14_g5492_t1 and CRv4_Au5_s16_g6345_t1) or (CRv4_Au5_s14_g5492_t1 and CRv4_Au5_s3_g10608_t1) or (CRv4_Au5_s14_g5492_t1 and CRv4_Au5_s16_g6764_t2) or (CRv4_Au5_s10_g563_t1 and CRv4_Au5_s8_g14815_t1) or (CRv4_Au5_s10_g563_t1 and CRv4_Au5_s16_g6345_t1) or (CRv4_Au5_s10_g563_t1 and CRv4_Au5_s3_g10608_t1) or (CRv4_Au5_s10_g563_t1 and CRv4_Au5_s16_g6764_t2)",
"subsystem":"Cysteine metabolism",
"notes":{
"original_bigg_ids":[
"CYSS_LPAREN_trdrd_RPAREN_"
]
},
"annotation":{
"bigg.reaction":[
"CYSS_trdrd"
],
"ec-code":[
"4.2.99.8",
"2.5.1.49",
"2.5.1.47"
],
"kegg.reaction":[
"R04859"
],
"metanetx.reaction":[
"MNXR95636"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05733"
]
}
},
{
"id":"3HAD80_1",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0)",
"metabolites":{
"3hoctACP_h":-1.0,
"h2o_h":1.0,
"toct2eACP_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g11300_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD80"
]
},
"annotation":{
"bigg.reaction":[
"3HAD80_1"
],
"biocyc":[
"META:4.2.1.59-RXN"
],
"ec-code":[
"2.3.1.85",
"4.2.1.58",
"2.3.1.86",
"4.2.1.61",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04537"
],
"metanetx.reaction":[
"MNXR94888"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05334"
]
}
},
{
"id":"3OAR100_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C10:0)",
"metabolites":{
"3hdecACP_h":1.0,
"3odecACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR100"
]
},
"annotation":{
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"3OAR100_1"
],
"biocyc":[
"META:RXN-9528"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04534"
],
"metanetx.reaction":[
"MNXR94941"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05338"
]
}
},
{
"id":"3OAS120_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:0)",
"metabolites":{
"3oddecACP_h":1.0,
"ACP_h":1.0,
"co2_h":1.0,
"dcaACP_h":-1.0,
"malACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s4_g11616_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS120"
]
},
"annotation":{
"bigg.reaction":[
"3OAS120_1"
],
"ec-code":[
"2.3.1.86"
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"metanetx.reaction":[
"MNXR94955"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3OAS140_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:0)",
"metabolites":{
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"ACP_h":1.0,
"co2_h":1.0,
"ddcaACP_h":-1.0,
"malACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s4_g11616_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS140"
]
},
"annotation":{
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"3OAS140_1"
],
"ec-code":[
"2.3.1.86"
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"metanetx.reaction":[
"MNXR94957"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3OAR120_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0)",
"metabolites":{
"3hddecACP_h":1.0,
"3oddecACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
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"3OAR120"
]
},
"annotation":{
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"3OAR120_1"
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"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04964"
],
"metanetx.reaction":[
"MNXR94942"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05340"
]
}
},
{
"id":"3OAS160_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:0)",
"metabolites":{
"3opalmACP_h":1.0,
"ACP_h":1.0,
"co2_h":1.0,
"malACP_h":-1.0,
"myrsACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s4_g11616_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS160"
]
},
"annotation":{
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"3OAS160_1"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94959"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3OAS180_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:0)",
"metabolites":{
"3ooctdACP_h":1.0,
"ACP_h":1.0,
"co2_h":1.0,
"malACP_h":-1.0,
"palmACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS180"
]
},
"annotation":{
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"3OAS180_1"
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"ec-code":[
"2.3.1.41"
],
"metanetx.reaction":[
"MNXR94961"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3OAS181_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase ((11Z)-n-C18:1)",
"metabolites":{
"3ocvac11eACP_h":1.0,
"ACP_h":1.0,
"co2_h":1.0,
"h_h":-1.0,
"hdeACP_h":-1.0,
"malACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS181"
]
},
"annotation":{
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"3OAS181_1"
],
"ec-code":[
"2.3.1.179"
],
"metanetx.reaction":[
"MNXR94962"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3OAR140_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:0)",
"metabolites":{
"3hmrsACP_h":1.0,
"3omrsACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
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"3OAR140"
]
},
"annotation":{
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"3OAR140_1"
],
"biocyc":[
"META:RXN-9536"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04566"
],
"metanetx.reaction":[
"MNXR94944"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05342"
]
}
},
{
"id":"3OAR160_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:0)",
"metabolites":{
"3hpalmACP_h":1.0,
"3opalmACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
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"3OAR160"
]
},
"annotation":{
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"3OAR160_1"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04543"
],
"metanetx.reaction":[
"MNXR94946"
],
"sbo":"SBO:0000176",
"seed.reaction":[
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]
}
},
{
"id":"3OAR180_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0)",
"metabolites":{
"3hoctaACP_h":1.0,
"3ooctdACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR180"
]
},
"annotation":{
"bigg.reaction":[
"3OAR180_1"
],
"ec-code":[
"1.1.1.100"
],
"metanetx.reaction":[
"MNXR94948"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07992"
]
}
},
{
"id":"3OAS60_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C6:0)",
"metabolites":{
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"ACP_h":1.0,
"butACP_h":-1.0,
"co2_h":1.0,
"malACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s4_g11616_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS60"
]
},
"annotation":{
"bigg.reaction":[
"3OAS60_1"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94963"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3OAR181_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase ((11Z)-n-C18:1)",
"metabolites":{
"3hcvac11eACP_h":1.0,
"3ocvac11eACP_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR181"
]
},
"annotation":{
"bigg.reaction":[
"3OAR181_1"
],
"ec-code":[
"1.1.1.100"
],
"metanetx.reaction":[
"MNXR94949"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07993"
]
}
},
{
"id":"3OAS80_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0)",
"metabolites":{
"3ooctACP_h":1.0,
"ACP_h":1.0,
"co2_h":1.0,
"hexACP_h":-1.0,
"malACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s4_g11616_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS80"
]
},
"annotation":{
"bigg.reaction":[
"3OAS80_1"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94964"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CYSTBL",
"name":"Cystathionine beta-lyase",
"metabolites":{
"cys__L_h":1.0,
"h2o_h":1.0,
"h2s_h":-1.0,
"h_h":-1.0,
"nh4_h":-1.0,
"pyr_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s16_g6444_t1",
"subsystem":"Cysteine metabolism",
"notes":{
"original_bigg_ids":[
"CYSTBL"
]
},
"annotation":{
"bigg.reaction":[
"CYSTBL"
],
"biocyc":[
"META:LCYSDESULF-RXN"
],
"ec-code":[
"4.4.1.28",
"4.4.1.8",
"4.4.1.1"
],
"kegg.reaction":[
"R00782"
],
"metanetx.reaction":[
"MNXR96994"
],
"rhea":[
"24932",
"24931",
"24933",
"24934"
],
"sabiork":[
"1131"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00566"
]
}
},
{
"id":"ACCOAC_1",
"name":"Acetyl-CoA carboxylase (biotin-dependent)",
"metabolites":{
"accoa_h":-1.0,
"btnCCP_h":1.0,
"cbtnCCP_h":-1.0,
"h_h":-1.0,
"malcoa_h":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s17_g7349_t1 and CRv4_Au5_s12_g2759_t1) or (CRv4_Au5_s17_g7349_t1 and CRv4_Au5_s12_g3449_t1) or (CRv4_Au5_s17_g7349_t1 and CRv4_Au5_s8_g14652_t1) or (CRv4_Au5_s1_g1722_t1 and CRv4_Au5_s12_g2759_t1) or (CRv4_Au5_s1_g1722_t1 and CRv4_Au5_s12_g3449_t1) or (CRv4_Au5_s1_g1722_t1 and CRv4_Au5_s8_g14652_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ACCOAC"
]
},
"annotation":{
"bigg.reaction":[
"ACCOAC_1"
],
"ec-code":[
"6.4.1.2"
],
"kegg.reaction":[
"R04386"
],
"metanetx.reaction":[
"MNXR95220"
],
"sabiork":[
"4081"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06673"
]
}
},
{
"id":"ACOATA_1",
"name":"Beta-ketoacyl-acyl-carrier-protein synthase III",
"metabolites":{
"ACP_h":-1.0,
"acACP_h":1.0,
"accoa_h":-1.0,
"coa_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s4_g11616_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ACOATA"
]
},
"annotation":{
"bigg.reaction":[
"ACOATA_1"
],
"biocyc":[
"META:ACP-S-ACETYLTRANSFER-RXN"
],
"ec-code":[
"2.3.1.180",
"2.3.1.85",
"2.3.1.86",
"2.3.1.179",
"2.3.1.-",
"2.3.1.38",
"2.3.1.41"
],
"kegg.reaction":[
"R01624"
],
"metanetx.reaction":[
"MNXR95376"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05349"
]
}
},
{
"id":"3OAR40_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0)",
"metabolites":{
"3hbutACP_h":1.0,
"actACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR40"
]
},
"annotation":{
"bigg.reaction":[
"3OAR40_1"
],
"biocyc":[
"META:RXN-9514"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04533"
],
"metanetx.reaction":[
"MNXR94951"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05339"
]
}
},
{
"id":"3OAR60_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C6:0)",
"metabolites":{
"3hhexACP_h":1.0,
"3ohexACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR60"
]
},
"annotation":{
"bigg.reaction":[
"3OAR60_1"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04953"
],
"metanetx.reaction":[
"MNXR94952"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05337"
]
}
},
{
"id":"3OAR80_1",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C8:0)",
"metabolites":{
"3hoctACP_h":1.0,
"3ooctACP_h":-1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10590_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR80"
]
},
"annotation":{
"bigg.reaction":[
"3OAR80_1"
],
"biocyc":[
"META:RXN-9524"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04536"
],
"metanetx.reaction":[
"MNXR94953"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05341"
]
}
},
{
"id":"3OAS100_1",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C10:0)",
"metabolites":{
"3odecACP_h":1.0,
"ACP_h":1.0,
"co2_h":1.0,
"malACP_h":-1.0,
"ocACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s10_g406_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s4_g11616_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14144_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s22_g9840_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS100"
]
},
"annotation":{
"bigg.reaction":[
"3OAS100_1"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94954"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR100x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C10:0)",
"metabolites":{
"dcaACP_h":1.0,
"h_h":-1.0,
"nad_h":1.0,
"nadh_h":-1.0,
"tdec2eACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g13296_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR100x"
]
},
"annotation":{
"bigg.reaction":[
"EAR100x_1"
],
"ec-code":[
"2.3.1.-"
],
"metanetx.reaction":[
"MNXR97845"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACP1619ZD9DS",
"name":"Acyl-[acyl-carrier-protein] delta9-desaturase ((9Z)-n-C16:1)",
"metabolites":{
"fdxox_h":-1.0,
"fdxrd_h":1.0,
"h2o_h":2.0,
"hdeACP_h":1.0,
"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0,
"palmACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6229_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7064_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10824_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g13523_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14133_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ACP1619ZD9DS"
]
},
"annotation":{
"bigg.reaction":[
"ACP1619ZD9DS"
],
"metanetx.reaction":[
"MNXR95391"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACP1819ZD9DS",
"name":"Stearoyl-[acyl-carrier-protein] delta9-desaturase ((9Z)-n-C18:1)",
"metabolites":{
"fdxox_h":-1.0,
"fdxrd_h":1.0,
"h2o_h":2.0,
"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0,
"ocdcaACP_h":-1.0,
"octe9ACP_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6229_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7064_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s3_g10824_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g13523_t1) or (CRv4_Au5_s17_g7079_t1 and CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s7_g14133_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ACP1819ZD9DS"
]
},
"annotation":{
"bigg.reaction":[
"ACP1819ZD9DS"
],
"metanetx.reaction":[
"MNXR95392"
],
"sbo":"SBO:0000176"
}
},
{
"id":"BTNC",
"name":"Biotin carboxylase",
"metabolites":{
"adp_h":1.0,
"atp_h":-1.0,
"btnCCP_h":-1.0,
"cbtnCCP_h":1.0,
"h_h":1.0,
"hco3_h":-1.0,
"pi_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s8_g14652_t1 and CRv4_Au5_s1_g1722_t1) or (CRv4_Au5_s8_g14652_t1 and CRv4_Au5_s17_g7349_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"BTNC"
]
},
"annotation":{
"bigg.reaction":[
"BTNC"
],
"ec-code":[
"6.4.1.1",
"6.3.4.14"
],
"kegg.reaction":[
"R04385"
],
"metanetx.reaction":[
"MNXR96330"
],
"sabiork":[
"4080"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06672"
]
}
},
{
"id":"CYSTRS",
"name":"Cysteinyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"cys__L_c":-1.0,
"cystrna_c":1.0,
"ppi_c":1.0,
"trnacys_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s3_g10547_t1 or CRv4_Au5_s23_g9855_t1",
"subsystem":"Cysteine metabolism",
"notes":{
"original_bigg_ids":[
"CYSTL"
]
},
"annotation":{
"bigg.reaction":[
"CYSTRS"
],
"ec-code":[
"6.1.1.16",
"6.1.1.15"
],
"kegg.reaction":[
"R03650"
],
"metanetx.reaction":[
"MNXR97018"
],
"reactome.reaction":[
"R-HSA-379887",
"R-HSA-380158"
],
"sabiork":[
"405"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06435"
]
}
},
{
"id":"FA180ACPHi",
"name":"Fatty-acyl-ACP hydrolase (n-C18:0)",
"metabolites":{
"ACP_h":1.0,
"h2o_h":-1.0,
"h_h":1.0,
"ocdcaACP_h":-1.0,
"ocdca_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g12531_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s9_g15253_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"FA180ACPHi"
]
},
"annotation":{
"bigg.reaction":[
"FA180ACPHi"
],
"ec-code":[
"3.1.2.14"
],
"metanetx.reaction":[
"MNXR99106"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR100y_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0)",
"metabolites":{
"dcaACP_h":1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0,
"tdec2eACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s1_g1674_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR100y"
]
},
"annotation":{
"bigg.reaction":[
"EAR100y_1"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR97846"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR120x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C12:0)",
"metabolites":{
"ddcaACP_h":1.0,
"h_h":-1.0,
"nad_h":1.0,
"nadh_h":-1.0,
"tddec2eACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g13296_t1)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR120x"
]
},
"annotation":{
"bigg.reaction":[
"EAR120x_1"
],
"ec-code":[
"2.3.1.-"
],
"metanetx.reaction":[
"MNXR97847"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR120y_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0)",
"metabolites":{
"ddcaACP_h":1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0,
"tddec2eACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
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"subsystem":"Fatty acid biosynthesis",
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},
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},
{
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"name":"Serine O-acetyltransferase",
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"coa_h":1.0,
"ser__L_h":-1.0
},
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"subsystem":"Cysteine metabolism;Sulfur metabolism",
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},
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],
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"24563",
"24562",
"24561"
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"sabiork":[
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"sbo":"SBO:0000176",
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}
},
{
"id":"EAR140x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C14:0)",
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"myrsACP_h":1.0,
"nad_h":1.0,
"nadh_h":-1.0,
"tmrs2eACP_h":-1.0
},
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},
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},
{
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"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:0)",
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"sbo":"SBO:0000176"
}
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"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C16:0)",
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"nad_h":1.0,
"nadh_h":-1.0,
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"tpalm2eACP_h":-1.0
},
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},
{
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"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:0)",
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},
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"sbo":"SBO:0000176"
}
},
{
"id":"EAR180x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C18:0)",
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"nad_h":1.0,
"nadh_h":-1.0,
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"toctd2eACP_h":-1.0
},
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"subsystem":"Fatty acid biosynthesis",
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]
},
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"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"FA1819ZACPH",
"name":"Oleoyl-[acyl-carrier-protein] hydrolase ((9Z)-n-C18:1)",
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"h2o_h":-1.0,
"h_h":1.0,
"ocdce9a_h":1.0,
"octe9ACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g12531_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s9_g15253_t1)",
"subsystem":"Fatty acid biosynthesis",
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},
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"sbo":"SBO:0000176"
}
},
{
"id":"FA181ACPHi",
"name":"Oleoyl-[acyl-carrier-protein] hydrolase ((11Z)-n-C18:1)",
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"h2o_h":-1.0,
"h_h":1.0,
"ocdcea_h":1.0,
"octeACP_h":-1.0
},
"lower_bound":0.0,
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"subsystem":"Fatty acid biosynthesis",
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]
},
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"sbo":"SBO:0000176"
}
},
{
"id":"FA80ACPHi_1",
"name":"Fatty-acyl-ACP hydrolase (n-C8:0)",
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"h2o_h":-1.0,
"h_h":1.0,
"ocACP_h":-1.0,
"octa_h":1.0
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"subsystem":"Fatty acid biosynthesis",
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},
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"ec-code":[
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"KAS14_1",
"name":"Beta-ketoacyl-ACP synthase",
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"acACP_h":-1.0,
"actACP_h":1.0,
"co2_h":1.0,
"malACP_h":-1.0
},
"lower_bound":0.0,
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"subsystem":"Fatty acid biosynthesis",
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},
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"biocyc":[
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"ec-code":[
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"2.3.1.85",
"2.3.1.86",
"2.3.1.179",
"2.3.1.-",
"2.3.1.41"
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"kegg.reaction":[
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],
"metanetx.reaction":[
"MNXR100912"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05347"
]
}
},
{
"id":"MCOATA_1",
"name":"Malonyl-CoA:[acyl-carrier-protein] S-malonyltransferase",
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"malcoa_h":-1.0
},
"lower_bound":-1000.0,
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"subsystem":"Fatty acid biosynthesis",
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},
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"biocyc":[
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"ec-code":[
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"2.3.1.86",
"2.3.1.0",
"2.3.1.39",
"2.3.1.-"
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"sbo":"SBO:0000176",
"seed.reaction":[
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}
},
{
"id":"ACACT2m",
"name":"Acetyl-CoA C-acyltransferase (C6:0)",
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"accoa_m":-1.0,
"btcoa_m":-1.0,
"coa_m":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"CRv4_Au5_s17_g7516_t1",
"subsystem":"Fatty acid elongation in mitochondria",
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},
"annotation":{
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"biocyc":[
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"2.3.1.9",
"2.3.1.16"
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"kegg.reaction":[
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"metanetx.reaction":[
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"reactome.reaction":[
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"R-BTA-77321",
"R-MMU-77321",
"R-SSC-77321",
"R-TGU-77321",
"R-RNO-77321",
"R-DME-77321",
"R-HSA-77321",
"R-CFA-77321",
"R-GGA-77321",
"R-XTR-77321"
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"rhea":[
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"31113",
"31111",
"31112"
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"sbo":"SBO:0000176",
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}
},
{
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"name":"Acetyl-CoA C-acyltransferase (C8:0)",
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"accoa_m":-1.0,
"coa_m":1.0,
"hxcoa_m":-1.0
},
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"subsystem":"Fatty acid elongation in mitochondria",
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"ec-code":[
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"metanetx.reaction":[
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"sbo":"SBO:0000176"
}
},
{
"id":"EAR181x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) ((11Z)-n-C18:1)",
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"nad_h":1.0,
"nadh_h":-1.0,
"octeACP_h":1.0,
"t3c11vaceACP_h":-1.0
},
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"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g13296_t1)",
"subsystem":"Fatty acid biosynthesis",
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"metanetx.reaction":[
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"sbo":"SBO:0000176"
}
},
{
"id":"EAR181y_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) ((11Z)-n-C18:1)",
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"nadp_h":1.0,
"nadph_h":-1.0,
"octeACP_h":1.0,
"t3c11vaceACP_h":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s1_g1674_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2)",
"subsystem":"Fatty acid biosynthesis",
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"sbo":"SBO:0000176"
}
},
{
"id":"EAR40x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C4:0)",
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"butACP_h":1.0,
"h_h":-1.0,
"nad_h":1.0,
"nadh_h":-1.0
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"lower_bound":0.0,
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"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g13296_t1)",
"subsystem":"Fatty acid biosynthesis",
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"ec-code":[
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"metanetx.reaction":[
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"sbo":"SBO:0000176"
}
},
{
"id":"SATm",
"name":"Serine O-acetyltransferase, mitochondria",
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"acser_m":1.0,
"coa_m":1.0,
"ser__L_m":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"CRv4_Au5_s17_g7321_t1",
"subsystem":"Cysteine metabolism;Sulfur metabolism",
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},
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"kegg.reaction":[
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"24563",
"24562",
"24561"
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"sabiork":[
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"seed.reaction":[
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}
},
{
"id":"EAR40y_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C4:0)",
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"butACP_h":1.0,
"h_h":-1.0,
"nadp_h":1.0,
"nadph_h":-1.0
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"lower_bound":0.0,
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"subsystem":"Fatty acid biosynthesis",
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},
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"metanetx.reaction":[
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"sbo":"SBO:0000176"
}
},
{
"id":"EAR60x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C6:0)",
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"hexACP_h":1.0,
"nad_h":1.0,
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"thex2eACP_h":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s6_g13296_t1)",
"subsystem":"Fatty acid biosynthesis",
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},
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"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR60y_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C6:0)",
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"hexACP_h":1.0,
"nadp_h":1.0,
"nadph_h":-1.0,
"thex2eACP_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s1_g1674_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s16_g6129_t1) or (CRv4_Au5_s13_g4608_t1 and CRv4_Au5_s17_g7486_t2)",
"subsystem":"Fatty acid biosynthesis",
"notes":{
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},
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"ec-code":[
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"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR80x_1",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADH) (n-C8:0)",
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"nad_h":1.0,
"nadh_h":-1.0,
"ocACP_h":1.0,
"toct2eACP_h":-1.0
},
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"subsystem":"Fatty acid metabolism",
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"R-DDI-77325",
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"R-DME-77333",
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"31199"
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},
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"name":"3 hydroxyacyl CoA dehydrogenase  3 oxohexadecanoyl CoA   peroxisomal",
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"h_x":-1.0,
"nad_x":1.0,
"nadh_x":-1.0
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"1.1.1.211"
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"atp_c":-1.0,
"coa_c":-1.0,
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"lnlccoa_c":1.0,
"ppi_c":1.0
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],
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}
},
{
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"dmcital_c":-1.0,
"h2o2_c":1.0,
"h2o_c":-1.0,
"mma_c":1.0,
"o2_c":-1.0
},
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},
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],
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}
},
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"lnlncacoa_c":1.0,
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},
{
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"name":"3 hydroxyacyl CoA dehydratase  3 hydroxydecanoyl CoA   peroxisomal",
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"reactome.reaction":[
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"31191",
"31194",
"31192"
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}
},
{
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"name":"3 hydroxyacyl CoA dehydratase  3 hydroxydodecanoyl CoA   peroxisomal",
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},
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},
{
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"name":"3 hydroxyacyl CoA dehydratase  3 hydroxytetradecanoyl CoA   peroxisomal",
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"td2coa_x":1.0
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},
{
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},
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},
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{
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},
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{
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{
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"name":"Fatty acid omega-hydroxylase (18:1(9Z))",
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{
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{
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"name":"Monoethylglycinexylidide amidohydrolase",
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"gene_reaction_rule":"CRv4_Au5_s7_g13919_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"ACPT1601819Z"
]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGD4DS1829Z12Z1634Z7Z10Z",
"name":"Digalatcosyldiacylglycerol 16-carbon delta4-desaturase (18:2(9Z,12Z)/16:3(4Z,7Z,10Z))",
"metabolites":{
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"dgdg1829Z12Z1634Z7Z10Z_h":1.0,
"fdxox_h":-1.0,
"fdxrd_h":1.0,
"h2o_h":2.0,
"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s16_g6229_t1 or CRv4_Au5_s17_g7064_t1 or CRv4_Au5_s3_g10824_t1 or CRv4_Au5_s6_g13523_t1 or CRv4_Au5_s7_g14133_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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"DGDGD4DS1829Z12Z1634Z7Z10Z"
]
},
"annotation":{
"bigg.reaction":[
"DGDGD4DS1829Z12Z1634Z7Z10Z"
],
"metanetx.reaction":[
"MNXR97275"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGD4DS1839Z12Z15Z1634Z7Z10Z",
"name":"Digalatcosyldiacylglycerol 16-carbon delta4-desaturase (18:3(9Z,12Z,15Z)/16:3(4Z,7Z,10Z))",
"metabolites":{
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"dgdg1839Z12Z15Z1634Z7Z10Z_h":1.0,
"fdxox_h":-1.0,
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"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s16_g6229_t1 or CRv4_Au5_s17_g7064_t1 or CRv4_Au5_s3_g10824_t1 or CRv4_Au5_s6_g13523_t1 or CRv4_Au5_s7_g14133_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DGDGD4DS1839Z12Z15Z1634Z7Z10Z"
]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGD4DS1839Z12Z15Z1644Z7Z10Z13Z",
"name":"Digalatcosyldiacylglycerol 16-carbon delta4-desaturase (18:3(9Z,12Z,15Z)/16:4(4Z,7Z,10Z,13Z))",
"metabolites":{
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"dgdg1839Z12Z15Z1644Z7Z10Z13Z_h":1.0,
"fdxox_h":-1.0,
"fdxrd_h":1.0,
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"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s16_g6229_t1 or CRv4_Au5_s17_g7064_t1 or CRv4_Au5_s3_g10824_t1 or CRv4_Au5_s6_g13523_t1 or CRv4_Au5_s7_g14133_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DGDGD4DS1839Z12Z15Z1644Z7Z10Z13Z"
]
},
"annotation":{
"bigg.reaction":[
"DGDGD4DS1839Z12Z15Z1644Z7Z10Z13Z"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"ALCD19",
"name":"Alcohol dehydrogenase (glycerol)",
"metabolites":{
"glyald_c":-1.0,
"glyc_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s2_g9414_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"ALCD19"
]
},
"annotation":{
"bigg.reaction":[
"ALCD19"
],
"ec-code":[
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"1.1.1.21"
],
"kegg.reaction":[
"R01036"
],
"metanetx.reaction":[
"MNXR95709"
],
"rhea":[
"30029",
"30027",
"30028",
"30030"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00763"
]
}
},
{
"id":"ALCD19y",
"name":"Alcohol dehydrogenase  glycerol  NADP ",
"metabolites":{
"glyald_c":-1.0,
"glyc_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s2_g9414_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"ALCD19y"
]
},
"annotation":{
"bigg.reaction":[
"ALCD19y"
],
"biocyc":[
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],
"ec-code":[
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"1.1.1.72",
"1.1.1.21",
"1.1.1.2"
],
"kegg.reaction":[
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],
"metanetx.reaction":[
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],
"rhea":[
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"23595",
"23592",
"23593"
],
"sabiork":[
"395"
],
"sbo":"SBO:0000176",
"seed.reaction":[
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]
}
},
{
"id":"ACPT18111Z18111Z",
"name":"Betaine lipid synthase (3-amino-3-carboxypropyltransferase) (18:1(11Z)/18:1(11Z))",
"metabolites":{
"12dgr18111Z18111Z_c":-1.0,
"5mta_c":1.0,
"amet_c":-1.0,
"dghs18111Z18111Z_c":1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s7_g13919_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"ACPT18111Z18111Z"
]
},
"annotation":{
"bigg.reaction":[
"ACPT18111Z18111Z"
],
"metanetx.reaction":[
"MNXR95406"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ASQDCADS1829Z12Z160",
"name":"Oleate desaturase (2'-18:4(5Z,9Z,12Z,15Z)/18:2(9Z,12Z)/16:0)",
"metabolites":{
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"h2o_c":2.0,
"nad_c":2.0,
"nadh_c":-2.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4859_t1 or CRv4_Au5_s13_g4871_t1 or CRv4_Au5_s17_g7267_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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]
},
"annotation":{
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"ASQDCADS1829Z12Z160"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"ASQDCADS1839Z12Z15Z160",
"name":"Linoleate desaturase (2'-18:4(5Z,9Z,12Z,15Z)/18:3(9Z,12Z,15Z)/16:0)",
"metabolites":{
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"h2o_c":2.0,
"nad_c":2.0,
"nadh_c":-2.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1717_t1 or CRv4_Au5_s1_g1718_t1 or CRv4_Au5_s1_g1719_t1 or CRv4_Au5_s13_g4871_t1 or CRv4_Au5_s17_g7267_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"ASQDCADS1839Z12Z15Z160"
]
},
"annotation":{
"bigg.reaction":[
"ASQDCADS1839Z12Z15Z160"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"ASQDPADS1829Z12Z160",
"name":"Oleate desaturase (2'-18:3(5Z,9Z,12Z)/18:2(9Z,12Z)/16:0)",
"metabolites":{
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"asqdpa1829Z12Z160_c":1.0,
"h2o_c":2.0,
"nad_c":2.0,
"nadh_c":-2.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4859_t1 or CRv4_Au5_s13_g4871_t1 or CRv4_Au5_s17_g7267_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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"ASQDPADS1829Z12Z160"
]
},
"annotation":{
"bigg.reaction":[
"ASQDPADS1829Z12Z160"
],
"metanetx.reaction":[
"MNXR96111"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGD7DS1819Z1617Z",
"name":"Digalatcosyldiacylglycerol palmitate delta7-desaturase (18:1(9Z)/16:1(7Z))",
"metabolites":{
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"dgdg1819Z1617Z_h":1.0,
"fdxox_h":-1.0,
"fdxrd_h":1.0,
"h2o_h":2.0,
"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s16_g6229_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s17_g7064_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s3_g10824_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s6_g13523_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s7_g14133_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s16_g6229_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s17_g7064_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s3_g10824_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s6_g13523_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s7_g14133_t1)",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DGDGD7DS1819Z1617Z"
]
},
"annotation":{
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"DGDGD7DS1819Z1617Z"
],
"metanetx.reaction":[
"MNXR97278"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGD7DS1829Z12Z1617Z",
"name":"Digalatcosyldiacylglycerol palmitate delta7-desaturase (18:2(9Z,12Z)/16:1(7Z))",
"metabolites":{
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"fdxrd_h":1.0,
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"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s16_g6229_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s17_g7064_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s3_g10824_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s6_g13523_t1) or (CRv4_Au5_s13_g4871_t1 and CRv4_Au5_s7_g14133_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s16_g6229_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s17_g7064_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s3_g10824_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s6_g13523_t1) or (CRv4_Au5_s9_g15418_t1 and CRv4_Au5_s7_g14133_t1)",
"subsystem":"Glycerolipid metabolism",
"notes":{
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"DGDGD7DS1829Z12Z1617Z"
]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGGH1819Z160",
"name":"Digalactosyl-diacylglycerol galactohydrolase (18:1(9Z)/16:0)",
"metabolites":{
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"gal_h":1.0,
"h2o_h":-1.0,
"mgdg1819Z160_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1496_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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"DGDGGH1819Z160"
]
},
"annotation":{
"bigg.reaction":[
"DGDGGH1819Z160"
],
"metanetx.reaction":[
"MNXR97280"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGGH1819Z1617Z",
"name":"Digalactosyl-diacylglycerol galactohydrolase (18:1(9Z)/16:1(7Z))",
"metabolites":{
"dgdg1819Z1617Z_h":-1.0,
"gal_h":1.0,
"h2o_h":-1.0,
"mgdg1819Z1617Z_h":1.0
},
"lower_bound":0.0,
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"subsystem":"Glycerolipid metabolism",
"notes":{
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},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGGH1819Z1619Z",
"name":"Digalactosyl-diacylglycerol galactohydrolase (18:1(9Z)/16:1(9Z))",
"metabolites":{
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"gal_h":1.0,
"h2o_h":-1.0,
"mgdg1819Z1619Z_h":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"CRv4_Au5_s1_g1496_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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},
"annotation":{
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"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGGH1819Z1627Z10Z",
"name":"Digalactosyl-diacylglycerol galactohydrolase (18:1(9Z)/16:2(7Z,10Z))",
"metabolites":{
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"gal_h":1.0,
"h2o_h":-1.0,
"mgdg1819Z1627Z10Z_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1496_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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},
"annotation":{
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"DGDGGH1819Z1627Z10Z"
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"metanetx.reaction":[
"MNXR97283"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGGH1819Z1637Z10Z13Z",
"name":"Digalactosyl-diacylglycerol galactohydrolase (18:1(9Z)/16:3(7Z,10Z,13Z))",
"metabolites":{
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"gal_h":1.0,
"h2o_h":-1.0,
"mgdg1819Z1637Z10Z13Z_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1496_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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"DGDGGH1819Z1637Z10Z13Z"
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},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGGH1829Z12Z160",
"name":"Digalactosyl-diacylglycerol galactohydrolase (18:2(9Z,12Z)/16:0)",
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"gal_h":1.0,
"h2o_h":-1.0,
"mgdg1829Z12Z160_h":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"CRv4_Au5_s1_g1496_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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"DGDGGH1829Z12Z160"
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},
"annotation":{
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"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGGH1829Z12Z1617Z",
"name":"Digalactosyl-diacylglycerol galactohydrolase (18:2(9Z,12Z)/16:1(7Z))",
"metabolites":{
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"gal_h":1.0,
"h2o_h":-1.0,
"mgdg1829Z12Z1617Z_h":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1496_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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},
"annotation":{
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],
"metanetx.reaction":[
"MNXR97286"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ASQDPADS1839Z12Z15Z160",
"name":"Linoleate desaturase (2'-18:3(5Z,9Z,12Z)/18:3(9Z,12Z,15Z)/16:0)",
"metabolites":{
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"asqdpa1839Z12Z15Z160_c":1.0,
"h2o_c":2.0,
"nad_c":2.0,
"nadh_c":-2.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1717_t1 or CRv4_Au5_s1_g1718_t1 or CRv4_Au5_s1_g1719_t1 or CRv4_Au5_s13_g4871_t1 or CRv4_Au5_s17_g7267_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
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"ASQDPADS1839Z12Z15Z160"
]
},
"annotation":{
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"ASQDPADS1839Z12Z15Z160"
],
"metanetx.reaction":[
"MNXR96112"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DAGAH16018111Z",
"name":"1,2-diacyl-sn-glycerol acylhydrolase (16:0/18:1(11Z))",
"metabolites":{
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"h2o_c":-1.0,
"h_c":1.0,
"mag160_c":1.0,
"ocdcea_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s1_g1020_t1 or CRv4_Au5_s1_g2116_t1 or CRv4_Au5_s14_g5292_t1 or CRv4_Au5_s14_g5372_t1 or CRv4_Au5_s2_g9351_t1 or CRv4_Au5_s3_g11014_t1 or CRv4_Au5_s5_g12039_t1 or CRv4_Au5_s6_g12901_t1 or CRv4_Au5_s7_g13939_t1 or CRv4_Au5_s27_g10015_t1",
"subsystem":"Glycerolipid metabolism",
"notes":{
"original_bigg_ids":[
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]
},
"annotation":{
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],
"metanetx.reaction":[
"MNXR97083"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DAGAH1601819Z",
"name":"1,2-diacyl-sn-glycerol acylhydrolase (16:0/18:1(9Z))",
"metabolites":{
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"h2o_c":-1.0,
"h_c":1.0,
"mag160_c":1.0,
"ocdce9a_c":1.0
},
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{
"id":"SERTRS",
"name":"Seryl-tRNA synthetase",
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"ppi_c":1.0,
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"trnaser_c":-1.0
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{
"id":"SGAT",
"name":"Serine--glyoxylate aminotransferase",
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{
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"name":"Histidinol-phosphatase, cytosol",
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"h_c":-1.0,
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"pi_c":1.0
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"14467",
"14468",
"14465"
],
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{
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"name":"Glucokinase/hexokinase, chloroplast (glc-B)",
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"atp_h":-1.0,
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}
},
{
"id":"PFKh",
"name":"Phosphofructokinase",
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"h_h":1.0
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},
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{
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"name":"Monogalatcosyldiacylglycerol palmitate delta7-desaturase (18:2(9Z,12Z)/16:1(7Z))",
"metabolites":{
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"fdxrd_h":1.0,
"h2o_h":2.0,
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"nadp_h":4.0,
"nadph_h":-4.0,
"o2_h":-1.0
},
"lower_bound":0.0,
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"metanetx.reaction":[
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}
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{
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"name":"Phosphoglucomutase",
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"g6p_A_c":1.0
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},
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"ec-code":[
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"5.4.2.5"
],
"kegg.reaction":[
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],
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],
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"23538",
"23536",
"23539"
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"9261"
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]
},
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}
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{
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"name":"Glucose-6-phosphate isomerase (g6p-B)",
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},
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"pyr_m":-1.0,
"thmpp_m":-1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"(CRv4_Au5_s1_g2234_t1 and CRv4_Au5_s7_g14191_t1) or (CRv4_Au5_s1_g2234_t1 and CRv4_Au5_s3_g10466_t1) or (CRv4_Au5_s23_g9893_t1 and CRv4_Au5_s29_g10106_t1)",
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"2.2.1.6",
"4.1.1.1"
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]
}
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{
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},
{
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"2.3.1.12"
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],
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],
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{
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},
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},
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{
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},
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"h2o_c":-1.0,
"man_c":1.0
},
"lower_bound":0.0,
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"gene_reaction_rule":"CRv4_Au5_s7_g14169_t1",
"subsystem":"High-mannose type N-glycan biosynthesis",
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},
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}
},
{
"id":"DOLPMT1",
"name":"Dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase (doldpglcnacglcnacman(manman)manmanman)",
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"h_c":1.0
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]
},
"annotation":{
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],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
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"atp_n":-1.0,
"h_n":-1.0,
"mi13456p_n":1.0,
"mi1456p_n":-1.0
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"lower_bound":0.0,
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"sbo":"SBO:0000176"
}
},
{
"id":"DOLPMT2",
"name":"Dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase (doldpglcnacglcnacman(man(man)manman)manmanman)",
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"h_c":1.0
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"DOLPMT2"
],
"metanetx.reaction":[
"MNXR97733"
],
"sbo":"SBO:0000176"
}
},
{
"id":"G12MT1",
"name":"Alpha-1,2-mannosyltransferase (doldpglcnacglcnacman(man)manman)",
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"doldpglcnacglcnacman_man_manman_c":1.0,
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"gdpmann_c":-1.0,
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"subsystem":"N-Glycan biosynthesis",
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},
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"G12MT1"
],
"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"ATPPRT",
"name":"ATP phosphoribosyltransferase",
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"ppi_c":1.0,
"prbatp_c":1.0,
"prpp_c":-1.0
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"gene_reaction_rule":"CRv4_Au5_s9_g15686_t2",
"subsystem":"Histidine metabolism",
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"ADPART"
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},
"annotation":{
"bigg.reaction":[
"ATPPRT"
],
"biocyc":[
"META:ATPPHOSPHORIBOSYLTRANS-RXN"
],
"ec-code":[
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],
"kegg.reaction":[
"R01071"
],
"metanetx.reaction":[
"MNXR96132"
],
"rhea":[
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"18475",
"18473",
"18474"
],
"sbo":"SBO:0000176",
"seed.reaction":[
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}
},
{
"id":"IMACTD",
"name":"Imidazole acetaldeyde dehydrogenase",
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"h_c":2.0,
"im4ac_c":1.0,
"im4act_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0
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"lower_bound":0.0,
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"subsystem":"Histidine metabolism",
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"ALDH_LPAREN_im4ac_RPAREN_"
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"annotation":{
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"IMACTD"
],
"biocyc":[
"META:RXN-10089"
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"ec-code":[
"1.2.1.3"
],
"kegg.reaction":[
"R04065"
],
"metanetx.reaction":[
"MNXR95745"
],
"rhea":[
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"31060",
"31061",
"31062"
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"seed.reaction":[
"rxn02853"
]
}
},
{
"id":"G12MT2",
"name":"Alpha-1,2-mannosyltransferase (doldpglcnacglcnacman(man)manmanman)",
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"doldpglcnacglcnacman_man_manman_c":-1.0,
"doldpglcnacglcnacman_man_manmanman_c":1.0,
"gdp_c":1.0,
"gdpmann_c":-1.0,
"h_c":1.0
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"lower_bound":0.0,
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"subsystem":"N-Glycan biosynthesis",
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"G12MT2"
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},
"annotation":{
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"G12MT2"
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"metanetx.reaction":[
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],
"sbo":"SBO:0000176"
}
},
{
"id":"AO",
"name":"Amine oxidase",
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"h2o_c":-1.0,
"h_c":1.0,
"hista_c":-1.0,
"im4act_c":1.0,
"nh4_c":1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CRv4_Au5_s13_g4519_t1",
"subsystem":"Histidine metabolism",
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"AO"
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},
"annotation":{
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"biocyc":[
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"ec-code":[
"1.4.3.22",
"1.4.3.6"
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"kegg.reaction":[
"R02150"
],
"metanetx.reaction":[
"MNXR95850"
],
"reactome.reaction":[
"R-ATH-5696131",
"R-HSA-5696131",
"R-MMU-5696131",
"R-CFA-5696131",
"R-SSC-5696131",
"R-BTA-5696131",
"R-XTR-5696131",
"R-SPO-5696131",
"R-GGA-5696131",
"R-DRE-5696131",
"R-RNO-5696131",
"R-OSA-5696131"
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"rhea":[
"25627",
"25628",
"25625",
"25626"
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"seed.reaction":[
"rxn01550"
]
}
},
{
"id":"G12MT3",
"name":"Alpha-1,2-mannosyltransferase (doldpglcnacglcnacman(manmanman)manmanman)",
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"doldpglcnacglcnacman_manman_manmanman_c":-1.0,
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"dolmanp_c":-1.0,
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"h_c":1.0
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"G12MT3"
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"G12MT3"
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],
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}
},
{
"id":"G12MT4",
"name":"Alpha-1,2-mannosyltransferase (doldpglcnacglcnacman(man(manman)manman)manmanman)",
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"doldpglcnacglcnacman_man_man_manman_manmanman_c":-1.0,
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"h_c":1.0
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"MNXR99776"
],
"sbo":"SBO:0000176"
}
},
{
"id":"G13MT",
"name":"Alpha-1,3-mannosyltransferase (doldpglcnacglcnacmanman)",
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],
"sbo":"SBO:0000176"
}
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{
"id":"G16MT",
"name":"Alpha-1,6-mannosyltransferase (doldpglcnacglcnacman(man)man)",
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{
"id":"GLCNACPT",
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"ump_c":1.0
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"sbo":"SBO:0000176"
}
},
{
"id":"GLCNACT",
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"lower_bound":0.0,
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{
"id":"HSTPT",
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"23745",
"23744",
"23746"
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},
{
"id":"AOOAh",
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"imacp_h":1.0
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"23746"
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},
{
"id":"HDC",
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"annotation":{
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"4.1.1.28"
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"kegg.reaction":[
"R01167"
],
"metanetx.reaction":[
"MNXR100581"
],
"reactome.reaction":[
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"R-ATH-977301",
"R-TGU-977301",
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"R-BTA-977301",
"R-XTR-977301",
"R-OSA-977301",
"R-CFA-977301",
"R-MMU-977301",
"R-HSA-977301",
"R-DRE-977301",
"R-RNO-977301",
"R-GGA-977301"
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"rhea":[
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"20841",
"20842",
"20840"
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"seed.reaction":[
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},
{
"id":"HDH",
"name":"Histidinol dehydrogenase, cytosol",
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"h_c":4.0,
"his__L_c":1.0,
"histd_c":-1.0,
"nad_c":-2.0,
"nadh_c":2.0
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"lower_bound":0.0,
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"annotation":{
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"HDH"
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"1.1.1.23"
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"R01158"
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"20642",
"20643",
"20644"
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},
{
"id":"HDHh",
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"histd_h":-1.0,
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"nadh_h":2.0
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"1.1.1.23"
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"20643",
"20644"
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},
{
"id":"MG1A",
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{
"id":"MG1B",
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"annotation":{
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}
},
{
"id":"AMITP",
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"mi145p_c":-1.0
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}
},
{
"id":"MG2A",
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"lower_bound":0.0,
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},
{
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{
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"r5p_h":-1.0
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"27516"
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}