{
"metabolites":[
{
"id":"dhf_c",
"name":"7,8-Dihydrofolate",
"compartment":"c",
"charge":-2,
"formula":"C19H19N7O6",
"notes":{
"original_bigg_ids":[
"dhf_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhf"
],
"biocyc":[
"META:DIHYDROFOLATE"
],
"chebi":[
"CHEBI:42000",
"CHEBI:15633",
"CHEBI:12245",
"CHEBI:20768",
"CHEBI:57451",
"CHEBI:14150",
"CHEBI:4564"
],
"hmdb":[
"HMDB01056"
],
"inchi_key":[
"OZRNSSUDZOLUSN-LBPRGKRZSA-L"
],
"kegg.compound":[
"C00415"
],
"metanetx.chemical":[
"MNXM281"
],
"reactome.compound":[
"73604"
],
"sabiork":[
"1336"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00330"
]
}
},
{
"id":"dudp_c",
"name":"DUDP C9H11N2O11P2",
"compartment":"c",
"charge":-3,
"formula":"C9H11N2O11P2",
"notes":{
"original_bigg_ids":[
"dudp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dudp"
],
"biocyc":[
"META:DUDP"
],
"chebi":[
"CHEBI:60471",
"CHEBI:19262",
"CHEBI:10531",
"CHEBI:28850"
],
"hmdb":[
"HMDB01000"
],
"inchi_key":[
"QHWZTVCCBMIIKE-SHYZEUOFSA-K"
],
"kegg.compound":[
"C01346"
],
"metanetx.chemical":[
"MNXM572"
],
"sabiork":[
"1714"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00978"
]
}
},
{
"id":"3omrsACP_c",
"name":"3-Oxotetradecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C14H25O2SR",
"notes":{
"original_bigg_ids":[
"3omrsACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3omrsACP"
],
"biocyc":[
"META:3-oxo-myristoyl-ACPs"
],
"chebi":[
"CHEBI:1655"
],
"kegg.compound":[
"C05759"
],
"lipidmaps":[
"LMFA07060017"
],
"metanetx.chemical":[
"MNXM26095"
],
"sabiork":[
"8119"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11491"
]
}
},
{
"id":"trnaglu_c",
"name":"TRNA (Glu)",
"compartment":"c",
"charge":0,
"formula":"C15H21N5O10PR",
"notes":{
"original_bigg_ids":[
"trnaglu_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaglu"
],
"biocyc":[
"META:GLT-tRNAs"
],
"chebi":[
"CHEBI:15175",
"CHEBI:29175",
"CHEBI:10680"
],
"kegg.compound":[
"C01641"
],
"metanetx.chemical":[
"MNXM90886"
],
"reactome.compound":[
"379778",
"379754"
],
"sabiork":[
"3835"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11912"
]
}
},
{
"id":"pre6a_c",
"name":"Precorrin 6A",
"compartment":"c",
"charge":-7,
"formula":"C44H47N4O16",
"notes":{
"original_bigg_ids":[
"pre6a_c"
]
},
"annotation":{
"bigg.metabolite":[
"pre6a"
],
"biocyc":[
"META:CPD-675"
],
"chebi":[
"CHEBI:58513",
"CHEBI:77872",
"CHEBI:26225",
"CHEBI:27513",
"CHEBI:14875",
"CHEBI:8375"
],
"inchi_key":[
"SOHWQLUTRKYCGZ-YTMGQXKNSA-G"
],
"kegg.compound":[
"C06320"
],
"metanetx.chemical":[
"MNXM1496"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03761"
]
}
},
{
"id":"ametam_c",
"name":"S-Adenosylmethioninamine",
"compartment":"c",
"charge":2,
"formula":"C14H24N6O3S",
"notes":{
"original_bigg_ids":[
"ametam_c"
]
},
"annotation":{
"bigg.metabolite":[
"ametam"
],
"biocyc":[
"META:S-ADENOSYLMETHIONINAMINE"
],
"chebi":[
"CHEBI:22035",
"CHEBI:8947",
"CHEBI:12743",
"CHEBI:15625",
"CHEBI:12762",
"CHEBI:10906",
"CHEBI:57443"
],
"hmdb":[
"HMDB00988"
],
"inchi_key":[
"ZUNBITIXDCPNSD-LSRJEVITSA-O"
],
"kegg.compound":[
"C01137"
],
"metanetx.chemical":[
"MNXM321"
],
"sabiork":[
"5404"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00837"
]
}
},
{
"id":"3hhexACP_c",
"name":"(R)-3-Hydroxyhexanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C6H11O2SR",
"notes":{
"original_bigg_ids":[
"3hhexACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hhexACP"
],
"chebi":[
"CHEBI:326"
],
"kegg.compound":[
"C05747"
],
"lipidmaps":[
"LMFA07060006"
],
"metanetx.chemical":[
"MNXM25370"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11479"
]
}
},
{
"id":"4ppan_c",
"name":"D-4'-Phosphopantothenate",
"compartment":"c",
"charge":-3,
"formula":"C9H15NO8P",
"notes":{
"original_bigg_ids":[
"4ppan_c"
]
},
"annotation":{
"bigg.metabolite":[
"4ppan"
],
"biocyc":[
"META:4-P-PANTOTHENATE"
],
"chebi":[
"CHEBI:20891",
"CHEBI:15905",
"CHEBI:4082",
"CHEBI:12886",
"CHEBI:18702",
"CHEBI:10986"
],
"hmdb":[
"HMDB01016",
"HMDB62700"
],
"inchi_key":[
"XHFVGHPGDLDEQO-ZETCQYMHSA-K"
],
"kegg.compound":[
"C03492"
],
"metanetx.chemical":[
"MNXM415"
],
"reactome.compound":[
"196786"
],
"sabiork":[
"6663"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02201"
]
}
},
{
"id":"quln_c",
"name":"Quinolinate",
"compartment":"c",
"charge":-2,
"formula":"C7H3NO4",
"notes":{
"original_bigg_ids":[
"quln_c"
]
},
"annotation":{
"bigg.metabolite":[
"quln"
],
"biocyc":[
"META:QUINOLINATE"
],
"chebi":[
"CHEBI:14975",
"CHEBI:29959",
"CHEBI:46832",
"CHEBI:44529",
"CHEBI:8663",
"CHEBI:46828",
"CHEBI:46833",
"CHEBI:26418",
"CHEBI:132942",
"CHEBI:26417",
"CHEBI:16675"
],
"hmdb":[
"HMDB00232"
],
"inchi_key":[
"GJAWHXHKYYXBSV-UHFFFAOYSA-L"
],
"kegg.compound":[
"C03722"
],
"metanetx.chemical":[
"MNXM555"
],
"reactome.compound":[
"197238"
],
"sabiork":[
"6817"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02333"
]
}
},
{
"id":"frdp_c",
"name":"Farnesyl diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C15H25O7P2",
"notes":{
"original_bigg_ids":[
"frdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"frdp"
],
"biocyc":[
"META:FARNESYL-PP"
],
"chebi":[
"CHEBI:50277",
"CHEBI:19789",
"CHEBI:24016",
"CHEBI:12874",
"CHEBI:12854",
"CHEBI:10700",
"CHEBI:42496",
"CHEBI:175763",
"CHEBI:11488",
"CHEBI:11491",
"CHEBI:17407",
"CHEBI:14231"
],
"hmdb":[
"HMDB04201",
"HMDB00961"
],
"inchi_key":[
"VWFJDQUYCIWHTN-YFVJMOTDSA-K"
],
"kegg.compound":[
"C00448"
],
"lipidmaps":[
"LMPR0103010002"
],
"metanetx.chemical":[
"MNXM34"
],
"reactome.compound":[
"191385",
"2162257",
"4419987"
],
"sabiork":[
"5095"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00350"
]
}
},
{
"id":"glyald_c",
"name":"D-Glyceraldehyde",
"compartment":"c",
"charge":0,
"formula":"C3H6O3",
"notes":{
"original_bigg_ids":[
"glyald_c"
]
},
"annotation":{
"bigg.metabolite":[
"glyald"
],
"biocyc":[
"META:GLYCERALD"
],
"chebi":[
"CHEBI:17378",
"CHEBI:21025",
"CHEBI:4186",
"CHEBI:12982",
"CHEBI:39973"
],
"inchi_key":[
"MNQZXJOMYWMBOU-VKHMYHEASA-N"
],
"kegg.compound":[
"C00577"
],
"metanetx.chemical":[
"MNXM435"
],
"reactome.compound":[
"30393"
],
"sabiork":[
"1409"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00448"
]
}
},
{
"id":"uacgam_c",
"name":"UDP-N-acetyl-D-glucosamine",
"compartment":"c",
"charge":-2,
"formula":"C17H25N3O17P2",
"notes":{
"original_bigg_ids":[
"uacgam_c"
]
},
"annotation":{
"bigg.metabolite":[
"uacgam"
],
"biocyc":[
"META:UDP-N-ACETYL-D-GLUCOSAMINE"
],
"chebi":[
"CHEBI:13473",
"CHEBI:22115",
"CHEBI:9823",
"CHEBI:13475",
"CHEBI:13456",
"CHEBI:13476",
"CHEBI:46243",
"CHEBI:57705",
"CHEBI:46287",
"CHEBI:16264"
],
"hmdb":[
"HMDB00290",
"HMDB62760"
],
"inchi_key":[
"LFTYTUAZOPRMMI-CFRASDGPSA-L"
],
"kegg.compound":[
"C00043"
],
"kegg.glycan":[
"G10610"
],
"lipidmaps":[
"LMSL01010002"
],
"metanetx.chemical":[
"MNXM47"
],
"reactome.compound":[
"162756",
"914003",
"3499326"
],
"sabiork":[
"1925"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00037"
]
}
},
{
"id":"pram_c",
"name":"5-Phospho-beta-D-ribosylamine",
"compartment":"c",
"charge":-1,
"formula":"C5H11NO7P",
"notes":{
"original_bigg_ids":[
"pram_c"
]
},
"annotation":{
"bigg.metabolite":[
"pram"
],
"biocyc":[
"META:5-P-BETA-D-RIBOSYL-AMINE"
],
"chebi":[
"CHEBI:12161",
"CHEBI:37737",
"CHEBI:42834",
"CHEBI:2123",
"CHEBI:20626",
"CHEBI:58681"
],
"hmdb":[
"HMDB01128",
"HMDB02347",
"HMDB62576"
],
"inchi_key":[
"SKCBPEVYGOQGJN-TXICZTDVSA-M"
],
"kegg.compound":[
"C03090"
],
"metanetx.chemical":[
"MNXM90003"
],
"reactome.compound":[
"111292"
],
"sabiork":[
"1884"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01982"
]
}
},
{
"id":"26dap__M_c",
"name":"Meso-2,6-Diaminoheptanedioate",
"compartment":"c",
"charge":0,
"formula":"C7H14N2O4",
"notes":{
"original_bigg_ids":[
"26dap__M_c"
]
},
"annotation":{
"bigg.metabolite":[
"26dap__M"
],
"biocyc":[
"META:MESO-DIAMINOPIMELATE"
],
"chebi":[
"CHEBI:40838",
"CHEBI:12823",
"CHEBI:30308",
"CHEBI:57791",
"CHEBI:10598",
"CHEBI:25203",
"CHEBI:12825",
"CHEBI:12822",
"CHEBI:25204",
"CHEBI:16488"
],
"inchi_key":[
"GMKMEZVLHJARHF-SYDPRGILSA-N"
],
"kegg.compound":[
"C00680"
],
"metanetx.chemical":[
"MNXM529"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00516"
]
}
},
{
"id":"gdpmann_c",
"name":"GDP-D-mannose",
"compartment":"c",
"charge":-2,
"formula":"C16H23N5O16P2",
"notes":{
"original_bigg_ids":[
"gdpmann_c"
]
},
"annotation":{
"bigg.metabolite":[
"gdpmann"
],
"biocyc":[
"META:GDP-MANNOSE"
],
"chebi":[
"CHEBI:13328",
"CHEBI:5225",
"CHEBI:42729",
"CHEBI:84881",
"CHEBI:21159",
"CHEBI:57527",
"CHEBI:13333",
"CHEBI:84880",
"CHEBI:15820",
"CHEBI:13340"
],
"hmdb":[
"HMDB01163"
],
"inchi_key":[
"MVMSCBBUIHUTGJ-GDJBGNAASA-L"
],
"kegg.compound":[
"C00096"
],
"kegg.glycan":[
"G10614"
],
"metanetx.chemical":[
"MNXM82"
],
"sabiork":[
"1559",
"3925"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00083"
]
}
},
{
"id":"db4p_c",
"name":"3,4-dihydroxy-2-butanone 4-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C4H7O6P",
"notes":{
"original_bigg_ids":[
"db4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"db4p"
],
"chebi":[
"CHEBI:50606"
],
"inchi_key":[
"OKYHYXLCTGGOLM-UHFFFAOYSA-L"
],
"kegg.compound":[
"C15556"
],
"metanetx.chemical":[
"MNXM2323"
],
"sabiork":[
"23254"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11225"
]
}
},
{
"id":"neuspn_c",
"name":"Neurosporene",
"compartment":"c",
"charge":0,
"formula":"C40H58",
"notes":{
"original_bigg_ids":[
"norsp_c"
]
},
"annotation":{
"bigg.metabolite":[
"neuspn"
],
"biocyc":[
"META:NEUROSPORENE"
],
"chebi":[
"CHEBI:16833",
"CHEBI:14643",
"CHEBI:7541",
"CHEBI:25511"
],
"hmdb":[
"HMDB03114"
],
"inchi_key":[
"ATCICVFRSJQYDV-XILUKMICSA-N"
],
"kegg.compound":[
"C05431"
],
"lipidmaps":[
"LMPR01070086"
],
"metanetx.chemical":[
"MNXM949"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03216"
]
}
},
{
"id":"actACP_c",
"name":"Acetoacetyl-ACP",
"compartment":"c",
"charge":-1,
"formula":"C4H5O2RS",
"notes":{
"original_bigg_ids":[
"actACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"actACP"
],
"biocyc":[
"META:Acetoacetyl-ACPs",
"META:Acetoacetyl-ACP"
],
"chebi":[
"CHEBI:2393"
],
"kegg.compound":[
"C05744"
],
"metanetx.chemical":[
"MNXM1223"
],
"sabiork":[
"8104"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11488"
]
}
},
{
"id":"actp_c",
"name":"Acetyl phosphate",
"compartment":"c",
"charge":-2,
"formula":"C2H3O5P",
"notes":{
"original_bigg_ids":[
"actp_c"
]
},
"annotation":{
"bigg.metabolite":[
"actp"
],
"biocyc":[
"META:ACETYL-P"
],
"chebi":[
"CHEBI:13711",
"CHEBI:46262",
"CHEBI:15350",
"CHEBI:22191",
"CHEBI:2407"
],
"hmdb":[
"HMDB01494"
],
"inchi_key":[
"LIPOUNRJVLNBCD-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00227"
],
"metanetx.chemical":[
"MNXM280"
],
"sabiork":[
"1316"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00196"
]
}
},
{
"id":"ugmd_c",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate",
"compartment":"c",
"charge":-4,
"formula":"C35H51N7O26P2",
"notes":{
"original_bigg_ids":[
"ugmd_c"
]
},
"annotation":{
"bigg.metabolite":[
"ugmd"
],
"chebi":[
"CHEBI:9831",
"CHEBI:28639",
"CHEBI:13463",
"CHEBI:22124",
"CHEBI:58582",
"CHEBI:13460",
"CHEBI:13481",
"CHEBI:30905"
],
"inchi_key":[
"QUHLBZKCGUXHGP-AJVQVANPSA-J"
],
"metanetx.chemical":[
"MNXM162592"
],
"sabiork":[
"7640"
],
"sbo":"SBO:0000247"
}
},
{
"id":"s7p_c",
"name":"Sedoheptulose 7-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C7H13O10P",
"notes":{
"original_bigg_ids":[
"s7p_c"
]
},
"annotation":{
"bigg.metabolite":[
"s7p"
],
"biocyc":[
"META:D-SEDOHEPTULOSE-7-P"
],
"chebi":[
"CHEBI:4244",
"CHEBI:15073",
"CHEBI:15721",
"CHEBI:26621",
"CHEBI:9083",
"CHEBI:15074",
"CHEBI:57483"
],
"hmdb":[
"HMDB01068",
"HMDB62754"
],
"inchi_key":[
"JDTUMPKOJBQPKX-GBNDHIKLSA-L"
],
"kegg.compound":[
"C05382"
],
"metanetx.chemical":[
"MNXM271"
],
"reactome.compound":[
"29882"
],
"sabiork":[
"1618",
"1325"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00238"
]
}
},
{
"id":"cbm_c",
"name":"Carbamate",
"compartment":"c",
"charge":-1,
"formula":"CH2NO2",
"notes":{
"original_bigg_ids":[
"cbm_c"
]
},
"annotation":{
"bigg.metabolite":[
"cbm"
],
"biocyc":[
"META:CARBAMATE"
],
"chebi":[
"CHEBI:28616",
"CHEBI:13941",
"CHEBI:22504",
"CHEBI:23002",
"CHEBI:44573",
"CHEBI:3386"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/4297b4e6-4e7f-48f0-8c3a-e02ea29dcaaf",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2d1b772c-9a50-4104-bed9-6c9274b03e45"
],
"hmdb":[
"HMDB03551"
],
"inchi_key":[
"KXDHJXZQYSOELW-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01563"
],
"metanetx.chemical":[
"MNXM742"
],
"sabiork":[
"5666"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01101"
]
}
},
{
"id":"gam6p_c",
"name":"D-Glucosamine 6-phosphate",
"compartment":"c",
"charge":-1,
"formula":"C6H13NO8P",
"notes":{
"original_bigg_ids":[
"gam6p_c"
]
},
"annotation":{
"bigg.metabolite":[
"gam6p"
],
"biocyc":[
"META:D-GLUCOSAMINE-6-P"
],
"chebi":[
"CHEBI:12962",
"CHEBI:47987",
"CHEBI:58725"
],
"inchi_key":[
"XHMJOUIAFHJHBW-IVMDWMLBSA-M"
],
"kegg.compound":[
"C00352"
],
"metanetx.chemical":[
"MNXM370"
],
"sabiork":[
"1372"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00288"
]
}
},
{
"id":"co2_c",
"name":"CO2 CO2",
"compartment":"c",
"charge":0,
"formula":"CO2",
"notes":{
"original_bigg_ids":[
"co2_c"
]
},
"annotation":{
"bigg.metabolite":[
"co2"
],
"biocyc":[
"META:CARBON-DIOXIDE"
],
"chebi":[
"CHEBI:23011",
"CHEBI:3283",
"CHEBI:48829",
"CHEBI:16526",
"CHEBI:13283",
"CHEBI:13285",
"CHEBI:13284",
"CHEBI:13282"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2ec3da94-5f50-4525-81b1-5607c5c7a3d3",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/05f60af4-0a3f-4ead-9a29-33bb0f123379"
],
"hmdb":[
"HMDB01967"
],
"inchi_key":[
"CURLTUGMZLYLDI-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00011"
],
"kegg.drug":[
"D00004"
],
"metanetx.chemical":[
"MNXM13"
],
"reactome.compound":[
"29376",
"5668565",
"189480",
"1132345",
"113528",
"1237009",
"159751",
"389536",
"159942"
],
"sabiork":[
"1266"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00011"
]
}
},
{
"id":"cgly_c",
"name":"Cys Gly C5H10N2O3S",
"compartment":"c",
"charge":0,
"formula":"C5H10N2O3S",
"notes":{
"original_bigg_ids":[
"cgly_c"
]
},
"annotation":{
"bigg.metabolite":[
"cgly"
],
"biocyc":[
"META:CYS-GLY"
],
"chebi":[
"CHEBI:61694",
"CHEBI:4047"
],
"hmdb":[
"HMDB28775",
"HMDB00078"
],
"inchi_key":[
"ZUKPVRWZDMRIEO-VKHMYHEASA-N"
],
"kegg.compound":[
"C01419"
],
"metanetx.chemical":[
"MNXM683"
],
"reactome.compound":[
"1247934",
"1247904"
],
"sabiork":[
"2282"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01017"
]
}
},
{
"id":"zeax_c",
"name":"Zeaxanthin",
"compartment":"c",
"charge":0,
"formula":"C40H56O2",
"notes":{
"original_bigg_ids":[
"zeax_c"
]
},
"annotation":{
"bigg.metabolite":[
"zeax"
],
"biocyc":[
"META:CPD1F-130"
],
"chebi":[
"CHEBI:27547",
"CHEBI:10108",
"CHEBI:27361"
],
"hmdb":[
"HMDB02789"
],
"inchi_key":[
"JKQXZKUSFCKOGQ-QAYBQHTQSA-N"
],
"kegg.compound":[
"C06098"
],
"lipidmaps":[
"LMPR01070261"
],
"metanetx.chemical":[
"MNXM403"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03637"
]
}
},
{
"id":"h_cx",
"name":"H+",
"compartment":"cx",
"charge":1,
"formula":"H",
"notes":{
"original_bigg_ids":[
"h_cx"
]
},
"annotation":{
"bigg.metabolite":[
"h"
],
"biocyc":[
"META:PROTON"
],
"chebi":[
"CHEBI:5584",
"CHEBI:13357",
"CHEBI:15378",
"CHEBI:10744"
],
"hmdb":[
"HMDB59597"
],
"inchi_key":[
"GPRLSGONYQIRFK-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00080"
],
"metanetx.chemical":[
"MNXM1"
],
"reactome.compound":[
"2000349",
"425978",
"74722",
"428040",
"427899",
"428548",
"156540",
"70106",
"425969",
"1132304",
"5668577",
"1470067",
"163953",
"193465",
"113529",
"351626",
"425999",
"194688",
"374900",
"2872447",
"372511"
],
"sabiork":[
"39"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00067"
]
}
},
{
"id":"ptrc_c",
"name":"Putrescine",
"compartment":"c",
"charge":2,
"formula":"C4H14N2",
"notes":{
"original_bigg_ids":[
"ptrc_c"
]
},
"annotation":{
"bigg.metabolite":[
"ptrc"
],
"biocyc":[
"META:PUTRESCINE"
],
"chebi":[
"CHEBI:8650",
"CHEBI:17148",
"CHEBI:45092",
"CHEBI:26405",
"CHEBI:14972",
"CHEBI:326268"
],
"hmdb":[
"HMDB01414",
"HMDB60243"
],
"inchi_key":[
"KIDHWZJUCRJVML-UHFFFAOYSA-P"
],
"kegg.compound":[
"C00134"
],
"metanetx.chemical":[
"MNXM118"
],
"reactome.compound":[
"29610",
"141350"
],
"sabiork":[
"1941"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00118",
"cpd12215"
]
}
},
{
"id":"adp_c",
"name":"ADP C10H12N5O10P2",
"compartment":"c",
"charge":-3,
"formula":"C10H12N5O10P2",
"notes":{
"original_bigg_ids":[
"adp_c"
]
},
"annotation":{
"bigg.metabolite":[
"adp"
],
"biocyc":[
"META:ADP"
],
"chebi":[
"CHEBI:2342",
"CHEBI:16761",
"CHEBI:456216",
"CHEBI:40553",
"CHEBI:22244",
"CHEBI:87518",
"CHEBI:13222"
],
"hmdb":[
"HMDB01341"
],
"inchi_key":[
"XTWYTFMLZFPYCI-KQYNXXCUSA-K"
],
"kegg.compound":[
"C00008"
],
"kegg.glycan":[
"G11113"
],
"metanetx.chemical":[
"MNXM7"
],
"reactome.compound":[
"114565",
"211606",
"114564",
"6798177",
"5632457",
"5696026",
"8869360",
"29370",
"113581",
"113582"
],
"sabiork":[
"35"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00008"
]
}
},
{
"id":"achms_c",
"name":"O Acetyl L homoserine C6H11NO4",
"compartment":"c",
"charge":0,
"formula":"C6H11NO4",
"notes":{
"original_bigg_ids":[
"achms_c"
]
},
"annotation":{
"bigg.metabolite":[
"achms"
],
"biocyc":[
"META:CPD-667"
],
"chebi":[
"CHEBI:12709",
"CHEBI:21937",
"CHEBI:16288",
"CHEBI:7667",
"CHEBI:12684",
"CHEBI:57716"
],
"inchi_key":[
"FCXZBWSIAGGPCB-YFKPBYRVSA-N"
],
"kegg.compound":[
"C01077"
],
"metanetx.chemical":[
"MNXM699"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00790"
]
}
},
{
"id":"ncam_c",
"name":"Nicotinamide",
"compartment":"c",
"charge":0,
"formula":"C6H6N2O",
"notes":{
"original_bigg_ids":[
"ncam_c"
]
},
"annotation":{
"bigg.metabolite":[
"ncam"
],
"biocyc":[
"META:NIACINAMIDE"
],
"chebi":[
"CHEBI:14645",
"CHEBI:7556",
"CHEBI:25521",
"CHEBI:17154",
"CHEBI:44258"
],
"hmdb":[
"HMDB01406"
],
"inchi_key":[
"DFPAKSUCGFBDDF-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00153"
],
"kegg.drug":[
"D00036"
],
"metanetx.chemical":[
"MNXM216"
],
"reactome.compound":[
"197277",
"8870343"
],
"sabiork":[
"1949"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00133"
]
}
},
{
"id":"dutp_c",
"name":"DUTP C9H11N2O14P3",
"compartment":"c",
"charge":-4,
"formula":"C9H11N2O14P3",
"notes":{
"original_bigg_ids":[
"dutp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dutp"
],
"biocyc":[
"META:DUTP"
],
"chebi":[
"CHEBI:17625",
"CHEBI:14095",
"CHEBI:10533",
"CHEBI:61555",
"CHEBI:19264",
"CHEBI:58212"
],
"hmdb":[
"HMDB01191"
],
"inchi_key":[
"AHCYMLUZIRLXAA-SHYZEUOFSA-J"
],
"kegg.compound":[
"C00460"
],
"metanetx.chemical":[
"MNXM452"
],
"reactome.compound":[
"500739"
],
"sabiork":[
"1680"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00358"
]
}
},
{
"id":"3a2oxpp_c",
"name":"3-Amino-2-oxopropyl phosphate",
"compartment":"c",
"charge":-1,
"formula":"C3H7NO5P",
"notes":{
"original_bigg_ids":[
"3a2oxpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"3a2oxpp"
],
"sbo":"SBO:0000247"
}
},
{
"id":"aspsa_c",
"name":"L-Aspartate 4-semialdehyde",
"compartment":"c",
"charge":0,
"formula":"C4H7NO3",
"notes":{
"original_bigg_ids":[
"aspsa_c"
]
},
"annotation":{
"bigg.metabolite":[
"aspsa"
],
"biocyc":[
"META:L-ASPARTATE-SEMIALDEHYDE"
],
"chebi":[
"CHEBI:40847",
"CHEBI:18051",
"CHEBI:13087",
"CHEBI:13086",
"CHEBI:21245",
"CHEBI:6194",
"CHEBI:537519"
],
"hmdb":[
"HMDB12249"
],
"inchi_key":[
"HOSWPDPVFBCLSY-VKHMYHEASA-N"
],
"kegg.compound":[
"C00441"
],
"metanetx.chemical":[
"MNXM361"
],
"sabiork":[
"2052"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00346"
]
}
},
{
"id":"paps_c",
"name":"3'-Phosphoadenylyl sulfate",
"compartment":"c",
"charge":-4,
"formula":"C10H11N5O13P2S",
"notes":{
"original_bigg_ids":[
"paps_c"
]
},
"annotation":{
"bigg.metabolite":[
"paps"
],
"biocyc":[
"META:PAPS"
],
"chebi":[
"CHEBI:17980",
"CHEBI:11680",
"CHEBI:19857",
"CHEBI:11679",
"CHEBI:58339",
"CHEBI:1353"
],
"hmdb":[
"HMDB01134",
"HMDB62646"
],
"inchi_key":[
"GACDQMDRPRGCTN-KQYNXXCUSA-J"
],
"kegg.compound":[
"C00053"
],
"metanetx.chemical":[
"MNXM49"
],
"reactome.compound":[
"741440",
"158471"
],
"sabiork":[
"1776"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00044"
]
}
},
{
"id":"tdec2eACP_c",
"name":"Trans-Dec-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C10H17OSR",
"notes":{
"original_bigg_ids":[
"tdec2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"tdec2eACP"
],
"chebi":[
"CHEBI:10724"
],
"kegg.compound":[
"C05754"
],
"lipidmaps":[
"LMFA07060012"
],
"metanetx.chemical":[
"MNXM28221"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11475"
]
}
},
{
"id":"phom_c",
"name":"O-Phospho-L-homoserine",
"compartment":"c",
"charge":-2,
"formula":"C4H8NO6P",
"notes":{
"original_bigg_ids":[
"phom_c"
]
},
"annotation":{
"bigg.metabolite":[
"phom"
],
"biocyc":[
"META:O-PHOSPHO-L-HOMOSERINE"
],
"chebi":[
"CHEBI:21965",
"CHEBI:7691",
"CHEBI:15961",
"CHEBI:57590",
"CHEBI:12717",
"CHEBI:12693"
],
"hmdb":[
"HMDB03484",
"HMDB06495",
"HMDB62692"
],
"inchi_key":[
"FXDNYOANAXWZHG-VKHMYHEASA-L"
],
"kegg.compound":[
"C01102"
],
"metanetx.chemical":[
"MNXM1334"
],
"sabiork":[
"2246"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00809"
]
}
},
{
"id":"amylose_c",
"name":"Amylose",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"amylose_c"
]
},
"annotation":{
"bigg.metabolite":[
"amylose"
],
"sbo":"SBO:0000247"
}
},
{
"id":"mg2_c",
"name":"Magnesium",
"compartment":"c",
"charge":2,
"formula":"Mg",
"notes":{
"original_bigg_ids":[
"mg2_c"
]
},
"annotation":{
"bigg.metabolite":[
"mg2"
],
"biocyc":[
"META:MG+2"
],
"chebi":[
"CHEBI:6635",
"CHEBI:18420",
"CHEBI:13379",
"CHEBI:39127",
"CHEBI:25112",
"CHEBI:49736"
],
"hmdb":[
"HMDB00547"
],
"inchi_key":[
"JLVVSXFLKOJNIY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00305"
],
"metanetx.chemical":[
"MNXM653"
],
"reactome.compound":[
"29926",
"114632",
"5336432",
"109496"
],
"sabiork":[
"1327"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00254"
]
}
},
{
"id":"5mdr1p_c",
"name":"5-Methylthio-5-deoxy-D-ribose 1-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O7PS",
"notes":{
"original_bigg_ids":[
"5mdr1p_c"
]
},
"annotation":{
"bigg.metabolite":[
"5mdr1p"
],
"biocyc":[
"META:CPD-444"
],
"chebi":[
"CHEBI:20614",
"CHEBI:12769",
"CHEBI:12767",
"CHEBI:20616",
"CHEBI:30310",
"CHEBI:30311",
"CHEBI:58533",
"CHEBI:2102",
"CHEBI:27859",
"CHEBI:12770",
"CHEBI:30309"
],
"inchi_key":[
"JTFITTQBRJDSTL-KVTDHHQDSA-L"
],
"kegg.compound":[
"C04188"
],
"metanetx.chemical":[
"MNXM407"
],
"reactome.compound":[
"1237165"
],
"sabiork":[
"1642"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02574",
"cpd29669"
]
}
},
{
"id":"hdeACP_c",
"name":"Cis-hexadec-9-enoyl-[acyl-carrier protein] (n-C16:1)",
"compartment":"c",
"charge":-1,
"formula":"C16H29OSR",
"notes":{
"original_bigg_ids":[
"hdeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"hdeACP"
],
"metanetx.chemical":[
"MNXM89949"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pcox_u",
"name":"Plastocyanin(Cu2+)",
"compartment":"u",
"charge":1,
"formula":"R",
"notes":{
"original_bigg_ids":[
"pccu2p_u"
]
},
"annotation":{
"bigg.metabolite":[
"pcox"
],
"metanetx.chemical":[
"MNXM145922"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30035"
]
}
},
{
"id":"rb15bp_cx",
"name":"D-Ribulose 1,5-bisphosphate",
"compartment":"cx",
"charge":-4,
"formula":"C5H8O11P2",
"notes":{
"original_bigg_ids":[
"rb15bp_cx"
]
},
"annotation":{
"bigg.metabolite":[
"rb15bp"
],
"biocyc":[
"META:D-RIBULOSE-15-P2"
],
"chebi":[
"CHEBI:21087",
"CHEBI:57870",
"CHEBI:13017",
"CHEBI:4242",
"CHEBI:16710",
"CHEBI:45480"
],
"inchi_key":[
"YAHZABJORDUQGO-NQXXGFSBSA-J"
],
"kegg.compound":[
"C01182"
],
"metanetx.chemical":[
"MNXM1276"
],
"sabiork":[
"1502"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00871"
]
}
},
{
"id":"o2_c",
"name":"O2 O2",
"compartment":"c",
"charge":0,
"formula":"O2",
"notes":{
"original_bigg_ids":[
"o2_c"
]
},
"annotation":{
"bigg.metabolite":[
"o2"
],
"biocyc":[
"META:OXYGEN-MOLECULE"
],
"chebi":[
"CHEBI:7860",
"CHEBI:26689",
"CHEBI:29097",
"CHEBI:15379",
"CHEBI:13416",
"CHEBI:27140",
"CHEBI:29793",
"CHEBI:30491",
"CHEBI:44742",
"CHEBI:23833",
"CHEBI:25366",
"CHEBI:10745"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/d5d12248-82d3-4cf3-b7d0-2e3d096768b4"
],
"hmdb":[
"HMDB01377"
],
"inchi_key":[
"MYMOFIZGZYHOMD-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00007"
],
"kegg.drug":[
"D00003"
],
"metanetx.chemical":[
"MNXM4"
],
"reactome.compound":[
"113534",
"113535",
"113685",
"5668566",
"189461",
"113533",
"1131511",
"352327",
"351593",
"29368",
"1236709"
],
"sabiork":[
"1264"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00007"
]
}
},
{
"id":"bcryptox_c",
"name":"Beta-Cryptoxanthin",
"compartment":"c",
"charge":0,
"formula":"C40H56O",
"notes":{
"original_bigg_ids":[
"bcryptox_c"
]
},
"annotation":{
"bigg.metabolite":[
"bcryptox"
],
"biocyc":[
"META:CPD-7409"
],
"chebi":[
"CHEBI:10362"
],
"hmdb":[
"HMDB33844"
],
"inchi_key":[
"DMASLKHVQRHNES-FKKUPVFPSA-N"
],
"kegg.compound":[
"C08591"
],
"lipidmaps":[
"LMPR01070269"
],
"metanetx.chemical":[
"MNXM1541"
],
"sabiork":[
"10683"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd05498"
]
}
},
{
"id":"spmd_c",
"name":"Spermidine",
"compartment":"c",
"charge":3,
"formula":"C7H22N3",
"notes":{
"original_bigg_ids":[
"spmd_c"
]
},
"annotation":{
"bigg.metabolite":[
"spmd"
],
"biocyc":[
"META:SPERMIDINE"
],
"chebi":[
"CHEBI:57834",
"CHEBI:15097",
"CHEBI:26732",
"CHEBI:26733",
"CHEBI:9218",
"CHEBI:45647",
"CHEBI:15095",
"CHEBI:16610"
],
"hmdb":[
"HMDB01257"
],
"inchi_key":[
"ATHGHQPFGPMSJY-UHFFFAOYSA-Q"
],
"kegg.compound":[
"C00315"
],
"metanetx.chemical":[
"MNXM124"
],
"reactome.compound":[
"204635",
"141324"
],
"sabiork":[
"3088"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00264"
]
}
},
{
"id":"anth_c",
"name":"Anthranilate",
"compartment":"c",
"charge":-1,
"formula":"C7H6NO2",
"notes":{
"original_bigg_ids":[
"anth_c"
]
},
"annotation":{
"bigg.metabolite":[
"anth"
],
"biocyc":[
"META:ANTHRANILATE"
],
"chebi":[
"CHEBI:30754",
"CHEBI:22575",
"CHEBI:16567",
"CHEBI:40980",
"CHEBI:22578",
"CHEBI:13841",
"CHEBI:22577",
"CHEBI:2757"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/ec511e59-d2cf-482d-ae9f-7f4dd74818c2"
],
"hmdb":[
"HMDB01123"
],
"inchi_key":[
"RWZYAGGXGHYGMB-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00108"
],
"metanetx.chemical":[
"MNXM188"
],
"sabiork":[
"5005"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00093"
]
}
},
{
"id":"udpsq_c",
"name":"UDP-6-sulfoquinovose",
"compartment":"c",
"charge":-3,
"formula":"C15H21N2O19P2S",
"notes":{
"original_bigg_ids":[
"udpsq_c"
]
},
"annotation":{
"bigg.metabolite":[
"udpsq"
],
"biocyc":[
"META:UDP-SULFOQUINOVOSE"
],
"chebi":[
"CHEBI:15855",
"CHEBI:9810",
"CHEBI:60009",
"CHEBI:13452"
],
"inchi_key":[
"FQANCGQCBCUSMI-JZMIEXBBSA-K"
],
"kegg.compound":[
"C11521"
],
"metanetx.chemical":[
"MNXM3379"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08358"
]
}
},
{
"id":"octe9ACP_c",
"name":"Cis-octadec-9-enoyl-[acyl-carrier protein] ((9Z)-n-C18:1)",
"compartment":"c",
"charge":-1,
"formula":"C18H33OSR",
"notes":{
"original_bigg_ids":[
"octe9ACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"octe9ACP"
],
"metanetx.chemical":[
"MNXM146128"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30416"
]
}
},
{
"id":"h2_c",
"name":"Hydrogen",
"compartment":"c",
"charge":0,
"formula":"H2",
"notes":{
"original_bigg_ids":[
"h2_c"
]
},
"annotation":{
"bigg.metabolite":[
"h2"
],
"biocyc":[
"META:HYDROGEN-MOLECULE"
],
"chebi":[
"CHEBI:18276",
"CHEBI:29298",
"CHEBI:29299",
"CHEBI:13350",
"CHEBI:29294",
"CHEBI:25363",
"CHEBI:5785"
],
"hmdb":[
"HMDB01362"
],
"inchi_key":[
"UFHFLCQGNIYNRP-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00282"
],
"metanetx.chemical":[
"MNXM195"
],
"reactome.compound":[
"113555"
],
"sabiork":[
"5030"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11640"
]
}
},
{
"id":"dhpt_c",
"name":"Dihydropteroate",
"compartment":"c",
"charge":-1,
"formula":"C14H13N6O3",
"notes":{
"original_bigg_ids":[
"dhpt_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhpt"
],
"biocyc":[
"META:7-8-DIHYDROPTEROATE"
],
"chebi":[
"CHEBI:23762",
"CHEBI:17839",
"CHEBI:14160",
"CHEBI:4581"
],
"hmdb":[
"HMDB01412"
],
"inchi_key":[
"WBFYVDCHGVNRBH-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00921"
],
"metanetx.chemical":[
"MNXM722728"
],
"sabiork":[
"5318"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd28675",
"cpd00683",
"cpd28673"
]
}
},
{
"id":"adocbip_c",
"name":"Adenosyl cobinamide phosphate",
"compartment":"c",
"charge":-1,
"formula":"C58CoH83N16O14P",
"notes":{
"original_bigg_ids":[
"adocbip_c"
]
},
"annotation":{
"bigg.metabolite":[
"adocbip"
],
"biocyc":[
"META:ADENOSYLCOBINAMIDE-P"
],
"chebi":[
"CHEBI:2481",
"CHEBI:58502"
],
"hmdb":[
"HMDB12184"
],
"inchi_key":[
"MQCMBMUJJHSGIF-QMUWONGRSA-K"
],
"kegg.compound":[
"C06509"
],
"metanetx.chemical":[
"MNXM856"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03919"
]
}
},
{
"id":"fdp_c",
"name":"D-Fructose 1,6-bisphosphate",
"compartment":"c",
"charge":-4,
"formula":"C6H10O12P2",
"notes":{
"original_bigg_ids":[
"fdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"fdp"
],
"chebi":[
"CHEBI:37736",
"CHEBI:49299"
],
"inchi_key":[
"RNBGYGVWRKECFJ-VRPWFDPXSA-J"
],
"kegg.compound":[
"C00354"
],
"metanetx.chemical":[
"MNXM417"
],
"sabiork":[
"1465"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00290"
]
}
},
{
"id":"phycy_c",
"name":"(3Z)-Phycocyanobilin",
"compartment":"c",
"charge":-2,
"formula":"C33H36N4O6",
"notes":{
"original_bigg_ids":[
"phycy_c"
]
},
"annotation":{
"bigg.metabolite":[
"phycy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"thex2eACP_c",
"name":"Trans-Hex-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C6H9OSR",
"notes":{
"original_bigg_ids":[
"thex2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"thex2eACP"
],
"biocyc":[
"META:Hex-2-enoyl-ACPs"
],
"chebi":[
"CHEBI:10727"
],
"kegg.compound":[
"C05748"
],
"lipidmaps":[
"LMFA07060007"
],
"metanetx.chemical":[
"MNXM24502"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11473"
]
}
},
{
"id":"fmn_c",
"name":"FMN C17H19N4O9P",
"compartment":"c",
"charge":-3,
"formula":"C17H18N4O9P",
"notes":{
"original_bigg_ids":[
"fmn_c"
]
},
"annotation":{
"bigg.metabolite":[
"fmn"
],
"biocyc":[
"META:FMN"
],
"chebi":[
"CHEBI:58210",
"CHEBI:4960",
"CHEBI:42587",
"CHEBI:17621",
"CHEBI:21127",
"CHEBI:13317"
],
"hmdb":[
"HMDB01520"
],
"inchi_key":[
"ANKZYBDXHMZBDK-SCRDCRAPSA-K"
],
"kegg.compound":[
"C00061"
],
"metanetx.chemical":[
"MNXM119"
],
"reactome.compound":[
"73524"
],
"sabiork":[
"1673"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00050"
]
}
},
{
"id":"Ncbmpts_c",
"name":"N-Carbamoylputrescine",
"compartment":"c",
"charge":1,
"formula":"C5H14N3O",
"notes":{
"original_bigg_ids":[
"cbmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"Ncbmpts"
],
"biocyc":[
"META:CPD-597"
],
"chebi":[
"CHEBI:58318",
"CHEBI:12497",
"CHEBI:21691",
"CHEBI:7258",
"CHEBI:17902",
"CHEBI:12594"
],
"hmdb":[
"HMDB33458"
],
"inchi_key":[
"YANFYYGANIYHGI-UHFFFAOYSA-O"
],
"kegg.compound":[
"C00436"
],
"metanetx.chemical":[
"MNXM1243"
],
"sabiork":[
"5093"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00341"
]
}
},
{
"id":"pppi_c",
"name":"Inorganic triphosphate",
"compartment":"c",
"charge":-4,
"formula":"HO10P3",
"notes":{
"original_bigg_ids":[
"pppi_c"
]
},
"annotation":{
"bigg.metabolite":[
"pppi"
],
"biocyc":[
"META:P3I"
],
"chebi":[
"CHEBI:48315",
"CHEBI:39949",
"CHEBI:29203",
"CHEBI:9744",
"CHEBI:48316",
"CHEBI:39942",
"CHEBI:48314",
"CHEBI:18036",
"CHEBI:5926",
"CHEBI:48313"
],
"hmdb":[
"HMDB12282",
"HMDB03379"
],
"inchi_key":[
"UNXRWKVEANCORM-UHFFFAOYSA-I"
],
"kegg.compound":[
"C00536"
],
"metanetx.chemical":[
"MNXM332"
],
"sabiork":[
"1681",
"5073"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11672",
"cpd00421"
]
}
},
{
"id":"agm_c",
"name":"Agmatine",
"compartment":"c",
"charge":2,
"formula":"C5H16N4",
"notes":{
"original_bigg_ids":[
"agm_c"
]
},
"annotation":{
"bigg.metabolite":[
"agm"
],
"biocyc":[
"META:AGMATHINE"
],
"chebi":[
"CHEBI:17431",
"CHEBI:2514",
"CHEBI:18576",
"CHEBI:13747",
"CHEBI:58145",
"CHEBI:40556"
],
"hmdb":[
"HMDB60259",
"HMDB01432"
],
"inchi_key":[
"QYPPJABKJHAVHS-UHFFFAOYSA-P"
],
"kegg.compound":[
"C00179"
],
"metanetx.chemical":[
"MNXM328"
],
"reactome.compound":[
"351164"
],
"sabiork":[
"4059"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00152"
]
}
},
{
"id":"5caiz_c",
"name":"5-phosphoribosyl-5-carboxyaminoimidazole",
"compartment":"c",
"charge":-3,
"formula":"C9H11N3O9P",
"notes":{
"original_bigg_ids":[
"5caiz_c"
]
},
"annotation":{
"bigg.metabolite":[
"5caiz"
],
"biocyc":[
"META:CPD0-181"
],
"chebi":[
"CHEBI:48000",
"CHEBI:58730"
],
"hmdb":[
"HMDB12268"
],
"inchi_key":[
"JHLXDWGVSYMXPL-XVFCMESISA-K"
],
"kegg.compound":[
"C15667"
],
"metanetx.chemical":[
"MNXM1409"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd25523",
"cpd11310"
]
}
},
{
"id":"nadh_c",
"name":"Nicotinamide adenine dinucleotide - reduced",
"compartment":"c",
"charge":-2,
"formula":"C21H27N7O14P2",
"notes":{
"original_bigg_ids":[
"nadh_c"
]
},
"annotation":{
"bigg.metabolite":[
"nadh"
],
"biocyc":[
"META:NADH"
],
"chebi":[
"CHEBI:13395",
"CHEBI:21902",
"CHEBI:7423",
"CHEBI:44216",
"CHEBI:57945",
"CHEBI:16908",
"CHEBI:13396"
],
"hmdb":[
"HMDB01487"
],
"inchi_key":[
"BOPGDPNILDQYTO-NNYOXOHSSA-L"
],
"kegg.compound":[
"C00004"
],
"metanetx.chemical":[
"MNXM10"
],
"reactome.compound":[
"192305",
"73473",
"29362",
"194697"
],
"sabiork":[
"38"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00004"
]
}
},
{
"id":"udp_c",
"name":"UDP C9H11N2O12P2",
"compartment":"c",
"charge":-3,
"formula":"C9H11N2O12P2",
"notes":{
"original_bigg_ids":[
"udp_c"
]
},
"annotation":{
"bigg.metabolite":[
"udp"
],
"biocyc":[
"META:UDP"
],
"chebi":[
"CHEBI:13445",
"CHEBI:9802",
"CHEBI:58223",
"CHEBI:46402",
"CHEBI:17659",
"CHEBI:27230"
],
"hmdb":[
"HMDB00295"
],
"inchi_key":[
"XCCTYIAWTASOJW-XVFCMESISA-K"
],
"kegg.compound":[
"C00015"
],
"kegg.glycan":[
"G10619"
],
"metanetx.chemical":[
"MNXM17"
],
"reactome.compound":[
"110096",
"111814",
"205687",
"158602"
],
"sabiork":[
"1269"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00014"
]
}
},
{
"id":"aps_c",
"name":"Adenosine 5'-phosphosulfate",
"compartment":"c",
"charge":-2,
"formula":"C10H12N5O10PS",
"notes":{
"original_bigg_ids":[
"aps_c"
]
},
"annotation":{
"bigg.metabolite":[
"aps"
],
"biocyc":[
"META:APS"
],
"chebi":[
"CHEBI:22247",
"CHEBI:58243",
"CHEBI:13743",
"CHEBI:2486",
"CHEBI:13741",
"CHEBI:12059",
"CHEBI:17709",
"CHEBI:40562"
],
"hmdb":[
"HMDB01003"
],
"inchi_key":[
"IRLPACMLTUPBCL-KQYNXXCUSA-L"
],
"kegg.compound":[
"C00224"
],
"metanetx.chemical":[
"MNXM287"
],
"reactome.compound":[
"174370"
],
"sabiork":[
"1803"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00193"
]
}
},
{
"id":"cit_c",
"name":"Citrate",
"compartment":"c",
"charge":-3,
"formula":"C6H5O7",
"notes":{
"original_bigg_ids":[
"cit_c"
]
},
"annotation":{
"bigg.metabolite":[
"cit"
],
"biocyc":[
"META:CIT"
],
"chebi":[
"CHEBI:35802",
"CHEBI:133748",
"CHEBI:35809",
"CHEBI:76049",
"CHEBI:41523",
"CHEBI:35810",
"CHEBI:30769",
"CHEBI:13999",
"CHEBI:23322",
"CHEBI:35808",
"CHEBI:42563",
"CHEBI:16947",
"CHEBI:132362",
"CHEBI:35804",
"CHEBI:23321",
"CHEBI:3727",
"CHEBI:35806"
],
"hmdb":[
"HMDB00094"
],
"inchi_key":[
"KRKNYBCHXYNGOX-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00158"
],
"kegg.drug":[
"D00037"
],
"metanetx.chemical":[
"MNXM131"
],
"reactome.compound":[
"29654",
"433138",
"76190"
],
"sabiork":[
"1952"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00137"
]
}
},
{
"id":"pep_c",
"name":"Phosphoenolpyruvate",
"compartment":"c",
"charge":-3,
"formula":"C3H2O6P",
"notes":{
"original_bigg_ids":[
"pep_c"
]
},
"annotation":{
"bigg.metabolite":[
"pep"
],
"biocyc":[
"META:PHOSPHO-ENOL-PYRUVATE"
],
"chebi":[
"CHEBI:18021",
"CHEBI:44894",
"CHEBI:26054",
"CHEBI:14812",
"CHEBI:26055",
"CHEBI:8147",
"CHEBI:58702",
"CHEBI:44897"
],
"hmdb":[
"HMDB00263"
],
"inchi_key":[
"DTBNBXWJWCWCIK-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00074"
],
"metanetx.chemical":[
"MNXM73"
],
"reactome.compound":[
"372364",
"29492"
],
"sabiork":[
"32"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00061"
]
}
},
{
"id":"dpcoa_c",
"name":"Dephospho-CoA",
"compartment":"c",
"charge":-2,
"formula":"C21H33N7O13P2S",
"notes":{
"original_bigg_ids":[
"dpcoa_c"
]
},
"annotation":{
"bigg.metabolite":[
"dpcoa"
],
"biocyc":[
"META:DEPHOSPHO-COA"
],
"chebi":[
"CHEBI:14124",
"CHEBI:41614",
"CHEBI:23642",
"CHEBI:15468",
"CHEBI:11793",
"CHEBI:57328",
"CHEBI:4436"
],
"hmdb":[
"HMDB01373"
],
"inchi_key":[
"KDTSHFARGAKYJN-IBOSZNHHSA-L"
],
"kegg.compound":[
"C00882"
],
"lipidmaps":[
"LMFA07050315"
],
"metanetx.chemical":[
"MNXM481"
],
"reactome.compound":[
"196778"
],
"sabiork":[
"27337",
"1400"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00655"
]
}
},
{
"id":"coa_c",
"name":"Coenzyme A",
"compartment":"c",
"charge":-4,
"formula":"C21H32N7O16P3S",
"notes":{
"original_bigg_ids":[
"coa_c"
]
},
"annotation":{
"bigg.metabolite":[
"coa"
],
"biocyc":[
"META:COA-GROUP",
"META:CO-A"
],
"chebi":[
"CHEBI:41631",
"CHEBI:41597",
"CHEBI:741566",
"CHEBI:23355",
"CHEBI:13295",
"CHEBI:13298",
"CHEBI:57287",
"CHEBI:15346",
"CHEBI:3771",
"CHEBI:13294"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/19310484-6aa5-4dcf-b1da-855a8c21ecfd"
],
"hmdb":[
"HMDB01423",
"HMDB62184"
],
"inchi_key":[
"RGJOEKWQDUBAIZ-IBOSZNHHSA-J"
],
"kegg.compound":[
"C00010"
],
"metanetx.chemical":[
"MNXM12"
],
"reactome.compound":[
"193514",
"162743",
"2485002",
"1678675",
"29374",
"76194",
"8939024"
],
"sabiork":[
"1265"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd22528",
"cpd00010"
]
}
},
{
"id":"acACP_c",
"name":"Acetyl-ACP",
"compartment":"c",
"charge":-1,
"formula":"C2H3ORS",
"notes":{
"original_bigg_ids":[
"acACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"acACP"
],
"biocyc":[
"META:ACETYL-ACP"
],
"chebi":[
"CHEBI:13713",
"CHEBI:2409",
"CHEBI:17093"
],
"kegg.compound":[
"C03939"
],
"metanetx.chemical":[
"MNXM1269"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11494"
]
}
},
{
"id":"xu5p__D_c",
"name":"D-Xylulose 5-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H9O8P",
"notes":{
"original_bigg_ids":[
"xu5p__D_c"
]
},
"annotation":{
"bigg.metabolite":[
"xu5p__D"
],
"biocyc":[
"META:XYLULOSE-5-PHOSPHATE"
],
"chebi":[
"CHEBI:13036",
"CHEBI:27354",
"CHEBI:4269",
"CHEBI:16332",
"CHEBI:57737",
"CHEBI:21121"
],
"hmdb":[
"HMDB06212",
"HMDB00868"
],
"inchi_key":[
"FNZLKVNUWIIPSJ-RFZPGFLSSA-L"
],
"kegg.compound":[
"C00231"
],
"metanetx.chemical":[
"MNXM186"
],
"reactome.compound":[
"29790"
],
"sabiork":[
"1317"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00198"
]
}
},
{
"id":"uama_c",
"name":"UDP-N-acetylmuramoyl-L-alanine",
"compartment":"c",
"charge":-3,
"formula":"C23H33N4O20P2",
"notes":{
"original_bigg_ids":[
"uama_c"
]
},
"annotation":{
"bigg.metabolite":[
"uama"
],
"biocyc":[
"META:CPD0-1456"
],
"chebi":[
"CHEBI:22123",
"CHEBI:57953",
"CHEBI:13478",
"CHEBI:84726",
"CHEBI:9830",
"CHEBI:83898",
"CHEBI:16932",
"CHEBI:13459"
],
"inchi_key":[
"NTMMCWJNQNKACG-KBKUWGQMSA-K"
],
"kegg.compound":[
"C01212"
],
"metanetx.chemical":[
"MNXM1953"
],
"sabiork":[
"2265"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29609",
"cpd00890"
]
}
},
{
"id":"no2_c",
"name":"Nitrite",
"compartment":"c",
"charge":-1,
"formula":"NO2",
"notes":{
"original_bigg_ids":[
"no2_c"
]
},
"annotation":{
"bigg.metabolite":[
"no2"
],
"biocyc":[
"META:NITRITE"
],
"chebi":[
"CHEBI:16301",
"CHEBI:14658",
"CHEBI:7585",
"CHEBI:44396",
"CHEBI:25567"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/84af9b8c-5f58-4093-85cb-964ba8ed40b7"
],
"hmdb":[
"HMDB02786"
],
"inchi_key":[
"IOVCWXUNBOPUCH-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00088"
],
"metanetx.chemical":[
"MNXM107"
],
"reactome.compound":[
"1222379"
],
"sabiork":[
"3058"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00075"
]
}
},
{
"id":"eig3p_c",
"name":"D-erythro-1-(Imidazol-4-yl)glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H9N2O6P",
"notes":{
"original_bigg_ids":[
"eig3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"eig3p"
],
"biocyc":[
"META:D-ERYTHRO-IMIDAZOLE-GLYCEROL-P"
],
"chebi":[
"CHEBI:12888",
"CHEBI:17805",
"CHEBI:4270",
"CHEBI:58278",
"CHEBI:20923"
],
"hmdb":[
"HMDB12208"
],
"inchi_key":[
"HFYBTHCYPKEDQQ-RITPCOANSA-L"
],
"kegg.compound":[
"C04666"
],
"metanetx.chemical":[
"MNXM1422"
],
"sabiork":[
"7476"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02843"
]
}
},
{
"id":"4hbz_c",
"name":"4-Hydroxybenzoate",
"compartment":"c",
"charge":-1,
"formula":"C7H5O3",
"notes":{
"original_bigg_ids":[
"4hbz_c"
]
},
"annotation":{
"bigg.metabolite":[
"4hbz"
],
"biocyc":[
"META:4-hydroxybenzoate"
],
"chebi":[
"CHEBI:20397",
"CHEBI:30763",
"CHEBI:1858",
"CHEBI:17879",
"CHEBI:44949",
"CHEBI:12003",
"CHEBI:20398"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/1811ddf5-ba98-40a5-949d-c660b8587741",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/9e05c7cc-e1b3-46a4-93ce-785c0dc04bfa",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/1cc87b2b-41db-4354-90b1-049369c47662"
],
"hmdb":[
"HMDB00500"
],
"inchi_key":[
"FJKROLUGYXJWQN-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00156"
],
"metanetx.chemical":[
"MNXM164"
],
"reactome.compound":[
"2162213"
],
"sabiork":[
"1951"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00136"
]
}
},
{
"id":"3odecACP_c",
"name":"3-Oxodecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C10H17O2SR",
"notes":{
"original_bigg_ids":[
"3odecACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3odecACP"
],
"biocyc":[
"META:3-oxo-decanoyl-ACPs"
],
"chebi":[
"CHEBI:1634"
],
"kegg.compound":[
"C05753"
],
"lipidmaps":[
"LMFA07060011"
],
"metanetx.chemical":[
"MNXM26616"
],
"sabiork":[
"8113"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11487"
]
}
},
{
"id":"dhnpt_c",
"name":"Dihydroneopterin",
"compartment":"c",
"charge":0,
"formula":"C9H13N5O4",
"notes":{
"original_bigg_ids":[
"dhnpt_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhnpt"
],
"biocyc":[
"META:DIHYDRO-NEO-PTERIN"
],
"chebi":[
"CHEBI:30567",
"CHEBI:11510",
"CHEBI:17001",
"CHEBI:44427",
"CHEBI:1001",
"CHEBI:19454"
],
"hmdb":[
"HMDB02275"
],
"inchi_key":[
"YQIFAMYNGGOTFB-XINAWCOVSA-N"
],
"kegg.compound":[
"C04874"
],
"metanetx.chemical":[
"MNXM162359"
],
"sabiork":[
"7637"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02961"
]
}
},
{
"id":"hgbam_c",
"name":"Hydrogenobyrinate a,c diamide",
"compartment":"c",
"charge":-4,
"formula":"C45H58N6O12",
"notes":{
"original_bigg_ids":[
"hgbam_c"
]
},
"annotation":{
"bigg.metabolite":[
"hgbam"
],
"biocyc":[
"META:CPD-688"
],
"chebi":[
"CHEBI:77874",
"CHEBI:5789",
"CHEBI:27914",
"CHEBI:24642",
"CHEBI:58536"
],
"inchi_key":[
"JJMDOVLPFPOLFZ-IPUCCYEASA-L"
],
"kegg.compound":[
"C06503"
],
"metanetx.chemical":[
"MNXM1022"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03913"
]
}
},
{
"id":"5aprbu_c",
"name":"5-Amino-6-(5'-phosphoribitylamino)uracil",
"compartment":"c",
"charge":-2,
"formula":"C9H15N4O9P",
"notes":{
"original_bigg_ids":[
"5aprbu_c"
]
},
"annotation":{
"bigg.metabolite":[
"5aprbu"
],
"biocyc":[
"META:CPD-1086"
],
"chebi":[
"CHEBI:2031",
"CHEBI:58421",
"CHEBI:12107",
"CHEBI:18247"
],
"hmdb":[
"HMDB03841"
],
"inchi_key":[
"RQRINYISXYAZKL-RPDRRWSUSA-L"
],
"kegg.compound":[
"C04454"
],
"metanetx.chemical":[
"MNXM1178"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02720"
]
}
},
{
"id":"3c4mop_c",
"name":"3-Carboxy-4-methyl-2-oxopentanoate",
"compartment":"c",
"charge":-2,
"formula":"C7H8O5",
"notes":{
"original_bigg_ids":[
"3c4mop_c"
]
},
"annotation":{
"bigg.metabolite":[
"3c4mop"
],
"biocyc":[
"META:CPD-7100"
],
"chebi":[
"CHEBI:17214",
"CHEBI:19975",
"CHEBI:11765",
"CHEBI:1467"
],
"hmdb":[
"HMDB12149"
],
"inchi_key":[
"HIIZAGQWABAMRR-BYPYZUCNSA-L"
],
"kegg.compound":[
"C04236"
],
"metanetx.chemical":[
"MNXM1602"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02605"
]
}
},
{
"id":"iasp_c",
"name":"Iminoaspartate",
"compartment":"c",
"charge":-2,
"formula":"C4H3NO4",
"notes":{
"original_bigg_ids":[
"iasp_c"
]
},
"annotation":{
"bigg.metabolite":[
"iasp"
],
"biocyc":[
"META:IMINOASPARTATE"
],
"chebi":[
"CHEBI:5878",
"CHEBI:77875",
"CHEBI:24784",
"CHEBI:50616",
"CHEBI:58831"
],
"hmdb":[
"HMDB01131"
],
"inchi_key":[
"NMUOATVLLQEYHI-UHFFFAOYSA-M"
],
"kegg.compound":[
"C05840"
],
"lipidmaps":[
"LMFA01170110"
],
"metanetx.chemical":[
"MNXM599"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03470"
]
}
},
{
"id":"nac_c",
"name":"Nicotinate",
"compartment":"c",
"charge":-1,
"formula":"C6H4NO2",
"notes":{
"original_bigg_ids":[
"nac_c"
]
},
"annotation":{
"bigg.metabolite":[
"nac"
],
"biocyc":[
"META:NIACINE"
],
"chebi":[
"CHEBI:7559",
"CHEBI:14650",
"CHEBI:32544",
"CHEBI:25538",
"CHEBI:25530",
"CHEBI:22851",
"CHEBI:44319",
"CHEBI:15940"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/ed8ac75f-3a91-484c-9d21-d318ef0efef6",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/ca85f0e1-e6b7-458b-8f88-d4ed6b580217"
],
"hmdb":[
"HMDB01488"
],
"inchi_key":[
"PVNIIMVLHYAWGP-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00253"
],
"kegg.drug":[
"D00049"
],
"metanetx.chemical":[
"MNXM274"
],
"reactome.compound":[
"8869604",
"197230"
],
"sabiork":[
"1994"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00218"
]
}
},
{
"id":"nmn_c",
"name":"NMN C11H14N2O8P",
"compartment":"c",
"charge":-1,
"formula":"C11H14N2O8P",
"notes":{
"original_bigg_ids":[
"nmn_c"
]
},
"annotation":{
"bigg.metabolite":[
"nmn"
],
"biocyc":[
"META:NICOTINAMIDE_NUCLEOTIDE"
],
"chebi":[
"CHEBI:14648",
"CHEBI:7557",
"CHEBI:14647",
"CHEBI:22850",
"CHEBI:16171",
"CHEBI:10433",
"CHEBI:13409",
"CHEBI:14649",
"CHEBI:18201",
"CHEBI:25522",
"CHEBI:12397",
"CHEBI:14646"
],
"hmdb":[
"HMDB00229",
"HMDB59645"
],
"inchi_key":[
"DAYLJWODMCOQEW-TURQNECASA-M"
],
"kegg.compound":[
"C00455"
],
"metanetx.chemical":[
"MNXM355"
],
"reactome.compound":[
"8869353",
"549282",
"8940067"
],
"sabiork":[
"3871"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00355"
]
}
},
{
"id":"lys__L_c",
"name":"L-Lysine",
"compartment":"c",
"charge":1,
"formula":"C6H15N2O2",
"notes":{
"original_bigg_ids":[
"lys__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"lys__L"
],
"biocyc":[
"META:LYS"
],
"chebi":[
"CHEBI:6264",
"CHEBI:32564",
"CHEBI:13135",
"CHEBI:32550",
"CHEBI:21351",
"CHEBI:18019",
"CHEBI:32552",
"CHEBI:32551",
"CHEBI:133538",
"CHEBI:32565",
"CHEBI:43950",
"CHEBI:32563",
"CHEBI:25094"
],
"hmdb":[
"HMDB03405",
"HMDB00182",
"HMDB62809"
],
"inchi_key":[
"KDXKERNSBIXSRK-YFKPBYRVSA-O"
],
"kegg.compound":[
"C00047",
"C16440"
],
"kegg.drug":[
"D02304"
],
"metanetx.chemical":[
"MNXM78"
],
"reactome.compound":[
"29444",
"351979",
"351991"
],
"sabiork":[
"22945",
"79"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19182",
"cpd00039"
]
}
},
{
"id":"bm_pigm_c",
"name":"Pigment component of biomass",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_pigm_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_pigm"
],
"sbo":"SBO:0000247"
}
},
{
"id":"2cpr5p_c",
"name":"1-(2-Carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C12H13NO9P",
"notes":{
"original_bigg_ids":[
"2cpr5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"2cpr5p"
],
"biocyc":[
"META:CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P"
],
"chebi":[
"CHEBI:11186",
"CHEBI:566",
"CHEBI:18959",
"CHEBI:565",
"CHEBI:29112",
"CHEBI:58613",
"CHEBI:28625"
],
"inchi_key":[
"QKMBYNRMPRKVTO-MNOVXSKESA-K"
],
"kegg.compound":[
"C01302"
],
"metanetx.chemical":[
"MNXM1455"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00956"
]
}
},
{
"id":"13dpg_c",
"name":"3-Phospho-D-glyceroyl phosphate",
"compartment":"c",
"charge":-4,
"formula":"C3H4O10P2",
"notes":{
"original_bigg_ids":[
"13dpg_c"
]
},
"annotation":{
"bigg.metabolite":[
"13dpg"
],
"biocyc":[
"META:DPG"
],
"chebi":[
"CHEBI:57604",
"CHEBI:20189",
"CHEBI:11881",
"CHEBI:16001",
"CHEBI:1658"
],
"hmdb":[
"HMDB62758"
],
"inchi_key":[
"LJQLQCAXBUHEAZ-UWTATZPHSA-J"
],
"kegg.compound":[
"C00236"
],
"metanetx.chemical":[
"MNXM261"
],
"reactome.compound":[
"29800"
],
"sabiork":[
"21215"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00203"
]
}
},
{
"id":"pchlld_c",
"name":"Protochlorophyllide",
"compartment":"c",
"charge":-1,
"formula":"C35H31MgN4O5",
"notes":{
"original_bigg_ids":[
"pchlld_c"
]
},
"annotation":{
"bigg.metabolite":[
"pchlld"
],
"biocyc":[
"META:MONO-VINYL-PROTOCHLOROPHYLLIDE-A"
],
"chebi":[
"CHEBI:26353",
"CHEBI:57855",
"CHEBI:14956",
"CHEBI:16673",
"CHEBI:83350",
"CHEBI:8587"
],
"hmdb":[
"HMDB31148"
],
"inchi_key":[
"SSIKFLKOTZKJAG-UAVVDGTISA-K"
],
"kegg.compound":[
"C02880"
],
"metanetx.chemical":[
"MNXM62503"
],
"sabiork":[
"2564"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01845"
]
}
},
{
"id":"gmp_c",
"name":"GMP C10H12N5O8P",
"compartment":"c",
"charge":-2,
"formula":"C10H12N5O8P",
"notes":{
"original_bigg_ids":[
"gmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"gmp"
],
"biocyc":[
"META:GMP"
],
"chebi":[
"CHEBI:24449",
"CHEBI:47450",
"CHEBI:58115",
"CHEBI:17345",
"CHEBI:29058",
"CHEBI:13341",
"CHEBI:42979",
"CHEBI:40119",
"CHEBI:42615",
"CHEBI:14381",
"CHEBI:24450",
"CHEBI:42892",
"CHEBI:5228",
"CHEBI:42831",
"CHEBI:42887",
"CHEBI:42647"
],
"hmdb":[
"HMDB01397"
],
"inchi_key":[
"RQFCJASXJCIDSX-UUOKFMHZSA-L"
],
"kegg.compound":[
"C00144"
],
"metanetx.chemical":[
"MNXM113"
],
"sabiork":[
"1309"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00126"
]
}
},
{
"id":"o2_u",
"name":"O2 O2",
"compartment":"u",
"charge":0,
"formula":"O2",
"notes":{
"original_bigg_ids":[
"o2_u"
]
},
"annotation":{
"bigg.metabolite":[
"o2"
],
"biocyc":[
"META:OXYGEN-MOLECULE"
],
"chebi":[
"CHEBI:7860",
"CHEBI:26689",
"CHEBI:29097",
"CHEBI:15379",
"CHEBI:13416",
"CHEBI:27140",
"CHEBI:29793",
"CHEBI:30491",
"CHEBI:44742",
"CHEBI:23833",
"CHEBI:25366",
"CHEBI:10745"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/d5d12248-82d3-4cf3-b7d0-2e3d096768b4"
],
"hmdb":[
"HMDB01377"
],
"inchi_key":[
"MYMOFIZGZYHOMD-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00007"
],
"kegg.drug":[
"D00003"
],
"metanetx.chemical":[
"MNXM4"
],
"reactome.compound":[
"113534",
"113535",
"113685",
"5668566",
"189461",
"113533",
"1131511",
"352327",
"351593",
"29368",
"1236709"
],
"sabiork":[
"1264"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00007"
]
}
},
{
"id":"ala__L_c",
"name":"L-Alanine",
"compartment":"c",
"charge":0,
"formula":"C3H7NO2",
"notes":{
"original_bigg_ids":[
"ala__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"ala__L"
],
"biocyc":[
"META:L-ALPHA-ALANINE"
],
"chebi":[
"CHEBI:21216",
"CHEBI:32440",
"CHEBI:2539",
"CHEBI:46308",
"CHEBI:40735",
"CHEBI:16977",
"CHEBI:22277",
"CHEBI:32439",
"CHEBI:57972",
"CHEBI:6171",
"CHEBI:16449",
"CHEBI:32431",
"CHEBI:32432",
"CHEBI:66916",
"CHEBI:40734",
"CHEBI:13069",
"CHEBI:76050",
"CHEBI:13748"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/d80739c7-acbe-4c00-8ea2-e3d19a191be2",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/1aad160f-1c5e-48e0-9473-6305321b31ed"
],
"hmdb":[
"HMDB00161",
"HMDB62251"
],
"inchi_key":[
"QNAYBMKLOCPYGJ-REOHCLBHSA-N"
],
"kegg.compound":[
"C01401",
"C00041"
],
"kegg.drug":[
"D00012"
],
"metanetx.chemical":[
"MNXM32"
],
"reactome.compound":[
"389664",
"352036",
"29432",
"379697"
],
"sabiork":[
"2280",
"67"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00035",
"cpd01003"
]
}
},
{
"id":"utp_c",
"name":"UTP C9H11N2O15P3",
"compartment":"c",
"charge":-4,
"formula":"C9H11N2O15P3",
"notes":{
"original_bigg_ids":[
"utp_c"
]
},
"annotation":{
"bigg.metabolite":[
"utp"
],
"biocyc":[
"META:UTP"
],
"chebi":[
"CHEBI:9850",
"CHEBI:46398",
"CHEBI:27233",
"CHEBI:57481",
"CHEBI:37567",
"CHEBI:13510",
"CHEBI:46397",
"CHEBI:15713"
],
"hmdb":[
"HMDB00285"
],
"inchi_key":[
"PGAVKCOVUIYSFO-XVFCMESISA-J"
],
"kegg.compound":[
"C00075"
],
"metanetx.chemical":[
"MNXM121"
],
"reactome.compound":[
"29494"
],
"sabiork":[
"1288"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00062"
]
}
},
{
"id":"r3mmal_c",
"name":"D-erythro-3-Methylmalate",
"compartment":"c",
"charge":-2,
"formula":"C5H6O5",
"notes":{
"original_bigg_ids":[
"r3mmal_c"
]
},
"annotation":{
"bigg.metabolite":[
"r3mmal"
],
"biocyc":[
"META:CPD-7066"
],
"chebi":[
"CHEBI:20924",
"CHEBI:4271",
"CHEBI:27394",
"CHEBI:58511"
],
"inchi_key":[
"NPYQJIHHTGFBLN-STHAYSLISA-L"
],
"kegg.compound":[
"C06032"
],
"metanetx.chemical":[
"MNXM2512"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03593",
"cpd24703"
]
}
},
{
"id":"3c2hmp_c",
"name":"3-Carboxy-2-hydroxy-4-methylpentanoate",
"compartment":"c",
"charge":-2,
"formula":"C7H10O5",
"notes":{
"original_bigg_ids":[
"3c2hmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"3c2hmp"
],
"biocyc":[
"META:2-D-THREO-HYDROXY-3-CARBOXY-ISOCAPROATE"
],
"chebi":[
"CHEBI:35120",
"CHEBI:20094",
"CHEBI:35121",
"CHEBI:15592",
"CHEBI:35122",
"CHEBI:35114",
"CHEBI:43468",
"CHEBI:11843",
"CHEBI:11760",
"CHEBI:43465",
"CHEBI:1565"
],
"hmdb":[
"HMDB12156"
],
"inchi_key":[
"RNQHMTFBUSSBJQ-CRCLSJGQSA-L"
],
"kegg.compound":[
"C04411"
],
"metanetx.chemical":[
"MNXM891"
],
"sabiork":[
"7292"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02693"
]
}
},
{
"id":"trdrd_c",
"name":"Reduced thioredoxin",
"compartment":"c",
"charge":0,
"formula":"XH2",
"notes":{
"original_bigg_ids":[
"trdrd_c"
]
},
"annotation":{
"bigg.metabolite":[
"trdrd"
],
"biocyc":[
"META:Red-Thioredoxin"
],
"chebi":[
"CHEBI:15033"
],
"kegg.compound":[
"C00342"
],
"metanetx.chemical":[
"MNXM96993"
],
"reactome.compound":[
"2142774"
],
"sabiork":[
"2803",
"1330"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11421",
"cpd28060"
]
}
},
{
"id":"pyr_c",
"name":"Pyruvate",
"compartment":"c",
"charge":-1,
"formula":"C3H3O3",
"notes":{
"original_bigg_ids":[
"pyr_c"
]
},
"annotation":{
"bigg.metabolite":[
"pyr"
],
"biocyc":[
"META:PYRUVATE"
],
"chebi":[
"CHEBI:26462",
"CHEBI:26466",
"CHEBI:8685",
"CHEBI:32816",
"CHEBI:45253",
"CHEBI:14987",
"CHEBI:15361"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/ccc99777-54dc-42d4-a97e-009b780d3905",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/dc01020e-8c7e-4087-9f56-cf8c962b7437"
],
"hmdb":[
"HMDB00243"
],
"inchi_key":[
"LCTONWCANYUPML-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00022"
],
"lipidmaps":[
"LMFA01060077"
],
"metanetx.chemical":[
"MNXM23"
],
"reactome.compound":[
"1130930",
"5357717",
"113557",
"29398",
"389680"
],
"sabiork":[
"33"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00020"
]
}
},
{
"id":"so4_c",
"name":"Sulfate",
"compartment":"c",
"charge":-2,
"formula":"O4S",
"notes":{
"original_bigg_ids":[
"so4_c"
]
},
"annotation":{
"bigg.metabolite":[
"so4"
],
"biocyc":[
"META:SULFATE",
"META:HSO4"
],
"chebi":[
"CHEBI:15135",
"CHEBI:45693",
"CHEBI:29199",
"CHEBI:9335",
"CHEBI:16189",
"CHEBI:45687",
"CHEBI:26836",
"CHEBI:45696"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/cf4fcd19-f2cb-4d92-aa67-323762e3b269"
],
"hmdb":[
"HMDB01448"
],
"inchi_key":[
"QAOWNCQODCNURD-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00059"
],
"kegg.drug":[
"D05963"
],
"metanetx.chemical":[
"MNXM58"
],
"reactome.compound":[
"174375",
"1606845",
"1609649",
"1614584",
"427648"
],
"sabiork":[
"1759"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29301",
"cpd00048"
]
}
},
{
"id":"leu__L_c",
"name":"L-Leucine",
"compartment":"c",
"charge":0,
"formula":"C6H13NO2",
"notes":{
"original_bigg_ids":[
"leu__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"leu__L"
],
"biocyc":[
"META:LEU"
],
"chebi":[
"CHEBI:32620",
"CHEBI:25017",
"CHEBI:43695",
"CHEBI:21348",
"CHEBI:13131",
"CHEBI:43733",
"CHEBI:43646",
"CHEBI:43814",
"CHEBI:6260",
"CHEBI:32628",
"CHEBI:32627",
"CHEBI:10866",
"CHEBI:57427",
"CHEBI:32619",
"CHEBI:15603"
],
"hmdb":[
"HMDB00687",
"HMDB62203"
],
"inchi_key":[
"ROHFNLRQFUQHCH-YFKPBYRVSA-N"
],
"kegg.compound":[
"C16439",
"C00123"
],
"kegg.drug":[
"D00030"
],
"lipidmaps":[
"LMFA01100048"
],
"metanetx.chemical":[
"MNXM140"
],
"reactome.compound":[
"29588",
"113580",
"351964"
],
"sabiork":[
"21059",
"69"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00107",
"cpd15143"
]
}
},
{
"id":"hco3_c",
"name":"Bicarbonate",
"compartment":"c",
"charge":-1,
"formula":"CHO3",
"notes":{
"original_bigg_ids":[
"hco3_c"
]
},
"annotation":{
"bigg.metabolite":[
"hco3"
],
"biocyc":[
"META:CO3",
"META:H2CO3",
"META:HCO3"
],
"chebi":[
"CHEBI:13363",
"CHEBI:41605",
"CHEBI:13351",
"CHEBI:29201",
"CHEBI:22863",
"CHEBI:3401",
"CHEBI:23017",
"CHEBI:23744",
"CHEBI:40961",
"CHEBI:41609",
"CHEBI:17544",
"CHEBI:28976",
"CHEBI:5589"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/c78c72b7-2f2b-4dde-9f3d-80bb61a1da3e",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/34be09c7-8615-4ee1-806a-6a93ae28d922"
],
"hmdb":[
"HMDB03538",
"HMDB00595",
"HMDB31453"
],
"inchi_key":[
"BVKZGUZCCUSVTD-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01353",
"C00288"
],
"metanetx.chemical":[
"MNXM60"
],
"reactome.compound":[
"29896",
"425425",
"111627"
],
"sabiork":[
"1916",
"2275"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00242"
]
}
},
{
"id":"ahcys_c",
"name":"S-Adenosyl-L-homocysteine",
"compartment":"c",
"charge":0,
"formula":"C14H20N6O5S",
"notes":{
"original_bigg_ids":[
"ahcys_c"
]
},
"annotation":{
"bigg.metabolite":[
"ahcys"
],
"biocyc":[
"META:ADENOSYL-HOMO-CYS"
],
"chebi":[
"CHEBI:12741",
"CHEBI:45495",
"CHEBI:8945",
"CHEBI:16680",
"CHEBI:67009",
"CHEBI:22034",
"CHEBI:57856",
"CHEBI:12761",
"CHEBI:12759"
],
"hmdb":[
"HMDB00939"
],
"inchi_key":[
"ZJUKTBDSGOFHSH-WFMPWKQPSA-N"
],
"kegg.compound":[
"C00021"
],
"metanetx.chemical":[
"MNXM19"
],
"reactome.compound":[
"2162252",
"77502",
"5278409",
"71285"
],
"sabiork":[
"1274"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00019"
]
}
},
{
"id":"5apru_c",
"name":"5-Amino-6-(5'-phosphoribosylamino)uracil",
"compartment":"c",
"charge":-2,
"formula":"C9H13N4O9P",
"notes":{
"original_bigg_ids":[
"5apru_c"
]
},
"annotation":{
"bigg.metabolite":[
"5apru"
],
"biocyc":[
"META:CPD-602"
],
"chebi":[
"CHEBI:12108",
"CHEBI:58453",
"CHEBI:18337",
"CHEBI:2032",
"CHEBI:20546",
"CHEBI:59550",
"CHEBI:59551"
],
"inchi_key":[
"LZEXYCAGPMYXLX-UMMCILCDSA-L"
],
"kegg.compound":[
"C01268"
],
"metanetx.chemical":[
"MNXM1532"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00931"
]
}
},
{
"id":"pan4p_c",
"name":"Pantetheine 4'-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C11H21N2O7PS",
"notes":{
"original_bigg_ids":[
"pan4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"pan4p"
],
"biocyc":[
"META:PHOSPHOPANTOTHEINE-GROUP",
"META:PANTETHEINE-P"
],
"chebi":[
"CHEBI:14738",
"CHEBI:11916",
"CHEBI:14736",
"CHEBI:7914",
"CHEBI:45012",
"CHEBI:14825",
"CHEBI:47942",
"CHEBI:14735",
"CHEBI:4222",
"CHEBI:29890",
"CHEBI:61723",
"CHEBI:16858",
"CHEBI:25844"
],
"hmdb":[
"HMDB01416"
],
"inchi_key":[
"JDMUPRLRUUMCTL-VIFPVBQESA-L"
],
"kegg.compound":[
"C01134"
],
"metanetx.chemical":[
"MNXM373"
],
"reactome.compound":[
"196767",
"8939005",
"6809358"
],
"sabiork":[
"3034"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27792",
"cpd00834"
]
}
},
{
"id":"succ_c",
"name":"Succinate",
"compartment":"c",
"charge":-2,
"formula":"C4H4O4",
"notes":{
"original_bigg_ids":[
"succ_c"
]
},
"annotation":{
"bigg.metabolite":[
"succ"
],
"biocyc":[
"META:SUC"
],
"chebi":[
"CHEBI:22941",
"CHEBI:26803",
"CHEBI:15741",
"CHEBI:132287",
"CHEBI:45639",
"CHEBI:30779",
"CHEBI:15125",
"CHEBI:22943",
"CHEBI:26807",
"CHEBI:9304",
"CHEBI:90372",
"CHEBI:30031"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/cc98aff0-7f64-4db4-9d59-de961c228496",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/6377658b-03f6-4fed-a5bf-ff0f2389b693",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/600b74d3-8fe5-426d-bedf-291175bd23e4",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/8fdfd425-4343-4bf2-8427-b2ffa57fdbd7"
],
"hmdb":[
"HMDB00254"
],
"inchi_key":[
"KDYFGRWQOYBRFD-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00042"
],
"lipidmaps":[
"LMFA01170043"
],
"metanetx.chemical":[
"MNXM25"
],
"reactome.compound":[
"389583",
"5278787",
"159939",
"433123",
"29434",
"113536"
],
"sabiork":[
"1924"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00036"
]
}
},
{
"id":"ru5p__D_c",
"name":"D-Ribulose 5-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H9O8P",
"notes":{
"original_bigg_ids":[
"ru5p__D_c"
]
},
"annotation":{
"bigg.metabolite":[
"ru5p__D"
],
"biocyc":[
"META:RIBULOSE-5P"
],
"chebi":[
"CHEBI:40192",
"CHEBI:21088",
"CHEBI:17363",
"CHEBI:26572",
"CHEBI:13040",
"CHEBI:37455",
"CHEBI:58121",
"CHEBI:13018",
"CHEBI:4243"
],
"hmdb":[
"HMDB02033",
"HMDB02694",
"HMDB00618"
],
"inchi_key":[
"FNZLKVNUWIIPSJ-UHNVWZDZSA-L"
],
"kegg.compound":[
"C00199"
],
"metanetx.chemical":[
"MNXM145"
],
"reactome.compound":[
"29732"
],
"sabiork":[
"22814",
"1313"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00171"
]
}
},
{
"id":"citac_c",
"name":"Citraconate",
"compartment":"c",
"charge":-2,
"formula":"C5H4O4",
"notes":{
"original_bigg_ids":[
"citac_c"
]
},
"annotation":{
"bigg.metabolite":[
"citac"
],
"biocyc":[
"META:2-METHYLMALEATE"
],
"chebi":[
"CHEBI:17626",
"CHEBI:19704",
"CHEBI:30719",
"CHEBI:19703",
"CHEBI:1207",
"CHEBI:11623"
],
"hmdb":[
"HMDB00634"
],
"inchi_key":[
"HNEGQIOMVPPMNR-IHWYPQMZSA-L"
],
"kegg.compound":[
"C02226"
],
"lipidmaps":[
"LMFA01170099"
],
"metanetx.chemical":[
"MNXM2356"
],
"sabiork":[
"2388"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01502"
]
}
},
{
"id":"14dhncoa_c",
"name":"1,4-dihydroxy-2-napthoyl-CoA",
"compartment":"c",
"charge":-4,
"formula":"C32H38N7O19P3S",
"notes":{
"original_bigg_ids":[
"14dhncoa_c"
]
},
"annotation":{
"bigg.metabolite":[
"14dhncoa"
],
"metanetx.chemical":[
"MNXM147663"
],
"sbo":"SBO:0000247"
}
},
{
"id":"hmppp9_c",
"name":" 13(1)-Hydroxy-magnesium-protoporphyrin IX 13-monomethyl ester",
"compartment":"c",
"charge":-1,
"formula":"C35H33MgN4O5",
"notes":{
"original_bigg_ids":[
"hmppp9_c"
]
},
"annotation":{
"bigg.metabolite":[
"hmppp9"
],
"biocyc":[
"META:13-HYDROXY-MAGNESIUM-PROTOPORP"
],
"chebi":[
"CHEBI:10835",
"CHEBI:60489",
"CHEBI:11322",
"CHEBI:77664",
"CHEBI:29463",
"CHEBI:15434"
],
"inchi_key":[
"MVCDIAGKFJFPBB-JXBSUKTBSA-L"
],
"kegg.compound":[
"C11829"
],
"metanetx.chemical":[
"MNXM60922"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pydx5p_c",
"name":"Pyridoxal 5'-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C8H8NO6P",
"notes":{
"original_bigg_ids":[
"pydx5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"pydx5p"
],
"biocyc":[
"META:PYRIDOXAL_PHOSPHATE"
],
"chebi":[
"CHEBI:8668",
"CHEBI:597326",
"CHEBI:45145",
"CHEBI:18405",
"CHEBI:14977",
"CHEBI:26424",
"CHEBI:234571",
"CHEBI:358848"
],
"hmdb":[
"HMDB01491"
],
"inchi_key":[
"NGVDGCNFYWLIFO-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00018"
],
"metanetx.chemical":[
"MNXM161"
],
"reactome.compound":[
"29390"
],
"sabiork":[
"1271"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00016"
]
}
},
{
"id":"2dhp_c",
"name":"2-Dehydropantoate",
"compartment":"c",
"charge":-1,
"formula":"C6H9O4",
"notes":{
"original_bigg_ids":[
"2dhp_c"
]
},
"annotation":{
"bigg.metabolite":[
"2dhp"
],
"biocyc":[
"META:2-DEHYDROPANTOATE"
],
"chebi":[
"CHEBI:1071",
"CHEBI:11561",
"CHEBI:19545",
"CHEBI:17094"
],
"inchi_key":[
"PKVVTUWHANFMQC-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00966"
],
"metanetx.chemical":[
"MNXM959"
],
"sabiork":[
"5342"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00712"
]
}
},
{
"id":"ade_c",
"name":"Adenine",
"compartment":"c",
"charge":0,
"formula":"C5H5N5",
"notes":{
"original_bigg_ids":[
"ade_c"
]
},
"annotation":{
"bigg.metabolite":[
"ade"
],
"biocyc":[
"META:ADENINE",
"META:ADENINE-RING"
],
"chebi":[
"CHEBI:16708",
"CHEBI:22236",
"CHEBI:40579",
"CHEBI:13733",
"CHEBI:2470"
],
"hmdb":[
"HMDB00034"
],
"inchi_key":[
"GFFGJBXGBJISGV-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00147"
],
"kegg.drug":[
"D00034"
],
"metanetx.chemical":[
"MNXM168"
],
"reactome.compound":[
"83951"
],
"sabiork":[
"57"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00128",
"cpd22238"
]
}
},
{
"id":"asp__L_c",
"name":"L-Aspartate",
"compartment":"c",
"charge":-1,
"formula":"C4H6NO4",
"notes":{
"original_bigg_ids":[
"asp__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"asp__L"
],
"biocyc":[
"META:L-ASPARTATE"
],
"chebi":[
"CHEBI:17053",
"CHEBI:22659",
"CHEBI:6193",
"CHEBI:21247",
"CHEBI:29993",
"CHEBI:40942",
"CHEBI:29995",
"CHEBI:22660",
"CHEBI:29991",
"CHEBI:132943",
"CHEBI:35391",
"CHEBI:13085",
"CHEBI:40913",
"CHEBI:21244",
"CHEBI:40853",
"CHEBI:29992",
"CHEBI:40900"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/4b0cdcb0-137a-4ddc-8e5c-2b55ea238c15"
],
"hmdb":[
"HMDB62186",
"HMDB62501",
"HMDB00191"
],
"inchi_key":[
"CKLJMWTZIZZHCS-REOHCLBHSA-M"
],
"kegg.compound":[
"C00049",
"C16433"
],
"kegg.drug":[
"D00013"
],
"metanetx.chemical":[
"MNXM42"
],
"reactome.compound":[
"113553",
"29448"
],
"sabiork":[
"71"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00041",
"cpd19181"
]
}
},
{
"id":"h2o_cx",
"name":"H2O H2O",
"compartment":"cx",
"charge":0,
"formula":"H2O",
"notes":{
"original_bigg_ids":[
"h2o_cx"
]
},
"annotation":{
"bigg.metabolite":[
"h2o"
],
"biocyc":[
"META:CPD-15815",
"META:OXONIUM",
"META:HYDROXYL-GROUP",
"META:WATER",
"META:OH"
],
"chebi":[
"CHEBI:13352",
"CHEBI:30490",
"CHEBI:43228",
"CHEBI:33813",
"CHEBI:44292",
"CHEBI:44641",
"CHEBI:27313",
"CHEBI:42043",
"CHEBI:44819",
"CHEBI:29356",
"CHEBI:5594",
"CHEBI:10743",
"CHEBI:15377",
"CHEBI:42857",
"CHEBI:13365",
"CHEBI:29412",
"CHEBI:16234",
"CHEBI:13419",
"CHEBI:5585",
"CHEBI:44701"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/799908db-b8c9-4982-86cb-1f225e2ad08c",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/e7f34a8e-cded-4793-b6d5-792335b38636",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/969d0227-3069-4e44-9525-7ae7bad84170"
],
"hmdb":[
"HMDB02111",
"HMDB01039"
],
"inchi_key":[
"XLYOFNOQVPJJNP-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00001",
"C01328"
],
"kegg.drug":[
"D00001",
"D06322"
],
"metanetx.chemical":[
"MNXM2"
],
"reactome.compound":[
"113521",
"141343",
"2022884",
"5278291",
"29356",
"189422",
"5668574",
"5693747",
"109276",
"113519",
"1605715",
"8851517",
"113518",
"351603"
],
"sabiork":[
"40"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27222",
"cpd00001",
"cpd15275"
]
}
},
{
"id":"h2s_c",
"name":"Hydrogen sulfide",
"compartment":"c",
"charge":-1,
"formula":"HS",
"notes":{
"original_bigg_ids":[
"h2s_c"
]
},
"annotation":{
"bigg.metabolite":[
"h2s"
],
"biocyc":[
"META:CPD-846",
"META:CPD-7046",
"META:HS"
],
"chebi":[
"CHEBI:14414",
"CHEBI:43058",
"CHEBI:5787",
"CHEBI:13356",
"CHEBI:30488",
"CHEBI:24639",
"CHEBI:29919",
"CHEBI:16136",
"CHEBI:15138",
"CHEBI:45489"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/6fca0a43-b0f0-41dd-a454-c7880342d6be",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/83aab241-d065-45ef-a799-98fdad5bcf04",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/0b237b94-a6df-4792-8866-246b2230eef0",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/6715c2d9-35cb-48df-aa0b-611368e2fb0a"
],
"hmdb":[
"HMDB00598",
"HMDB03276"
],
"inchi_key":[
"RWSOTUBLDIXVET-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00283"
],
"metanetx.chemical":[
"MNXM89582"
],
"reactome.compound":[
"1663154",
"1614532",
"1655881"
],
"sabiork":[
"2007"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd24697",
"cpd00239"
]
}
},
{
"id":"orot_c",
"name":"Orotate C5H3N2O4",
"compartment":"c",
"charge":-1,
"formula":"C5H3N2O4",
"notes":{
"original_bigg_ids":[
"orot_c"
]
},
"annotation":{
"bigg.metabolite":[
"orot"
],
"biocyc":[
"META:OROTATE"
],
"chebi":[
"CHEBI:14698",
"CHEBI:7787",
"CHEBI:16742",
"CHEBI:25720",
"CHEBI:44781",
"CHEBI:30839",
"CHEBI:25719"
],
"hmdb":[
"HMDB00226"
],
"inchi_key":[
"PXQPEWDEAKTCGB-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00295"
],
"kegg.drug":[
"D00055"
],
"metanetx.chemical":[
"MNXM235"
],
"reactome.compound":[
"76632"
],
"sabiork":[
"2009"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00247"
]
}
},
{
"id":"g1p_c",
"name":"D-Glucose 1-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O9P",
"notes":{
"original_bigg_ids":[
"g1p_c"
]
},
"annotation":{
"bigg.metabolite":[
"g1p"
],
"biocyc":[
"META:D-glucose-1-phosphates",
"META:GLC-1-P"
],
"chebi":[
"CHEBI:10246",
"CHEBI:42623",
"CHEBI:12967",
"CHEBI:12320",
"CHEBI:29042",
"CHEBI:4169",
"CHEBI:58601",
"CHEBI:57629",
"CHEBI:16077",
"CHEBI:21001",
"CHEBI:12970",
"CHEBI:21004"
],
"hmdb":[
"HMDB01586",
"HMDB01306"
],
"inchi_key":[
"HXXFSFRBOHSIMQ-GASJEMHNSA-L"
],
"kegg.compound":[
"C00103"
],
"metanetx.chemical":[
"MNXM89588"
],
"reactome.compound":[
"29548"
],
"sabiork":[
"1450",
"23742",
"1298"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00089",
"cpd28817"
]
}
},
{
"id":"h2o_c",
"name":"H2O H2O",
"compartment":"c",
"charge":0,
"formula":"H2O",
"notes":{
"original_bigg_ids":[
"h2o_c"
]
},
"annotation":{
"bigg.metabolite":[
"h2o"
],
"biocyc":[
"META:CPD-15815",
"META:OXONIUM",
"META:HYDROXYL-GROUP",
"META:WATER",
"META:OH"
],
"chebi":[
"CHEBI:13352",
"CHEBI:30490",
"CHEBI:43228",
"CHEBI:33813",
"CHEBI:44292",
"CHEBI:44641",
"CHEBI:27313",
"CHEBI:42043",
"CHEBI:44819",
"CHEBI:29356",
"CHEBI:5594",
"CHEBI:10743",
"CHEBI:15377",
"CHEBI:42857",
"CHEBI:13365",
"CHEBI:29412",
"CHEBI:16234",
"CHEBI:13419",
"CHEBI:5585",
"CHEBI:44701"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/799908db-b8c9-4982-86cb-1f225e2ad08c",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/e7f34a8e-cded-4793-b6d5-792335b38636",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/969d0227-3069-4e44-9525-7ae7bad84170"
],
"hmdb":[
"HMDB02111",
"HMDB01039"
],
"inchi_key":[
"XLYOFNOQVPJJNP-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00001",
"C01328"
],
"kegg.drug":[
"D00001",
"D06322"
],
"metanetx.chemical":[
"MNXM2"
],
"reactome.compound":[
"113521",
"141343",
"2022884",
"5278291",
"29356",
"189422",
"5668574",
"5693747",
"109276",
"113519",
"1605715",
"8851517",
"113518",
"351603"
],
"sabiork":[
"40"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27222",
"cpd00001",
"cpd15275"
]
}
},
{
"id":"3hdecACP_c",
"name":"(R)-3-Hydroxydecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C10H19O2SR",
"notes":{
"original_bigg_ids":[
"3hdecACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hdecACP"
],
"biocyc":[
"META:Beta-hydroxydecanoyl-ACPs"
],
"kegg.compound":[
"C04619"
],
"metanetx.chemical":[
"MNXM7127"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11482"
]
}
},
{
"id":"2sephchc_c",
"name":"2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate",
"compartment":"c",
"charge":-3,
"formula":"C14H13O9",
"notes":{
"original_bigg_ids":[
"2sephchc_c"
]
},
"annotation":{
"bigg.metabolite":[
"2sephchc"
],
"chebi":[
"CHEBI:50271",
"CHEBI:58818"
],
"inchi_key":[
"XYCATPIYKOARSZ-OAIFWDMCSA-K"
],
"kegg.compound":[
"C16519"
],
"metanetx.chemical":[
"MNXM1861"
],
"sabiork":[
"27666"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd16335"
]
}
},
{
"id":"acg5p_c",
"name":"N-Acetyl-L-glutamyl 5-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C7H9NO8P",
"notes":{
"original_bigg_ids":[
"acg5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"acg5p"
],
"biocyc":[
"META:N-ACETYL-GLUTAMYL-P"
],
"chebi":[
"CHEBI:21550",
"CHEBI:12576",
"CHEBI:16878",
"CHEBI:12441",
"CHEBI:7151",
"CHEBI:57936"
],
"hmdb":[
"HMDB06456"
],
"inchi_key":[
"FCVIHFVSXHOPSW-YFKPBYRVSA-K"
],
"kegg.compound":[
"C04133"
],
"metanetx.chemical":[
"MNXM1384"
],
"sabiork":[
"1790"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02552"
]
}
},
{
"id":"h_c",
"name":"H+",
"compartment":"c",
"charge":1,
"formula":"H",
"notes":{
"original_bigg_ids":[
"h_c"
]
},
"annotation":{
"bigg.metabolite":[
"h"
],
"biocyc":[
"META:PROTON"
],
"chebi":[
"CHEBI:5584",
"CHEBI:13357",
"CHEBI:15378",
"CHEBI:10744"
],
"hmdb":[
"HMDB59597"
],
"inchi_key":[
"GPRLSGONYQIRFK-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00080"
],
"metanetx.chemical":[
"MNXM1"
],
"reactome.compound":[
"2000349",
"425978",
"74722",
"428040",
"427899",
"428548",
"156540",
"70106",
"425969",
"1132304",
"5668577",
"1470067",
"163953",
"193465",
"113529",
"351626",
"425999",
"194688",
"374900",
"2872447",
"372511"
],
"sabiork":[
"39"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00067"
]
}
},
{
"id":"na1_c",
"name":"Sodium",
"compartment":"c",
"charge":1,
"formula":"Na",
"notes":{
"original_bigg_ids":[
"na1_c"
]
},
"annotation":{
"bigg.metabolite":[
"na1"
],
"biocyc":[
"META:NA+"
],
"chebi":[
"CHEBI:9175",
"CHEBI:49766",
"CHEBI:26717",
"CHEBI:29101"
],
"hmdb":[
"HMDB00588"
],
"inchi_key":[
"FKNQFGJONOIPTF-UHFFFAOYSA-N"
],
"kegg.compound":[
"C01330"
],
"metanetx.chemical":[
"MNXM27"
],
"reactome.compound":[
"2892454",
"83910",
"74113",
"425977",
"425971",
"2872443",
"425958"
],
"sabiork":[
"22"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00971"
]
}
},
{
"id":"ugmda_c",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine",
"compartment":"c",
"charge":-4,
"formula":"C41H61N9O28P2",
"notes":{
"original_bigg_ids":[
"ugmda_c"
]
},
"annotation":{
"bigg.metabolite":[
"ugmda"
],
"biocyc":[
"META:C1"
],
"chebi":[
"CHEBI:61386",
"CHEBI:13462",
"CHEBI:9833",
"CHEBI:18199",
"CHEBI:22126"
],
"inchi_key":[
"IMWOXEZVYQDRDF-MCZXNMLPSA-J"
],
"kegg.compound":[
"C04882"
],
"metanetx.chemical":[
"MNXM1954"
],
"sabiork":[
"7645"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02932",
"cpd02968"
]
}
},
{
"id":"2pglyc_c",
"name":"2-Phosphoglycolate",
"compartment":"c",
"charge":-3,
"formula":"C2H2O6P",
"notes":{
"original_bigg_ids":[
"2pglyc_c"
]
},
"annotation":{
"bigg.metabolite":[
"2pglyc"
],
"biocyc":[
"META:CPD-67"
],
"chebi":[
"CHEBI:1268",
"CHEBI:19764",
"CHEBI:19763",
"CHEBI:11652",
"CHEBI:44849",
"CHEBI:17150",
"CHEBI:58033"
],
"hmdb":[
"HMDB60148",
"HMDB00816"
],
"inchi_key":[
"ASCFNMCAHFUBCO-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00988"
],
"metanetx.chemical":[
"MNXM2074"
],
"sabiork":[
"1350"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00727"
]
}
},
{
"id":"gdp_c",
"name":"GDP C10H12N5O11P2",
"compartment":"c",
"charge":-3,
"formula":"C10H12N5O11P2",
"notes":{
"original_bigg_ids":[
"gdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"gdp"
],
"biocyc":[
"META:GDP"
],
"chebi":[
"CHEBI:5212",
"CHEBI:17552",
"CHEBI:58189",
"CHEBI:13327",
"CHEBI:42738",
"CHEBI:14379",
"CHEBI:24448",
"CHEBI:65180"
],
"hmdb":[
"HMDB01201"
],
"inchi_key":[
"QGWNDRXFNXRZMB-UUOKFMHZSA-K"
],
"kegg.compound":[
"C00035"
],
"kegg.glycan":[
"G10620"
],
"metanetx.chemical":[
"MNXM30"
],
"reactome.compound":[
"113525",
"29420",
"205689",
"111349"
],
"sabiork":[
"1280"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00031"
]
}
},
{
"id":"pq_um",
"name":"Plastoquinone",
"compartment":"um",
"charge":0,
"formula":"C53H80O2",
"notes":{
"original_bigg_ids":[
"pq_um"
]
},
"annotation":{
"bigg.metabolite":[
"pq"
],
"metanetx.chemical":[
"MNXM145596"
],
"sbo":"SBO:0000247"
}
},
{
"id":"ala_B_c",
"name":"Beta-Alanine",
"compartment":"c",
"charge":0,
"formula":"C3H7NO2",
"notes":{
"original_bigg_ids":[
"ala_B_c"
]
},
"annotation":{
"bigg.metabolite":[
"ala_B"
],
"biocyc":[
"META:B-ALANINE"
],
"chebi":[
"CHEBI:12389",
"CHEBI:63070",
"CHEBI:16958",
"CHEBI:22821",
"CHEBI:10343",
"CHEBI:57966",
"CHEBI:41050"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/0352ab69-1208-420e-b7c9-87b5b436f4df"
],
"hmdb":[
"HMDB00056"
],
"inchi_key":[
"UCMIRNVEIXFBKS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00099"
],
"kegg.drug":[
"D07561"
],
"metanetx.chemical":[
"MNXM144"
],
"reactome.compound":[
"73590",
"909777"
],
"sabiork":[
"1932"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00085"
]
}
},
{
"id":"man6p_c",
"name":"D-Mannose 6-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O9P",
"notes":{
"original_bigg_ids":[
"man6p_c"
]
},
"annotation":{
"bigg.metabolite":[
"man6p"
],
"biocyc":[
"META:Mannose-6-phosphate",
"META:CPD-15980",
"META:CPD-15979"
],
"chebi":[
"CHEBI:58735",
"CHEBI:48042",
"CHEBI:48066",
"CHEBI:4211",
"CHEBI:13000",
"CHEBI:17369"
],
"inchi_key":[
"NBSCHQHZLSJFNQ-QTVWNMPRSA-L"
],
"kegg.compound":[
"C00275"
],
"metanetx.chemical":[
"MNXM427"
],
"reactome.compound":[
"532562"
],
"sabiork":[
"1323",
"24709"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00235"
]
}
},
{
"id":"glyc3p_c",
"name":"Glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C3H7O6P",
"notes":{
"original_bigg_ids":[
"glyc3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"glyc3p"
],
"biocyc":[
"META:GLYCEROL-3P"
],
"chebi":[
"CHEBI:12843",
"CHEBI:26705",
"CHEBI:57597",
"CHEBI:12848",
"CHEBI:42793",
"CHEBI:10648",
"CHEBI:15978"
],
"hmdb":[
"HMDB02722",
"HMDB00126"
],
"inchi_key":[
"AWUCVROLDVIAJX-GSVOUGTGSA-L"
],
"kegg.compound":[
"C00093"
],
"metanetx.chemical":[
"MNXM66"
],
"reactome.compound":[
"188458",
"76114"
],
"sabiork":[
"1296"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00080"
]
}
},
{
"id":"hgbyr_c",
"name":"Hydrogenobyrinate",
"compartment":"c",
"charge":-6,
"formula":"C45H54N4O14",
"notes":{
"original_bigg_ids":[
"hgbyr_c"
]
},
"annotation":{
"bigg.metabolite":[
"hgbyr"
],
"biocyc":[
"META:CPD-687"
],
"chebi":[
"CHEBI:14415",
"CHEBI:24643",
"CHEBI:17926",
"CHEBI:41604",
"CHEBI:5788",
"CHEBI:77873",
"CHEBI:58323",
"CHEBI:24641"
],
"inchi_key":[
"MYMATQFDUQLSCD-IPUCCYEASA-J"
],
"kegg.compound":[
"C06399"
],
"metanetx.chemical":[
"MNXM1279"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03832"
]
}
},
{
"id":"cobalt2_c",
"name":"Co2+",
"compartment":"c",
"charge":2,
"formula":"Co",
"notes":{
"original_bigg_ids":[
"cobalt2_c"
]
},
"annotation":{
"bigg.metabolite":[
"cobalt2"
],
"biocyc":[
"META:CO+2"
],
"chebi":[
"CHEBI:48828",
"CHEBI:48827",
"CHEBI:23337"
],
"hmdb":[
"HMDB00608"
],
"inchi_key":[
"XLJKHNWPARRRJB-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00175"
],
"metanetx.chemical":[
"MNXM90960"
],
"sabiork":[
"23"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00149"
]
}
},
{
"id":"palmACP_c",
"name":"Palmitoyl-ACP (n-C16:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C16H31ORS",
"notes":{
"original_bigg_ids":[
"palmACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"palmACP"
],
"metanetx.chemical":[
"MNXM2026"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pqh2_um",
"name":"Plastoquinol",
"compartment":"um",
"charge":0,
"formula":"C53H82O2",
"notes":{
"original_bigg_ids":[
"pqh2_um"
]
},
"annotation":{
"bigg.metabolite":[
"pqh2"
],
"metanetx.chemical":[
"MNXM145595"
],
"sbo":"SBO:0000247"
}
},
{
"id":"gam1p_c",
"name":"D-Glucosamine 1-phosphate",
"compartment":"c",
"charge":-1,
"formula":"C6H13NO8P",
"notes":{
"original_bigg_ids":[
"gam1p_c"
]
},
"annotation":{
"bigg.metabolite":[
"gam1p"
],
"biocyc":[
"META:GLUCOSAMINE-1P"
],
"chebi":[
"CHEBI:12316",
"CHEBI:4163",
"CHEBI:42868",
"CHEBI:20994",
"CHEBI:27625",
"CHEBI:58516"
],
"inchi_key":[
"YMJBYRVFGYXULK-QZABAPFNSA-M"
],
"kegg.compound":[
"C06156"
],
"metanetx.chemical":[
"MNXM969"
],
"sabiork":[
"1854"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03671"
]
}
},
{
"id":"pser__L_c",
"name":"O-Phospho-L-serine",
"compartment":"c",
"charge":-2,
"formula":"C3H6NO6P",
"notes":{
"original_bigg_ids":[
"pser__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"pser__L"
],
"biocyc":[
"META:3-P-SERINE"
],
"chebi":[
"CHEBI:57524",
"CHEBI:12718",
"CHEBI:15811",
"CHEBI:21966",
"CHEBI:7692"
],
"hmdb":[
"HMDB00272"
],
"inchi_key":[
"BZQFBWGGLXLEPQ-REOHCLBHSA-L"
],
"kegg.compound":[
"C01005"
],
"metanetx.chemical":[
"MNXM379"
],
"reactome.compound":[
"936706"
],
"sabiork":[
"2212"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00738"
]
}
},
{
"id":"argsuc_c",
"name":"N(omega)-(L-Arginino)succinate",
"compartment":"c",
"charge":-1,
"formula":"C10H17N4O6",
"notes":{
"original_bigg_ids":[
"argsuc_c"
]
},
"annotation":{
"bigg.metabolite":[
"argsuc"
],
"biocyc":[
"META:L-ARGININO-SUCCINATE"
],
"chebi":[
"CHEBI:7098",
"CHEBI:57472",
"CHEBI:15682",
"CHEBI:10960",
"CHEBI:21475"
],
"hmdb":[
"HMDB00052",
"HMDB01006"
],
"inchi_key":[
"KDZOASGQNOPSCU-ZBHICJROSA-M"
],
"kegg.compound":[
"C03406"
],
"metanetx.chemical":[
"MNXM722743"
],
"reactome.compound":[
"34575"
],
"sabiork":[
"4057"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02152",
"cpd29673"
]
}
},
{
"id":"ocACP_c",
"name":"Octanoyl-ACP (n-C8:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C8H15ORS",
"notes":{
"original_bigg_ids":[
"ocACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"ocACP"
],
"metanetx.chemical":[
"MNXM90185"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dhap_c",
"name":"Dihydroxyacetone phosphate",
"compartment":"c",
"charge":-2,
"formula":"C3H5O6P",
"notes":{
"original_bigg_ids":[
"dhap_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhap"
],
"biocyc":[
"META:DIHYDROXY-ACETONE-PHOSPHATE"
],
"chebi":[
"CHEBI:14341",
"CHEBI:5454",
"CHEBI:16108",
"CHEBI:14342",
"CHEBI:24355",
"CHEBI:39571",
"CHEBI:57642"
],
"hmdb":[
"HMDB11735",
"HMDB01473"
],
"inchi_key":[
"GNGACRATGGDKBX-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00111"
],
"metanetx.chemical":[
"MNXM77"
],
"reactome.compound":[
"390404",
"75970",
"188451"
],
"sabiork":[
"28"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00095"
]
}
},
{
"id":"dttp_c",
"name":"DTTP C10H13N2O14P3",
"compartment":"c",
"charge":-4,
"formula":"C10H13N2O14P3",
"notes":{
"original_bigg_ids":[
"dttp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dttp"
],
"biocyc":[
"META:TTP"
],
"chebi":[
"CHEBI:27000",
"CHEBI:37568",
"CHEBI:10530",
"CHEBI:58370",
"CHEBI:14093",
"CHEBI:46175",
"CHEBI:18077"
],
"hmdb":[
"HMDB01342"
],
"inchi_key":[
"NHVNXKFIZYSCEB-XLPZGREQSA-J"
],
"kegg.compound":[
"C00459"
],
"metanetx.chemical":[
"MNXM394"
],
"sabiork":[
"1679"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00357"
]
}
},
{
"id":"26dap_LL_c",
"name":"LL-2,6-Diaminoheptanedioate",
"compartment":"c",
"charge":0,
"formula":"C7H14N2O4",
"notes":{
"original_bigg_ids":[
"26dap_LL_c"
]
},
"annotation":{
"bigg.metabolite":[
"26dap_LL"
],
"biocyc":[
"META:LL-DIAMINOPIMELATE"
],
"chebi":[
"CHEBI:21428",
"CHEBI:6341",
"CHEBI:21429",
"CHEBI:16026",
"CHEBI:57609",
"CHEBI:13192",
"CHEBI:47031"
],
"hmdb":[
"HMDB01370"
],
"inchi_key":[
"GMKMEZVLHJARHF-WHFBIAKZSA-N"
],
"kegg.compound":[
"C00666"
],
"lipidmaps":[
"LMFA01170102"
],
"metanetx.chemical":[
"MNXM644"
],
"sabiork":[
"5171"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00504"
]
}
},
{
"id":"mn2_c",
"name":"Manganese",
"compartment":"c",
"charge":2,
"formula":"Mn",
"notes":{
"original_bigg_ids":[
"mn2_c"
]
},
"annotation":{
"bigg.metabolite":[
"mn2"
],
"biocyc":[
"META:MN+2"
],
"chebi":[
"CHEBI:21435",
"CHEBI:25156",
"CHEBI:29035",
"CHEBI:49749"
],
"hmdb":[
"HMDB01333"
],
"inchi_key":[
"WAEMQWOKJMHJLA-UHFFFAOYSA-N"
],
"kegg.compound":[
"C19610"
],
"metanetx.chemical":[
"MNXM2255"
],
"reactome.compound":[
"29418",
"1981162"
],
"sabiork":[
"1279"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd20863",
"cpd00030"
]
}
},
{
"id":"ddcaACP_c",
"name":"Dodecanoyl-ACP (n-C12:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C12H23ORS",
"notes":{
"original_bigg_ids":[
"ddcaACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"ddcaACP"
],
"metanetx.chemical":[
"MNXM89851"
],
"sbo":"SBO:0000247"
}
},
{
"id":"suc6p_c",
"name":"Sucrose 6-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C12H21O14P",
"notes":{
"original_bigg_ids":[
"suc6p_c"
]
},
"annotation":{
"bigg.metabolite":[
"suc6p"
],
"biocyc":[
"META:CPD-15716",
"META:SUCROSE-6P"
],
"chebi":[
"CHEBI:9315",
"CHEBI:131603",
"CHEBI:57723",
"CHEBI:91002",
"CHEBI:15129",
"CHEBI:15130",
"CHEBI:26813",
"CHEBI:16308"
],
"inchi_key":[
"PJTTXANTBQDXME-UGDNZRGBSA-L"
],
"kegg.compound":[
"C16688",
"C02591"
],
"kegg.glycan":[
"G10508"
],
"metanetx.chemical":[
"MNXM1004"
],
"sabiork":[
"1373"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01693",
"cpd19187"
]
}
},
{
"id":"u3hga2_c",
"name":"UDP-3-O-(3-hydroxyhexadecanoyl)-D-glucosamine",
"compartment":"c",
"charge":-1,
"formula":"C31H54N3O18P2",
"notes":{
"original_bigg_ids":[
"u3hga2_c"
]
},
"annotation":{
"bigg.metabolite":[
"u3hga2"
],
"sbo":"SBO:0000247"
}
},
{
"id":"6pgc_c",
"name":"6-Phospho-D-gluconate",
"compartment":"c",
"charge":-3,
"formula":"C6H10O10P",
"notes":{
"original_bigg_ids":[
"6pgc_c"
]
},
"annotation":{
"bigg.metabolite":[
"6pgc"
],
"biocyc":[
"META:CPD-2961"
],
"chebi":[
"CHEBI:33851",
"CHEBI:2231",
"CHEBI:16863",
"CHEBI:40282",
"CHEBI:12232",
"CHEBI:48928",
"CHEBI:58759"
],
"hmdb":[
"HMDB01316",
"HMDB62800"
],
"inchi_key":[
"BIRSGZKFKXLSJQ-SQOUGZDYSA-K"
],
"kegg.compound":[
"C00345"
],
"metanetx.chemical":[
"MNXM325"
],
"reactome.compound":[
"29996"
],
"sabiork":[
"22801",
"2024"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00284"
]
}
},
{
"id":"2pglyc_cx",
"name":"2-Phosphoglycolate",
"compartment":"cx",
"charge":-3,
"formula":"C2H2O6P",
"notes":{
"original_bigg_ids":[
"2pglyc_cx"
]
},
"annotation":{
"bigg.metabolite":[
"2pglyc"
],
"biocyc":[
"META:CPD-67"
],
"chebi":[
"CHEBI:1268",
"CHEBI:19764",
"CHEBI:19763",
"CHEBI:11652",
"CHEBI:44849",
"CHEBI:17150",
"CHEBI:58033"
],
"hmdb":[
"HMDB60148",
"HMDB00816"
],
"inchi_key":[
"ASCFNMCAHFUBCO-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00988"
],
"metanetx.chemical":[
"MNXM2074"
],
"sabiork":[
"1350"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00727"
]
}
},
{
"id":"sprm_c",
"name":"Spermine C10H30N4",
"compartment":"c",
"charge":4,
"formula":"C10H30N4",
"notes":{
"original_bigg_ids":[
"sprm_c"
]
},
"annotation":{
"bigg.metabolite":[
"sprm"
],
"biocyc":[
"META:SPERMINE"
],
"chebi":[
"CHEBI:15746",
"CHEBI:9219",
"CHEBI:15098",
"CHEBI:45725",
"CHEBI:26734",
"CHEBI:45583"
],
"hmdb":[
"HMDB01256"
],
"inchi_key":[
"PFNFFQXMRSDOHW-UHFFFAOYSA-R"
],
"kegg.compound":[
"C00750"
],
"metanetx.chemical":[
"MNXM408"
],
"reactome.compound":[
"141342",
"353560"
],
"sabiork":[
"3089"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00558"
]
}
},
{
"id":"trdox_c",
"name":"Oxidized thioredoxin",
"compartment":"c",
"charge":0,
"formula":"X",
"notes":{
"original_bigg_ids":[
"trdox_c"
]
},
"annotation":{
"bigg.metabolite":[
"trdox"
],
"biocyc":[
"META:Ox-Thioredoxin"
],
"chebi":[
"CHEBI:14726",
"CHEBI:15240",
"CHEBI:7845",
"CHEBI:18191"
],
"kegg.compound":[
"C00343"
],
"metanetx.chemical":[
"MNXM148"
],
"reactome.compound":[
"2142833"
],
"sabiork":[
"1331"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27735",
"cpd29682",
"cpd11420"
]
}
},
{
"id":"3oddecACP_c",
"name":"3-Oxododecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C12H21O2SR",
"notes":{
"original_bigg_ids":[
"3oddecACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3oddecACP"
],
"biocyc":[
"META:3-oxo-dodecanoyl-ACPs"
],
"chebi":[
"CHEBI:1637"
],
"kegg.compound":[
"C05756"
],
"lipidmaps":[
"LMFA07060014"
],
"metanetx.chemical":[
"MNXM28933"
],
"sabiork":[
"8116"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11489"
]
}
},
{
"id":"gcald_c",
"name":"Glycolaldehyde",
"compartment":"c",
"charge":0,
"formula":"C2H4O2",
"notes":{
"original_bigg_ids":[
"gcald_c"
]
},
"annotation":{
"bigg.metabolite":[
"gcald"
],
"biocyc":[
"META:GLYCOLALDEHYDE"
],
"chebi":[
"CHEBI:17071",
"CHEBI:14347",
"CHEBI:5474",
"CHEBI:24386",
"CHEBI:131198"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/e2dfc2d7-7e7a-4d56-be42-e908339482d8",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/63cc62ab-fc6a-445b-95c3-063343133b84",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/ce61ea61-b391-41cd-91ac-507b44085575"
],
"hmdb":[
"HMDB02165",
"HMDB03344"
],
"inchi_key":[
"WGCNASOHLSPBMP-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00266"
],
"metanetx.chemical":[
"MNXM349"
],
"sabiork":[
"2004"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00229"
]
}
},
{
"id":"2p4c2me_c",
"name":"2-phospho-4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol",
"compartment":"c",
"charge":-4,
"formula":"C14H22N3O17P3",
"notes":{
"original_bigg_ids":[
"2p4c2me_c"
]
},
"annotation":{
"bigg.metabolite":[
"2p4c2me"
],
"biocyc":[
"META:2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET"
],
"chebi":[
"CHEBI:57919",
"CHEBI:11650",
"CHEBI:11649",
"CHEBI:1266",
"CHEBI:16840"
],
"inchi_key":[
"HTJXTKBIUVFUAR-XHIBXCGHSA-J"
],
"kegg.compound":[
"C11436"
],
"metanetx.chemical":[
"MNXM1641"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08288"
]
}
},
{
"id":"cmp_c",
"name":"CMP C9H12N3O8P",
"compartment":"c",
"charge":-2,
"formula":"C9H12N3O8P",
"notes":{
"original_bigg_ids":[
"cmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"cmp"
],
"biocyc":[
"META:CMP"
],
"chebi":[
"CHEBI:60377",
"CHEBI:41312",
"CHEBI:58120",
"CHEBI:3275",
"CHEBI:41691",
"CHEBI:41319",
"CHEBI:23520",
"CHEBI:17361",
"CHEBI:13274",
"CHEBI:47362",
"CHEBI:48799",
"CHEBI:41666"
],
"hmdb":[
"HMDB00095"
],
"inchi_key":[
"IERHLVCPSMICTF-XVFCMESISA-L"
],
"kegg.compound":[
"C00055"
],
"kegg.glycan":[
"G10621"
],
"metanetx.chemical":[
"MNXM31"
],
"reactome.compound":[
"1524067",
"727810",
"109395"
],
"sabiork":[
"1284"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00046"
]
}
},
{
"id":"2h3oppan_c",
"name":"2-Hydroxy-3-oxopropanoate",
"compartment":"c",
"charge":-1,
"formula":"C3H3O4",
"notes":{
"original_bigg_ids":[
"2h3oppan_c"
]
},
"annotation":{
"bigg.metabolite":[
"2h3oppan"
],
"biocyc":[
"META:TARTRONATE-S-ALD"
],
"chebi":[
"CHEBI:57978",
"CHEBI:11583",
"CHEBI:16992",
"CHEBI:19605",
"CHEBI:1123",
"CHEBI:15194"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/8d90d1ea-105d-4bc4-aa70-509cf924dde0",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/41dfb598-597f-4cf0-9667-c2b6573aef5c"
],
"hmdb":[
"HMDB06781",
"HMDB06938"
],
"inchi_key":[
"QWBAFPFNGRFSFB-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01146"
],
"metanetx.chemical":[
"MNXM475"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00843"
]
}
},
{
"id":"bm_pro_c",
"name":"Protein component of biomass",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_pro_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_pro"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pi_c",
"name":"Phosphate",
"compartment":"c",
"charge":-2,
"formula":"HO4P",
"notes":{
"original_bigg_ids":[
"pi_c"
]
},
"annotation":{
"bigg.metabolite":[
"pi"
],
"biocyc":[
"META:Pi",
"META:CPD-16459",
"META:PHOSPHATE-GROUP"
],
"chebi":[
"CHEBI:26078",
"CHEBI:18367",
"CHEBI:29139",
"CHEBI:39739",
"CHEBI:43470",
"CHEBI:35780",
"CHEBI:43474",
"CHEBI:26020",
"CHEBI:45024",
"CHEBI:39745",
"CHEBI:29137",
"CHEBI:14791",
"CHEBI:7793"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/db5219ee-60cb-4370-b066-340c9faf069c",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/84684967-eade-48d4-b25d-c4aede0a0836",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/ad82c39b-2edb-4953-b971-79a2d2ea6e26",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/aac01fea-4223-49c1-8b12-cd50f11ebfc8",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/c581b2ce-6238-45de-abc0-60ca8d47ed04"
],
"hmdb":[
"HMDB02105",
"HMDB00973",
"HMDB01429",
"HMDB02142",
"HMDB05947"
],
"inchi_key":[
"NBIIXXVUZAFLBC-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00009"
],
"kegg.drug":[
"D05467"
],
"metanetx.chemical":[
"MNXM9"
],
"reactome.compound":[
"5228339",
"113550",
"8851513",
"113551",
"109277",
"29372",
"8851226",
"113548"
],
"sabiork":[
"36"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27787",
"cpd00009"
]
}
},
{
"id":"glu__D_c",
"name":"D-Glutamate",
"compartment":"c",
"charge":-1,
"formula":"C5H8NO4",
"notes":{
"original_bigg_ids":[
"glu__D_c"
]
},
"annotation":{
"bigg.metabolite":[
"glu__D"
],
"biocyc":[
"META:D-GLT"
],
"chebi":[
"CHEBI:29986",
"CHEBI:12979",
"CHEBI:21023",
"CHEBI:4183",
"CHEBI:29989",
"CHEBI:21022",
"CHEBI:15966"
],
"hmdb":[
"HMDB03339"
],
"inchi_key":[
"WHUUTDBJXJRKMK-GSVOUGTGSA-M"
],
"kegg.compound":[
"C00217"
],
"metanetx.chemical":[
"MNXM331"
],
"sabiork":[
"1978"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00186"
]
}
},
{
"id":"2obut_c",
"name":"2-Oxobutanoate",
"compartment":"c",
"charge":-1,
"formula":"C4H5O3",
"notes":{
"original_bigg_ids":[
"2obut_c"
]
},
"annotation":{
"bigg.metabolite":[
"2obut"
],
"biocyc":[
"META:2-OXOBUTANOATE"
],
"chebi":[
"CHEBI:1250",
"CHEBI:16763",
"CHEBI:19741",
"CHEBI:30831",
"CHEBI:11636",
"CHEBI:39748",
"CHEBI:19743"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/1d8dba15-23b7-4916-91ba-3b00be5e4e8b",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/86a149cf-c031-463b-aa33-253fcbde268f"
],
"hmdb":[
"HMDB00005",
"HMDB06544"
],
"inchi_key":[
"TYEYBOSBBBHJIV-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00109"
],
"lipidmaps":[
"LMFA01060002"
],
"metanetx.chemical":[
"MNXM159"
],
"reactome.compound":[
"936714"
],
"sabiork":[
"1934"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00094"
]
}
},
{
"id":"pnto__R_c",
"name":"(R)-Pantothenate",
"compartment":"c",
"charge":-1,
"formula":"C9H16NO5",
"notes":{
"original_bigg_ids":[
"pnto__R_c"
]
},
"annotation":{
"bigg.metabolite":[
"pnto__R"
],
"biocyc":[
"META:PANTOTHENATE"
],
"chebi":[
"CHEBI:29032",
"CHEBI:44679",
"CHEBI:25846",
"CHEBI:16454",
"CHEBI:18700",
"CHEBI:11008",
"CHEBI:18701",
"CHEBI:46905",
"CHEBI:14739",
"CHEBI:7916"
],
"hmdb":[
"HMDB00210",
"HMDB62717"
],
"inchi_key":[
"GHOKWGTUZJEAQD-ZETCQYMHSA-M"
],
"kegg.compound":[
"C00864"
],
"kegg.drug":[
"D07413"
],
"metanetx.chemical":[
"MNXM364"
],
"reactome.compound":[
"199192",
"196820"
],
"sabiork":[
"5286"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00644"
]
}
},
{
"id":"dtmp_c",
"name":"DTMP C10H13N2O8P",
"compartment":"c",
"charge":-2,
"formula":"C10H13N2O8P",
"notes":{
"original_bigg_ids":[
"dtmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dtmp"
],
"biocyc":[
"META:TMP"
],
"chebi":[
"CHEBI:47711",
"CHEBI:26999",
"CHEBI:63549",
"CHEBI:17013",
"CHEBI:63528",
"CHEBI:45772",
"CHEBI:45762",
"CHEBI:46960",
"CHEBI:45759",
"CHEBI:10529",
"CHEBI:45926",
"CHEBI:14092",
"CHEBI:46013",
"CHEBI:15246",
"CHEBI:46036"
],
"hmdb":[
"HMDB01227"
],
"inchi_key":[
"GYOZYWVXFNDGLU-XLPZGREQSA-L"
],
"kegg.compound":[
"C00364"
],
"metanetx.chemical":[
"MNXM257"
],
"reactome.compound":[
"109366"
],
"sabiork":[
"65"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00298"
]
}
},
{
"id":"dump_c",
"name":"DUMP C9H11N2O8P",
"compartment":"c",
"charge":-2,
"formula":"C9H11N2O8P",
"notes":{
"original_bigg_ids":[
"dump_c"
]
},
"annotation":{
"bigg.metabolite":[
"dump"
],
"biocyc":[
"META:DUMP"
],
"chebi":[
"CHEBI:19263",
"CHEBI:14094",
"CHEBI:46288",
"CHEBI:246422",
"CHEBI:47722",
"CHEBI:17622",
"CHEBI:42245",
"CHEBI:46286",
"CHEBI:10532"
],
"hmdb":[
"HMDB01409"
],
"inchi_key":[
"JSRLJPSBLDHEIO-SHYZEUOFSA-L"
],
"kegg.compound":[
"C00365"
],
"metanetx.chemical":[
"MNXM234"
],
"reactome.compound":[
"109382",
"500742"
],
"sabiork":[
"1334"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00299"
]
}
},
{
"id":"2m6sbenzq_c",
"name":"2-Methyl-6-solanyl-1,4-benzoquinol",
"compartment":"c",
"charge":0,
"formula":"C52H80O2",
"notes":{
"original_bigg_ids":[
"2m6sbenzq_c"
]
},
"annotation":{
"bigg.metabolite":[
"2m6sbenzq"
],
"sbo":"SBO:0000247"
}
},
{
"id":"fpram_c",
"name":"2-(Formamido)-N1-(5-phospho-D-ribosyl)acetamidine",
"compartment":"c",
"charge":-1,
"formula":"C8H15N3O8P",
"notes":{
"original_bigg_ids":[
"fpram_c"
]
},
"annotation":{
"bigg.metabolite":[
"fpram"
],
"chebi":[
"CHEBI:18413",
"CHEBI:58478",
"CHEBI:971",
"CHEBI:11474"
],
"hmdb":[
"HMDB06211"
],
"inchi_key":[
"PMCOGCVKOAOZQM-ZRTZXPPTSA-M"
],
"metanetx.chemical":[
"MNXM479745"
],
"reactome.compound":[
"111369"
],
"sbo":"SBO:0000247"
}
},
{
"id":"hco3_cx",
"name":"Bicarbonate",
"compartment":"cx",
"charge":-1,
"formula":"CHO3",
"notes":{
"original_bigg_ids":[
"hco3_cx"
]
},
"annotation":{
"bigg.metabolite":[
"hco3"
],
"biocyc":[
"META:CO3",
"META:H2CO3",
"META:HCO3"
],
"chebi":[
"CHEBI:13363",
"CHEBI:41605",
"CHEBI:13351",
"CHEBI:29201",
"CHEBI:22863",
"CHEBI:3401",
"CHEBI:23017",
"CHEBI:23744",
"CHEBI:40961",
"CHEBI:41609",
"CHEBI:17544",
"CHEBI:28976",
"CHEBI:5589"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/c78c72b7-2f2b-4dde-9f3d-80bb61a1da3e",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/34be09c7-8615-4ee1-806a-6a93ae28d922"
],
"hmdb":[
"HMDB03538",
"HMDB00595",
"HMDB31453"
],
"inchi_key":[
"BVKZGUZCCUSVTD-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01353",
"C00288"
],
"metanetx.chemical":[
"MNXM60"
],
"reactome.compound":[
"29896",
"425425",
"111627"
],
"sabiork":[
"1916",
"2275"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00242"
]
}
},
{
"id":"omppp9_c",
"name":"13(1)-Oxo-magnesium-protoporphyrin IX 13-monomethyl ester",
"compartment":"c",
"charge":-1,
"formula":"C35H31MgN4O5",
"notes":{
"original_bigg_ids":[
"omppp9_c"
]
},
"annotation":{
"bigg.metabolite":[
"omppp9"
],
"biocyc":[
"META:131-OXO-MAGNESIUM-PROTOPORPHYRIN-IX-13-M"
],
"chebi":[
"CHEBI:11323",
"CHEBI:10872",
"CHEBI:29464",
"CHEBI:77665",
"CHEBI:15433",
"CHEBI:60490"
],
"inchi_key":[
"IOQIILLGNAOXJE-JXBSUKTBSA-K"
],
"kegg.compound":[
"C11830"
],
"metanetx.chemical":[
"MNXM1352"
],
"sbo":"SBO:0000247"
}
},
{
"id":"ump_c",
"name":"UMP C9H11N2O9P",
"compartment":"c",
"charge":-2,
"formula":"C9H11N2O9P",
"notes":{
"original_bigg_ids":[
"ump_c"
]
},
"annotation":{
"bigg.metabolite":[
"ump"
],
"biocyc":[
"META:UMP"
],
"chebi":[
"CHEBI:47721",
"CHEBI:9849",
"CHEBI:27231",
"CHEBI:46382",
"CHEBI:16695",
"CHEBI:13509",
"CHEBI:13508",
"CHEBI:46385",
"CHEBI:57865",
"CHEBI:46362"
],
"hmdb":[
"HMDB00288"
],
"inchi_key":[
"DJJCXFVJDGTHFX-XVFCMESISA-L"
],
"kegg.compound":[
"C00105"
],
"metanetx.chemical":[
"MNXM80"
],
"reactome.compound":[
"735698",
"109402"
],
"sabiork":[
"1300",
"25061"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00091"
]
}
},
{
"id":"23dhmp_c",
"name":"(R)-2,3-Dihydroxy-3-methylpentanoate",
"compartment":"c",
"charge":-1,
"formula":"C6H11O4",
"notes":{
"original_bigg_ids":[
"23dhmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"23dhmp"
],
"biocyc":[
"META:1-KETO-2-METHYLVALERATE"
],
"chebi":[
"CHEBI:18646",
"CHEBI:49258",
"CHEBI:306",
"CHEBI:27512"
],
"hmdb":[
"HMDB12140"
],
"inchi_key":[
"PDGXJDXVGMHUIR-UJURSFKZSA-M"
],
"kegg.compound":[
"C06007"
],
"lipidmaps":[
"LMFA01050452"
],
"metanetx.chemical":[
"MNXM1202"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19046"
]
}
},
{
"id":"glu5p_c",
"name":"L-Glutamate 5-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H8NO7P",
"notes":{
"original_bigg_ids":[
"glu5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"glu5p"
],
"biocyc":[
"META:L-GLUTAMATE-5-P"
],
"chebi":[
"CHEBI:6230",
"CHEBI:58274",
"CHEBI:17798",
"CHEBI:13113",
"CHEBI:13108",
"CHEBI:21312"
],
"hmdb":[
"HMDB01228"
],
"inchi_key":[
"PJRXVIJAERNUIP-VKHMYHEASA-L"
],
"kegg.compound":[
"C03287"
],
"metanetx.chemical":[
"MNXM1280"
],
"sabiork":[
"1742"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02097"
]
}
},
{
"id":"3pg_cx",
"name":"3-Phospho-D-glycerate",
"compartment":"cx",
"charge":-3,
"formula":"C3H4O7P",
"notes":{
"original_bigg_ids":[
"3pg_cx"
]
},
"annotation":{
"bigg.metabolite":[
"3pg"
],
"biocyc":[
"META:G3P"
],
"chebi":[
"CHEBI:11879",
"CHEBI:11880",
"CHEBI:17794",
"CHEBI:21029",
"CHEBI:1657",
"CHEBI:58272",
"CHEBI:12987"
],
"hmdb":[
"HMDB60180"
],
"inchi_key":[
"OSJPPGNTCRNQQC-UWTATZPHSA-K"
],
"kegg.compound":[
"C00197"
],
"metanetx.chemical":[
"MNXM126"
],
"reactome.compound":[
"6799493",
"29728"
],
"sabiork":[
"21216"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00169"
]
}
},
{
"id":"3hmrsACP_c",
"name":"(R)-3-Hydroxytetradecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C14H27O2SR",
"notes":{
"original_bigg_ids":[
"3hmrsACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hmrsACP"
],
"biocyc":[
"META:R-3-hydroxymyristoyl-ACPs"
],
"kegg.compound":[
"C04688"
],
"metanetx.chemical":[
"MNXM7733"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11484"
]
}
},
{
"id":"gtp_c",
"name":"GTP C10H12N5O14P3",
"compartment":"c",
"charge":-4,
"formula":"C10H12N5O14P3",
"notes":{
"original_bigg_ids":[
"gtp_c"
]
},
"annotation":{
"bigg.metabolite":[
"gtp"
],
"biocyc":[
"META:GTP"
],
"chebi":[
"CHEBI:37565",
"CHEBI:15996",
"CHEBI:13342",
"CHEBI:57600",
"CHEBI:5234",
"CHEBI:42934",
"CHEBI:24451"
],
"hmdb":[
"HMDB01273"
],
"inchi_key":[
"XKMLYUALXHKNFT-UUOKFMHZSA-J"
],
"kegg.compound":[
"C00044"
],
"metanetx.chemical":[
"MNXM51"
],
"reactome.compound":[
"113573",
"29438"
],
"sabiork":[
"1282"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00038"
]
}
},
{
"id":"pq_cm",
"name":"Plastoquinone",
"compartment":"cm",
"charge":0,
"formula":"C53H80O2",
"notes":{
"original_bigg_ids":[
"pq_cm"
]
},
"annotation":{
"bigg.metabolite":[
"pq"
],
"metanetx.chemical":[
"MNXM145596"
],
"sbo":"SBO:0000247"
}
},
{
"id":"4c2me_c",
"name":"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol",
"compartment":"c",
"charge":-2,
"formula":"C14H23N3O14P2",
"notes":{
"original_bigg_ids":[
"4c2me_c"
]
},
"annotation":{
"bigg.metabolite":[
"4c2me"
],
"biocyc":[
"META:4-CYTIDINE-5-DIPHOSPHO-2-C"
],
"chebi":[
"CHEBI:16578",
"CHEBI:1770",
"CHEBI:57823",
"CHEBI:11938"
],
"inchi_key":[
"YFAUKWZNPVBCFF-XHIBXCGHSA-L"
],
"kegg.compound":[
"C11435"
],
"metanetx.chemical":[
"MNXM1642"
],
"sabiork":[
"13502"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08287"
]
}
},
{
"id":"ahdt_c",
"name":"2-Amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate",
"compartment":"c",
"charge":-4,
"formula":"C9H12N5O13P3",
"notes":{
"original_bigg_ids":[
"ahdt_c"
]
},
"annotation":{
"bigg.metabolite":[
"ahdt"
],
"biocyc":[
"META:DIHYDRONEOPTERIN-P3"
],
"chebi":[
"CHEBI:19455",
"CHEBI:18372",
"CHEBI:20684",
"CHEBI:28069",
"CHEBI:58462",
"CHEBI:1002",
"CHEBI:11509",
"CHEBI:12201"
],
"hmdb":[
"HMDB12181",
"HMDB01144",
"HMDB00980"
],
"inchi_key":[
"DGGUVLXVLHAAGT-XINAWCOVSA-J"
],
"kegg.compound":[
"C04895"
],
"metanetx.chemical":[
"MNXM397"
],
"reactome.compound":[
"1474124"
],
"sabiork":[
"7657",
"25345"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02978"
]
}
},
{
"id":"damp_c",
"name":"DAMP C10H12N5O6P",
"compartment":"c",
"charge":-2,
"formula":"C10H12N5O6P",
"notes":{
"original_bigg_ids":[
"damp_c"
]
},
"annotation":{
"bigg.metabolite":[
"damp"
],
"biocyc":[
"META:DAMP"
],
"chebi":[
"CHEBI:17713",
"CHEBI:40544",
"CHEBI:40607",
"CHEBI:41815",
"CHEBI:40614",
"CHEBI:41870",
"CHEBI:58245",
"CHEBI:41864",
"CHEBI:10490",
"CHEBI:40505",
"CHEBI:40499",
"CHEBI:19236",
"CHEBI:14068",
"CHEBI:40419"
],
"hmdb":[
"HMDB00905"
],
"inchi_key":[
"KHWCHTKSEGGWEX-RRKCRQDMSA-L"
],
"kegg.compound":[
"C00360"
],
"metanetx.chemical":[
"MNXM432"
],
"reactome.compound":[
"500088",
"109386"
],
"sabiork":[
"62"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00294"
]
}
},
{
"id":"4mop_c",
"name":"4-Methyl-2-oxopentanoate",
"compartment":"c",
"charge":-1,
"formula":"C6H9O3",
"notes":{
"original_bigg_ids":[
"4mop_c"
]
},
"annotation":{
"bigg.metabolite":[
"4mop"
],
"biocyc":[
"META:2K-4CH3-PENTANOATE"
],
"chebi":[
"CHEBI:1891",
"CHEBI:12020",
"CHEBI:20438",
"CHEBI:48430",
"CHEBI:41619",
"CHEBI:17865"
],
"hmdb":[
"HMDB00695",
"HMDB00762"
],
"inchi_key":[
"BKAJNAXTPSGJCU-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00233"
],
"metanetx.chemical":[
"MNXM404"
],
"sabiork":[
"1985"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00200"
]
}
},
{
"id":"histda_c",
"name":"L-histidinal",
"compartment":"c",
"charge":1,
"formula":"C6H10N3O",
"notes":{
"original_bigg_ids":[
"histda_c"
]
},
"annotation":{
"bigg.metabolite":[
"histda"
],
"sbo":"SBO:0000247"
}
},
{
"id":"4h2oglt_c",
"name":"4 Hydroxy 2 oxoglutarate C5H4O6",
"compartment":"c",
"charge":-2,
"formula":"C5H4O6",
"notes":{
"original_bigg_ids":[
"4h2oglt_c"
]
},
"annotation":{
"bigg.metabolite":[
"4h2oglt"
],
"biocyc":[
"META:CPD-15015"
],
"chebi":[
"CHEBI:20375",
"CHEBI:20374",
"CHEBI:11993",
"CHEBI:17742",
"CHEBI:36148",
"CHEBI:30923",
"CHEBI:1838"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/900696f3-15af-4276-a971-cc6603cd87a8"
],
"hmdb":[
"HMDB02070",
"HMDB01479"
],
"inchi_key":[
"WXSKVKPSMAHCSG-UHFFFAOYSA-L"
],
"kegg.compound":[
"C01127"
],
"metanetx.chemical":[
"MNXM894"
],
"sabiork":[
"2252"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00830"
]
}
},
{
"id":"npdp_c",
"name":"All-trans-Nonaprenyl diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C45H73O7P2",
"notes":{
"original_bigg_ids":[
"npdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"npdp"
],
"sbo":"SBO:0000247"
}
},
{
"id":"prfp_c",
"name":"1-(5-Phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide",
"compartment":"c",
"charge":-4,
"formula":"C15H21N5O15P2",
"notes":{
"original_bigg_ids":[
"prfp_c"
]
},
"annotation":{
"bigg.metabolite":[
"prfp"
],
"biocyc":[
"META:PHOSPHORIBOSYL-FORMIMINO-AICAR-P"
],
"chebi":[
"CHEBI:11194",
"CHEBI:75912",
"CHEBI:58435",
"CHEBI:2020",
"CHEBI:20528",
"CHEBI:18302"
],
"hmdb":[
"HMDB12277"
],
"inchi_key":[
"QOUSHGMTBIIAHR-KEOHHSTQSA-J"
],
"kegg.compound":[
"C04896"
],
"metanetx.chemical":[
"MNXM1397"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02979"
]
}
},
{
"id":"gthox_c",
"name":"Oxidized glutathione",
"compartment":"c",
"charge":-2,
"formula":"C20H30N6O12S2",
"notes":{
"original_bigg_ids":[
"gthox_c"
]
},
"annotation":{
"bigg.metabolite":[
"gthox"
],
"biocyc":[
"META:OXIDIZED-GLUTATHIONE"
],
"chebi":[
"CHEBI:42832",
"CHEBI:14328",
"CHEBI:17858",
"CHEBI:24336",
"CHEBI:7840",
"CHEBI:58297",
"CHEBI:14720"
],
"hmdb":[
"HMDB03337"
],
"inchi_key":[
"YPZRWBKMTBYPTK-BJDJZHNGSA-L"
],
"kegg.compound":[
"C00127"
],
"kegg.drug":[
"D00031"
],
"metanetx.chemical":[
"MNXM151"
],
"reactome.compound":[
"1655882",
"111745",
"3341331"
],
"sabiork":[
"1939"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00111"
]
}
},
{
"id":"dhor__S_c",
"name":"(S)-Dihydroorotate",
"compartment":"c",
"charge":-1,
"formula":"C5H5N2O4",
"notes":{
"original_bigg_ids":[
"dhor__S_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhor__S"
],
"biocyc":[
"META:DI-H-OROTATE"
],
"chebi":[
"CHEBI:417",
"CHEBI:11063",
"CHEBI:17025",
"CHEBI:30864",
"CHEBI:42132",
"CHEBI:18777",
"CHEBI:18778"
],
"hmdb":[
"HMDB03349"
],
"inchi_key":[
"UFIVEPVSAGBUSI-REOHCLBHSA-M"
],
"kegg.compound":[
"C00337"
],
"metanetx.chemical":[
"MNXM252"
],
"reactome.compound":[
"76630"
],
"sabiork":[
"2022"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00282"
]
}
},
{
"id":"amp_c",
"name":"AMP C10H12N5O7P",
"compartment":"c",
"charge":-2,
"formula":"C10H12N5O7P",
"notes":{
"original_bigg_ids":[
"amp_c"
]
},
"annotation":{
"bigg.metabolite":[
"amp"
],
"biocyc":[
"META:AMP-GROUP",
"META:AMP"
],
"chebi":[
"CHEBI:13736",
"CHEBI:2356",
"CHEBI:13234",
"CHEBI:22242",
"CHEBI:40786",
"CHEBI:16027",
"CHEBI:40721",
"CHEBI:40510",
"CHEBI:456215",
"CHEBI:13235",
"CHEBI:22245",
"CHEBI:40726",
"CHEBI:47222",
"CHEBI:13740",
"CHEBI:40826",
"CHEBI:12056"
],
"hmdb":[
"HMDB00045"
],
"inchi_key":[
"UDMBCSSLTHHNCD-KQYNXXCUSA-L"
],
"kegg.compound":[
"C00020"
],
"kegg.drug":[
"D02769"
],
"metanetx.chemical":[
"MNXM14"
],
"reactome.compound":[
"389620",
"159448",
"76577",
"109275",
"164121"
],
"sabiork":[
"1273"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd22272",
"cpd00018"
]
}
},
{
"id":"man1p_c",
"name":"D-Mannose 1-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O9P",
"notes":{
"original_bigg_ids":[
"man1p_c"
]
},
"annotation":{
"bigg.metabolite":[
"man1p"
],
"biocyc":[
"META:MANNOSE-1P"
],
"chebi":[
"CHEBI:35374",
"CHEBI:22404",
"CHEBI:4210",
"CHEBI:43854",
"CHEBI:12327",
"CHEBI:18205",
"CHEBI:58409",
"CHEBI:10261",
"CHEBI:21058"
],
"hmdb":[
"HMDB01436",
"HMDB06330"
],
"inchi_key":[
"HXXFSFRBOHSIMQ-RWOPYEJCSA-L"
],
"kegg.compound":[
"C00636"
],
"metanetx.chemical":[
"MNXM721"
],
"reactome.compound":[
"532531"
],
"sabiork":[
"1342"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00485"
]
}
},
{
"id":"3opalmACP_c",
"name":"3-Oxohexadecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C16H29O2RS",
"notes":{
"original_bigg_ids":[
"3opalmACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3opalmACP"
],
"biocyc":[
"META:3-oxo-palmitoyl-ACPs"
],
"chebi":[
"CHEBI:1639"
],
"kegg.compound":[
"C05762"
],
"lipidmaps":[
"LMFA07060019"
],
"metanetx.chemical":[
"MNXM4345"
],
"sabiork":[
"8122"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11485"
]
}
},
{
"id":"dxyl5p_c",
"name":"1-deoxy-D-xylulose 5-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H9O7P",
"notes":{
"original_bigg_ids":[
"dxyl5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"dxyl5p"
],
"biocyc":[
"META:DEOXYXYLULOSE-5P"
],
"chebi":[
"CHEBI:57792",
"CHEBI:11254",
"CHEBI:16493",
"CHEBI:622"
],
"hmdb":[
"HMDB01213"
],
"inchi_key":[
"AJPADPZSRRUGHI-RFZPGFLSSA-L"
],
"kegg.compound":[
"C11437"
],
"metanetx.chemical":[
"MNXM622"
],
"sabiork":[
"13504"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08289"
]
}
},
{
"id":"23dhmb_c",
"name":"(R)-2,3-Dihydroxy-3-methylbutanoate",
"compartment":"c",
"charge":-1,
"formula":"C5H9O4",
"notes":{
"original_bigg_ids":[
"23dhmb_c"
]
},
"annotation":{
"bigg.metabolite":[
"23dhmb"
],
"biocyc":[
"META:CPD-13357"
],
"chebi":[
"CHEBI:10966",
"CHEBI:18645",
"CHEBI:49072",
"CHEBI:15684",
"CHEBI:305"
],
"hmdb":[
"HMDB12141"
],
"inchi_key":[
"JTEYKUFKXGDTEU-VKHMYHEASA-M"
],
"kegg.compound":[
"C04272"
],
"lipidmaps":[
"LMFA01050453"
],
"metanetx.chemical":[
"MNXM114097"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19030"
]
}
},
{
"id":"glx_c",
"name":"Glyoxylate",
"compartment":"c",
"charge":-1,
"formula":"C2HO3",
"notes":{
"original_bigg_ids":[
"glx_c"
]
},
"annotation":{
"bigg.metabolite":[
"glx"
],
"biocyc":[
"META:GLYOX"
],
"chebi":[
"CHEBI:24420",
"CHEBI:36655",
"CHEBI:14368",
"CHEBI:24421",
"CHEBI:42767",
"CHEBI:16891",
"CHEBI:35977",
"CHEBI:5509"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/cdffdb1a-3322-4cc1-9171-d857bfaa198a",
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/aecbda66-6e98-4c11-aeaf-6a072f4f963c",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/9dc0aa3b-447a-4b5d-8157-501b036f9626",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/43b74f4f-bc8a-4b8b-b587-c97d8e9eed48"
],
"hmdb":[
"HMDB00119"
],
"inchi_key":[
"HHLFWLYXYJOTON-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00048"
],
"metanetx.chemical":[
"MNXM69"
],
"reactome.compound":[
"904849",
"389678"
],
"sabiork":[
"1838"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00040"
]
}
},
{
"id":"3hddecACP_c",
"name":"(R)-3-Hydroxydodecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C12H23O2SR",
"notes":{
"original_bigg_ids":[
"3hddecACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hddecACP"
],
"chebi":[
"CHEBI:325"
],
"kegg.compound":[
"C05757"
],
"lipidmaps":[
"LMFA07060015"
],
"metanetx.chemical":[
"MNXM27066"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11480"
]
}
},
{
"id":"thdp_c",
"name":"2,3,4,5-Tetrahydrodipicolinate",
"compartment":"c",
"charge":-2,
"formula":"C7H7NO4",
"notes":{
"original_bigg_ids":[
"thdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"thdp"
],
"biocyc":[
"META:DELTA1-PIPERIDEINE-2-6-DICARBOXYLATE"
],
"chebi":[
"CHEBI:11408",
"CHEBI:864",
"CHEBI:21189",
"CHEBI:6152",
"CHEBI:16845",
"CHEBI:18055",
"CHEBI:32976",
"CHEBI:13042"
],
"hmdb":[
"HMDB12289"
],
"inchi_key":[
"CXMBCXQHOXUCEO-BYPYZUCNSA-L"
],
"kegg.compound":[
"C03972"
],
"metanetx.chemical":[
"MNXM480"
],
"sabiork":[
"6990"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29199",
"cpd02465"
]
}
},
{
"id":"cu2_c",
"name":"Copper",
"compartment":"c",
"charge":2,
"formula":"Cu",
"notes":{
"original_bigg_ids":[
"cu2_c"
]
},
"annotation":{
"bigg.metabolite":[
"cu2"
],
"biocyc":[
"META:CU+2"
],
"chebi":[
"CHEBI:29036",
"CHEBI:23380",
"CHEBI:49550",
"CHEBI:20882"
],
"hmdb":[
"HMDB00657"
],
"inchi_key":[
"JPVYNHNXODAKFH-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00070"
],
"metanetx.chemical":[
"MNXM632"
],
"reactome.compound":[
"437295",
"936901",
"209799"
],
"sabiork":[
"19"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00058"
]
}
},
{
"id":"fprica_c",
"name":"5-Formamido-1-(5-phospho-D-ribosyl)imidazole-4-carboxamide",
"compartment":"c",
"charge":-2,
"formula":"C10H13N4O9P",
"notes":{
"original_bigg_ids":[
"fprica_c"
]
},
"annotation":{
"bigg.metabolite":[
"fprica"
],
"biocyc":[
"META:PHOSPHORIBOSYL-FORMAMIDO-CARBOXAMIDE"
],
"chebi":[
"CHEBI:18967",
"CHEBI:12125",
"CHEBI:574",
"CHEBI:58467",
"CHEBI:18381"
],
"hmdb":[
"HMDB62708",
"HMDB01439"
],
"inchi_key":[
"ABCOOORLYAOBOZ-KQYNXXCUSA-L"
],
"kegg.compound":[
"C04734"
],
"metanetx.chemical":[
"MNXM456"
],
"reactome.compound":[
"111427"
],
"sabiork":[
"1892"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02884"
]
}
},
{
"id":"malACP_c",
"name":"Malonyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-2,
"formula":"C3H2O3RS",
"notes":{
"original_bigg_ids":[
"malACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"malACP"
],
"biocyc":[
"META:MALONYL-ACP"
],
"chebi":[
"CHEBI:6662",
"CHEBI:14566",
"CHEBI:17330"
],
"kegg.compound":[
"C01209"
],
"metanetx.chemical":[
"MNXM184"
],
"sabiork":[
"5446"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11492"
]
}
},
{
"id":"adocbl_c",
"name":"Adenosylcobalamin",
"compartment":"c",
"charge":0,
"formula":"C72CoH100N18O17P",
"notes":{
"original_bigg_ids":[
"adocbl_c"
]
},
"annotation":{
"bigg.metabolite":[
"adocbl"
],
"biocyc":[
"META:ADENOSYLCOBALAMIN"
],
"hmdb":[
"HMDB02086"
],
"inchi_key":[
"ZIHHMGTYZOSFRC-QRVZQHAISA-N"
],
"kegg.compound":[
"C00194"
],
"kegg.drug":[
"D00042"
],
"metanetx.chemical":[
"MNXM90703"
],
"reactome.compound":[
"3159297"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00166"
]
}
},
{
"id":"2mahmp_c",
"name":"2-Methyl-4-amino-5-hydroxymethylpyrimidine diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C6H8N3O7P2",
"notes":{
"original_bigg_ids":[
"2mahmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"2mahmp"
],
"biocyc":[
"META:AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP"
],
"chebi":[
"CHEBI:16629",
"CHEBI:29079",
"CHEBI:19684",
"CHEBI:20308",
"CHEBI:11612",
"CHEBI:57841",
"CHEBI:11953",
"CHEBI:1194"
],
"inchi_key":[
"AGQJQCFEPUVXNK-UHFFFAOYSA-K"
],
"kegg.compound":[
"C04752"
],
"metanetx.chemical":[
"MNXM1135"
],
"sabiork":[
"1832"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02894"
]
}
},
{
"id":"5mdru1p_c",
"name":"5-Methylthio-5-deoxy-D-ribulose 1-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O7PS",
"notes":{
"original_bigg_ids":[
"5mdru1p_c"
]
},
"annotation":{
"bigg.metabolite":[
"5mdru1p"
],
"biocyc":[
"META:CPD-1063"
],
"chebi":[
"CHEBI:20615",
"CHEBI:44141",
"CHEBI:58548",
"CHEBI:2100",
"CHEBI:28096",
"CHEBI:12768"
],
"hmdb":[
"HMDB62647",
"HMDB01299"
],
"inchi_key":[
"CNSJRYUMVMWNMC-RITPCOANSA-L"
],
"kegg.compound":[
"C04582"
],
"metanetx.chemical":[
"MNXM522"
],
"reactome.compound":[
"1237107"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02791"
]
}
},
{
"id":"thr__L_c",
"name":"L-Threonine",
"compartment":"c",
"charge":0,
"formula":"C4H9NO3",
"notes":{
"original_bigg_ids":[
"thr__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"thr__L"
],
"biocyc":[
"META:THR"
],
"chebi":[
"CHEBI:16857",
"CHEBI:42083",
"CHEBI:32822",
"CHEBI:45843",
"CHEBI:57926",
"CHEBI:21403",
"CHEBI:32833",
"CHEBI:32820",
"CHEBI:13175",
"CHEBI:6308",
"CHEBI:45983",
"CHEBI:32832",
"CHEBI:26986"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b570a573-71c2-4661-a517-6ac1b121dc59"
],
"hmdb":[
"HMDB00167"
],
"inchi_key":[
"AYFVYJQAPQTCCC-GBXIJSLDSA-N"
],
"kegg.compound":[
"C00188"
],
"kegg.drug":[
"D00041"
],
"metanetx.chemical":[
"MNXM142"
],
"reactome.compound":[
"352000",
"351990",
"379706"
],
"sabiork":[
"76",
"27463"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00161"
]
}
},
{
"id":"so3_c",
"name":"Sulfite",
"compartment":"c",
"charge":-2,
"formula":"SO3",
"notes":{
"original_bigg_ids":[
"so3_c"
]
},
"annotation":{
"bigg.metabolite":[
"so3"
],
"biocyc":[
"META:H2SO3",
"META:HSO3",
"META:SO3"
],
"chebi":[
"CHEBI:15139",
"CHEBI:17137",
"CHEBI:45548",
"CHEBI:48854",
"CHEBI:26837",
"CHEBI:9344",
"CHEBI:5598",
"CHEBI:29214",
"CHEBI:13367",
"CHEBI:17359",
"CHEBI:33543"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/0382072e-fc0c-41a7-be8d-fce140ecf836",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/2bf998e0-031f-4353-bbd0-d9c0af36460e"
],
"hmdb":[
"HMDB34829",
"HMDB03008",
"HMDB01033",
"HMDB00240"
],
"inchi_key":[
"LSNNMFCWUKXFEE-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00094",
"C11481"
],
"metanetx.chemical":[
"MNXM105630"
],
"sabiork":[
"3059"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00081"
]
}
},
{
"id":"5g2oxpt_c",
"name":"2-Oxoarginine",
"compartment":"c",
"charge":0,
"formula":"C6H11N3O3",
"notes":{
"original_bigg_ids":[
"5g2oxpt_c"
]
},
"annotation":{
"bigg.metabolite":[
"5g2oxpt"
],
"biocyc":[
"META:CPD-824"
],
"chebi":[
"CHEBI:20572",
"CHEBI:1249",
"CHEBI:18253",
"CHEBI:28116",
"CHEBI:58489",
"CHEBI:12129",
"CHEBI:19740",
"CHEBI:2060"
],
"hmdb":[
"HMDB04225",
"HMDB06815"
],
"inchi_key":[
"ARBHXJXXVVHMET-UHFFFAOYSA-N"
],
"kegg.compound":[
"C03771"
],
"metanetx.chemical":[
"MNXM1037"
],
"sabiork":[
"6844"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02364",
"cpd03528"
]
}
},
{
"id":"dmpp_c",
"name":"Dimethylallyl diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C5H9O7P2",
"notes":{
"original_bigg_ids":[
"dmpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dmpp"
],
"biocyc":[
"META:CPD-4211"
],
"chebi":[
"CHEBI:14883",
"CHEBI:57623",
"CHEBI:8394",
"CHEBI:12280",
"CHEBI:4616",
"CHEBI:23803",
"CHEBI:16057",
"CHEBI:26245",
"CHEBI:341937",
"CHEBI:14169",
"CHEBI:42074",
"CHEBI:18108"
],
"hmdb":[
"HMDB02101",
"HMDB01120"
],
"inchi_key":[
"CBIDRCWHNCKSTO-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00235"
],
"lipidmaps":[
"LMPR01010001"
],
"metanetx.chemical":[
"MNXM132"
],
"reactome.compound":[
"1132235",
"6787596",
"191324"
],
"sabiork":[
"1986"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00202"
]
}
},
{
"id":"inost_c",
"name":"Myo-Inositol",
"compartment":"c",
"charge":0,
"formula":"C6H12O6",
"notes":{
"original_bigg_ids":[
"inost_c"
]
},
"annotation":{
"bigg.metabolite":[
"inost"
],
"biocyc":[
"META:CPD-8052",
"META:MYO-INOSITOL"
],
"chebi":[
"CHEBI:4200",
"CHEBI:12826",
"CHEBI:17268",
"CHEBI:27372",
"CHEBI:43559",
"CHEBI:25451",
"CHEBI:19183",
"CHEBI:24848",
"CHEBI:10601",
"CHEBI:52772",
"CHEBI:12831"
],
"hmdb":[
"HMDB02256",
"HMDB00211",
"HMDB34220"
],
"inchi_key":[
"CDAISMWEOUEBRE-GPIVLXJGSA-N"
],
"kegg.compound":[
"C00137",
"C19891"
],
"kegg.drug":[
"D08079"
],
"metanetx.chemical":[
"MNXM127"
],
"reactome.compound":[
"426910",
"429130"
],
"sabiork":[
"5010",
"25454"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd21131",
"cpd00121"
]
}
},
{
"id":"phpyr_c",
"name":"Phenylpyruvate",
"compartment":"c",
"charge":-1,
"formula":"C9H7O3",
"notes":{
"original_bigg_ids":[
"phpyr_c"
]
},
"annotation":{
"bigg.metabolite":[
"phpyr"
],
"biocyc":[
"META:PHENYL-PYRUVATE"
],
"chebi":[
"CHEBI:14784",
"CHEBI:26007",
"CHEBI:18005",
"CHEBI:12821"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/1a2c1780-502b-43c6-8d45-759953ea5e07"
],
"hmdb":[
"HMDB00205",
"HMDB31629",
"HMDB01237"
],
"inchi_key":[
"BTNMPGBKDVTSJY-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00166"
],
"metanetx.chemical":[
"MNXM162242"
],
"sabiork":[
"1957"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00143"
]
}
},
{
"id":"4hthdp_c",
"name":"(2S,4S)-4-Hydroxy-2,3,4,5-tetrahydrodipicolinate",
"compartment":"c",
"charge":-2,
"formula":"C7H7NO5",
"notes":{
"original_bigg_ids":[
"4hthdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"4hthdp"
],
"sbo":"SBO:0000247"
}
},
{
"id":"fe2_c",
"name":"Fe2+ mitochondria",
"compartment":"c",
"charge":2,
"formula":"Fe",
"notes":{
"original_bigg_ids":[
"fe2_c"
]
},
"annotation":{
"bigg.metabolite":[
"fe2"
],
"biocyc":[
"META:FE+2"
],
"chebi":[
"CHEBI:29033",
"CHEBI:49599",
"CHEBI:13321",
"CHEBI:21129",
"CHEBI:13319",
"CHEBI:24876",
"CHEBI:34754"
],
"hmdb":[
"HMDB00692"
],
"inchi_key":[
"CWYNVVGOOAEACU-UHFFFAOYSA-N"
],
"kegg.compound":[
"C14818"
],
"metanetx.chemical":[
"MNXM111"
],
"sabiork":[
"1275"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd10515"
]
}
},
{
"id":"mppp9_c",
"name":"Magnesium protoporphyrin",
"compartment":"c",
"charge":-2,
"formula":"C34H30MgN4O4",
"notes":{
"original_bigg_ids":[
"mppp9_c"
]
},
"annotation":{
"bigg.metabolite":[
"mppp9"
],
"biocyc":[
"META:MG-PROTOPORPHYRIN"
],
"chebi":[
"CHEBI:13378",
"CHEBI:15431",
"CHEBI:25109",
"CHEBI:6638",
"CHEBI:60492",
"CHEBI:14552",
"CHEBI:14553"
],
"inchi_key":[
"REJJDEGSUOCEEW-RGGAHWMASA-J"
],
"kegg.compound":[
"C03516"
],
"metanetx.chemical":[
"MNXM2254"
],
"sabiork":[
"6676"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02216"
]
}
},
{
"id":"applp_c",
"name":"D-1-Aminopropan-2-ol O-phosphate",
"compartment":"c",
"charge":-1,
"formula":"C3H9NO4P",
"notes":{
"original_bigg_ids":[
"applp_c"
]
},
"annotation":{
"bigg.metabolite":[
"applp"
],
"biocyc":[
"META:R-1-AMINOPROPAN-2-YL-PHOSPHATE"
],
"chebi":[
"CHEBI:58563",
"CHEBI:4076",
"CHEBI:20886",
"CHEBI:28390"
],
"inchi_key":[
"YBOLZUJJGUZUDC-GSVOUGTGSA-M"
],
"kegg.compound":[
"C04122"
],
"metanetx.chemical":[
"MNXM1697"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02547"
]
}
},
{
"id":"cdp_c",
"name":"CDP C9H12N3O11P2",
"compartment":"c",
"charge":-3,
"formula":"C9H12N3O11P2",
"notes":{
"original_bigg_ids":[
"cdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"cdp"
],
"biocyc":[
"META:CDP"
],
"chebi":[
"CHEBI:41451",
"CHEBI:23519",
"CHEBI:3260",
"CHEBI:13254",
"CHEBI:17239",
"CHEBI:58069"
],
"hmdb":[
"HMDB01546"
],
"inchi_key":[
"ZWIADYZPOWUWEW-XVFCMESISA-K"
],
"kegg.compound":[
"C00112"
],
"metanetx.chemical":[
"MNXM220"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00096"
]
}
},
{
"id":"oaa_c",
"name":"Oxaloacetate",
"compartment":"c",
"charge":-2,
"formula":"C4H2O5",
"notes":{
"original_bigg_ids":[
"oaa_c"
]
},
"annotation":{
"bigg.metabolite":[
"oaa"
],
"biocyc":[
"META:OXALACETIC_ACID"
],
"chebi":[
"CHEBI:25731",
"CHEBI:24959",
"CHEBI:12820",
"CHEBI:16452",
"CHEBI:30744",
"CHEBI:14703",
"CHEBI:24958",
"CHEBI:7812",
"CHEBI:25734",
"CHEBI:29049"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/133a11f3-81b0-4384-837e-1ccdd0a2a645",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/40afaad4-431a-4e3c-b4c7-020dbe4bdd2a",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/be7c543c-40bd-4698-9821-22f2e65c38f3"
],
"hmdb":[
"HMDB00223"
],
"inchi_key":[
"KHPXUQMNIQBQEV-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00036"
],
"lipidmaps":[
"LMFA01170120"
],
"metanetx.chemical":[
"MNXM46"
],
"reactome.compound":[
"6810070",
"113587",
"76213"
],
"sabiork":[
"1915"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00032"
]
}
},
{
"id":"dcaACP_c",
"name":"Decanoyl-ACP (n-C10:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C10H19ORS",
"notes":{
"original_bigg_ids":[
"dcaACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"dcaACP"
],
"metanetx.chemical":[
"MNXM90236"
],
"sbo":"SBO:0000247"
}
},
{
"id":"phllqne_c",
"name":"Phylloquinone",
"compartment":"c",
"charge":0,
"formula":"C31H46O2",
"notes":{
"original_bigg_ids":[
"phyQ_c"
]
},
"annotation":{
"bigg.metabolite":[
"phllqne"
],
"biocyc":[
"META:2-METHYL-3-PHYTYL-14-NAPHTHOQUINONE"
],
"chebi":[
"CHEBI:8181",
"CHEBI:18067",
"CHEBI:45148",
"CHEBI:26105",
"CHEBI:14833",
"CHEBI:11611",
"CHEBI:94399"
],
"hmdb":[
"HMDB03596",
"HMDB04198",
"HMDB03555",
"HMDB15157"
],
"inchi_key":[
"MBWXNTAXLNYFJB-NKFFZRIASA-N"
],
"kegg.compound":[
"C02059"
],
"kegg.drug":[
"D00148"
],
"lipidmaps":[
"LMPR02030028"
],
"metanetx.chemical":[
"MNXM1155"
],
"sabiork":[
"5972"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01401"
]
}
},
{
"id":"toct2eACP_c",
"name":"Trans-Oct-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C8H13OSR",
"notes":{
"original_bigg_ids":[
"toct2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"toct2eACP"
],
"biocyc":[
"META:2-Octenoyl-ACPs"
],
"kegg.compound":[
"C05751"
],
"lipidmaps":[
"LMFA07060009"
],
"metanetx.chemical":[
"MNXM23766"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11471"
]
}
},
{
"id":"2me4p_c",
"name":"2-C-methyl-D-erythritol 4-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H11O7P",
"notes":{
"original_bigg_ids":[
"2me4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"2me4p"
],
"biocyc":[
"META:2-C-METHYL-D-ERYTHRITOL-4-PHOSPHATE"
],
"chebi":[
"CHEBI:58262",
"CHEBI:17764",
"CHEBI:11483",
"CHEBI:1030"
],
"inchi_key":[
"XMWHRVNVKDKBRG-UHNVWZDZSA-L"
],
"kegg.compound":[
"C11434"
],
"metanetx.chemical":[
"MNXM1626"
],
"sabiork":[
"13501"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08286"
]
}
},
{
"id":"3hpalmACP_c",
"name":"R-3-hydroxypalmitoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C16H31O2SR",
"notes":{
"original_bigg_ids":[
"3hpalmACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hpalmACP"
],
"kegg.compound":[
"C04633"
],
"metanetx.chemical":[
"MNXM2576"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11481"
]
}
},
{
"id":"dgdp_c",
"name":"DGDP C10H12N5O10P2",
"compartment":"c",
"charge":-3,
"formula":"C10H12N5O10P2",
"notes":{
"original_bigg_ids":[
"dgdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dgdp"
],
"biocyc":[
"META:DGDP"
],
"chebi":[
"CHEBI:58595",
"CHEBI:19245",
"CHEBI:41949",
"CHEBI:28862",
"CHEBI:10495"
],
"hmdb":[
"HMDB00960"
],
"inchi_key":[
"CIKGWCTVFSRMJU-KVQBGUIXSA-K"
],
"kegg.compound":[
"C00361"
],
"metanetx.chemical":[
"MNXM436"
],
"reactome.compound":[
"500077"
],
"sabiork":[
"1677"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00295"
]
}
},
{
"id":"no3_c",
"name":"Nitrate",
"compartment":"c",
"charge":-1,
"formula":"NO3",
"notes":{
"original_bigg_ids":[
"no3_c"
]
},
"annotation":{
"bigg.metabolite":[
"no3"
],
"biocyc":[
"META:NITRATE",
"META:CPD-15028"
],
"chebi":[
"CHEBI:44487",
"CHEBI:14654",
"CHEBI:71263",
"CHEBI:7580",
"CHEBI:17632",
"CHEBI:48107",
"CHEBI:25545"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/706be27f-b4cf-4022-b2ef-04cec5197ca5"
],
"hmdb":[
"HMDB02878",
"HMDB01853"
],
"inchi_key":[
"NHNBFGGVMKEFGY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00244"
],
"kegg.drug":[
"D02313"
],
"metanetx.chemical":[
"MNXM207"
],
"sabiork":[
"1988"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00209"
]
}
},
{
"id":"uaccg_c",
"name":"UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine",
"compartment":"c",
"charge":-3,
"formula":"C20H26N3O19P2",
"notes":{
"original_bigg_ids":[
"uaccg_c"
]
},
"annotation":{
"bigg.metabolite":[
"uaccg"
],
"biocyc":[
"META:UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE"
],
"chebi":[
"CHEBI:68507",
"CHEBI:16435",
"CHEBI:22110",
"CHEBI:13467",
"CHEBI:13466",
"CHEBI:68483",
"CHEBI:57771",
"CHEBI:9818"
],
"inchi_key":[
"BEGZZYPUNCJHKP-DBYWSUQTSA-K"
],
"kegg.compound":[
"C04631"
],
"metanetx.chemical":[
"MNXM1688"
],
"sabiork":[
"7450"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02820"
]
}
},
{
"id":"2ahbut_c",
"name":"(S)-2-Aceto-2-hydroxybutanoate",
"compartment":"c",
"charge":-1,
"formula":"C6H9O4",
"notes":{
"original_bigg_ids":[
"2ahbut_c"
]
},
"annotation":{
"bigg.metabolite":[
"2ahbut"
],
"biocyc":[
"META:2-ACETO-2-HYDROXY-BUTYRATE"
],
"chebi":[
"CHEBI:27681",
"CHEBI:49256",
"CHEBI:18730",
"CHEBI:373"
],
"hmdb":[
"HMDB06854",
"HMDB06900"
],
"inchi_key":[
"VUQLHQFKACOHNZ-LURJTMIESA-M"
],
"kegg.compound":[
"C06006"
],
"lipidmaps":[
"LMFA01050383"
],
"metanetx.chemical":[
"MNXM114220"
],
"sabiork":[
"2852"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19045"
]
}
},
{
"id":"acald_c",
"name":"Acetaldehyde",
"compartment":"c",
"charge":0,
"formula":"C2H4O",
"notes":{
"original_bigg_ids":[
"acald_c"
]
},
"annotation":{
"bigg.metabolite":[
"acald"
],
"biocyc":[
"META:ACETALD"
],
"chebi":[
"CHEBI:40533",
"CHEBI:13703",
"CHEBI:2383",
"CHEBI:22158",
"CHEBI:15343"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/9c8865b2-a99d-42e4-a042-c88504f04b51",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/47aa8e53-36ae-4be3-987c-c1cfab66af78",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/ee2c714d-ff9d-4df8-b343-48c1ec76ef0e",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/78f3645f-408e-4001-9dda-a52ea62a15d4"
],
"hmdb":[
"HMDB00990"
],
"inchi_key":[
"IKHGUXGNUITLKF-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00084"
],
"metanetx.chemical":[
"MNXM75"
],
"reactome.compound":[
"113532",
"29510",
"113681",
"113745"
],
"sabiork":[
"1292"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00071"
]
}
},
{
"id":"uamag_c",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate",
"compartment":"c",
"charge":-4,
"formula":"C28H39N5O23P2",
"notes":{
"original_bigg_ids":[
"uamag_c"
]
},
"annotation":{
"bigg.metabolite":[
"uamag"
],
"biocyc":[
"META:UDP-AA-GLUTAMATE"
],
"chebi":[
"CHEBI:16970",
"CHEBI:13461",
"CHEBI:13482",
"CHEBI:9832",
"CHEBI:46143",
"CHEBI:22125",
"CHEBI:57968",
"CHEBI:83900"
],
"inchi_key":[
"OJZCATPXPWFLHF-HPUCEMLMSA-J"
],
"kegg.compound":[
"C00692"
],
"metanetx.chemical":[
"MNXM955"
],
"sabiork":[
"5185"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00525"
]
}
},
{
"id":"o2s_c",
"name":"Superoxide anion",
"compartment":"c",
"charge":-1,
"formula":"O2",
"notes":{
"original_bigg_ids":[
"o2s_c"
]
},
"annotation":{
"bigg.metabolite":[
"o2s"
],
"biocyc":[
"META:SUPER-OXIDE"
],
"chebi":[
"CHEBI:25935",
"CHEBI:30492",
"CHEBI:7710",
"CHEBI:18421",
"CHEBI:15143",
"CHEBI:26839"
],
"hmdb":[
"HMDB02168"
],
"inchi_key":[
"OUUQCZGPVNCOIJ-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00704"
],
"metanetx.chemical":[
"MNXM330"
],
"reactome.compound":[
"1222461",
"1475048",
"1470070"
],
"sabiork":[
"5191"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dialurate_c",
"name":"Dialurate",
"compartment":"c",
"charge":0,
"formula":"C4H4N2O3",
"notes":{
"original_bigg_ids":[
"dialurate_c"
]
},
"annotation":{
"bigg.metabolite":[
"dialurate"
],
"sbo":"SBO:0000247"
}
},
{
"id":"caro_c",
"name":"Beta-Carotene",
"compartment":"c",
"charge":0,
"formula":"C40H56",
"notes":{
"original_bigg_ids":[
"caro_c"
]
},
"annotation":{
"bigg.metabolite":[
"caro"
],
"biocyc":[
"META:CPD1F-129"
],
"chebi":[
"CHEBI:22834",
"CHEBI:12392",
"CHEBI:10355",
"CHEBI:17579",
"CHEBI:40987"
],
"hmdb":[
"HMDB00561"
],
"inchi_key":[
"OENHQHLEOONYIE-JLTXGRSLSA-N"
],
"kegg.compound":[
"C02094"
],
"kegg.drug":[
"D03101"
],
"lipidmaps":[
"LMPR01070001",
"LMPR01070000"
],
"metanetx.chemical":[
"MNXM614"
],
"reactome.compound":[
"5164389",
"975643"
],
"sabiork":[
"5998"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01420"
]
}
},
{
"id":"gcarote_c",
"name":"Gamma-Carotene",
"compartment":"c",
"charge":0,
"formula":"C40H56",
"notes":{
"original_bigg_ids":[
"gcaro_c"
]
},
"annotation":{
"bigg.metabolite":[
"gcarote"
],
"biocyc":[
"META:CPD1F-126"
],
"chebi":[
"CHEBI:27740",
"CHEBI:10560",
"CHEBI:24189"
],
"inchi_key":[
"HRQKOYFGHJYEFS-BXOLYSJBSA-N"
],
"kegg.compound":[
"C05435"
],
"lipidmaps":[
"LMPR01070260"
],
"metanetx.chemical":[
"MNXM1048"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03220"
]
}
},
{
"id":"3dhq_c",
"name":"3-Dehydroquinate",
"compartment":"c",
"charge":-1,
"formula":"C7H9O6",
"notes":{
"original_bigg_ids":[
"3dhq_c"
]
},
"annotation":{
"bigg.metabolite":[
"3dhq"
],
"biocyc":[
"META:DEHYDROQUINATE"
],
"chebi":[
"CHEBI:19997",
"CHEBI:32364",
"CHEBI:1487",
"CHEBI:12122",
"CHEBI:17947",
"CHEBI:11781",
"CHEBI:42078"
],
"hmdb":[
"HMDB12710"
],
"inchi_key":[
"WVMWZWGZRAXUBK-SYTVJDICSA-M"
],
"kegg.compound":[
"C00944"
],
"metanetx.chemical":[
"MNXM478"
],
"reactome.compound":[
"964921"
],
"sabiork":[
"27311",
"5328"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00699"
]
}
},
{
"id":"ser__L_c",
"name":"L-Serine",
"compartment":"c",
"charge":0,
"formula":"C3H7NO3",
"notes":{
"original_bigg_ids":[
"ser__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"ser__L"
],
"biocyc":[
"META:SER",
"META:Serines"
],
"chebi":[
"CHEBI:32845",
"CHEBI:17822",
"CHEBI:26648",
"CHEBI:45440",
"CHEBI:21387",
"CHEBI:32837",
"CHEBI:13167",
"CHEBI:45451",
"CHEBI:32836",
"CHEBI:15081",
"CHEBI:45590",
"CHEBI:35243",
"CHEBI:32846",
"CHEBI:17115",
"CHEBI:45597",
"CHEBI:33384",
"CHEBI:45677",
"CHEBI:6301",
"CHEBI:9116"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/207ebcd7-f859-4b01-8a69-9b99fb380595"
],
"hmdb":[
"HMDB00589",
"HMDB00187",
"HMDB62263"
],
"inchi_key":[
"MTCFGRXMJLQNBG-REOHCLBHSA-N"
],
"kegg.compound":[
"C00716",
"C00065"
],
"kegg.drug":[
"D00016"
],
"lipidmaps":[
"LMFA01100045"
],
"metanetx.chemical":[
"MNXM53"
],
"reactome.compound":[
"352002",
"379732",
"8932979",
"200736"
],
"sabiork":[
"2140",
"75"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd28171",
"cpd00054",
"cpd30743"
]
}
},
{
"id":"4adcho_c",
"name":"4-amino-4-deoxychorismate",
"compartment":"c",
"charge":-1,
"formula":"C10H10NO5",
"notes":{
"original_bigg_ids":[
"4adcho_c"
]
},
"annotation":{
"bigg.metabolite":[
"4adcho"
],
"biocyc":[
"META:4-AMINO-4-DEOXYCHORISMATE"
],
"chebi":[
"CHEBI:35181",
"CHEBI:11956",
"CHEBI:18198",
"CHEBI:58406",
"CHEBI:1943",
"CHEBI:35180"
],
"inchi_key":[
"OIUJHGOLFKDBSU-HTQZYQBOSA-M"
],
"kegg.compound":[
"C11355"
],
"metanetx.chemical":[
"MNXM1458"
],
"sabiork":[
"13425"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08210"
]
}
},
{
"id":"glu__L_c",
"name":"L-Glutamate",
"compartment":"c",
"charge":-1,
"formula":"C5H8NO4",
"notes":{
"original_bigg_ids":[
"glu__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"glu__L"
],
"biocyc":[
"META:Glutamates",
"META:GLT"
],
"chebi":[
"CHEBI:76051",
"CHEBI:21301",
"CHEBI:29985",
"CHEBI:42825",
"CHEBI:29987",
"CHEBI:18237",
"CHEBI:24314",
"CHEBI:16015",
"CHEBI:13107",
"CHEBI:5431",
"CHEBI:21304",
"CHEBI:6224",
"CHEBI:14321",
"CHEBI:29988"
],
"hmdb":[
"HMDB00148",
"HMDB60475"
],
"inchi_key":[
"WHUUTDBJXJRKMK-VKHMYHEASA-M"
],
"kegg.compound":[
"C00025",
"C00302"
],
"kegg.drug":[
"D00007",
"D04341"
],
"metanetx.chemical":[
"MNXM89557"
],
"reactome.compound":[
"428614",
"29404",
"113552",
"210382"
],
"sabiork":[
"73",
"2010"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27177",
"cpd00023",
"cpd19002"
]
}
},
{
"id":"1pyr5c_c",
"name":"1-Pyrroline-5-carboxylate",
"compartment":"c",
"charge":-1,
"formula":"C5H6NO2",
"notes":{
"original_bigg_ids":[
"1pyr5c_c"
]
},
"annotation":{
"bigg.metabolite":[
"1pyr5c"
],
"biocyc":[
"META:L-DELTA1-PYRROLINE_5-CARBOXYLATE"
],
"chebi":[
"CHEBI:11297",
"CHEBI:26458",
"CHEBI:18727",
"CHEBI:371",
"CHEBI:15893",
"CHEBI:29066",
"CHEBI:11689",
"CHEBI:1372",
"CHEBI:17388",
"CHEBI:12409",
"CHEBI:19873",
"CHEBI:19095"
],
"hmdb":[
"HMDB01301",
"HMDB02240"
],
"inchi_key":[
"DWAKNKKXGALPNW-UHFFFAOYSA-M"
],
"kegg.compound":[
"C03912",
"C04322"
],
"metanetx.chemical":[
"MNXM1617"
],
"reactome.compound":[
"113590",
"35305"
],
"sabiork":[
"6942",
"7234"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29655",
"cpd02651",
"cpd02431"
]
}
},
{
"id":"bm_cofactors_c",
"name":"Biomass metabolite: cofactors and ions",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_cofactors_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_cofactors"
],
"sbo":"SBO:0000247"
}
},
{
"id":"phytfl_c",
"name":"All-trans-Phytofluene",
"compartment":"c",
"charge":0,
"formula":"C40H62",
"notes":{
"original_bigg_ids":[
"phytfl_c"
]
},
"annotation":{
"bigg.metabolite":[
"phytfl"
],
"metanetx.chemical":[
"MNXM148438"
],
"sbo":"SBO:0000247"
}
},
{
"id":"ppi_c",
"name":"Diphosphate",
"compartment":"c",
"charge":-3,
"formula":"HO7P2",
"notes":{
"original_bigg_ids":[
"ppi_c"
]
},
"annotation":{
"bigg.metabolite":[
"ppi"
],
"biocyc":[
"META:PYROPHOSPHATE-GROUP",
"META:PPI"
],
"chebi":[
"CHEBI:45212",
"CHEBI:45208",
"CHEBI:8683",
"CHEBI:45067",
"CHEBI:33018",
"CHEBI:29888",
"CHEBI:33017",
"CHEBI:33019",
"CHEBI:42009",
"CHEBI:13420",
"CHEBI:18361"
],
"hmdb":[
"HMDB00250"
],
"inchi_key":[
"XPPKVPWEQAFLFU-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00013"
],
"metanetx.chemical":[
"MNXM11"
],
"reactome.compound":[
"159450",
"113542",
"8878981",
"389593",
"113541",
"8938078",
"111294",
"2046049",
"6806656",
"1132084"
],
"sabiork":[
"1267"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00012",
"cpd27828"
]
}
},
{
"id":"34hpp_c",
"name":"3-(4-Hydroxyphenyl)pyruvate",
"compartment":"c",
"charge":-1,
"formula":"C9H7O4",
"notes":{
"original_bigg_ids":[
"34hpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"34hpp"
],
"biocyc":[
"META:P-HYDROXY-PHENYLPYRUVATE"
],
"chebi":[
"CHEBI:36242",
"CHEBI:20425",
"CHEBI:20426",
"CHEBI:12016",
"CHEBI:15999",
"CHEBI:11725",
"CHEBI:594665",
"CHEBI:11727",
"CHEBI:42422",
"CHEBI:1431"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/f2e806ef-76ea-4ddf-bf89-db7737caa79b"
],
"hmdb":[
"HMDB00707"
],
"inchi_key":[
"KKADPXVIOXHVKN-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01179"
],
"metanetx.chemical":[
"MNXM153"
],
"reactome.compound":[
"31365"
],
"sabiork":[
"5423"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00868"
]
}
},
{
"id":"ribflv_c",
"name":"Riboflavin C17H20N4O6",
"compartment":"c",
"charge":-1,
"formula":"C17H19N4O6",
"notes":{
"original_bigg_ids":[
"ribflv_c"
]
},
"annotation":{
"bigg.metabolite":[
"ribflv"
],
"biocyc":[
"META:RIBOFLAVIN"
],
"chebi":[
"CHEBI:57986",
"CHEBI:17015",
"CHEBI:8843",
"CHEBI:45214",
"CHEBI:15044",
"CHEBI:529204",
"CHEBI:27299"
],
"hmdb":[
"HMDB00244"
],
"inchi_key":[
"AUNGANRZJHBGPY-SCRDCRAPSA-M"
],
"kegg.compound":[
"C00255"
],
"kegg.drug":[
"D00050"
],
"metanetx.chemical":[
"MNXM270"
],
"reactome.compound":[
"3165253",
"196931"
],
"sabiork":[
"1996"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00220"
]
}
},
{
"id":"ctp_c",
"name":"CTP C9H12N3O14P3",
"compartment":"c",
"charge":-4,
"formula":"C9H12N3O14P3",
"notes":{
"original_bigg_ids":[
"ctp_c"
]
},
"annotation":{
"bigg.metabolite":[
"ctp"
],
"biocyc":[
"META:CTP"
],
"chebi":[
"CHEBI:3285",
"CHEBI:23522",
"CHEBI:41675",
"CHEBI:58231",
"CHEBI:37563",
"CHEBI:13286",
"CHEBI:17677"
],
"hmdb":[
"HMDB00082"
],
"inchi_key":[
"PCDQPRRSZKQHHS-XVFCMESISA-J"
],
"kegg.compound":[
"C00063"
],
"metanetx.chemical":[
"MNXM63"
],
"reactome.compound":[
"29470",
"110614",
"110577"
],
"sabiork":[
"1286"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00052"
]
}
},
{
"id":"alac__S_c",
"name":"(S)-2-Acetolactate",
"compartment":"c",
"charge":-1,
"formula":"C5H7O4",
"notes":{
"original_bigg_ids":[
"alac__S_c"
]
},
"annotation":{
"bigg.metabolite":[
"alac__S"
],
"biocyc":[
"META:2-ACETO-LACTATE"
],
"chebi":[
"CHEBI:11033",
"CHEBI:374",
"CHEBI:18409",
"CHEBI:18731",
"CHEBI:58476"
],
"hmdb":[
"HMDB06855"
],
"inchi_key":[
"NMDWGEGFJUBKLB-YFKPBYRVSA-M"
],
"kegg.compound":[
"C06010"
],
"lipidmaps":[
"LMFA01050460"
],
"metanetx.chemical":[
"MNXM114079"
],
"sabiork":[
"2855"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19047"
]
}
},
{
"id":"tyr__L_c",
"name":"L-Tyrosine",
"compartment":"c",
"charge":0,
"formula":"C9H11NO3",
"notes":{
"original_bigg_ids":[
"tyr__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"tyr__L"
],
"biocyc":[
"META:TYR"
],
"chebi":[
"CHEBI:6313",
"CHEBI:21411",
"CHEBI:46070",
"CHEBI:9800",
"CHEBI:32786",
"CHEBI:15277",
"CHEBI:32761",
"CHEBI:32784",
"CHEBI:46161",
"CHEBI:13181",
"CHEBI:32760",
"CHEBI:58315",
"CHEBI:32762",
"CHEBI:27176",
"CHEBI:17895",
"CHEBI:18186",
"CHEBI:32785"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/974bd9b7-53fb-48cd-aaf3-6bd3196c0365"
],
"hmdb":[
"HMDB00647",
"HMDB00158"
],
"inchi_key":[
"OUYCCCASQSFEME-QMMMGPOBSA-N"
],
"kegg.compound":[
"C00082",
"C01536"
],
"kegg.drug":[
"D00022"
],
"metanetx.chemical":[
"MNXM76"
],
"reactome.compound":[
"379710",
"5668567",
"352030",
"29506"
],
"sabiork":[
"84",
"2291"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30745",
"cpd00069"
]
}
},
{
"id":"3hmop_c",
"name":"(R)-3-Hydroxy-3-methyl-2-oxopentanoate",
"compartment":"c",
"charge":-1,
"formula":"C6H9O4",
"notes":{
"original_bigg_ids":[
"3hmop_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hmop"
],
"biocyc":[
"META:CPD-15104"
],
"chebi":[
"CHEBI:34008",
"CHEBI:49257"
],
"inchi_key":[
"YJVOWRAWFXRESP-ZCFIWIBFSA-M"
],
"kegg.compound":[
"C14463"
],
"lipidmaps":[
"LMFA01050457"
],
"metanetx.chemical":[
"MNXM114594"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd10162"
]
}
},
{
"id":"pqh2_cm",
"name":"Plastoquinol",
"compartment":"cm",
"charge":0,
"formula":"C53H82O2",
"notes":{
"original_bigg_ids":[
"pqh2_cm"
]
},
"annotation":{
"bigg.metabolite":[
"pqh2"
],
"metanetx.chemical":[
"MNXM145595"
],
"sbo":"SBO:0000247"
}
},
{
"id":"fad_c",
"name":"Flavin adenine dinucleotide oxidized",
"compartment":"c",
"charge":-2,
"formula":"C27H31N9O15P2",
"notes":{
"original_bigg_ids":[
"fad_c"
]
},
"annotation":{
"bigg.metabolite":[
"fad"
],
"biocyc":[
"META:FAD"
],
"chebi":[
"CHEBI:16238",
"CHEBI:42388",
"CHEBI:21125",
"CHEBI:57692",
"CHEBI:13315",
"CHEBI:4956"
],
"hmdb":[
"HMDB01248"
],
"inchi_key":[
"IMGVNJNCCGXBHD-UYBVJOGSSA-K"
],
"kegg.compound":[
"C00016"
],
"kegg.drug":[
"D00005"
],
"metanetx.chemical":[
"MNXM33"
],
"reactome.compound":[
"113596",
"29386",
"113597"
],
"sabiork":[
"1270"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00015"
]
}
},
{
"id":"pap_c",
"name":"Adenosine 3',5'-bisphosphate",
"compartment":"c",
"charge":-4,
"formula":"C10H11N5O10P2",
"notes":{
"original_bigg_ids":[
"pap_c"
]
},
"annotation":{
"bigg.metabolite":[
"pap"
],
"biocyc":[
"META:3-5-ADP"
],
"chebi":[
"CHEBI:17985",
"CHEBI:13735",
"CHEBI:22240",
"CHEBI:2475",
"CHEBI:58343"
],
"hmdb":[
"HMDB01468",
"HMDB00061"
],
"inchi_key":[
"WHTCPDAXWFLDIH-KQYNXXCUSA-J"
],
"kegg.compound":[
"C00054"
],
"metanetx.chemical":[
"MNXM45"
],
"reactome.compound":[
"158466",
"742343",
"8942170",
"6809360"
],
"sabiork":[
"1672"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00045"
]
}
},
{
"id":"2shchc_c",
"name":"2-Succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate",
"compartment":"c",
"charge":-2,
"formula":"C11H10O6",
"notes":{
"original_bigg_ids":[
"2shchc_c"
]
},
"annotation":{
"bigg.metabolite":[
"2shchc"
],
"biocyc":[
"META:CPD-9923"
],
"chebi":[
"CHEBI:39564",
"CHEBI:58689"
],
"inchi_key":[
"QJYRAJSESKVEAE-PSASIEDQSA-L"
],
"kegg.compound":[
"C05817"
],
"metanetx.chemical":[
"MNXM1249"
],
"sabiork":[
"8173"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03451"
]
}
},
{
"id":"oxa_c",
"name":"Oxalate",
"compartment":"c",
"charge":-2,
"formula":"C2O4",
"notes":{
"original_bigg_ids":[
"oxa_c"
]
},
"annotation":{
"bigg.metabolite":[
"oxa"
],
"biocyc":[
"META:OXALATE"
],
"chebi":[
"CHEBI:46904",
"CHEBI:14702",
"CHEBI:44583",
"CHEBI:132952",
"CHEBI:30623",
"CHEBI:44820",
"CHEBI:7811",
"CHEBI:25730",
"CHEBI:16995",
"CHEBI:25729"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/33fed278-dbd7-421a-aac0-6c9da2f52882",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/09f794f3-250c-406d-9481-e8bd691395c0",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/c85291d2-bb9f-4f78-b6d0-c543bc53b2dc",
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/96c40666-898b-4e97-bdfe-43dc9d76caed"
],
"hmdb":[
"HMDB02329"
],
"inchi_key":[
"MUBZPKHOEPUJKR-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00209"
],
"metanetx.chemical":[
"MNXM291"
],
"reactome.compound":[
"389819"
],
"sabiork":[
"1975"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00180"
]
}
},
{
"id":"dhna_c",
"name":"1,4-Dihydroxy-2-naphthoate",
"compartment":"c",
"charge":-1,
"formula":"C11H7O4",
"notes":{
"original_bigg_ids":[
"dhna_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhna"
],
"biocyc":[
"META:DIHYDROXYNAPHTHOATE"
],
"chebi":[
"CHEBI:11173",
"CHEBI:539",
"CHEBI:18933",
"CHEBI:18094"
],
"inchi_key":[
"VOJUXHHACRXLTD-UHFFFAOYSA-M"
],
"kegg.compound":[
"C03657"
],
"metanetx.chemical":[
"MNXM552"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02295"
]
}
},
{
"id":"25dhpp_c",
"name":"2 5 Diamino 6 hydroxy 4  5  phosphoribosylamino  pyrimidine C9H14N5O8P",
"compartment":"c",
"charge":-2,
"formula":"C9H14N5O8P",
"notes":{
"original_bigg_ids":[
"25dhpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"25dhpp"
],
"metanetx.chemical":[
"MNXM90906"
],
"sbo":"SBO:0000247"
}
},
{
"id":"co2_cx",
"name":"CO2 CO2",
"compartment":"cx",
"charge":0,
"formula":"CO2",
"notes":{
"original_bigg_ids":[
"co2_cx"
]
},
"annotation":{
"bigg.metabolite":[
"co2"
],
"biocyc":[
"META:CARBON-DIOXIDE"
],
"chebi":[
"CHEBI:23011",
"CHEBI:3283",
"CHEBI:48829",
"CHEBI:16526",
"CHEBI:13283",
"CHEBI:13285",
"CHEBI:13284",
"CHEBI:13282"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2ec3da94-5f50-4525-81b1-5607c5c7a3d3",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/05f60af4-0a3f-4ead-9a29-33bb0f123379"
],
"hmdb":[
"HMDB01967"
],
"inchi_key":[
"CURLTUGMZLYLDI-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00011"
],
"kegg.drug":[
"D00004"
],
"metanetx.chemical":[
"MNXM13"
],
"reactome.compound":[
"29376",
"5668565",
"189480",
"1132345",
"113528",
"1237009",
"159751",
"389536",
"159942"
],
"sabiork":[
"1266"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00011"
]
}
},
{
"id":"4abz_c",
"name":"4-Aminobenzoate",
"compartment":"c",
"charge":-1,
"formula":"C7H6NO2",
"notes":{
"original_bigg_ids":[
"4abz_c"
]
},
"annotation":{
"bigg.metabolite":[
"4abz"
],
"biocyc":[
"META:P-AMINO-BENZOATE"
],
"chebi":[
"CHEBI:30753",
"CHEBI:20314",
"CHEBI:44778",
"CHEBI:11959",
"CHEBI:113372",
"CHEBI:20315",
"CHEBI:17836",
"CHEBI:1783"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/a5ad09dc-a75c-4ad4-8917-a62ebefdc941"
],
"hmdb":[
"HMDB01392"
],
"inchi_key":[
"ALYNCZNDIQEVRV-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00568"
],
"kegg.drug":[
"D02456"
],
"metanetx.chemical":[
"MNXM421"
],
"sabiork":[
"2099"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00443"
]
}
},
{
"id":"3nphb_c",
"name":"3-Nonaprenyl-4-hydroxybenzoate",
"compartment":"c",
"charge":-1,
"formula":"C52H77O3",
"notes":{
"original_bigg_ids":[
"3nphb_c"
]
},
"annotation":{
"bigg.metabolite":[
"3nphb"
],
"sbo":"SBO:0000247"
}
},
{
"id":"prbamp_c",
"name":"1-(5-Phosphoribosyl)-AMP",
"compartment":"c",
"charge":-4,
"formula":"C15H19N5O14P2",
"notes":{
"original_bigg_ids":[
"prbamp_c"
]
},
"annotation":{
"bigg.metabolite":[
"prbamp"
],
"biocyc":[
"META:PHOSPHORIBOSYL-AMP"
],
"chebi":[
"CHEBI:7354",
"CHEBI:11195",
"CHEBI:37522",
"CHEBI:59457",
"CHEBI:18374",
"CHEBI:8166",
"CHEBI:20628"
],
"hmdb":[
"HMDB12276"
],
"inchi_key":[
"RTQMRTSPTLIIHM-KEOHHSTQSA-J"
],
"kegg.compound":[
"C02741"
],
"metanetx.chemical":[
"MNXM1515"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01777"
]
}
},
{
"id":"ca2_c",
"name":"Calcium",
"compartment":"c",
"charge":2,
"formula":"Ca",
"notes":{
"original_bigg_ids":[
"ca2_c"
]
},
"annotation":{
"bigg.metabolite":[
"ca2"
],
"biocyc":[
"META:CA+2"
],
"chebi":[
"CHEBI:29108",
"CHEBI:48760",
"CHEBI:39123",
"CHEBI:22988",
"CHEBI:3308"
],
"hmdb":[
"HMDB00464"
],
"inchi_key":[
"BHPQYMZQTOCNFJ-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00076"
],
"metanetx.chemical":[
"MNXM128"
],
"reactome.compound":[
"111875",
"167012",
"139827",
"74016",
"74112",
"1606834",
"2855229"
],
"sabiork":[
"1289"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29674",
"cpd00063"
]
}
},
{
"id":"acg5sa_c",
"name":"N-Acetyl-L-glutamate 5-semialdehyde",
"compartment":"c",
"charge":-1,
"formula":"C7H10NO4",
"notes":{
"original_bigg_ids":[
"acg5sa_c"
]
},
"annotation":{
"bigg.metabolite":[
"acg5sa"
],
"biocyc":[
"META:CPD-469"
],
"chebi":[
"CHEBI:16319",
"CHEBI:11493",
"CHEBI:12577",
"CHEBI:7152",
"CHEBI:29123",
"CHEBI:12461",
"CHEBI:21551"
],
"hmdb":[
"HMDB06488"
],
"inchi_key":[
"BCPSFKBPHHBDAI-LURJTMIESA-M"
],
"kegg.compound":[
"C01250"
],
"metanetx.chemical":[
"MNXM1062"
],
"sabiork":[
"2267"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00918"
]
}
},
{
"id":"h2o_p",
"name":"H2O H2O",
"compartment":"p",
"charge":0,
"formula":"H2O",
"notes":{
"original_bigg_ids":[
"h2o_p"
]
},
"annotation":{
"bigg.metabolite":[
"h2o"
],
"biocyc":[
"META:CPD-15815",
"META:OXONIUM",
"META:HYDROXYL-GROUP",
"META:WATER",
"META:OH"
],
"chebi":[
"CHEBI:13352",
"CHEBI:30490",
"CHEBI:43228",
"CHEBI:33813",
"CHEBI:44292",
"CHEBI:44641",
"CHEBI:27313",
"CHEBI:42043",
"CHEBI:44819",
"CHEBI:29356",
"CHEBI:5594",
"CHEBI:10743",
"CHEBI:15377",
"CHEBI:42857",
"CHEBI:13365",
"CHEBI:29412",
"CHEBI:16234",
"CHEBI:13419",
"CHEBI:5585",
"CHEBI:44701"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/799908db-b8c9-4982-86cb-1f225e2ad08c",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/e7f34a8e-cded-4793-b6d5-792335b38636",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/969d0227-3069-4e44-9525-7ae7bad84170"
],
"hmdb":[
"HMDB02111",
"HMDB01039"
],
"inchi_key":[
"XLYOFNOQVPJJNP-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00001",
"C01328"
],
"kegg.drug":[
"D00001",
"D06322"
],
"metanetx.chemical":[
"MNXM2"
],
"reactome.compound":[
"113521",
"141343",
"2022884",
"5278291",
"29356",
"189422",
"5668574",
"5693747",
"109276",
"113519",
"1605715",
"8851517",
"113518",
"351603"
],
"sabiork":[
"40"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27222",
"cpd00001",
"cpd15275"
]
}
},
{
"id":"ala__D_c",
"name":"D-Alanine",
"compartment":"c",
"charge":0,
"formula":"C3H7NO2",
"notes":{
"original_bigg_ids":[
"ala__D_c"
]
},
"annotation":{
"bigg.metabolite":[
"ala__D"
],
"biocyc":[
"META:D-ALANINE"
],
"chebi":[
"CHEBI:12899",
"CHEBI:57416",
"CHEBI:41798",
"CHEBI:10840",
"CHEBI:20893",
"CHEBI:4087",
"CHEBI:32435",
"CHEBI:41848",
"CHEBI:41756",
"CHEBI:41877",
"CHEBI:15570",
"CHEBI:32436"
],
"hmdb":[
"HMDB01310"
],
"inchi_key":[
"QNAYBMKLOCPYGJ-UWTATZPHSA-N"
],
"kegg.compound":[
"C00133"
],
"metanetx.chemical":[
"MNXM156"
],
"sabiork":[
"1940"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00117"
]
}
},
{
"id":"aicar_c",
"name":"5-Amino-1-(5-Phospho-D-ribosyl)imidazole-4-carboxamide",
"compartment":"c",
"charge":-2,
"formula":"C9H13N4O8P",
"notes":{
"original_bigg_ids":[
"aicar_c"
]
},
"annotation":{
"bigg.metabolite":[
"aicar"
],
"biocyc":[
"META:AICAR"
],
"chebi":[
"CHEBI:573",
"CHEBI:12102",
"CHEBI:40739",
"CHEBI:58475",
"CHEBI:18406",
"CHEBI:18966"
],
"hmdb":[
"HMDB01517"
],
"inchi_key":[
"NOTGFIUVDGNKRI-UUOKFMHZSA-L"
],
"kegg.compound":[
"C04677"
],
"metanetx.chemical":[
"MNXM365"
],
"reactome.compound":[
"111409"
],
"sabiork":[
"1891"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02851"
]
}
},
{
"id":"glyclt_c",
"name":"Glycolate C2H3O3",
"compartment":"c",
"charge":-1,
"formula":"C2H3O3",
"notes":{
"original_bigg_ids":[
"glyclt_c"
]
},
"annotation":{
"bigg.metabolite":[
"glyclt"
],
"biocyc":[
"META:GLYCOLLATE"
],
"chebi":[
"CHEBI:24388",
"CHEBI:5475",
"CHEBI:17497",
"CHEBI:14348",
"CHEBI:24390",
"CHEBI:29805",
"CHEBI:42865"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/65f8bf08-1b83-49cd-8f44-8591a6b78f5f",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/fadcee01-99f5-4203-9a94-43ad453f2124",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/9a241561-612f-4e82-99c8-d4ce30c862bf",
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/8b8341da-ab0c-4974-87a5-7515166e2965"
],
"hmdb":[
"HMDB03035",
"HMDB00115"
],
"inchi_key":[
"AEMRFAOFKBGASW-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00160"
],
"metanetx.chemical":[
"MNXM222"
],
"reactome.compound":[
"389822"
],
"sabiork":[
"1953"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12347",
"cpd00139"
]
}
},
{
"id":"butACP_c",
"name":"Butyryl-ACP (n-C4:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C4H7OSR",
"notes":{
"original_bigg_ids":[
"butACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"butACP"
],
"metanetx.chemical":[
"MNXM90458"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pre8_c",
"name":"Precorrin 8",
"compartment":"c",
"charge":-7,
"formula":"C45H53N4O14",
"notes":{
"original_bigg_ids":[
"pre8_c"
]
},
"annotation":{
"bigg.metabolite":[
"pre8"
],
"biocyc":[
"META:CPD-686"
],
"chebi":[
"CHEBI:14877",
"CHEBI:8377",
"CHEBI:26227",
"CHEBI:28629",
"CHEBI:58581"
],
"inchi_key":[
"IGCZFSMEIXUSJY-FKUSVXTQSA-G"
],
"kegg.compound":[
"C06408"
],
"metanetx.chemical":[
"MNXM1589"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03835"
]
}
},
{
"id":"4ppcys_c",
"name":"N-((R)-4-Phosphopantothenoyl)-L-cysteine",
"compartment":"c",
"charge":-3,
"formula":"C12H20N2O9PS",
"notes":{
"original_bigg_ids":[
"4ppcys_c"
]
},
"annotation":{
"bigg.metabolite":[
"4ppcys"
],
"biocyc":[
"META:R-4-PHOSPHOPANTOTHENOYL-L-CYSTEINE"
],
"chebi":[
"CHEBI:15769",
"CHEBI:12438",
"CHEBI:10987",
"CHEBI:57507",
"CHEBI:59458",
"CHEBI:328",
"CHEBI:21461"
],
"hmdb":[
"HMDB01117"
],
"inchi_key":[
"XQYALQVLCNHCFT-CBAPKCEASA-K"
],
"kegg.compound":[
"C04352"
],
"metanetx.chemical":[
"MNXM483"
],
"reactome.compound":[
"196834"
],
"sabiork":[
"7255"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02666"
]
}
},
{
"id":"g6p_c",
"name":"D-Glucose 6-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O9P",
"notes":{
"original_bigg_ids":[
"g6p_c"
]
},
"annotation":{
"bigg.metabolite":[
"g6p"
],
"biocyc":[
"META:D-glucopyranose-6-phosphate"
],
"chebi":[
"CHEBI:61548",
"CHEBI:14314",
"CHEBI:4170"
],
"hmdb":[
"HMDB01549",
"HMDB01401",
"HMDB06793"
],
"inchi_key":[
"NBSCHQHZLSJFNQ-GASJEMHNSA-L"
],
"kegg.compound":[
"C00092"
],
"metanetx.chemical":[
"MNXM160"
],
"reactome.compound":[
"1629756"
],
"sabiork":[
"1404",
"1405"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00079",
"cpd26836"
]
}
},
{
"id":"glu5sa_c",
"name":"L-Glutamate 5-semialdehyde",
"compartment":"c",
"charge":0,
"formula":"C5H9NO3",
"notes":{
"original_bigg_ids":[
"glu5sa_c"
]
},
"annotation":{
"bigg.metabolite":[
"glu5sa"
],
"biocyc":[
"META:L-GLUTAMATE_GAMMA-SEMIALDEHYDE"
],
"chebi":[
"CHEBI:21302",
"CHEBI:58066",
"CHEBI:17232",
"CHEBI:13109",
"CHEBI:6225"
],
"hmdb":[
"HMDB02104"
],
"inchi_key":[
"KABXUUFDPUOJMW-BYPYZUCNSA-N"
],
"kegg.compound":[
"C01165"
],
"metanetx.chemical":[
"MNXM245"
],
"reactome.compound":[
"31339"
],
"sabiork":[
"2262"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00858"
]
}
},
{
"id":"3dhsk_c",
"name":"3-Dehydroshikimate",
"compartment":"c",
"charge":-1,
"formula":"C7H7O5",
"notes":{
"original_bigg_ids":[
"3dhsk_c"
]
},
"annotation":{
"bigg.metabolite":[
"3dhsk"
],
"biocyc":[
"META:3-DEHYDRO-SHIKIMATE"
],
"chebi":[
"CHEBI:1488",
"CHEBI:2052",
"CHEBI:12123",
"CHEBI:30918",
"CHEBI:17841",
"CHEBI:20566",
"CHEBI:19998",
"CHEBI:19999",
"CHEBI:11782",
"CHEBI:16630",
"CHEBI:42005"
],
"inchi_key":[
"SLWWJZMPHJJOPH-PHDIDXHHSA-M"
],
"kegg.compound":[
"C02637"
],
"metanetx.chemical":[
"MNXM611"
],
"reactome.compound":[
"964941"
],
"sabiork":[
"6290",
"27313"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01716"
]
}
},
{
"id":"udpgal_c",
"name":"UDPgalactose",
"compartment":"c",
"charge":-2,
"formula":"C15H22N2O17P2",
"notes":{
"original_bigg_ids":[
"udpgal_c"
]
},
"annotation":{
"bigg.metabolite":[
"udpgal"
],
"biocyc":[
"META:CPD-14553"
],
"chebi":[
"CHEBI:22100",
"CHEBI:9811",
"CHEBI:18307",
"CHEBI:42751",
"CHEBI:13495",
"CHEBI:66914",
"CHEBI:67119",
"CHEBI:13487",
"CHEBI:58439"
],
"hmdb":[
"HMDB62573",
"HMDB00302"
],
"inchi_key":[
"HSCJRCZFDFQWRP-ABVWGUQPSA-L"
],
"kegg.compound":[
"C00052"
],
"kegg.glycan":[
"G10609"
],
"metanetx.chemical":[
"MNXM89795"
],
"reactome.compound":[
"735682",
"29452"
],
"sabiork":[
"1283",
"3919"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00043",
"cpd30770"
]
}
},
{
"id":"dhpmp_c",
"name":"Dihydroneopterin monophosphate",
"compartment":"c",
"charge":-2,
"formula":"C9H12N5O7P",
"notes":{
"original_bigg_ids":[
"dhpmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhpmp"
],
"biocyc":[
"META:DIHYDRONEOPTERIN-P"
],
"chebi":[
"CHEBI:48954",
"CHEBI:58762",
"CHEBI:4577",
"CHEBI:23756"
],
"hmdb":[
"HMDB06824"
],
"inchi_key":[
"PLSQMGZYOGSOCE-XINAWCOVSA-L"
],
"kegg.compound":[
"C05925"
],
"metanetx.chemical":[
"MNXM1645"
],
"sabiork":[
"8272"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03521",
"cpd29676"
]
}
},
{
"id":"f6p_c",
"name":"D-Fructose 6-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O9P",
"notes":{
"original_bigg_ids":[
"f6p_c"
]
},
"annotation":{
"bigg.metabolite":[
"f6p"
],
"biocyc":[
"META:FRUCTOSE-6P"
],
"chebi":[
"CHEBI:16084",
"CHEBI:12352",
"CHEBI:57634",
"CHEBI:22768",
"CHEBI:10375",
"CHEBI:42378"
],
"hmdb":[
"HMDB03971"
],
"inchi_key":[
"BGWGXPAPYGQALX-ARQDHWQXSA-L"
],
"kegg.compound":[
"C05345"
],
"metanetx.chemical":[
"MNXM89621"
],
"sabiork":[
"25"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19035"
]
}
},
{
"id":"zcarote_c",
"name":"Zeta-Carotene",
"compartment":"c",
"charge":0,
"formula":"C40H60",
"notes":{
"original_bigg_ids":[
"zcarote_c"
]
},
"annotation":{
"bigg.metabolite":[
"zcarote"
],
"biocyc":[
"META:CPD1F-98"
],
"chebi":[
"CHEBI:10737",
"CHEBI:27362",
"CHEBI:28068"
],
"inchi_key":[
"BIWLELKAFXRPDE-WTXAYMOSSA-N"
],
"kegg.compound":[
"C05430"
],
"lipidmaps":[
"LMPR01070256"
],
"metanetx.chemical":[
"MNXM1039"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03215",
"cpd29834"
]
}
},
{
"id":"glyc__R_c",
"name":"(R)-Glycerate",
"compartment":"c",
"charge":-1,
"formula":"C3H5O4",
"notes":{
"original_bigg_ids":[
"glyc__R_c"
]
},
"annotation":{
"bigg.metabolite":[
"glyc__R"
],
"biocyc":[
"META:GLYCERATE"
],
"chebi":[
"CHEBI:21030",
"CHEBI:24348",
"CHEBI:10999",
"CHEBI:21027",
"CHEBI:41990",
"CHEBI:33846",
"CHEBI:33508",
"CHEBI:4187",
"CHEBI:24349",
"CHEBI:12985",
"CHEBI:33871",
"CHEBI:16659",
"CHEBI:32398"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/6be053c1-d456-4f14-a62a-26231b127f45",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/42fb796b-d2e8-4cf9-ba19-d4d843d29da0"
],
"hmdb":[
"HMDB31818",
"HMDB00139"
],
"inchi_key":[
"RBNPOMFGQQGHHO-UWTATZPHSA-M"
],
"kegg.compound":[
"C00258"
],
"metanetx.chemical":[
"MNXM189"
],
"reactome.compound":[
"6799497"
],
"sabiork":[
"3917",
"1999"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00223"
]
}
},
{
"id":"ac_c",
"name":"Acetate",
"compartment":"c",
"charge":-1,
"formula":"C2H3O2",
"notes":{
"original_bigg_ids":[
"ac_c"
]
},
"annotation":{
"bigg.metabolite":[
"ac"
],
"biocyc":[
"META:ACET"
],
"chebi":[
"CHEBI:13704",
"CHEBI:22165",
"CHEBI:22169",
"CHEBI:40480",
"CHEBI:15366",
"CHEBI:2387",
"CHEBI:30089",
"CHEBI:40486"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/9e26dcbe-4db9-46a0-8614-9f03545032d2",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/5e4989fc-13d3-45d4-ad57-3be380a9d3c0",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/a8f0be58-24e8-441b-8d81-a516a0ead4b3",
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/d45256fe-61fa-4f5b-bb16-91a3d615e3d8",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b545cabc-8c9e-4b20-8848-efa015b481ea",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/3e2d750f-df31-4445-9255-163c627e9b4a"
],
"hmdb":[
"HMDB00042"
],
"inchi_key":[
"QTBSBXVTEAMEQO-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00033"
],
"kegg.drug":[
"D00010"
],
"lipidmaps":[
"LMFA01010002"
],
"metanetx.chemical":[
"MNXM26"
],
"reactome.compound":[
"1524044",
"390305",
"113539",
"2022890",
"29416"
],
"sabiork":[
"1278"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00029"
],
"slm":[
"000000449"
]
}
},
{
"id":"lac__D_c",
"name":"D-Lactate",
"compartment":"c",
"charge":-1,
"formula":"C3H5O3",
"notes":{
"original_bigg_ids":[
"lac__D_c"
]
},
"annotation":{
"bigg.metabolite":[
"lac__D"
],
"biocyc":[
"META:D-LACTATE"
],
"chebi":[
"CHEBI:16004",
"CHEBI:341",
"CHEBI:18684",
"CHEBI:43701",
"CHEBI:11001",
"CHEBI:42111",
"CHEBI:42105"
],
"hmdb":[
"HMDB01311",
"HMDB00171"
],
"inchi_key":[
"JVTAAEKCZFNVCJ-UWTATZPHSA-M"
],
"kegg.compound":[
"C00256"
],
"metanetx.chemical":[
"MNXM285"
],
"sabiork":[
"1997",
"2284"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00221"
]
}
},
{
"id":"dad_5_c",
"name":"5'-Deoxyadenosine",
"compartment":"c",
"charge":0,
"formula":"C10H13N5O3",
"notes":{
"original_bigg_ids":[
"dad_5_c"
]
},
"annotation":{
"bigg.metabolite":[
"dad_5"
],
"biocyc":[
"META:CH33ADO"
],
"chebi":[
"CHEBI:17319",
"CHEBI:12061",
"CHEBI:1960",
"CHEBI:40099",
"CHEBI:20493"
],
"hmdb":[
"HMDB01983"
],
"inchi_key":[
"XGYIMTFOTBMPFP-KQYNXXCUSA-N"
],
"kegg.compound":[
"C05198"
],
"metanetx.chemical":[
"MNXM316"
],
"reactome.compound":[
"1130791",
"947703"
],
"sabiork":[
"2720"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03091"
]
}
},
{
"id":"his__L_c",
"name":"L-Histidine",
"compartment":"c",
"charge":0,
"formula":"C6H9N3O2",
"notes":{
"original_bigg_ids":[
"his__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"his__L"
],
"biocyc":[
"META:HIS"
],
"chebi":[
"CHEBI:43239",
"CHEBI:32529",
"CHEBI:43048",
"CHEBI:5733",
"CHEBI:32530",
"CHEBI:27570",
"CHEBI:32531",
"CHEBI:43118",
"CHEBI:32513",
"CHEBI:15971",
"CHEBI:43190",
"CHEBI:21324",
"CHEBI:32512",
"CHEBI:32511",
"CHEBI:13117",
"CHEBI:43114",
"CHEBI:32510",
"CHEBI:6240",
"CHEBI:32532",
"CHEBI:57595",
"CHEBI:24598"
],
"hmdb":[
"HMDB00177",
"HMDB03412"
],
"inchi_key":[
"HNDVDQJCIGZPNO-YFKPBYRVSA-N"
],
"kegg.compound":[
"C00768",
"C00135"
],
"kegg.drug":[
"D00032"
],
"metanetx.chemical":[
"MNXM134"
],
"reactome.compound":[
"379695",
"29612"
],
"sabiork":[
"2151",
"81"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00119",
"cpd00572"
]
}
},
{
"id":"pre3b_c",
"name":"Precorrin 3B",
"compartment":"c",
"charge":-7,
"formula":"C43H43N4O17",
"notes":{
"original_bigg_ids":[
"pre3b_c"
]
},
"annotation":{
"bigg.metabolite":[
"pre3b"
],
"biocyc":[
"META:CPD-643"
],
"chebi":[
"CHEBI:77870",
"CHEBI:58522",
"CHEBI:27711",
"CHEBI:8372",
"CHEBI:14872",
"CHEBI:26222"
],
"inchi_key":[
"KJHZYYJBHKAUHS-NXWQJPGNSA-H"
],
"kegg.compound":[
"C06406"
],
"metanetx.chemical":[
"MNXM1291"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03833"
]
}
},
{
"id":"2dda7p_c",
"name":"2-Dehydro-3-deoxy-D-arabino-heptonate 7-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C7H10O10P",
"notes":{
"original_bigg_ids":[
"2dda7p_c"
]
},
"annotation":{
"bigg.metabolite":[
"2dda7p"
],
"biocyc":[
"META:3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P"
],
"chebi":[
"CHEBI:1053",
"CHEBI:18150",
"CHEBI:11544",
"CHEBI:11785",
"CHEBI:19523",
"CHEBI:58394",
"CHEBI:20003",
"CHEBI:11786",
"CHEBI:29477"
],
"inchi_key":[
"PJWIPEXIFFQAQZ-PUFIMZNGSA-K"
],
"kegg.compound":[
"C04691"
],
"metanetx.chemical":[
"MNXM1219"
],
"reactome.compound":[
"964909"
],
"sabiork":[
"1828"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02857"
]
}
},
{
"id":"mthgxl_c",
"name":"Methylglyoxal",
"compartment":"c",
"charge":0,
"formula":"C3H4O2",
"notes":{
"original_bigg_ids":[
"mthgxl_c"
]
},
"annotation":{
"bigg.metabolite":[
"mthgxl"
],
"biocyc":[
"META:METHYL-GLYOXAL"
],
"chebi":[
"CHEBI:14599",
"CHEBI:25303",
"CHEBI:11643",
"CHEBI:6875",
"CHEBI:17158"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/87b7fac4-f224-43ab-81f4-b95330450174"
],
"hmdb":[
"HMDB01167"
],
"inchi_key":[
"AIJULSRZWUXGPQ-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00546"
],
"metanetx.chemical":[
"MNXM310"
],
"reactome.compound":[
"5694074"
],
"sabiork":[
"2088"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00428"
]
}
},
{
"id":"agdpcbi_c",
"name":"Adenosine-GDP-cobinamide",
"compartment":"c",
"charge":-1,
"formula":"C68CoH95N21O21P2",
"notes":{
"original_bigg_ids":[
"agdpcbi_c"
]
},
"annotation":{
"bigg.metabolite":[
"agdpcbi"
],
"biocyc":[
"META:ADENOSYLCOBINAMIDE-GDP"
],
"chebi":[
"CHEBI:2479",
"CHEBI:60487"
],
"hmdb":[
"HMDB12185"
],
"inchi_key":[
"IQTYKHRKNGVJEO-RRMAJTJESA-K"
],
"kegg.compound":[
"C06510"
],
"metanetx.chemical":[
"MNXM1105"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03920"
]
}
},
{
"id":"acglu_c",
"name":"N-Acetyl-L-glutamate",
"compartment":"c",
"charge":-2,
"formula":"C7H9NO5",
"notes":{
"original_bigg_ids":[
"acglu_c"
]
},
"annotation":{
"bigg.metabolite":[
"acglu"
],
"biocyc":[
"META:ACETYL-GLU"
],
"chebi":[
"CHEBI:7150",
"CHEBI:17533",
"CHEBI:44337",
"CHEBI:44335",
"CHEBI:21549",
"CHEBI:87274",
"CHEBI:64040",
"CHEBI:12575",
"CHEBI:21552"
],
"inchi_key":[
"RFMMMVDNIPUKGG-YFKPBYRVSA-L"
],
"kegg.compound":[
"C00624"
],
"metanetx.chemical":[
"MNXM730"
],
"reactome.compound":[
"30471"
],
"sabiork":[
"2120"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00477"
]
}
},
{
"id":"s17bp_c",
"name":"Sedoheptulose 1,7-bisphosphate",
"compartment":"c",
"charge":-4,
"formula":"C7H12O13P2",
"notes":{
"original_bigg_ids":[
"s17bp_c"
]
},
"annotation":{
"bigg.metabolite":[
"s17bp"
],
"biocyc":[
"META:D-SEDOHEPTULOSE-1-7-P2"
],
"chebi":[
"CHEBI:17969",
"CHEBI:26620",
"CHEBI:15072",
"CHEBI:58335",
"CHEBI:9081"
],
"hmdb":[
"HMDB60274"
],
"inchi_key":[
"OKHXOUGRECCASI-SHUUEZRQSA-J"
],
"kegg.compound":[
"C00447"
],
"metanetx.chemical":[
"MNXM1294"
],
"sabiork":[
"1339"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00349"
]
}
},
{
"id":"dctp_c",
"name":"DCTP C9H12N3O13P3",
"compartment":"c",
"charge":-4,
"formula":"C9H12N3O13P3",
"notes":{
"original_bigg_ids":[
"dctp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dctp"
],
"biocyc":[
"META:DCTP"
],
"chebi":[
"CHEBI:19243",
"CHEBI:10494",
"CHEBI:61481",
"CHEBI:16311",
"CHEBI:14072",
"CHEBI:57724"
],
"hmdb":[
"HMDB00998"
],
"inchi_key":[
"RGWHQCVHVJXOKC-SHYZEUOFSA-J"
],
"kegg.compound":[
"C00458"
],
"metanetx.chemical":[
"MNXM360"
],
"sabiork":[
"1678"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00356"
]
}
},
{
"id":"3mop_c",
"name":"(S)-3-Methyl-2-oxopentanoate",
"compartment":"c",
"charge":-1,
"formula":"C6H9O3",
"notes":{
"original_bigg_ids":[
"3mop_c"
]
},
"annotation":{
"bigg.metabolite":[
"3mop"
],
"biocyc":[
"META:2-KETO-3-METHYL-VALERATE"
],
"chebi":[
"CHEBI:18568",
"CHEBI:401",
"CHEBI:213",
"CHEBI:18567",
"CHEBI:35146",
"CHEBI:18755",
"CHEBI:11049",
"CHEBI:10888",
"CHEBI:15614"
],
"inchi_key":[
"JVQYSWDUAOAHFM-BYPYZUCNSA-M"
],
"kegg.compound":[
"C00671"
],
"lipidmaps":[
"LMFA01020275"
],
"metanetx.chemical":[
"MNXM439"
],
"sabiork":[
"5174"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00508"
]
}
},
{
"id":"imp_c",
"name":"IMP C10H11N4O8P",
"compartment":"c",
"charge":-2,
"formula":"C10H11N4O8P",
"notes":{
"original_bigg_ids":[
"imp_c"
]
},
"annotation":{
"bigg.metabolite":[
"imp"
],
"biocyc":[
"META:IMP"
],
"chebi":[
"CHEBI:43524",
"CHEBI:13373",
"CHEBI:43528",
"CHEBI:19271",
"CHEBI:58053",
"CHEBI:12063",
"CHEBI:43611",
"CHEBI:5849",
"CHEBI:43563",
"CHEBI:12057",
"CHEBI:14457",
"CHEBI:43475",
"CHEBI:43418",
"CHEBI:17202",
"CHEBI:47501",
"CHEBI:13372"
],
"hmdb":[
"HMDB00175"
],
"inchi_key":[
"GRSZFWQUAKGDAV-KQYNXXCUSA-L"
],
"kegg.compound":[
"C00130"
],
"metanetx.chemical":[
"MNXM125"
],
"reactome.compound":[
"2509792",
"29602"
],
"sabiork":[
"1306"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00114"
]
}
},
{
"id":"5drib_c",
"name":"5'-deoxyribose",
"compartment":"c",
"charge":0,
"formula":"C5H10O4",
"notes":{
"original_bigg_ids":[
"5drib_c"
]
},
"annotation":{
"bigg.metabolite":[
"5drib"
],
"biocyc":[
"META:CPD0-2167"
],
"chebi":[
"CHEBI:62012"
],
"inchi_key":[
"WDRISBUVHBMJEF-MROZADKFSA-N"
],
"metanetx.chemical":[
"MNXM4391"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd17002",
"cpd15380"
]
}
},
{
"id":"thf_c",
"name":"5,6,7,8-Tetrahydrofolate",
"compartment":"c",
"charge":-2,
"formula":"C19H21N7O6",
"notes":{
"original_bigg_ids":[
"thf_c"
]
},
"annotation":{
"bigg.metabolite":[
"thf"
],
"biocyc":[
"META:THF"
],
"chebi":[
"CHEBI:57453",
"CHEBI:46069",
"CHEBI:20506",
"CHEBI:12075",
"CHEBI:9482",
"CHEBI:15635",
"CHEBI:18606",
"CHEBI:10931",
"CHEBI:15220",
"CHEBI:68437"
],
"inchi_key":[
"MSTNYGQPCMXVAQ-RYUDHWBXSA-L"
],
"kegg.compound":[
"C00101"
],
"metanetx.chemical":[
"MNXM79"
],
"reactome.compound":[
"111355",
"200671"
],
"sabiork":[
"1297"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29254"
]
}
},
{
"id":"nad_c",
"name":"Nicotinamide adenine dinucleotide",
"compartment":"c",
"charge":-1,
"formula":"C21H26N7O14P2",
"notes":{
"original_bigg_ids":[
"nad_c"
]
},
"annotation":{
"bigg.metabolite":[
"nad"
],
"biocyc":[
"META:NAD"
],
"chebi":[
"CHEBI:7422",
"CHEBI:44215",
"CHEBI:13394",
"CHEBI:21901",
"CHEBI:57540",
"CHEBI:15846",
"CHEBI:44281",
"CHEBI:44214",
"CHEBI:13393",
"CHEBI:29867"
],
"hmdb":[
"HMDB00902"
],
"inchi_key":[
"BAWFJGJZGIEFAR-NNYOXOHSSA-M"
],
"kegg.compound":[
"C00003"
],
"kegg.drug":[
"D00002"
],
"metanetx.chemical":[
"MNXM8"
],
"reactome.compound":[
"352330",
"192307",
"194653",
"113526",
"29360"
],
"sabiork":[
"37"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00003"
]
}
},
{
"id":"25aics_c",
"name":"(S)-2-[5-Amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido]succinate",
"compartment":"c",
"charge":-4,
"formula":"C13H15N4O12P",
"notes":{
"original_bigg_ids":[
"25aics_c"
]
},
"annotation":{
"bigg.metabolite":[
"25aics"
],
"biocyc":[
"META:P-RIBOSYL-4-SUCCCARB-AMINOIMIDAZOLE"
],
"chebi":[
"CHEBI:78110",
"CHEBI:18319",
"CHEBI:58443",
"CHEBI:11028",
"CHEBI:18965",
"CHEBI:572"
],
"hmdb":[
"HMDB00797",
"HMDB06274"
],
"inchi_key":[
"NAQGHJTUZRHGAC-ZZZDFHIKSA-J"
],
"kegg.compound":[
"C04823"
],
"metanetx.chemical":[
"MNXM607"
],
"reactome.compound":[
"111399"
],
"sabiork":[
"1893"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19032"
]
}
},
{
"id":"dcamp_c",
"name":"N6-(1,2-Dicarboxyethyl)-AMP",
"compartment":"c",
"charge":-4,
"formula":"C14H14N5O11P",
"notes":{
"original_bigg_ids":[
"dcamp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dcamp"
],
"biocyc":[
"META:ADENYLOSUCC"
],
"chebi":[
"CHEBI:12657",
"CHEBI:39869",
"CHEBI:57567",
"CHEBI:21857",
"CHEBI:7405",
"CHEBI:12656",
"CHEBI:22262",
"CHEBI:15919"
],
"hmdb":[
"HMDB01332",
"HMDB11633",
"HMDB59653",
"HMDB00536"
],
"inchi_key":[
"OFBHPPMPBOJXRT-DPXQIYNJSA-J"
],
"kegg.compound":[
"C03794"
],
"metanetx.chemical":[
"MNXM565"
],
"reactome.compound":[
"35141"
],
"sabiork":[
"1886"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02375"
]
}
},
{
"id":"ni2_c",
"name":"Nickel",
"compartment":"c",
"charge":2,
"formula":"Ni",
"notes":{
"original_bigg_ids":[
"ni2_c"
]
},
"annotation":{
"bigg.metabolite":[
"ni2"
],
"biocyc":[
"META:NI+2"
],
"chebi":[
"CHEBI:25517",
"CHEBI:49785",
"CHEBI:49786"
],
"hmdb":[
"HMDB02457"
],
"inchi_key":[
"VEQPNABPJHWNSG-UHFFFAOYSA-N"
],
"kegg.compound":[
"C19609"
],
"metanetx.chemical":[
"MNXM3673"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd20862"
]
}
},
{
"id":"bm_carbs_c",
"name":"Biomass metabolite: glycogen and carbohydrates",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_carbs_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_carbs"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dtdp4d6dg_c",
"name":"DTDP-4-dehydro-6-deoxy-D-glucose",
"compartment":"c",
"charge":-2,
"formula":"C16H22N2O15P2",
"notes":{
"original_bigg_ids":[
"dtdp4d6dg_c"
]
},
"annotation":{
"bigg.metabolite":[
"dtdp4d6dg"
],
"biocyc":[
"META:DTDP-DEOH-DEOXY-GLUCOSE"
],
"chebi":[
"CHEBI:14081",
"CHEBI:62829",
"CHEBI:10510",
"CHEBI:57649",
"CHEBI:16128",
"CHEBI:23542"
],
"hmdb":[
"HMDB60081"
],
"inchi_key":[
"PSXWNITXWWECNY-UCBTUHGZSA-L"
],
"kegg.compound":[
"C11907"
],
"metanetx.chemical":[
"MNXM451"
],
"sabiork":[
"1563"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00521"
]
}
},
{
"id":"2ahethmpp_c",
"name":"2-(alpha-Hydroxyethyl)thiamine diphosphate",
"compartment":"c",
"charge":-2,
"formula":"C14H20N4O8P2S",
"notes":{
"original_bigg_ids":[
"2ahethmpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"2ahethmpp"
],
"biocyc":[
"META:2-ALPHA-HYDROXYETHYL-THPP"
],
"chebi":[
"CHEBI:978",
"CHEBI:58939"
],
"hmdb":[
"HMDB03904"
],
"inchi_key":[
"RRUVJGASJONMDY-UHFFFAOYSA-L"
],
"kegg.compound":[
"C05125"
],
"metanetx.chemical":[
"MNXM1705"
],
"sabiork":[
"1839"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03049"
]
}
},
{
"id":"malcoa_c",
"name":"Malonyl CoA C24H33N7O19P3S",
"compartment":"c",
"charge":-5,
"formula":"C24H33N7O19P3S",
"notes":{
"original_bigg_ids":[
"malcoa_c"
]
},
"annotation":{
"bigg.metabolite":[
"malcoa"
],
"biocyc":[
"META:MALONYL-COA"
],
"chebi":[
"CHEBI:25135",
"CHEBI:43979",
"CHEBI:57384",
"CHEBI:14565",
"CHEBI:15531",
"CHEBI:6661"
],
"hmdb":[
"HMDB01175"
],
"inchi_key":[
"LTYOQGRJFJAKNA-DVVLENMVSA-I"
],
"kegg.compound":[
"C00083"
],
"lipidmaps":[
"LMFA07050345",
"LMFA07050031"
],
"metanetx.chemical":[
"MNXM40"
],
"reactome.compound":[
"977323",
"2046066",
"29508"
],
"sabiork":[
"1930"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00070",
"cpd12270"
]
}
},
{
"id":"imacp_c",
"name":"3-(Imidazol-4-yl)-2-oxopropyl phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H7N2O5P",
"notes":{
"original_bigg_ids":[
"imacp_c"
]
},
"annotation":{
"bigg.metabolite":[
"imacp"
],
"biocyc":[
"META:IMIDAZOLE-ACETOL-P"
],
"chebi":[
"CHEBI:57766",
"CHEBI:1437",
"CHEBI:16426",
"CHEBI:19941",
"CHEBI:11736"
],
"hmdb":[
"HMDB12236"
],
"inchi_key":[
"YCFFMSOLUMRAMD-UHFFFAOYSA-L"
],
"kegg.compound":[
"C01267"
],
"metanetx.chemical":[
"MNXM1456"
],
"sabiork":[
"5486"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00930"
]
}
},
{
"id":"fum_c",
"name":"Fumarate",
"compartment":"c",
"charge":-2,
"formula":"C4H2O4",
"notes":{
"original_bigg_ids":[
"fum_c"
]
},
"annotation":{
"bigg.metabolite":[
"fum"
],
"biocyc":[
"META:FUM"
],
"chebi":[
"CHEBI:36180",
"CHEBI:37155",
"CHEBI:42511",
"CHEBI:5190",
"CHEBI:18012",
"CHEBI:42743",
"CHEBI:22956",
"CHEBI:22957",
"CHEBI:24124",
"CHEBI:14284",
"CHEBI:37154",
"CHEBI:29806",
"CHEBI:22958",
"CHEBI:24122"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/709035ec-4868-4de8-9095-06428f6be14b"
],
"hmdb":[
"HMDB00134"
],
"inchi_key":[
"VZCYOOQTPOCHFL-OWOJBTEDSA-L"
],
"kegg.compound":[
"C00122"
],
"kegg.drug":[
"D02308"
],
"metanetx.chemical":[
"MNXM93"
],
"reactome.compound":[
"113588",
"29586"
],
"sabiork":[
"1910"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00106"
]
}
},
{
"id":"dmlz_c",
"name":"6,7-Dimethyl-8-(1-D-ribityl)lumazine",
"compartment":"c",
"charge":0,
"formula":"C13H18N4O6",
"notes":{
"original_bigg_ids":[
"dmlz_c"
]
},
"annotation":{
"bigg.metabolite":[
"dmlz"
],
"biocyc":[
"META:DIMETHYL-D-RIBITYL-LUMAZINE"
],
"chebi":[
"CHEBI:20682",
"CHEBI:58201",
"CHEBI:17601",
"CHEBI:2154",
"CHEBI:12185"
],
"hmdb":[
"HMDB03826"
],
"inchi_key":[
"SXDXRJZUAJBNFL-XKSSXDPKSA-M"
],
"kegg.compound":[
"C04332"
],
"metanetx.chemical":[
"MNXM1313"
],
"sabiork":[
"7240"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02656"
]
}
},
{
"id":"bm_cw_c",
"name":"Cell wall component of biomass",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_cw_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_cw"
],
"sbo":"SBO:0000247"
}
},
{
"id":"e4hglu_c",
"name":"L erythro 4 Hydroxyglutamate C5H8NO5",
"compartment":"c",
"charge":-1,
"formula":"C5H8NO5",
"notes":{
"original_bigg_ids":[
"e4hglu_c"
]
},
"annotation":{
"bigg.metabolite":[
"e4hglu"
],
"biocyc":[
"META:L-ERYTHRO-4-HYDROXY-GLUTAMATE"
],
"chebi":[
"CHEBI:21285",
"CHEBI:6331"
],
"hmdb":[
"HMDB62752"
],
"inchi_key":[
"HBDWQSHEVMSFGY-STHAYSLISA-M"
],
"kegg.compound":[
"C05947"
],
"metanetx.chemical":[
"MNXM923"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19042"
]
}
},
{
"id":"g3p_c",
"name":"Glyceraldehyde 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C3H5O6P",
"notes":{
"original_bigg_ids":[
"g3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"g3p"
],
"biocyc":[
"META:GAP"
],
"chebi":[
"CHEBI:5446",
"CHEBI:14333",
"CHEBI:12984",
"CHEBI:181",
"CHEBI:17138",
"CHEBI:21026",
"CHEBI:12983",
"CHEBI:18324",
"CHEBI:58027",
"CHEBI:59776",
"CHEBI:29052"
],
"hmdb":[
"HMDB01112"
],
"inchi_key":[
"LXJXRIRHZLFYRP-VKHMYHEASA-L"
],
"kegg.compound":[
"C00661",
"C00118"
],
"metanetx.chemical":[
"MNXM74"
],
"reactome.compound":[
"29578"
],
"sabiork":[
"27",
"1687"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00102",
"cpd19005"
]
}
},
{
"id":"dgtp_c",
"name":"DGTP C10H12N5O13P3",
"compartment":"c",
"charge":-4,
"formula":"C10H12N5O13P3",
"notes":{
"original_bigg_ids":[
"dgtp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dgtp"
],
"biocyc":[
"META:DGTP"
],
"chebi":[
"CHEBI:16497",
"CHEBI:57794",
"CHEBI:61429",
"CHEBI:10497",
"CHEBI:19247",
"CHEBI:14076"
],
"hmdb":[
"HMDB01440"
],
"inchi_key":[
"HAAZLUGHYHWQIW-KVQBGUIXSA-J"
],
"kegg.compound":[
"C00286"
],
"metanetx.chemical":[
"MNXM344"
],
"sabiork":[
"1675"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00241"
]
}
},
{
"id":"ACP_c",
"name":"Acyl carrier protein",
"compartment":"c",
"charge":-1,
"formula":"HSR",
"notes":{
"original_bigg_ids":[
"ACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"ACP"
],
"biocyc":[
"META:ACP"
],
"chebi":[
"CHEBI:14405",
"CHEBI:18359",
"CHEBI:2458"
],
"kegg.compound":[
"C00229"
],
"metanetx.chemical":[
"MNXM925"
],
"sabiork":[
"2186"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11493"
]
}
},
{
"id":"dadp_c",
"name":"DADP C10H12N5O9P2",
"compartment":"c",
"charge":-3,
"formula":"C10H12N5O9P2",
"notes":{
"original_bigg_ids":[
"dadp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dadp"
],
"biocyc":[
"META:DADP"
],
"chebi":[
"CHEBI:10489",
"CHEBI:16174",
"CHEBI:57667",
"CHEBI:41890",
"CHEBI:19235",
"CHEBI:14067"
],
"hmdb":[
"HMDB01508"
],
"inchi_key":[
"DAEAPNUQQAICNR-RRKCRQDMSA-K"
],
"kegg.compound":[
"C00206"
],
"metanetx.chemical":[
"MNXM374"
],
"reactome.compound":[
"500087"
],
"sabiork":[
"1314"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00177"
]
}
},
{
"id":"mlthf_c",
"name":"5,10-Methylenetetrahydrofolate",
"compartment":"c",
"charge":-2,
"formula":"C20H21N7O6",
"notes":{
"original_bigg_ids":[
"mlthf_c"
]
},
"annotation":{
"bigg.metabolite":[
"mlthf"
],
"biocyc":[
"META:METHYLENE-THF"
],
"chebi":[
"CHEBI:10925",
"CHEBI:15636",
"CHEBI:1989",
"CHEBI:18602"
],
"inchi_key":[
"QYNUQALWYRSVHF-OLZOCXBDSA-L"
],
"kegg.compound":[
"C00143"
],
"metanetx.chemical":[
"MNXM183"
],
"sbo":"SBO:0000247"
}
},
{
"id":"cys__L_c",
"name":"L-Cysteine",
"compartment":"c",
"charge":0,
"formula":"C3H7NO2S",
"notes":{
"original_bigg_ids":[
"cys__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"cys__L"
],
"biocyc":[
"META:CYS"
],
"chebi":[
"CHEBI:32457",
"CHEBI:15356",
"CHEBI:4050",
"CHEBI:32456",
"CHEBI:21261",
"CHEBI:41811",
"CHEBI:14061",
"CHEBI:32443",
"CHEBI:32458",
"CHEBI:32442",
"CHEBI:13095",
"CHEBI:41768",
"CHEBI:23508",
"CHEBI:32445",
"CHEBI:35235",
"CHEBI:17561",
"CHEBI:41700",
"CHEBI:6207",
"CHEBI:41781",
"CHEBI:35237",
"CHEBI:41227"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/1271bedc-d0c8-4aa1-83dc-571304dd14a8",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/02361658-c991-436f-ba62-fafbccfdae5e"
],
"hmdb":[
"HMDB00574"
],
"inchi_key":[
"XUJNEKJLAYXESH-REOHCLBHSA-N"
],
"kegg.compound":[
"C00736",
"C00097"
],
"kegg.drug":[
"D00026"
],
"metanetx.chemical":[
"MNXM55"
],
"reactome.compound":[
"352016",
"379721",
"111707",
"5668576"
],
"sabiork":[
"2142",
"78"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00084",
"cpd00547"
]
}
},
{
"id":"o2_p",
"name":"O2 O2",
"compartment":"p",
"charge":0,
"formula":"O2",
"notes":{
"original_bigg_ids":[
"o2_p"
]
},
"annotation":{
"bigg.metabolite":[
"o2"
],
"biocyc":[
"META:OXYGEN-MOLECULE"
],
"chebi":[
"CHEBI:7860",
"CHEBI:26689",
"CHEBI:29097",
"CHEBI:15379",
"CHEBI:13416",
"CHEBI:27140",
"CHEBI:29793",
"CHEBI:30491",
"CHEBI:44742",
"CHEBI:23833",
"CHEBI:25366",
"CHEBI:10745"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/d5d12248-82d3-4cf3-b7d0-2e3d096768b4"
],
"hmdb":[
"HMDB01377"
],
"inchi_key":[
"MYMOFIZGZYHOMD-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00007"
],
"kegg.drug":[
"D00003"
],
"metanetx.chemical":[
"MNXM4"
],
"reactome.compound":[
"113534",
"113535",
"113685",
"5668566",
"189461",
"113533",
"1131511",
"352327",
"351593",
"29368",
"1236709"
],
"sabiork":[
"1264"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00007"
]
}
},
{
"id":"bm_rna_c",
"name":"RNA component of biomass",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_rna_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_rna"
],
"sbo":"SBO:0000247"
}
},
{
"id":"hisp_c",
"name":"L-Histidinol phosphate",
"compartment":"c",
"charge":-1,
"formula":"C6H11N3O4P",
"notes":{
"original_bigg_ids":[
"hisp_c"
]
},
"annotation":{
"bigg.metabolite":[
"hisp"
],
"biocyc":[
"META:L-HISTIDINOL-P"
],
"chebi":[
"CHEBI:16996",
"CHEBI:43319",
"CHEBI:57980",
"CHEBI:6242",
"CHEBI:21327",
"CHEBI:13119"
],
"inchi_key":[
"CWNDERHTHMWBSI-YFKPBYRVSA-M"
],
"kegg.compound":[
"C01100"
],
"metanetx.chemical":[
"MNXM1482"
],
"sabiork":[
"1699"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00807"
]
}
},
{
"id":"h_p",
"name":"H+",
"compartment":"p",
"charge":1,
"formula":"H",
"notes":{
"original_bigg_ids":[
"h_p"
]
},
"annotation":{
"bigg.metabolite":[
"h"
],
"biocyc":[
"META:PROTON"
],
"chebi":[
"CHEBI:5584",
"CHEBI:13357",
"CHEBI:15378",
"CHEBI:10744"
],
"hmdb":[
"HMDB59597"
],
"inchi_key":[
"GPRLSGONYQIRFK-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00080"
],
"metanetx.chemical":[
"MNXM1"
],
"reactome.compound":[
"2000349",
"425978",
"74722",
"428040",
"427899",
"428548",
"156540",
"70106",
"425969",
"1132304",
"5668577",
"1470067",
"163953",
"193465",
"113529",
"351626",
"425999",
"194688",
"374900",
"2872447",
"372511"
],
"sabiork":[
"39"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00067"
]
}
},
{
"id":"fmnh2_c",
"name":"Reduced FMN",
"compartment":"c",
"charge":-2,
"formula":"C17H21N4O9P",
"notes":{
"original_bigg_ids":[
"fmnh2_c"
]
},
"annotation":{
"bigg.metabolite":[
"fmnh2"
],
"biocyc":[
"META:FMNH2"
],
"chebi":[
"CHEBI:133886",
"CHEBI:21128",
"CHEBI:8782",
"CHEBI:13318",
"CHEBI:42517",
"CHEBI:57618",
"CHEBI:16048",
"CHEBI:15017"
],
"hmdb":[
"HMDB01142"
],
"inchi_key":[
"YTNIXZGTHTVJBW-SCRDCRAPSA-L"
],
"kegg.compound":[
"C01847"
],
"metanetx.chemical":[
"MNXM208"
],
"sabiork":[
"2325"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01270"
]
}
},
{
"id":"lycop_c",
"name":"Lycopene",
"compartment":"c",
"charge":0,
"formula":"C40H56",
"notes":{
"original_bigg_ids":[
"lyc_c"
]
},
"annotation":{
"bigg.metabolite":[
"lycop"
],
"biocyc":[
"META:CPD1F-114"
],
"chebi":[
"CHEBI:15948",
"CHEBI:26367",
"CHEBI:43789",
"CHEBI:14541",
"CHEBI:6596"
],
"hmdb":[
"HMDB03000"
],
"inchi_key":[
"OAIJSZIZWZSQBC-GYZMGTAESA-N"
],
"kegg.compound":[
"C05432"
],
"lipidmaps":[
"LMPR01070257"
],
"metanetx.chemical":[
"MNXM445"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03217"
]
}
},
{
"id":"nadph_c",
"name":"Nicotinamide adenine dinucleotide phosphate - reduced",
"compartment":"c",
"charge":-4,
"formula":"C21H26N7O17P3",
"notes":{
"original_bigg_ids":[
"nadph_c"
]
},
"annotation":{
"bigg.metabolite":[
"nadph"
],
"biocyc":[
"META:NADPH"
],
"chebi":[
"CHEBI:16474",
"CHEBI:7425",
"CHEBI:57783",
"CHEBI:21904",
"CHEBI:13399",
"CHEBI:13400",
"CHEBI:44286"
],
"hmdb":[
"HMDB06341",
"HMDB00221",
"HMDB00799"
],
"inchi_key":[
"ACFIXJIJDZMPPO-NNYOXOHSSA-J"
],
"kegg.compound":[
"C00005"
],
"metanetx.chemical":[
"MNXM6"
],
"reactome.compound":[
"113600",
"6790135",
"113602",
"113601",
"2000347",
"351627",
"29364",
"5623644",
"194725"
],
"sabiork":[
"1262"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00005"
]
}
},
{
"id":"rdmbzi_c",
"name":"N1-(alpha-D-ribosyl)-5,6-dimethylbenzimidazole",
"compartment":"c",
"charge":0,
"formula":"C14H18N2O4",
"notes":{
"original_bigg_ids":[
"rdmbzi_c"
]
},
"annotation":{
"bigg.metabolite":[
"rdmbzi"
],
"biocyc":[
"META:ALPHA-RIBAZOLE"
],
"chebi":[
"CHEBI:10329"
],
"hmdb":[
"HMDB11112"
],
"inchi_key":[
"HLRUKOJSWOKCPP-SYQHCUMBSA-N"
],
"kegg.compound":[
"C05775"
],
"metanetx.chemical":[
"MNXM1539"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03423"
]
}
},
{
"id":"cbp_c",
"name":"Carbamoyl phosphate",
"compartment":"c",
"charge":-2,
"formula":"CH2NO5P",
"notes":{
"original_bigg_ids":[
"cbp_c"
]
},
"annotation":{
"bigg.metabolite":[
"cbp"
],
"biocyc":[
"META:CARBAMOYL-P"
],
"chebi":[
"CHEBI:13942",
"CHEBI:23005",
"CHEBI:3389",
"CHEBI:58228",
"CHEBI:17672",
"CHEBI:41567"
],
"hmdb":[
"HMDB01096"
],
"inchi_key":[
"FFQKYPRQEYGKAF-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00169"
],
"metanetx.chemical":[
"MNXM138"
],
"reactome.compound":[
"29676",
"111647"
],
"sabiork":[
"1311"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00146"
]
}
},
{
"id":"5mthf_c",
"name":"5-Methyltetrahydrofolate",
"compartment":"c",
"charge":-2,
"formula":"C20H23N7O6",
"notes":{
"original_bigg_ids":[
"5mthf_c"
]
},
"annotation":{
"bigg.metabolite":[
"5mthf"
],
"biocyc":[
"META:5-METHYL-THF"
],
"chebi":[
"CHEBI:18608",
"CHEBI:12146",
"CHEBI:136009",
"CHEBI:2097",
"CHEBI:20612",
"CHEBI:15641"
],
"hmdb":[
"HMDB01396"
],
"inchi_key":[
"ZNOVTXRBGFNYRX-STQMWFEESA-L"
],
"kegg.compound":[
"C00440"
],
"kegg.drug":[
"D09353"
],
"metanetx.chemical":[
"MNXM318"
],
"reactome.compound":[
"200709",
"200665"
],
"sabiork":[
"2051"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00345"
]
}
},
{
"id":"citr__L_c",
"name":"L-Citrulline",
"compartment":"c",
"charge":0,
"formula":"C6H13N3O3",
"notes":{
"original_bigg_ids":[
"citr__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"citr__L"
],
"biocyc":[
"META:L-CITRULLINE"
],
"chebi":[
"CHEBI:41489",
"CHEBI:3730",
"CHEBI:18211",
"CHEBI:21257",
"CHEBI:16349",
"CHEBI:13092",
"CHEBI:6203",
"CHEBI:66922",
"CHEBI:14002",
"CHEBI:57743"
],
"hmdb":[
"HMDB00904"
],
"inchi_key":[
"RHGKLRLOHDJJDR-BYPYZUCNSA-N"
],
"kegg.compound":[
"C00327"
],
"kegg.drug":[
"D07706"
],
"metanetx.chemical":[
"MNXM211"
],
"reactome.compound":[
"113567",
"29968"
],
"sabiork":[
"1329"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00274"
]
}
},
{
"id":"mi3p__D_c",
"name":"1D-myo-Inositol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C6H11O9P",
"notes":{
"original_bigg_ids":[
"mi3p__D_c"
]
},
"annotation":{
"bigg.metabolite":[
"mi3p__D"
],
"biocyc":[
"META:1-L-MYO-INOSITOL-1-P"
],
"chebi":[
"CHEBI:814",
"CHEBI:18169",
"CHEBI:11365",
"CHEBI:19196",
"CHEBI:58401"
],
"hmdb":[
"HMDB06814",
"HMDB00213"
],
"inchi_key":[
"INAPMGSXUVUWAF-PTQMNWPWSA-L"
],
"kegg.compound":[
"C04006"
],
"metanetx.chemical":[
"MNXM540"
],
"reactome.compound":[
"1629731"
],
"sabiork":[
"7010"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02484"
]
}
},
{
"id":"2ahhmp_c",
"name":"2 Amino 4 hydroxy 6 hydroxymethyl 7 8 dihydropteridine C7H9N5O2",
"compartment":"c",
"charge":0,
"formula":"C7H9N5O2",
"notes":{
"original_bigg_ids":[
"2ahhmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"2ahhmp"
],
"metanetx.chemical":[
"MNXM146055"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pdx5p_c",
"name":"Pyridoxine 5'-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C8H10NO6P",
"notes":{
"original_bigg_ids":[
"pdx5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"pdx5p"
],
"biocyc":[
"META:PYRIDOXINE-5P"
],
"chebi":[
"CHEBI:26430",
"CHEBI:28803",
"CHEBI:45202",
"CHEBI:58589",
"CHEBI:8672"
],
"hmdb":[
"HMDB01319"
],
"inchi_key":[
"WHOMFKWHIQZTHY-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00627"
],
"metanetx.chemical":[
"MNXM454"
],
"reactome.compound":[
"964952"
],
"sabiork":[
"1684"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00478"
]
}
},
{
"id":"3hoctACP_c",
"name":"(R)-3-Hydroxyoctanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C8H15O2SR",
"notes":{
"original_bigg_ids":[
"3hoctACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hoctACP"
],
"biocyc":[
"META:3-Hydroxy-octanoyl-ACPs"
],
"kegg.compound":[
"C04620"
],
"metanetx.chemical":[
"MNXM10019"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11483"
]
}
},
{
"id":"dvpchlda_c",
"name":"Divinylprotochlorophyllide a",
"compartment":"c",
"charge":-1,
"formula":"C35H29MgN4O5",
"notes":{
"original_bigg_ids":[
"dvpchlda_c"
]
},
"annotation":{
"bigg.metabolite":[
"dvpchlda"
],
"metanetx.chemical":[
"MNXM147096"
],
"sbo":"SBO:0000247"
}
},
{
"id":"tmrs2eACP_c",
"name":"Trans-Tetradec-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C14H25OSR",
"notes":{
"original_bigg_ids":[
"tmrs2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"tmrs2eACP"
],
"biocyc":[
"META:Tetradec-2-enoyl-ACPs"
],
"chebi":[
"CHEBI:10735"
],
"kegg.compound":[
"C05760"
],
"lipidmaps":[
"LMFA07060018"
],
"metanetx.chemical":[
"MNXM24297"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11467"
]
}
},
{
"id":"fru_c",
"name":"D-Fructose",
"compartment":"c",
"charge":0,
"formula":"C6H12O6",
"notes":{
"original_bigg_ids":[
"fru_c"
]
},
"annotation":{
"bigg.metabolite":[
"fru"
],
"biocyc":[
"META:D-Fructopyranose",
"META:Fructofuranose",
"META:CPD-15382",
"META:FRU"
],
"chebi":[
"CHEBI:47424",
"CHEBI:28757",
"CHEBI:24110",
"CHEBI:20929",
"CHEBI:4119",
"CHEBI:15824",
"CHEBI:5172",
"CHEBI:24104",
"CHEBI:12923",
"CHEBI:4118",
"CHEBI:37714",
"CHEBI:37721",
"CHEBI:48095"
],
"hmdb":[
"HMDB62538"
],
"inchi_key":[
"RFSUNEUAIZKAJO-VRPWFDPXSA-N"
],
"kegg.compound":[
"C01496",
"C05003",
"C00095",
"C10906"
],
"kegg.drug":[
"D00114"
],
"metanetx.chemical":[
"MNXM175"
],
"reactome.compound":[
"189049",
"29532"
],
"sabiork":[
"25055",
"1463",
"1464"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00082",
"cpd19015",
"cpd27040"
]
}
},
{
"id":"2mecdp_c",
"name":"2-C-methyl-D-erythritol 2,4-cyclodiphosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H10O9P2",
"notes":{
"original_bigg_ids":[
"2mecdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"2mecdp"
],
"biocyc":[
"META:2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE"
],
"chebi":[
"CHEBI:1029",
"CHEBI:11481",
"CHEBI:58483",
"CHEBI:11482",
"CHEBI:18425"
],
"inchi_key":[
"SFRQRNJMIIUYDI-UHNVWZDZSA-L"
],
"kegg.compound":[
"C11453"
],
"metanetx.chemical":[
"MNXM1168"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08301"
]
}
},
{
"id":"cbasp_c",
"name":"N-Carbamoyl-L-aspartate",
"compartment":"c",
"charge":-2,
"formula":"C5H6N2O5",
"notes":{
"original_bigg_ids":[
"cbasp_c"
]
},
"annotation":{
"bigg.metabolite":[
"cbasp"
],
"biocyc":[
"META:CARBAMYUL-L-ASPARTATE"
],
"chebi":[
"CHEBI:12593",
"CHEBI:21687",
"CHEBI:21688",
"CHEBI:44316",
"CHEBI:12496",
"CHEBI:7257",
"CHEBI:32814",
"CHEBI:15859"
],
"hmdb":[
"HMDB00828"
],
"inchi_key":[
"HLKXYZVTANABHZ-REOHCLBHSA-L"
],
"kegg.compound":[
"C00438"
],
"metanetx.chemical":[
"MNXM465"
],
"reactome.compound":[
"111628"
],
"sabiork":[
"2049"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00343"
]
}
},
{
"id":"10fthf_c",
"name":"10-Formyltetrahydrofolate",
"compartment":"c",
"charge":-2,
"formula":"C20H21N7O7",
"notes":{
"original_bigg_ids":[
"10fthf_c"
]
},
"annotation":{
"bigg.metabolite":[
"10fthf"
],
"biocyc":[
"META:10-FORMYL-THF"
],
"chebi":[
"CHEBI:19108",
"CHEBI:15637",
"CHEBI:698",
"CHEBI:19109",
"CHEBI:11304",
"CHEBI:57454"
],
"hmdb":[
"HMDB00972"
],
"inchi_key":[
"AUFGTPPARQZWDO-YPMHNXCESA-L"
],
"kegg.compound":[
"C00234"
],
"metanetx.chemical":[
"MNXM237"
],
"reactome.compound":[
"5389850",
"419151"
],
"sabiork":[
"1318"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00201"
]
}
},
{
"id":"4r5au_c",
"name":"4-(1-D-Ribitylamino)-5-aminouracil",
"compartment":"c",
"charge":0,
"formula":"C9H16N4O6",
"notes":{
"original_bigg_ids":[
"4r5au_c"
]
},
"annotation":{
"bigg.metabolite":[
"4r5au"
],
"biocyc":[
"META:AMINO-RIBOSYLAMINO-1H-3H-PYR-DIONE"
],
"chebi":[
"CHEBI:20283",
"CHEBI:11929",
"CHEBI:57573",
"CHEBI:1761",
"CHEBI:15934",
"CHEBI:52403"
],
"inchi_key":[
"XKQZIXVJVUPORE-RPDRRWSUSA-N"
],
"kegg.compound":[
"C04732"
],
"metanetx.chemical":[
"MNXM791"
],
"sabiork":[
"7525"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29668",
"cpd02882"
]
}
},
{
"id":"6pgl_c",
"name":"6-phospho-D-glucono-1,5-lactone",
"compartment":"c",
"charge":-2,
"formula":"C6H9O9P",
"notes":{
"original_bigg_ids":[
"6pgl_c"
]
},
"annotation":{
"bigg.metabolite":[
"6pgl"
],
"biocyc":[
"META:D-6-P-GLUCONO-DELTA-LACTONE"
],
"chebi":[
"CHEBI:12233",
"CHEBI:4160",
"CHEBI:57955",
"CHEBI:16938",
"CHEBI:20989",
"CHEBI:12958"
],
"hmdb":[
"HMDB62628",
"HMDB01127"
],
"inchi_key":[
"IJOJIVNDFQSGAB-SQOUGZDYSA-L"
],
"kegg.compound":[
"C01236"
],
"metanetx.chemical":[
"MNXM429"
],
"reactome.compound":[
"31467"
],
"sabiork":[
"1366"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00911"
]
}
},
{
"id":"skm_c",
"name":"Shikimate",
"compartment":"c",
"charge":-1,
"formula":"C7H9O5",
"notes":{
"original_bigg_ids":[
"skm_c"
]
},
"annotation":{
"bigg.metabolite":[
"skm"
],
"biocyc":[
"META:SHIKIMATE"
],
"chebi":[
"CHEBI:15083",
"CHEBI:26664",
"CHEBI:9133",
"CHEBI:45740",
"CHEBI:26662",
"CHEBI:16119",
"CHEBI:26663",
"CHEBI:36208"
],
"hmdb":[
"HMDB03070"
],
"inchi_key":[
"JXOHGGNKMLTUBP-HSUXUTPPSA-M"
],
"kegg.compound":[
"C00493"
],
"metanetx.chemical":[
"MNXM602"
],
"reactome.compound":[
"964932"
],
"sabiork":[
"5117"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00383"
]
}
},
{
"id":"gar_c",
"name":"N1-(5-Phospho-D-ribosyl)glycinamide",
"compartment":"c",
"charge":-1,
"formula":"C7H14N2O8P",
"notes":{
"original_bigg_ids":[
"gar_c"
]
},
"annotation":{
"bigg.metabolite":[
"gar"
],
"biocyc":[
"META:5-PHOSPHO-RIBOSYL-GLYCINEAMIDE"
],
"chebi":[
"CHEBI:20499",
"CHEBI:12623",
"CHEBI:58457",
"CHEBI:18349",
"CHEBI:1983"
],
"hmdb":[
"HMDB02022"
],
"inchi_key":[
"OBQMLSFOUZUIOB-HJZCUYRDSA-M"
],
"kegg.compound":[
"C03838"
],
"metanetx.chemical":[
"MNXM463"
],
"sabiork":[
"1887"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02394"
]
}
},
{
"id":"dnad_c",
"name":"Deamino-NAD+",
"compartment":"c",
"charge":-2,
"formula":"C21H24N6O15P2",
"notes":{
"original_bigg_ids":[
"dnad_c"
]
},
"annotation":{
"bigg.metabolite":[
"dnad"
],
"biocyc":[
"META:DEAMIDO-NAD"
],
"chebi":[
"CHEBI:14104",
"CHEBI:58437",
"CHEBI:14103",
"CHEBI:4340",
"CHEBI:14105",
"CHEBI:18304",
"CHEBI:23567"
],
"hmdb":[
"HMDB01179"
],
"inchi_key":[
"SENPVEZBRZQVST-HISDBWNOSA-L"
],
"kegg.compound":[
"C00857"
],
"metanetx.chemical":[
"MNXM309"
],
"reactome.compound":[
"8938090",
"200499",
"197256"
],
"sabiork":[
"1349"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00638"
]
}
},
{
"id":"datp_c",
"name":"DATP C10H12N5O12P3",
"compartment":"c",
"charge":-4,
"formula":"C10H12N5O12P3",
"notes":{
"original_bigg_ids":[
"datp_c"
]
},
"annotation":{
"bigg.metabolite":[
"datp"
],
"biocyc":[
"META:DATP"
],
"chebi":[
"CHEBI:495505",
"CHEBI:19238",
"CHEBI:42290",
"CHEBI:10491",
"CHEBI:61404",
"CHEBI:16284",
"CHEBI:14069"
],
"hmdb":[
"HMDB01532"
],
"inchi_key":[
"SUYVUBYJARFZHO-RRKCRQDMSA-J"
],
"kegg.compound":[
"C00131"
],
"metanetx.chemical":[
"MNXM286"
],
"reactome.compound":[
"110644"
],
"sabiork":[
"1307"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00115"
]
}
},
{
"id":"ppp9_c",
"name":"Protoporphyrin",
"compartment":"c",
"charge":-2,
"formula":"C34H32N4O4",
"notes":{
"original_bigg_ids":[
"ppp9_c"
]
},
"annotation":{
"bigg.metabolite":[
"ppp9"
],
"biocyc":[
"META:PROTOPORPHYRIN_IX"
],
"chebi":[
"CHEBI:15430",
"CHEBI:14961",
"CHEBI:26358",
"CHEBI:8592",
"CHEBI:14960",
"CHEBI:14959",
"CHEBI:36159",
"CHEBI:57306"
],
"hmdb":[
"HMDB00241"
],
"inchi_key":[
"KSFOVUSSGSKXFI-UJJXFSCMSA-L"
],
"kegg.compound":[
"C02191"
],
"metanetx.chemical":[
"MNXM346"
],
"reactome.compound":[
"189487",
"189463"
],
"sabiork":[
"6061"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01476"
]
}
},
{
"id":"prlp_c",
"name":"5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]-1-(5-phosphoribosyl)imidazole-4-carboxamide",
"compartment":"c",
"charge":-4,
"formula":"C15H21N5O15P2",
"notes":{
"original_bigg_ids":[
"prlp_c"
]
},
"annotation":{
"bigg.metabolite":[
"prlp"
],
"biocyc":[
"META:PHOSPHORIBULOSYL-FORMIMINO-AICAR-P"
],
"chebi":[
"CHEBI:39698",
"CHEBI:21471",
"CHEBI:7090",
"CHEBI:58525",
"CHEBI:27735",
"CHEBI:12100"
],
"inchi_key":[
"BLKFNHOCHNCLII-GHVQHMAVSA-J"
],
"kegg.compound":[
"C04916"
],
"metanetx.chemical":[
"MNXM1408"
],
"sabiork":[
"7675"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02991"
]
}
},
{
"id":"for_c",
"name":"Formate",
"compartment":"c",
"charge":-1,
"formula":"CHO2",
"notes":{
"original_bigg_ids":[
"for_c"
]
},
"annotation":{
"bigg.metabolite":[
"for"
],
"biocyc":[
"META:CPD1G-1532",
"META:CPD1G-1535",
"META:FORMATE",
"META:CPD-9845",
"META:CPD1G-1534",
"META:CARBOXYL-GROUP",
"META:CPD1G-1533"
],
"chebi":[
"CHEBI:24081",
"CHEBI:30751",
"CHEBI:15740",
"CHEBI:5145",
"CHEBI:42460",
"CHEBI:14276",
"CHEBI:24082"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/9a9d20ae-b6ec-40a9-93ca-1de20597b1ed",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/09c1ad08-016e-4477-8840-b97a031eae23",
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/bf16ab32-cb3c-4427-a65a-089ab754823e",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/34fe3cd9-9b0b-46b0-a1c5-8a66509f1919",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/1d077cf2-3f9f-4163-aa49-0fca1b2b3ab3"
],
"hmdb":[
"HMDB00142"
],
"inchi_key":[
"BDAGIHXWWSANSR-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00058"
],
"metanetx.chemical":[
"MNXM39"
],
"reactome.compound":[
"29460",
"194712",
"389585",
"6801451"
],
"sabiork":[
"1285"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00047",
"cpd22511"
]
}
},
{
"id":"mobd_c",
"name":"Molybdate",
"compartment":"c",
"charge":-2,
"formula":"MoO4",
"notes":{
"original_bigg_ids":[
"mobd_c"
]
},
"annotation":{
"bigg.metabolite":[
"mobd"
],
"biocyc":[
"META:CPD-3"
],
"chebi":[
"CHEBI:36263",
"CHEBI:25368",
"CHEBI:36264",
"CHEBI:25371",
"CHEBI:6967"
],
"hmdb":[
"HMDB12260"
],
"inchi_key":[
"MEFBJEMVZONFCJ-UHFFFAOYSA-N"
],
"kegg.compound":[
"C06232"
],
"metanetx.chemical":[
"MNXM1026"
],
"reactome.compound":[
"947561"
],
"sabiork":[
"8470"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11574"
]
}
},
{
"id":"dmtphllqne_c",
"name":"Demethylphylloquinone",
"compartment":"c",
"charge":0,
"formula":"C30H44O2",
"notes":{
"original_bigg_ids":[
"dmtphllqne_c"
]
},
"annotation":{
"bigg.metabolite":[
"dmtphllqne"
],
"biocyc":[
"META:CPD-6947"
],
"chebi":[
"CHEBI:31087"
],
"hmdb":[
"HMDB04649"
],
"inchi_key":[
"UDYIPZFWVJJQJF-KQPZCCJBSA-N"
],
"kegg.compound":[
"C13309"
],
"metanetx.chemical":[
"MNXM35431"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd09410"
]
}
},
{
"id":"toctd2eACP_c",
"name":"Trans-octadec-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C18H33OSR",
"notes":{
"original_bigg_ids":[
"toctd2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"toctd2eACP"
],
"biocyc":[
"META:Octadec-2-enoyl-ACPs"
],
"chebi":[
"CHEBI:80388"
],
"kegg.compound":[
"C16221"
],
"metanetx.chemical":[
"MNXM2573"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd14940",
"cpd15572"
]
}
},
{
"id":"bm_memlip_c",
"name":"Lipid component of biomass",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_memlip_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_memlip"
],
"sbo":"SBO:0000247"
}
},
{
"id":"cholphya_c",
"name":"Chlorophyll a",
"compartment":"c",
"charge":0,
"formula":"C55H72MgN4O5",
"notes":{
"original_bigg_ids":[
"cholphya_c"
]
},
"annotation":{
"bigg.metabolite":[
"cholphya"
],
"biocyc":[
"META:CHLOROPHYLL-A"
],
"chebi":[
"CHEBI:48807",
"CHEBI:18230",
"CHEBI:3631",
"CHEBI:58416",
"CHEBI:13974",
"CHEBI:23157"
],
"hmdb":[
"HMDB38578"
],
"inchi_key":[
"VSRAJQZEEBBURZ-ONWAGYJKSA-M"
],
"kegg.compound":[
"C05306"
],
"metanetx.chemical":[
"MNXM46466"
],
"sabiork":[
"2761"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03148"
]
}
},
{
"id":"skm5p_c",
"name":"Shikimate 5-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C7H8O8P",
"notes":{
"original_bigg_ids":[
"skm5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"skm5p"
],
"biocyc":[
"META:SHIKIMATE-5P"
],
"chebi":[
"CHEBI:11886",
"CHEBI:15084",
"CHEBI:17052",
"CHEBI:9134",
"CHEBI:145989",
"CHEBI:20195"
],
"inchi_key":[
"QYOJSKGCWNAKGW-PBXRRBTRSA-K"
],
"kegg.compound":[
"C03175"
],
"metanetx.chemical":[
"MNXM1265"
],
"reactome.compound":[
"964859"
],
"sabiork":[
"1736"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02030"
]
}
},
{
"id":"dad_2_c",
"name":"Deoxyadenosine",
"compartment":"c",
"charge":0,
"formula":"C10H13N5O3",
"notes":{
"original_bigg_ids":[
"dad_2_c"
]
},
"annotation":{
"bigg.metabolite":[
"dad_2"
],
"biocyc":[
"META:DEOXYADENOSINE"
],
"chebi":[
"CHEBI:19234",
"CHEBI:4405",
"CHEBI:40560",
"CHEBI:17256",
"CHEBI:14112",
"CHEBI:40535",
"CHEBI:40565",
"CHEBI:39863"
],
"hmdb":[
"HMDB05778",
"HMDB00101",
"HMDB11722"
],
"inchi_key":[
"OLXZPDWKRNYJJZ-RRKCRQDMSA-N"
],
"kegg.compound":[
"C00559"
],
"metanetx.chemical":[
"MNXM625"
],
"sabiork":[
"1874"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00438"
]
}
},
{
"id":"glc__D_c",
"name":"D-Glucose",
"compartment":"c",
"charge":0,
"formula":"C6H12O6",
"notes":{
"original_bigg_ids":[
"glc__D_c"
]
},
"annotation":{
"bigg.metabolite":[
"glc__D"
],
"biocyc":[
"META:Glucopyranose"
],
"chebi":[
"CHEBI:12965",
"CHEBI:20999",
"CHEBI:4167",
"CHEBI:17634"
],
"hmdb":[
"HMDB00122",
"HMDB06564"
],
"inchi_key":[
"WQZGKKKJIJFFOK-GASJEMHNSA-N"
],
"kegg.compound":[
"C00031"
],
"kegg.drug":[
"D00009"
],
"metanetx.chemical":[
"MNXM41"
],
"sabiork":[
"1406",
"1407"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd26821",
"cpd00027"
]
}
},
{
"id":"biliverd_c",
"name":"Biliverdin cytosol",
"compartment":"c",
"charge":-2,
"formula":"C33H32N4O6",
"notes":{
"original_bigg_ids":[
"biliverd_c"
]
},
"annotation":{
"bigg.metabolite":[
"biliverd"
],
"biocyc":[
"META:BILIVERDINE"
],
"chebi":[
"CHEBI:13901",
"CHEBI:3102",
"CHEBI:17033",
"CHEBI:57991",
"CHEBI:41124",
"CHEBI:13902",
"CHEBI:22875"
],
"hmdb":[
"HMDB01008",
"HMDB02309"
],
"inchi_key":[
"QBUVFDKTZJNUPP-BBROENKCSA-L"
],
"kegg.compound":[
"C00500"
],
"metanetx.chemical":[
"MNXM416"
],
"reactome.compound":[
"189396"
],
"sabiork":[
"5120"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00389"
]
}
},
{
"id":"o2_cx",
"name":"O2 O2",
"compartment":"cx",
"charge":0,
"formula":"O2",
"notes":{
"original_bigg_ids":[
"o2_cx"
]
},
"annotation":{
"bigg.metabolite":[
"o2"
],
"biocyc":[
"META:OXYGEN-MOLECULE"
],
"chebi":[
"CHEBI:7860",
"CHEBI:26689",
"CHEBI:29097",
"CHEBI:15379",
"CHEBI:13416",
"CHEBI:27140",
"CHEBI:29793",
"CHEBI:30491",
"CHEBI:44742",
"CHEBI:23833",
"CHEBI:25366",
"CHEBI:10745"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/d5d12248-82d3-4cf3-b7d0-2e3d096768b4"
],
"hmdb":[
"HMDB01377"
],
"inchi_key":[
"MYMOFIZGZYHOMD-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00007"
],
"kegg.drug":[
"D00003"
],
"metanetx.chemical":[
"MNXM4"
],
"reactome.compound":[
"113534",
"113535",
"113685",
"5668566",
"189461",
"113533",
"1131511",
"352327",
"351593",
"29368",
"1236709"
],
"sabiork":[
"1264"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00007"
]
}
},
{
"id":"pre4_c",
"name":"Precorrin 4",
"compartment":"c",
"charge":-8,
"formula":"C44H44N4O17",
"notes":{
"original_bigg_ids":[
"pre4_c"
]
},
"annotation":{
"bigg.metabolite":[
"pre4"
],
"biocyc":[
"META:CPD-651"
],
"chebi":[
"CHEBI:14873",
"CHEBI:14869",
"CHEBI:26223",
"CHEBI:8373",
"CHEBI:16430",
"CHEBI:57769"
],
"inchi_key":[
"IOBDBIPWYQGVMM-VLMJWMIZSA-F"
],
"kegg.compound":[
"C06407"
],
"metanetx.chemical":[
"MNXM1441"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03834"
]
}
},
{
"id":"orot5p_c",
"name":"Orotidine 5'-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C10H10N2O11P",
"notes":{
"original_bigg_ids":[
"orot5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"orot5p"
],
"biocyc":[
"META:OROTIDINE-5-PHOSPHATE"
],
"chebi":[
"CHEBI:57538",
"CHEBI:15842",
"CHEBI:14699",
"CHEBI:7788",
"CHEBI:25723"
],
"hmdb":[
"HMDB00218"
],
"inchi_key":[
"KYOBSHFOBAOFBF-XVFCMESISA-K"
],
"kegg.compound":[
"C01103"
],
"metanetx.chemical":[
"MNXM519"
],
"reactome.compound":[
"111629"
],
"sabiork":[
"1700"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00810"
]
}
},
{
"id":"citm_c",
"name":"Citramalate",
"compartment":"c",
"charge":-2,
"formula":"C5H6O5",
"notes":{
"original_bigg_ids":[
"citm_c"
]
},
"annotation":{
"bigg.metabolite":[
"citm"
],
"biocyc":[
"META:CPD-14325"
],
"chebi":[
"CHEBI:23319",
"CHEBI:13997",
"CHEBI:3725",
"CHEBI:15584"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/20fadf46-7d23-4f40-a4d4-f54daa8332a4"
],
"hmdb":[
"HMDB00426"
],
"inchi_key":[
"XFTRTWQBIOMVPK-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00815"
],
"metanetx.chemical":[
"MNXM2357"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00607"
]
}
},
{
"id":"udpg_c",
"name":"UDPglucose",
"compartment":"c",
"charge":-2,
"formula":"C15H22N2O17P2",
"notes":{
"original_bigg_ids":[
"udpg_c"
]
},
"annotation":{
"bigg.metabolite":[
"udpg"
],
"biocyc":[
"META:CPD-12575"
],
"chebi":[
"CHEBI:13505",
"CHEBI:52249",
"CHEBI:9845",
"CHEBI:46228",
"CHEBI:46229",
"CHEBI:58367",
"CHEBI:13498",
"CHEBI:28532",
"CHEBI:42885",
"CHEBI:27234",
"CHEBI:18066",
"CHEBI:9895",
"CHEBI:58885",
"CHEBI:22103"
],
"hmdb":[
"HMDB60079"
],
"inchi_key":[
"HSCJRCZFDFQWRP-RDKQLNKOSA-L"
],
"kegg.compound":[
"C00029"
],
"kegg.glycan":[
"G10608"
],
"metanetx.chemical":[
"MNXM722710"
],
"reactome.compound":[
"173594",
"744227",
"29410"
],
"sabiork":[
"3918",
"1277"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00026",
"cpd28293"
]
}
},
{
"id":"ggdp_c",
"name":"Geranylgeranyl diphosphate C20H33O7P2",
"compartment":"c",
"charge":-3,
"formula":"C20H33O7P2",
"notes":{
"original_bigg_ids":[
"ggdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"ggdp"
],
"biocyc":[
"META:GERANYLGERANYL-PP"
],
"chebi":[
"CHEBI:14300",
"CHEBI:42968",
"CHEBI:57533",
"CHEBI:58756",
"CHEBI:19786",
"CHEBI:24230",
"CHEBI:48861",
"CHEBI:15831",
"CHEBI:5335"
],
"hmdb":[
"HMDB04486",
"HMDB60109"
],
"inchi_key":[
"OINNEUNVOZHBOX-QIRCYJPOSA-K"
],
"kegg.compound":[
"C00353"
],
"lipidmaps":[
"LMPR0104010001"
],
"metanetx.chemical":[
"MNXM139"
],
"reactome.compound":[
"6806657"
],
"sabiork":[
"5054"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00289"
]
}
},
{
"id":"5mta_c",
"name":"5-Methylthioadenosine",
"compartment":"c",
"charge":0,
"formula":"C11H15N5O3S",
"notes":{
"original_bigg_ids":[
"5mta_c"
]
},
"annotation":{
"bigg.metabolite":[
"5mta"
],
"biocyc":[
"META:5-METHYLTHIOADENOSINE"
],
"chebi":[
"CHEBI:1966",
"CHEBI:18175",
"CHEBI:12064",
"CHEBI:14605",
"CHEBI:20494",
"CHEBI:12055",
"CHEBI:20491",
"CHEBI:17509",
"CHEBI:44181",
"CHEBI:1986",
"CHEBI:12771"
],
"hmdb":[
"HMDB01173"
],
"inchi_key":[
"WUUGFSXJNOTRMR-IOSLPCCCSA-N"
],
"kegg.compound":[
"C00170"
],
"metanetx.chemical":[
"MNXM150"
],
"reactome.compound":[
"5279412",
"353106"
],
"sabiork":[
"1960"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00147"
]
}
},
{
"id":"k_c",
"name":"Potassium",
"compartment":"c",
"charge":1,
"formula":"K",
"notes":{
"original_bigg_ids":[
"k_c"
]
},
"annotation":{
"bigg.metabolite":[
"k"
],
"biocyc":[
"META:K+"
],
"chebi":[
"CHEBI:26219",
"CHEBI:29103",
"CHEBI:8345",
"CHEBI:49685"
],
"hmdb":[
"HMDB00586"
],
"inchi_key":[
"NPYPAHLBTDXSSS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00238"
],
"kegg.drug":[
"D08403"
],
"metanetx.chemical":[
"MNXM95"
],
"reactome.compound":[
"74126",
"5626313",
"29804"
],
"sabiork":[
"21"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00205"
]
}
},
{
"id":"pre3a_c",
"name":"Precorrin 3 A",
"compartment":"c",
"charge":-7,
"formula":"C43H43N4O16",
"notes":{
"original_bigg_ids":[
"pre3a_c"
]
},
"annotation":{
"bigg.metabolite":[
"pre3a"
],
"biocyc":[
"META:CPD-642"
],
"chebi":[
"CHEBI:14871",
"CHEBI:58561",
"CHEBI:26221",
"CHEBI:28307",
"CHEBI:8371"
],
"inchi_key":[
"AILJETHLKULYHE-IHDLTXBCSA-G"
],
"kegg.compound":[
"C05772"
],
"metanetx.chemical":[
"MNXM1290"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03420"
]
}
},
{
"id":"amet_c",
"name":"S-Adenosyl-L-methionine",
"compartment":"c",
"charge":1,
"formula":"C15H23N6O5S",
"notes":{
"original_bigg_ids":[
"amet_c"
]
},
"annotation":{
"bigg.metabolite":[
"amet"
],
"biocyc":[
"META:S-ADENOSYLMETHIONINE"
],
"chebi":[
"CHEBI:33442",
"CHEBI:12757",
"CHEBI:10833",
"CHEBI:59789",
"CHEBI:67040",
"CHEBI:8946",
"CHEBI:12742",
"CHEBI:12760",
"CHEBI:10786",
"CHEBI:22036",
"CHEBI:527887",
"CHEBI:15414",
"CHEBI:45607"
],
"hmdb":[
"HMDB01185",
"HMDB62709"
],
"inchi_key":[
"MEFKEPWMEQBLKI-AIRLBKTGSA-O"
],
"kegg.compound":[
"C00019"
],
"metanetx.chemical":[
"MNXM16"
],
"reactome.compound":[
"2162265",
"5279190",
"77087",
"71284",
"353113"
],
"sabiork":[
"1272"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00017"
]
}
},
{
"id":"dcdp_c",
"name":"DCDP C9H12N3O10P2",
"compartment":"c",
"charge":-3,
"formula":"C9H12N3O10P2",
"notes":{
"original_bigg_ids":[
"dcdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dcdp"
],
"biocyc":[
"META:DCDP"
],
"chebi":[
"CHEBI:19241",
"CHEBI:28846",
"CHEBI:58593",
"CHEBI:10492",
"CHEBI:49966"
],
"hmdb":[
"HMDB01245"
],
"inchi_key":[
"FTDHDKPUHBLBTL-SHYZEUOFSA-K"
],
"kegg.compound":[
"C00705"
],
"metanetx.chemical":[
"MNXM411"
],
"sabiork":[
"1347"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00533"
]
}
},
{
"id":"dtdprmn_c",
"name":"DTDP-L-rhamnose",
"compartment":"c",
"charge":-2,
"formula":"C16H24N2O15P2",
"notes":{
"original_bigg_ids":[
"dtdprmn_c"
]
},
"annotation":{
"bigg.metabolite":[
"dtdprmn"
],
"biocyc":[
"META:DTDP-RHAMNOSE"
],
"chebi":[
"CHEBI:15774",
"CHEBI:23547",
"CHEBI:46114",
"CHEBI:61119",
"CHEBI:35452",
"CHEBI:10518",
"CHEBI:14083",
"CHEBI:57510"
],
"hmdb":[
"HMDB06354"
],
"inchi_key":[
"ZOSQFDVXNQFKBY-CGAXJHMRSA-L"
],
"kegg.compound":[
"C03319"
],
"metanetx.chemical":[
"MNXM899"
],
"sabiork":[
"1579"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02113"
]
}
},
{
"id":"rb15bp_c",
"name":"D-Ribulose 1,5-bisphosphate",
"compartment":"c",
"charge":-4,
"formula":"C5H8O11P2",
"notes":{
"original_bigg_ids":[
"rb15bp_c"
]
},
"annotation":{
"bigg.metabolite":[
"rb15bp"
],
"biocyc":[
"META:D-RIBULOSE-15-P2"
],
"chebi":[
"CHEBI:21087",
"CHEBI:57870",
"CHEBI:13017",
"CHEBI:4242",
"CHEBI:16710",
"CHEBI:45480"
],
"inchi_key":[
"YAHZABJORDUQGO-NQXXGFSBSA-J"
],
"kegg.compound":[
"C01182"
],
"metanetx.chemical":[
"MNXM1276"
],
"sabiork":[
"1502"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00871"
]
}
},
{
"id":"2ippm_c",
"name":"2-Isopropylmaleate",
"compartment":"c",
"charge":-2,
"formula":"C7H8O4",
"notes":{
"original_bigg_ids":[
"2ippm_c"
]
},
"annotation":{
"bigg.metabolite":[
"2ippm"
],
"biocyc":[
"META:CPD-9451"
],
"chebi":[
"CHEBI:17275",
"CHEBI:19668",
"CHEBI:11604",
"CHEBI:58085",
"CHEBI:1179"
],
"hmdb":[
"HMDB12241"
],
"inchi_key":[
"NJMGRJLQRLFQQX-HYXAFXHYSA-L"
],
"kegg.compound":[
"C02631"
],
"metanetx.chemical":[
"MNXM1706"
],
"sabiork":[
"2472"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01710"
]
}
},
{
"id":"pcrd_u",
"name":"Plastocyanin(Cu+)",
"compartment":"u",
"charge":0,
"formula":"R",
"notes":{
"original_bigg_ids":[
"pccu1p_u"
]
},
"annotation":{
"bigg.metabolite":[
"pcrd"
],
"metanetx.chemical":[
"MNXM145921"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30034"
]
}
},
{
"id":"3hbutACP_c",
"name":"(R)-3-Hydroxybutanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C4H7O2SR",
"notes":{
"original_bigg_ids":[
"3hbutACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hbutACP"
],
"biocyc":[
"META:Beta-3-hydroxybutyryl-ACPs"
],
"kegg.compound":[
"C04618"
],
"metanetx.chemical":[
"MNXM91793"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11478"
]
}
},
{
"id":"myrsACP_c",
"name":"Myristoyl-ACP (n-C14:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C14H27ORS",
"notes":{
"original_bigg_ids":[
"myrsACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"myrsACP"
],
"metanetx.chemical":[
"MNXM89779"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pro__L_c",
"name":"L-Proline",
"compartment":"c",
"charge":0,
"formula":"C5H9NO2",
"notes":{
"original_bigg_ids":[
"pro__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"pro__L"
],
"biocyc":[
"META:PRO"
],
"chebi":[
"CHEBI:26271",
"CHEBI:60039",
"CHEBI:45100",
"CHEBI:13154",
"CHEBI:184637",
"CHEBI:17203",
"CHEBI:21373",
"CHEBI:32862",
"CHEBI:32872",
"CHEBI:45040",
"CHEBI:32871",
"CHEBI:6286",
"CHEBI:32864",
"CHEBI:42067",
"CHEBI:45159",
"CHEBI:58054"
],
"hmdb":[
"HMDB00162"
],
"inchi_key":[
"ONIBWKKTOPOVIA-BYPYZUCNSA-N"
],
"kegg.compound":[
"C00148",
"C16435"
],
"kegg.drug":[
"D00035"
],
"metanetx.chemical":[
"MNXM114"
],
"reactome.compound":[
"352033",
"379717",
"113538"
],
"sabiork":[
"25536",
"82"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00129",
"cpd15140"
]
}
},
{
"id":"histd_c",
"name":"L-Histidinol",
"compartment":"c",
"charge":1,
"formula":"C6H12N3O",
"notes":{
"original_bigg_ids":[
"histd_c"
]
},
"annotation":{
"bigg.metabolite":[
"histd"
],
"biocyc":[
"META:HISTIDINOL"
],
"chebi":[
"CHEBI:13118",
"CHEBI:57699",
"CHEBI:16255",
"CHEBI:6241",
"CHEBI:21326"
],
"hmdb":[
"HMDB03431"
],
"inchi_key":[
"ZQISRDCJNBUVMM-YFKPBYRVSA-O"
],
"kegg.compound":[
"C00860"
],
"metanetx.chemical":[
"MNXM1281"
],
"sabiork":[
"5283"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00641"
]
}
},
{
"id":"cpppg3_c",
"name":"Coproporphyrinogen III",
"compartment":"c",
"charge":-4,
"formula":"C36H40N4O8",
"notes":{
"original_bigg_ids":[
"cpppg3_c"
]
},
"annotation":{
"bigg.metabolite":[
"cpppg3"
],
"biocyc":[
"META:COPROPORPHYRINOGEN_III"
],
"chebi":[
"CHEBI:15439",
"CHEBI:3880",
"CHEBI:57309",
"CHEBI:41560",
"CHEBI:23386",
"CHEBI:14020"
],
"hmdb":[
"HMDB01261"
],
"inchi_key":[
"NIUVHXTXUXOFEB-UHFFFAOYSA-J"
],
"kegg.compound":[
"C03263"
],
"metanetx.chemical":[
"MNXM410"
],
"reactome.compound":[
"189455",
"189411"
],
"sabiork":[
"8129",
"6515"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02083"
]
}
},
{
"id":"glutrna_c",
"name":"L-Glutamyl-tRNA(Glu)",
"compartment":"c",
"charge":0,
"formula":"C20H28N6O13PR",
"notes":{
"original_bigg_ids":[
"glutrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"glutrna"
],
"chebi":[
"CHEBI:29157",
"CHEBI:13114",
"CHEBI:6232"
],
"kegg.compound":[
"C02987"
],
"metanetx.chemical":[
"MNXM89752"
],
"reactome.compound":[
"379744",
"379751"
],
"sabiork":[
"3856"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12227"
]
}
},
{
"id":"pphn_c",
"name":"Prephenate",
"compartment":"c",
"charge":-2,
"formula":"C10H8O6",
"notes":{
"original_bigg_ids":[
"pphn_c"
]
},
"annotation":{
"bigg.metabolite":[
"pphn"
],
"biocyc":[
"META:PREPHENATE"
],
"chebi":[
"CHEBI:8399",
"CHEBI:29934",
"CHEBI:45028",
"CHEBI:84387",
"CHEBI:57852",
"CHEBI:26257",
"CHEBI:26256",
"CHEBI:16666",
"CHEBI:14884"
],
"hmdb":[
"HMDB12283"
],
"inchi_key":[
"FPWMCUPFBRFMLH-XGAOUMNUSA-L"
],
"kegg.compound":[
"C00254"
],
"metanetx.chemical":[
"MNXM503"
],
"sabiork":[
"1995"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00219"
]
}
},
{
"id":"h2mb4p_c",
"name":"1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C5H9O8P2",
"notes":{
"original_bigg_ids":[
"h2mb4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"h2mb4p"
],
"biocyc":[
"META:HYDROXY-METHYL-BUTENYL-DIP"
],
"chebi":[
"CHEBI:10952",
"CHEBI:128753",
"CHEBI:15664",
"CHEBI:632"
],
"inchi_key":[
"MDSIZRKJVDMQOQ-GORDUTHDSA-K"
],
"kegg.compound":[
"C11811"
],
"lipidmaps":[
"LMPR01010009"
],
"metanetx.chemical":[
"MNXM606"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08615",
"cpd29213"
]
}
},
{
"id":"nicrnt_c",
"name":"Nicotinate D-ribonucleotide",
"compartment":"c",
"charge":-2,
"formula":"C11H12NO9P",
"notes":{
"original_bigg_ids":[
"nicrnt_c"
]
},
"annotation":{
"bigg.metabolite":[
"nicrnt"
],
"biocyc":[
"META:NICOTINATE_NUCLEOTIDE"
],
"chebi":[
"CHEBI:7561",
"CHEBI:25532",
"CHEBI:14652",
"CHEBI:15763",
"CHEBI:12398",
"CHEBI:14651",
"CHEBI:57502"
],
"hmdb":[
"HMDB59646"
],
"inchi_key":[
"JOUIQRNQJGXQDC-ZYUZMQFOSA-L"
],
"kegg.compound":[
"C01185"
],
"metanetx.chemical":[
"MNXM194"
],
"reactome.compound":[
"200492",
"8938083",
"197220"
],
"sabiork":[
"5427"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00873"
]
}
},
{
"id":"thmmp_c",
"name":"Thiamin monophosphate",
"compartment":"c",
"charge":-1,
"formula":"C12H16N4O4PS",
"notes":{
"original_bigg_ids":[
"thmmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"thmmp"
],
"biocyc":[
"META:THIAMINE-P"
],
"chebi":[
"CHEBI:9533",
"CHEBI:37574",
"CHEBI:15230",
"CHEBI:46189",
"CHEBI:26945",
"CHEBI:37575",
"CHEBI:15231"
],
"hmdb":[
"HMDB02666"
],
"inchi_key":[
"HZSAJDVWZRBGIF-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01081"
],
"metanetx.chemical":[
"MNXM662"
],
"sabiork":[
"1698"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00793"
]
}
},
{
"id":"3ooctdACP_c",
"name":"3-Oxooctadecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C18H33O2SR",
"notes":{
"original_bigg_ids":[
"3ooctdACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3ooctdACP"
],
"metanetx.chemical":[
"MNXM3491"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15377"
]
}
},
{
"id":"cdpglc_c",
"name":"CDP-glucose",
"compartment":"c",
"charge":-2,
"formula":"C15H23N3O16P2",
"notes":{
"original_bigg_ids":[
"cdpglc_c"
]
},
"annotation":{
"bigg.metabolite":[
"cdpglc"
],
"biocyc":[
"META:CDP-D-GLUCOSE"
],
"chebi":[
"CHEBI:3271",
"CHEBI:28942",
"CHEBI:13264",
"CHEBI:20870"
],
"hmdb":[
"HMDB03369"
],
"kegg.compound":[
"C00501"
],
"metanetx.chemical":[
"MNXM45895"
],
"sabiork":[
"3920"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00390"
]
}
},
{
"id":"atp_c",
"name":"ATP C10H12N5O13P3",
"compartment":"c",
"charge":-4,
"formula":"C10H12N5O13P3",
"notes":{
"original_bigg_ids":[
"atp_c"
]
},
"annotation":{
"bigg.metabolite":[
"atp"
],
"biocyc":[
"META:ATP"
],
"chebi":[
"CHEBI:15422",
"CHEBI:10789",
"CHEBI:10841",
"CHEBI:2359",
"CHEBI:22249",
"CHEBI:13236",
"CHEBI:237958",
"CHEBI:30616",
"CHEBI:57299",
"CHEBI:40938"
],
"hmdb":[
"HMDB00538"
],
"inchi_key":[
"ZKHQWZAMYRWXGA-KQYNXXCUSA-J"
],
"kegg.compound":[
"C00002"
],
"kegg.drug":[
"D08646"
],
"metanetx.chemical":[
"MNXM3"
],
"reactome.compound":[
"8878982",
"389573",
"8938081",
"211579",
"113593",
"113592",
"5632460",
"5696069",
"29358",
"8869363",
"6798184"
],
"sabiork":[
"34"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00002"
]
}
},
{
"id":"adcobdam_c",
"name":"Adenosyl cobyrinate diamide",
"compartment":"c",
"charge":-4,
"formula":"C55CoH68N11O15",
"notes":{
"original_bigg_ids":[
"adcobdam_c"
]
},
"annotation":{
"bigg.metabolite":[
"adcobdam"
],
"inchi_key":[
"OCNLJCZKGHKJGF-QOCQOLRHSA-N"
],
"metanetx.chemical":[
"MNXM92085"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03916"
]
}
},
{
"id":"lipidX2_c",
"name":"2,3-Bis(3-hydroxyhexadecanoyl)-beta-D-glucosaminyl 1-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C38H72NO12P",
"notes":{
"original_bigg_ids":[
"lipidX2_c"
]
},
"annotation":{
"bigg.metabolite":[
"lipidX2"
],
"sbo":"SBO:0000247"
}
},
{
"id":"xmp_c",
"name":"Xanthosine 5'-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C10H11N4O9P",
"notes":{
"original_bigg_ids":[
"xmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"xmp"
],
"biocyc":[
"META:XANTHOSINE-5-PHOSPHATE"
],
"chebi":[
"CHEBI:10938",
"CHEBI:57464",
"CHEBI:27328",
"CHEBI:15324",
"CHEBI:10067",
"CHEBI:15652"
],
"hmdb":[
"HMDB01554",
"HMDB62755"
],
"inchi_key":[
"DCTLYFZHFGENCW-UUOKFMHZSA-L"
],
"kegg.compound":[
"C00655"
],
"metanetx.chemical":[
"MNXM298"
],
"reactome.compound":[
"111584"
],
"sabiork":[
"1686"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00497"
]
}
},
{
"id":"nh4_c",
"name":"Ammonium",
"compartment":"c",
"charge":1,
"formula":"H4N",
"notes":{
"original_bigg_ids":[
"nh4_c"
]
},
"annotation":{
"bigg.metabolite":[
"nh4"
],
"biocyc":[
"META:AMMONIUM",
"META:AMMONIA"
],
"chebi":[
"CHEBI:44284",
"CHEBI:135980",
"CHEBI:22533",
"CHEBI:13406",
"CHEBI:29337",
"CHEBI:29340",
"CHEBI:13771",
"CHEBI:16134",
"CHEBI:28938",
"CHEBI:22534",
"CHEBI:13405",
"CHEBI:49783",
"CHEBI:7434",
"CHEBI:7435",
"CHEBI:44269",
"CHEBI:44404",
"CHEBI:13407"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/96667bd9-aeae-4e8f-89d3-100d0396af05",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/41e4c903-407f-49f7-bf6b-0a94d39fa3a7",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/27a89bdf-42f7-478f-91d8-e39881581096"
],
"hmdb":[
"HMDB00051",
"HMDB41827"
],
"inchi_key":[
"QGZKDVFQNNGYKY-UHFFFAOYSA-O"
],
"kegg.compound":[
"C00014",
"C01342"
],
"kegg.drug":[
"D02916",
"D02915"
],
"metanetx.chemical":[
"MNXM15"
],
"reactome.compound":[
"5693978",
"1132163",
"29382",
"76230",
"140912",
"389843",
"2022135",
"31633",
"113561"
],
"sabiork":[
"1268",
"43"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19013",
"cpd00013"
]
}
},
{
"id":"2pg_c",
"name":"D-Glycerate 2-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C3H4O7P",
"notes":{
"original_bigg_ids":[
"2pg_c"
]
},
"annotation":{
"bigg.metabolite":[
"2pg"
],
"biocyc":[
"META:2-PG"
],
"chebi":[
"CHEBI:39868",
"CHEBI:21028",
"CHEBI:58289",
"CHEBI:24344",
"CHEBI:12986",
"CHEBI:17835",
"CHEBI:11651",
"CHEBI:1267",
"CHEBI:88350"
],
"hmdb":[
"HMDB00362",
"HMDB62707",
"HMDB03391"
],
"inchi_key":[
"GXIURPTVHJPJLF-UWTATZPHSA-K"
],
"kegg.compound":[
"C00631"
],
"metanetx.chemical":[
"MNXM275"
],
"reactome.compound":[
"30485"
],
"sabiork":[
"31"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00482"
]
}
},
{
"id":"co2dam_c",
"name":"Cob(II)yrinate a,c diamide",
"compartment":"c",
"charge":-4,
"formula":"C45CoH56N6O12",
"notes":{
"original_bigg_ids":[
"co2dam_c"
]
},
"annotation":{
"bigg.metabolite":[
"co2dam"
],
"biocyc":[
"META:CPD-689"
],
"chebi":[
"CHEBI:3787",
"CHEBI:23331",
"CHEBI:58537",
"CHEBI:85464",
"CHEBI:27937"
],
"inchi_key":[
"IADMSJRJSGLGJI-OKJGWHJPSA-H"
],
"kegg.compound":[
"C06504"
],
"metanetx.chemical":[
"MNXM91520"
],
"sabiork":[
"20066"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pppg9_c",
"name":"Protoporphyrinogen IX",
"compartment":"c",
"charge":-2,
"formula":"C34H38N4O4",
"notes":{
"original_bigg_ids":[
"pppg9_c"
]
},
"annotation":{
"bigg.metabolite":[
"pppg9"
],
"biocyc":[
"META:PROTOPORPHYRINOGEN"
],
"chebi":[
"CHEBI:57307",
"CHEBI:26360",
"CHEBI:26359",
"CHEBI:15435",
"CHEBI:8593",
"CHEBI:14962"
],
"hmdb":[
"HMDB01097"
],
"inchi_key":[
"UHSGPDMIQQYNAX-UHFFFAOYSA-L"
],
"kegg.compound":[
"C01079"
],
"metanetx.chemical":[
"MNXM351"
],
"reactome.compound":[
"189478"
],
"sabiork":[
"5384"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00791"
]
}
},
{
"id":"hom__L_c",
"name":"L-Homoserine",
"compartment":"c",
"charge":0,
"formula":"C4H9NO3",
"notes":{
"original_bigg_ids":[
"hom__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"hom__L"
],
"biocyc":[
"META:HOMO-SER"
],
"chebi":[
"CHEBI:57476",
"CHEBI:6246",
"CHEBI:21330",
"CHEBI:43131",
"CHEBI:15699",
"CHEBI:13123"
],
"hmdb":[
"HMDB00719"
],
"inchi_key":[
"UKAUYVFTDYCKQA-VKHMYHEASA-N"
],
"kegg.compound":[
"C00263"
],
"metanetx.chemical":[
"MNXM353"
],
"sabiork":[
"2001"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00227"
]
}
},
{
"id":"uagmda_c",
"name":"Undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine",
"compartment":"c",
"charge":-4,
"formula":"C87H139N7O23P2",
"notes":{
"original_bigg_ids":[
"uagmda_c"
]
},
"annotation":{
"bigg.metabolite":[
"uagmda"
],
"biocyc":[
"META:C5"
],
"chebi":[
"CHEBI:61387",
"CHEBI:61543"
],
"inchi_key":[
"PNWZQTONLRRPST-KLDRQJOASA-J"
],
"kegg.compound":[
"C05897"
],
"kegg.glycan":[
"G10556"
],
"metanetx.chemical":[
"MNXM2264"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03494"
]
}
},
{
"id":"acser_c",
"name":"O-Acetyl-L-serine",
"compartment":"c",
"charge":0,
"formula":"C5H9NO4",
"notes":{
"original_bigg_ids":[
"acser_c"
]
},
"annotation":{
"bigg.metabolite":[
"acser"
],
"biocyc":[
"META:ACETYLSERINE"
],
"chebi":[
"CHEBI:44568",
"CHEBI:58340",
"CHEBI:7668",
"CHEBI:21938",
"CHEBI:12724",
"CHEBI:17981",
"CHEBI:12710",
"CHEBI:12685"
],
"hmdb":[
"HMDB03011"
],
"inchi_key":[
"VZXPDPZARILFQX-BYPYZUCNSA-N"
],
"kegg.compound":[
"C00979"
],
"metanetx.chemical":[
"MNXM418"
],
"reactome.compound":[
"936709"
],
"sabiork":[
"2202"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00722"
]
}
},
{
"id":"pre5_c",
"name":"Precorrin 5",
"compartment":"c",
"charge":-8,
"formula":"C45H46N4O17",
"notes":{
"original_bigg_ids":[
"pre5_c"
]
},
"annotation":{
"bigg.metabolite":[
"pre5"
],
"biocyc":[
"META:CPD-662"
],
"chebi":[
"CHEBI:58518",
"CHEBI:14874",
"CHEBI:27630",
"CHEBI:26224",
"CHEBI:77871",
"CHEBI:8374"
],
"inchi_key":[
"OUPXZNRNMLYOGK-FNFWWFRLSA-G"
],
"kegg.compound":[
"C06416"
],
"metanetx.chemical":[
"MNXM1588"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03839"
]
}
},
{
"id":"fdxox_c",
"name":"Oxidized ferredoxin",
"compartment":"c",
"charge":3,
"formula":"R",
"notes":{
"original_bigg_ids":[
"fdxox_c"
]
},
"annotation":{
"bigg.metabolite":[
"fdxox"
],
"biocyc":[
"META:Oxidized-ferredoxins"
],
"chebi":[
"CHEBI:7836",
"CHEBI:14717",
"CHEBI:17908"
],
"kegg.compound":[
"C00139"
],
"metanetx.chemical":[
"MNXM178"
],
"sabiork":[
"1944"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11621"
]
}
},
{
"id":"met__L_c",
"name":"L-Methionine",
"compartment":"c",
"charge":0,
"formula":"C5H11NO2S",
"notes":{
"original_bigg_ids":[
"met__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"met__L"
],
"biocyc":[
"META:MET"
],
"chebi":[
"CHEBI:32644",
"CHEBI:32631",
"CHEBI:21360",
"CHEBI:6271",
"CHEBI:14590",
"CHEBI:16811",
"CHEBI:25229",
"CHEBI:32632",
"CHEBI:6829",
"CHEBI:57844",
"CHEBI:32646",
"CHEBI:64558",
"CHEBI:16643",
"CHEBI:13141",
"CHEBI:43990"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/44a61812-39ff-48f9-bf09-8398e8723d5e"
],
"hmdb":[
"HMDB00696",
"HMDB33951"
],
"inchi_key":[
"FFEARJCKVFRZRR-BYPYZUCNSA-N"
],
"kegg.compound":[
"C01733",
"C00073"
],
"kegg.drug":[
"D04984",
"D04983",
"D00019"
],
"metanetx.chemical":[
"MNXM61"
],
"reactome.compound":[
"379705",
"1130765",
"174390"
],
"sabiork":[
"77",
"2315"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00060",
"cpd30746"
]
}
},
{
"id":"orn_c",
"name":"Ornithine",
"compartment":"c",
"charge":1,
"formula":"C5H13N2O2",
"notes":{
"original_bigg_ids":[
"orn_c"
]
},
"annotation":{
"bigg.metabolite":[
"orn"
],
"biocyc":[
"META:L-ORNITHINE"
],
"chebi":[
"CHEBI:21367",
"CHEBI:44667",
"CHEBI:46912",
"CHEBI:11448",
"CHEBI:7784",
"CHEBI:46913",
"CHEBI:19370",
"CHEBI:13148",
"CHEBI:15729",
"CHEBI:32964",
"CHEBI:6280",
"CHEBI:46911",
"CHEBI:46914",
"CHEBI:18257"
],
"hmdb":[
"HMDB62718",
"HMDB04984",
"HMDB00214",
"HMDB00818",
"HMDB32455",
"HMDB62654"
],
"inchi_key":[
"AHLPHDHHMVZTML-BYPYZUCNSA-O"
],
"kegg.compound":[
"C00077",
"C01602"
],
"kegg.drug":[
"D08302"
],
"lipidmaps":[
"LMFA01100057"
],
"metanetx.chemical":[
"MNXM89689"
],
"reactome.compound":[
"29498",
"113586",
"113585"
],
"sabiork":[
"1290"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00064",
"cpd19016"
]
}
},
{
"id":"phyto_c",
"name":"All-trans-Phytoene",
"compartment":"c",
"charge":0,
"formula":"C40H64",
"notes":{
"original_bigg_ids":[
"phyto_c"
]
},
"annotation":{
"bigg.metabolite":[
"phyto"
],
"metanetx.chemical":[
"MNXM148437"
],
"sbo":"SBO:0000247"
}
},
{
"id":"2ahhmd_c",
"name":"2 Amino 4 hydroxy 6 hydroxymethyl 7 8 dihydropteridine diphosphate C7H8N5O8P2",
"compartment":"c",
"charge":-3,
"formula":"C7H8N5O8P2",
"notes":{
"original_bigg_ids":[
"2ahhmd_c"
]
},
"annotation":{
"bigg.metabolite":[
"2ahhmd"
],
"inchi_key":[
"FCQGJGLSOWZZON-UHFFFAOYSA-L"
],
"metanetx.chemical":[
"MNXM91459"
],
"sabiork":[
"1834"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02920"
]
}
},
{
"id":"fdxrd_c",
"name":"Reduced ferredoxin",
"compartment":"c",
"charge":2,
"formula":"R",
"notes":{
"original_bigg_ids":[
"fdxrd_c"
]
},
"annotation":{
"bigg.metabolite":[
"fdxrd"
],
"biocyc":[
"META:Reduced-ferredoxins"
],
"chebi":[
"CHEBI:8792",
"CHEBI:17513",
"CHEBI:15024"
],
"kegg.compound":[
"C00138"
],
"metanetx.chemical":[
"MNXM169"
],
"sabiork":[
"1943"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11620"
]
}
},
{
"id":"sucbz_c",
"name":"O-Succinylbenzoate",
"compartment":"c",
"charge":-2,
"formula":"C11H8O5",
"notes":{
"original_bigg_ids":[
"sucbz_c"
]
},
"annotation":{
"bigg.metabolite":[
"sucbz"
],
"biocyc":[
"META:O-SUCCINYLBENZOATE"
],
"chebi":[
"CHEBI:44788",
"CHEBI:37026",
"CHEBI:44787",
"CHEBI:18325",
"CHEBI:12835",
"CHEBI:1278",
"CHEBI:19778"
],
"inchi_key":[
"YIVWQNVQRXFZJB-UHFFFAOYSA-L"
],
"kegg.compound":[
"C02730"
],
"metanetx.chemical":[
"MNXM1212"
],
"sabiork":[
"2510"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01772"
]
}
},
{
"id":"4hpro_LT_c",
"name":"Trans 4 Hydroxy L proline C5H9NO3",
"compartment":"c",
"charge":0,
"formula":"C5H9NO3",
"notes":{
"original_bigg_ids":[
"4hpro__LT_c"
]
},
"annotation":{
"bigg.metabolite":[
"4hpro_LT"
],
"biocyc":[
"META:4-HYDROXY-L-PROLINE",
"META:CPD-17742"
],
"chebi":[
"CHEBI:62978",
"CHEBI:43318",
"CHEBI:18095",
"CHEBI:20392",
"CHEBI:27060",
"CHEBI:27059",
"CHEBI:49360",
"CHEBI:12864",
"CHEBI:43172",
"CHEBI:10714",
"CHEBI:43210",
"CHEBI:58375",
"CHEBI:27992",
"CHEBI:43227",
"CHEBI:10713",
"CHEBI:63137"
],
"hmdb":[
"HMDB00725",
"HMDB36576"
],
"inchi_key":[
"PMMYEEVYMWASQN-DMTCNVIQSA-N"
],
"kegg.compound":[
"C03651",
"C01157"
],
"metanetx.chemical":[
"MNXM87584"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00851",
"cpd02291",
"cpd29317"
]
}
},
{
"id":"prpp_c",
"name":"5-Phospho-alpha-D-ribose 1-diphosphate",
"compartment":"c",
"charge":-5,
"formula":"C5H8O14P3",
"notes":{
"original_bigg_ids":[
"prpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"prpp"
],
"biocyc":[
"META:PRPP"
],
"chebi":[
"CHEBI:2121",
"CHEBI:20625",
"CHEBI:12160",
"CHEBI:45139",
"CHEBI:12159",
"CHEBI:17111",
"CHEBI:58017"
],
"hmdb":[
"HMDB00280",
"HMDB62643"
],
"inchi_key":[
"PQGCEDQWHSBAJP-TXICZTDVSA-I"
],
"kegg.compound":[
"C00119"
],
"metanetx.chemical":[
"MNXM91"
],
"reactome.compound":[
"73566"
],
"sabiork":[
"1305"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00103"
]
}
},
{
"id":"pre6b_c",
"name":"Precorrin 6B",
"compartment":"c",
"charge":-6,
"formula":"C44H50N4O16",
"notes":{
"original_bigg_ids":[
"pre6b_c"
]
},
"annotation":{
"bigg.metabolite":[
"pre6b"
],
"biocyc":[
"META:CPD-679"
],
"chebi":[
"CHEBI:14876",
"CHEBI:8376",
"CHEBI:58532",
"CHEBI:26226",
"CHEBI:27858"
],
"inchi_key":[
"NWRSYSRVTYBWJV-WFECKALKSA-H"
],
"kegg.compound":[
"C06319"
],
"metanetx.chemical":[
"MNXM1497"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03760"
]
}
},
{
"id":"1p3h5c_c",
"name":"L 1 Pyrroline 3 hydroxy 5 carboxylate C5H6NO3",
"compartment":"c",
"charge":-1,
"formula":"C5H6NO3",
"notes":{
"original_bigg_ids":[
"1p3h5c_c"
]
},
"annotation":{
"bigg.metabolite":[
"1p3h5c"
],
"biocyc":[
"META:PYRROLINE-HYDROXY-CARBOXYLATE"
],
"chebi":[
"CHEBI:6151",
"CHEBI:62612"
],
"hmdb":[
"HMDB62585"
],
"inchi_key":[
"WFOFKRKDDKGRIK-DMTCNVIQSA-M"
],
"kegg.compound":[
"C04281"
],
"metanetx.chemical":[
"MNXM114091"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02625"
]
}
},
{
"id":"gln__L_c",
"name":"L-Glutamine",
"compartment":"c",
"charge":0,
"formula":"C5H10N2O3",
"notes":{
"original_bigg_ids":[
"gln__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"gln__L"
],
"biocyc":[
"META:GLN"
],
"chebi":[
"CHEBI:42943",
"CHEBI:42899",
"CHEBI:32679",
"CHEBI:32678",
"CHEBI:58359",
"CHEBI:28300",
"CHEBI:42812",
"CHEBI:13110",
"CHEBI:18050",
"CHEBI:32666",
"CHEBI:6227",
"CHEBI:32665",
"CHEBI:21308",
"CHEBI:42814",
"CHEBI:5432",
"CHEBI:24316"
],
"hmdb":[
"HMDB00641"
],
"inchi_key":[
"ZDXPYRJPNDTMRX-VKHMYHEASA-N"
],
"kegg.compound":[
"C00064",
"C00303"
],
"kegg.drug":[
"D00015"
],
"metanetx.chemical":[
"MNXM37"
],
"reactome.compound":[
"113522",
"212615",
"29472"
],
"sabiork":[
"2011",
"74"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00253",
"cpd00053"
]
}
},
{
"id":"5aizc_c",
"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate",
"compartment":"c",
"charge":-3,
"formula":"C9H11N3O9P",
"notes":{
"original_bigg_ids":[
"5aizc_c"
]
},
"annotation":{
"bigg.metabolite":[
"5aizc"
],
"biocyc":[
"META:PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE"
],
"chebi":[
"CHEBI:77657",
"CHEBI:12103",
"CHEBI:575",
"CHEBI:18968",
"CHEBI:58564",
"CHEBI:28413",
"CHEBI:41336"
],
"hmdb":[
"HMDB06273",
"HMDB62424"
],
"inchi_key":[
"XFVULMDJZXYMSG-ZIYNGMLESA-L"
],
"kegg.compound":[
"C04751"
],
"metanetx.chemical":[
"MNXM507"
],
"reactome.compound":[
"111395"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02893"
]
}
},
{
"id":"3ohexACP_c",
"name":"3-Oxohexanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C6H9O2SR",
"notes":{
"original_bigg_ids":[
"3ohexACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3ohexACP"
],
"biocyc":[
"META:3-oxo-hexanoyl-ACPs"
],
"chebi":[
"CHEBI:1642"
],
"kegg.compound":[
"C05746"
],
"lipidmaps":[
"LMFA07060005"
],
"metanetx.chemical":[
"MNXM25602"
],
"sabiork":[
"8106"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11486"
]
}
},
{
"id":"hemeO_c",
"name":"Heme O C49H56FeN4O5",
"compartment":"c",
"charge":-2,
"formula":"C49FeH56N4O5",
"notes":{
"original_bigg_ids":[
"hemeO_c"
]
},
"annotation":{
"bigg.metabolite":[
"hemeO"
],
"biocyc":[
"META:CPD-17063",
"META:HEME_O"
],
"chebi":[
"CHEBI:24480",
"CHEBI:61719",
"CHEBI:36301",
"CHEBI:60530"
],
"hmdb":[
"HMDB01162"
],
"inchi_key":[
"FISPASSVCDRERW-ARQJTVBPSA-J"
],
"kegg.compound":[
"C15672"
],
"metanetx.chemical":[
"MNXM1278"
],
"reactome.compound":[
"2995328"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11313"
]
}
},
{
"id":"3pg_c",
"name":"3-Phospho-D-glycerate",
"compartment":"c",
"charge":-3,
"formula":"C3H4O7P",
"notes":{
"original_bigg_ids":[
"3pg_c"
]
},
"annotation":{
"bigg.metabolite":[
"3pg"
],
"biocyc":[
"META:G3P"
],
"chebi":[
"CHEBI:11879",
"CHEBI:11880",
"CHEBI:17794",
"CHEBI:21029",
"CHEBI:1657",
"CHEBI:58272",
"CHEBI:12987"
],
"hmdb":[
"HMDB60180"
],
"inchi_key":[
"OSJPPGNTCRNQQC-UWTATZPHSA-K"
],
"kegg.compound":[
"C00197"
],
"metanetx.chemical":[
"MNXM126"
],
"reactome.compound":[
"6799493",
"29728"
],
"sabiork":[
"21216"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00169"
]
}
},
{
"id":"dtdp4d6dm_c",
"name":"DTDP-4-dehydro-6-deoxy-L-mannose",
"compartment":"c",
"charge":-2,
"formula":"C16H22N2O15P2",
"notes":{
"original_bigg_ids":[
"dtdp4d6dm_c"
]
},
"annotation":{
"bigg.metabolite":[
"dtdp4d6dm"
],
"biocyc":[
"META:DTDP-DEOH-DEOXY-MANNOSE"
],
"chebi":[
"CHEBI:10511",
"CHEBI:15744",
"CHEBI:14082",
"CHEBI:45868",
"CHEBI:23543",
"CHEBI:57494",
"CHEBI:62830"
],
"inchi_key":[
"PSXWNITXWWECNY-LPVGZGSHSA-L"
],
"kegg.compound":[
"C00688"
],
"metanetx.chemical":[
"MNXM2371"
],
"sabiork":[
"1564"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08300",
"cpd00522"
]
}
},
{
"id":"lgt__S_c",
"name":"(R)-S-Lactoylglutathione",
"compartment":"c",
"charge":-1,
"formula":"C13H20N3O8S",
"notes":{
"original_bigg_ids":[
"lgt__S_c"
]
},
"annotation":{
"bigg.metabolite":[
"lgt__S"
],
"biocyc":[
"META:S-LACTOYL-GLUTATHIONE"
],
"chebi":[
"CHEBI:57474",
"CHEBI:355",
"CHEBI:18678",
"CHEBI:11014",
"CHEBI:15694"
],
"hmdb":[
"HMDB01066",
"HMDB62624"
],
"inchi_key":[
"VDYDCVUWILIYQF-CSMHCCOUSA-M"
],
"kegg.compound":[
"C03451"
],
"metanetx.chemical":[
"MNXM1253"
],
"reactome.compound":[
"5694130"
],
"sabiork":[
"24624",
"3008"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02182"
]
}
},
{
"id":"but2eACP_c",
"name":"But-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C4H5OSR",
"notes":{
"original_bigg_ids":[
"but2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"but2eACP"
],
"kegg.compound":[
"C04246"
],
"metanetx.chemical":[
"MNXM3229"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11465"
]
}
},
{
"id":"pheme_c",
"name":"Protoheme C34H30FeN4O4",
"compartment":"c",
"charge":-2,
"formula":"C34H30FeN4O4",
"notes":{
"original_bigg_ids":[
"pheme_c"
]
},
"annotation":{
"bigg.metabolite":[
"pheme"
],
"biocyc":[
"META:PROTOHEME"
],
"chebi":[
"CHEBI:60344",
"CHEBI:26355",
"CHEBI:17627",
"CHEBI:5651",
"CHEBI:14957"
],
"inchi_key":[
"KABFMIBPWCXCRK-RGGAHWMASA-J"
],
"kegg.compound":[
"C00032"
],
"metanetx.chemical":[
"MNXM249"
],
"reactome.compound":[
"917877",
"71185",
"189444"
],
"sbo":"SBO:0000247"
}
},
{
"id":"h2o_u",
"name":"H2O H2O",
"compartment":"u",
"charge":0,
"formula":"H2O",
"notes":{
"original_bigg_ids":[
"h2o_u"
]
},
"annotation":{
"bigg.metabolite":[
"h2o"
],
"biocyc":[
"META:CPD-15815",
"META:OXONIUM",
"META:HYDROXYL-GROUP",
"META:WATER",
"META:OH"
],
"chebi":[
"CHEBI:13352",
"CHEBI:30490",
"CHEBI:43228",
"CHEBI:33813",
"CHEBI:44292",
"CHEBI:44641",
"CHEBI:27313",
"CHEBI:42043",
"CHEBI:44819",
"CHEBI:29356",
"CHEBI:5594",
"CHEBI:10743",
"CHEBI:15377",
"CHEBI:42857",
"CHEBI:13365",
"CHEBI:29412",
"CHEBI:16234",
"CHEBI:13419",
"CHEBI:5585",
"CHEBI:44701"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/799908db-b8c9-4982-86cb-1f225e2ad08c",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/e7f34a8e-cded-4793-b6d5-792335b38636",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/969d0227-3069-4e44-9525-7ae7bad84170"
],
"hmdb":[
"HMDB02111",
"HMDB01039"
],
"inchi_key":[
"XLYOFNOQVPJJNP-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00001",
"C01328"
],
"kegg.drug":[
"D00001",
"D06322"
],
"metanetx.chemical":[
"MNXM2"
],
"reactome.compound":[
"113521",
"141343",
"2022884",
"5278291",
"29356",
"189422",
"5668574",
"5693747",
"109276",
"113519",
"1605715",
"8851517",
"113518",
"351603"
],
"sabiork":[
"40"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27222",
"cpd00001",
"cpd15275"
]
}
},
{
"id":"methf_c",
"name":"5,10-Methenyltetrahydrofolate",
"compartment":"c",
"charge":-1,
"formula":"C20H20N7O6",
"notes":{
"original_bigg_ids":[
"methf_c"
]
},
"annotation":{
"bigg.metabolite":[
"methf"
],
"biocyc":[
"META:5-10-METHENYL-THF"
],
"chebi":[
"CHEBI:12069",
"CHEBI:15638",
"CHEBI:12068",
"CHEBI:57455",
"CHEBI:1987"
],
"hmdb":[
"HMDB01354",
"HMDB62623"
],
"inchi_key":[
"MEANFMOQMXYMCT-OLZOCXBDSA-M"
],
"kegg.compound":[
"C00445"
],
"metanetx.chemical":[
"MNXM511"
],
"reactome.compound":[
"6801458"
],
"sabiork":[
"1338"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00347"
]
}
},
{
"id":"chlld_c",
"name":"Chlorophyllide a",
"compartment":"c",
"charge":-1,
"formula":"C35H33MgN4O5",
"notes":{
"original_bigg_ids":[
"chlda_c"
]
},
"annotation":{
"bigg.metabolite":[
"chlld"
],
"biocyc":[
"META:CHLOROPHYLLIDE-A"
],
"chebi":[
"CHEBI:13976",
"CHEBI:23159",
"CHEBI:57942",
"CHEBI:16900",
"CHEBI:3633",
"CHEBI:13977",
"CHEBI:83348"
],
"inchi_key":[
"IZOAGQOHKWGYKF-PVMVIUQGSA-K"
],
"metanetx.chemical":[
"MNXM631"
],
"sbo":"SBO:0000247"
}
},
{
"id":"adcobhex_c",
"name":"Adenosyl-cobyric acid",
"compartment":"c",
"charge":0,
"formula":"C55CoH76N15O11",
"notes":{
"original_bigg_ids":[
"adcobhex_c"
]
},
"annotation":{
"bigg.metabolite":[
"adcobhex"
],
"biocyc":[
"META:CPD-691"
],
"chebi":[
"CHEBI:2483",
"CHEBI:58504"
],
"inchi_key":[
"AXZSUSWNAXMBBB-NQYRMHKHSA-L"
],
"kegg.compound":[
"C06507"
],
"metanetx.chemical":[
"MNXM877"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03917"
]
}
},
{
"id":"h_u",
"name":"H+",
"compartment":"u",
"charge":1,
"formula":"H",
"notes":{
"original_bigg_ids":[
"h_u"
]
},
"annotation":{
"bigg.metabolite":[
"h"
],
"biocyc":[
"META:PROTON"
],
"chebi":[
"CHEBI:5584",
"CHEBI:13357",
"CHEBI:15378",
"CHEBI:10744"
],
"hmdb":[
"HMDB59597"
],
"inchi_key":[
"GPRLSGONYQIRFK-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00080"
],
"metanetx.chemical":[
"MNXM1"
],
"reactome.compound":[
"2000349",
"425978",
"74722",
"428040",
"427899",
"428548",
"156540",
"70106",
"425969",
"1132304",
"5668577",
"1470067",
"163953",
"193465",
"113529",
"351626",
"425999",
"194688",
"374900",
"2872447",
"372511"
],
"sabiork":[
"39"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00067"
]
}
},
{
"id":"co1dam_c",
"name":"Cob(I)yrinate a,c diamide",
"compartment":"c",
"charge":-5,
"formula":"C45H56CoN6O12",
"notes":{
"original_bigg_ids":[
"co1dam_c"
]
},
"annotation":{
"bigg.metabolite":[
"co1dam"
],
"biocyc":[
"META:CPD-694"
],
"chebi":[
"CHEBI:3785",
"CHEBI:58575",
"CHEBI:28531",
"CHEBI:85469",
"CHEBI:23329"
],
"hmdb":[
"HMDB06904",
"HMDB06965"
],
"inchi_key":[
"NKLHEMWEQJCPPF-OKJGWHJPSA-H"
],
"kegg.compound":[
"C06505"
],
"metanetx.chemical":[
"MNXM92189"
],
"sbo":"SBO:0000247"
}
},
{
"id":"co_c",
"name":"Carbon monoxide",
"compartment":"c",
"charge":0,
"formula":"CO",
"notes":{
"original_bigg_ids":[
"co_c"
]
},
"annotation":{
"bigg.metabolite":[
"co"
],
"biocyc":[
"META:CARBON-MONOXIDE"
],
"chebi":[
"CHEBI:23013",
"CHEBI:17245",
"CHEBI:3282",
"CHEBI:41526",
"CHEBI:58072",
"CHEBI:13281"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/a0a5ff93-8a43-48da-aab5-cef2c628da42"
],
"hmdb":[
"HMDB01361"
],
"inchi_key":[
"UGFAIRIUMAVXCW-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00237"
],
"kegg.drug":[
"D03398",
"D09706"
],
"metanetx.chemical":[
"MNXM10881"
],
"reactome.compound":[
"189385"
],
"sabiork":[
"1987"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00204"
]
}
},
{
"id":"mppp9me_c",
"name":"Magnesium protoporphyrin IX monomethyl ester",
"compartment":"c",
"charge":-1,
"formula":"C35H33MgN4O4",
"notes":{
"original_bigg_ids":[
"mppp9me_c"
]
},
"annotation":{
"bigg.metabolite":[
"mppp9me"
],
"metanetx.chemical":[
"MNXM148334"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30403"
]
}
},
{
"id":"bm_dna_c",
"name":"DNA component of biomass",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"bm_dna_c"
]
},
"annotation":{
"bigg.metabolite":[
"bm_dna"
],
"sbo":"SBO:0000247"
}
},
{
"id":"gly_c",
"name":"Glycine",
"compartment":"c",
"charge":0,
"formula":"C2H5NO2",
"notes":{
"original_bigg_ids":[
"gly_c"
]
},
"annotation":{
"bigg.metabolite":[
"gly"
],
"biocyc":[
"META:GLY"
],
"chebi":[
"CHEBI:32508",
"CHEBI:32507",
"CHEBI:15428",
"CHEBI:42964",
"CHEBI:14344",
"CHEBI:24368",
"CHEBI:10792",
"CHEBI:5460",
"CHEBI:57305"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/19441357-44af-48e1-b5ac-0e48c8dcbb87",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/870d7ca5-6659-40eb-8b5d-858bd29cddaa"
],
"hmdb":[
"HMDB00123"
],
"inchi_key":[
"DHMQDGOQFOQNFH-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00037"
],
"kegg.drug":[
"D00011"
],
"metanetx.chemical":[
"MNXM29"
],
"reactome.compound":[
"29424",
"193446",
"113545",
"159549",
"266029"
],
"sabiork":[
"66"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00033"
]
}
},
{
"id":"uppg3_c",
"name":"Uroporphyrinogen III",
"compartment":"c",
"charge":-8,
"formula":"C40H36N4O16",
"notes":{
"original_bigg_ids":[
"uppg3_c"
]
},
"annotation":{
"bigg.metabolite":[
"uppg3"
],
"biocyc":[
"META:UROPORPHYRINOGEN-III"
],
"chebi":[
"CHEBI:15437",
"CHEBI:15300",
"CHEBI:9905",
"CHEBI:27257",
"CHEBI:57308"
],
"hmdb":[
"HMDB01086"
],
"inchi_key":[
"HUHWZXWWOFSFKF-UHFFFAOYSA-F"
],
"kegg.compound":[
"C01051"
],
"metanetx.chemical":[
"MNXM414"
],
"reactome.compound":[
"189407"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00774"
]
}
},
{
"id":"sbzcoa_c",
"name":"O-Succinylbenzoyl-CoA",
"compartment":"c",
"charge":-5,
"formula":"C32H39N7O20P3S",
"notes":{
"original_bigg_ids":[
"sbzcoa_c"
]
},
"annotation":{
"bigg.metabolite":[
"sbzcoa"
],
"biocyc":[
"META:CPD-6972"
],
"chebi":[
"CHEBI:15509",
"CHEBI:12700",
"CHEBI:57364",
"CHEBI:12836",
"CHEBI:19779",
"CHEBI:1279"
],
"inchi_key":[
"AVOVYFCDODUXLY-HSJNEKGZSA-I"
],
"kegg.compound":[
"C03160"
],
"metanetx.chemical":[
"MNXM1132"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02021"
]
}
},
{
"id":"dtdp_c",
"name":"DTDP C10H13N2O11P2",
"compartment":"c",
"charge":-3,
"formula":"C10H13N2O11P2",
"notes":{
"original_bigg_ids":[
"dtdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dtdp"
],
"biocyc":[
"META:TDP"
],
"chebi":[
"CHEBI:58369",
"CHEBI:26998",
"CHEBI:14077",
"CHEBI:10500",
"CHEBI:18075",
"CHEBI:46061"
],
"hmdb":[
"HMDB01274"
],
"inchi_key":[
"UJLXYODCHAELLY-XLPZGREQSA-K"
],
"kegg.compound":[
"C00363"
],
"metanetx.chemical":[
"MNXM152"
],
"sabiork":[
"1333"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00297"
]
}
},
{
"id":"fe3_c",
"name":"Iron (Fe3+)",
"compartment":"c",
"charge":3,
"formula":"Fe",
"notes":{
"original_bigg_ids":[
"fe3_c"
]
},
"annotation":{
"bigg.metabolite":[
"fe3"
],
"biocyc":[
"META:FE+3"
],
"chebi":[
"CHEBI:49595",
"CHEBI:13320",
"CHEBI:24877",
"CHEBI:21130",
"CHEBI:29034",
"CHEBI:34755"
],
"hmdb":[
"HMDB12943"
],
"inchi_key":[
"VTLYFUHAOXGGBS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C14819"
],
"metanetx.chemical":[
"MNXM196"
],
"reactome.compound":[
"917966",
"111736",
"917943",
"912519",
"912516"
],
"sabiork":[
"1361"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd10516"
]
}
},
{
"id":"uamr_c",
"name":"UDP-N-acetylmuramate",
"compartment":"c",
"charge":-3,
"formula":"C20H28N3O19P2",
"notes":{
"original_bigg_ids":[
"uamr_c"
]
},
"annotation":{
"bigg.metabolite":[
"uamr"
],
"biocyc":[
"META:UDP-N-ACETYLMURAMATE"
],
"chebi":[
"CHEBI:70757",
"CHEBI:9827",
"CHEBI:22120",
"CHEBI:58309",
"CHEBI:13477",
"CHEBI:70765",
"CHEBI:13458",
"CHEBI:17882"
],
"inchi_key":[
"NQBRVZNDBBMBLJ-MQTLHLSBSA-K"
],
"kegg.compound":[
"C01050"
],
"metanetx.chemical":[
"MNXM722733"
],
"sabiork":[
"2230"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00773"
]
}
},
{
"id":"e4p_c",
"name":"D-Erythrose 4-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C4H7O7P",
"notes":{
"original_bigg_ids":[
"e4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"e4p"
],
"biocyc":[
"META:ERYTHROSE-4P"
],
"chebi":[
"CHEBI:4114",
"CHEBI:20927",
"CHEBI:12921",
"CHEBI:48153",
"CHEBI:16897",
"CHEBI:42349"
],
"hmdb":[
"HMDB01321"
],
"inchi_key":[
"NGHMDNPXVRFFGS-IUYQGCFVSA-L"
],
"kegg.compound":[
"C00279"
],
"metanetx.chemical":[
"MNXM258"
],
"reactome.compound":[
"29878"
],
"sabiork":[
"1324"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00236"
]
}
},
{
"id":"trp__L_c",
"name":"L-Tryptophan",
"compartment":"c",
"charge":0,
"formula":"C11H12N2O2",
"notes":{
"original_bigg_ids":[
"trp__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"trp__L"
],
"biocyc":[
"META:TRP"
],
"chebi":[
"CHEBI:13178",
"CHEBI:27163",
"CHEBI:6310",
"CHEBI:9769",
"CHEBI:32728",
"CHEBI:16828",
"CHEBI:27897",
"CHEBI:21407",
"CHEBI:64554",
"CHEBI:46125",
"CHEBI:57912",
"CHEBI:32704",
"CHEBI:46086",
"CHEBI:45988",
"CHEBI:184633",
"CHEBI:46225",
"CHEBI:32727",
"CHEBI:32702"
],
"hmdb":[
"HMDB00929",
"HMDB30396"
],
"inchi_key":[
"QIVBCDIJIAJPQS-VIFPVBQESA-N"
],
"kegg.compound":[
"C00806",
"C00078"
],
"kegg.drug":[
"D00020"
],
"metanetx.chemical":[
"MNXM94"
],
"reactome.compound":[
"379709",
"352006",
"29500"
],
"sabiork":[
"2164",
"85"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19007",
"cpd00065"
]
}
},
{
"id":"zn2_c",
"name":"Zinc",
"compartment":"c",
"charge":2,
"formula":"Zn",
"notes":{
"original_bigg_ids":[
"zn2_c"
]
},
"annotation":{
"bigg.metabolite":[
"zn2"
],
"biocyc":[
"META:ZN+2"
],
"chebi":[
"CHEBI:49982",
"CHEBI:49972",
"CHEBI:29105",
"CHEBI:27368",
"CHEBI:10113"
],
"hmdb":[
"HMDB01303"
],
"inchi_key":[
"PTFCDOFLOPIGGS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00038"
],
"metanetx.chemical":[
"MNXM149"
],
"reactome.compound":[
"216667",
"437093",
"29426",
"216785",
"435350",
"442320",
"158417"
],
"sabiork":[
"1281"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00034"
]
}
},
{
"id":"accoa_c",
"name":"Acetyl-CoA",
"compartment":"c",
"charge":-4,
"formula":"C23H34N7O17P3S",
"notes":{
"original_bigg_ids":[
"accoa_c"
]
},
"annotation":{
"bigg.metabolite":[
"accoa"
],
"biocyc":[
"META:ACETYL-COA"
],
"chebi":[
"CHEBI:57288",
"CHEBI:22192",
"CHEBI:15351",
"CHEBI:13712",
"CHEBI:2408",
"CHEBI:40470"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/57bd5e24-9d14-4b91-bc60-64c8ea6c2d11"
],
"hmdb":[
"HMDB01206"
],
"inchi_key":[
"ZSLZBFCDCINBPY-ZSJPKINUSA-J"
],
"kegg.compound":[
"C00024"
],
"lipidmaps":[
"LMFA07050029",
"LMFA07050281"
],
"metanetx.chemical":[
"MNXM21"
],
"reactome.compound":[
"727753",
"76183",
"113560",
"353123",
"113559"
],
"sabiork":[
"1276"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00022"
],
"slm":[
"000000297"
]
}
},
{
"id":"hexACP_c",
"name":"Hexanoyl-ACP (n-C6:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C6H11OSR",
"notes":{
"original_bigg_ids":[
"hexACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"hexACP"
],
"metanetx.chemical":[
"MNXM90722"
],
"sbo":"SBO:0000247"
}
},
{
"id":"prephytedp_c",
"name":"Prephytoene diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C40H65O7P2",
"notes":{
"original_bigg_ids":[
"prephytedp_c"
]
},
"annotation":{
"bigg.metabolite":[
"prephytedp"
],
"biocyc":[
"META:CPD-464"
],
"chebi":[
"CHEBI:17090",
"CHEBI:14885",
"CHEBI:58011",
"CHEBI:26260",
"CHEBI:8400"
],
"hmdb":[
"HMDB03023"
],
"inchi_key":[
"RVCNKTPCHZNAAO-UZDKSQMHSA-K"
],
"kegg.compound":[
"C03427"
],
"lipidmaps":[
"LMPR01070253"
],
"metanetx.chemical":[
"MNXM1788"
],
"sabiork":[
"1746"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02168"
]
}
},
{
"id":"udcpdp_c",
"name":"Undecaprenyl diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C55H89O7P2",
"notes":{
"original_bigg_ids":[
"udcpdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"udcpdp"
],
"biocyc":[
"META:CPD-9649"
],
"chebi":[
"CHEBI:27192",
"CHEBI:53042",
"CHEBI:17047",
"CHEBI:9863",
"CHEBI:57995",
"CHEBI:15284"
],
"hmdb":[
"HMDB01469"
],
"inchi_key":[
"NTXGVHCCXVHYCL-RDQGWRCRSA-K"
],
"lipidmaps":[
"LMPR03030004"
],
"metanetx.chemical":[
"MNXM5043"
],
"sabiork":[
"1757"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd25775"
]
}
},
{
"id":"asn__L_c",
"name":"L-Asparagine",
"compartment":"c",
"charge":0,
"formula":"C4H8N2O3",
"notes":{
"original_bigg_ids":[
"asn__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"asn__L"
],
"biocyc":[
"META:ASN"
],
"chebi":[
"CHEBI:6191",
"CHEBI:22653",
"CHEBI:32651",
"CHEBI:58048",
"CHEBI:40902",
"CHEBI:21242",
"CHEBI:32661",
"CHEBI:13083",
"CHEBI:17196",
"CHEBI:32660",
"CHEBI:32650"
],
"hmdb":[
"HMDB00168"
],
"inchi_key":[
"DCXYFEDJOCDNAF-REOHCLBHSA-N"
],
"kegg.compound":[
"C16438",
"C00152"
],
"metanetx.chemical":[
"MNXM147"
],
"reactome.compound":[
"29642",
"379703"
],
"sabiork":[
"21052",
"72"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00132",
"cpd15142"
]
}
},
{
"id":"lipidAds2_c",
"name":"Lipid A Disaccharide (cyanobacterial)",
"compartment":"c",
"charge":-2,
"formula":"C76H143N2O20P",
"notes":{
"original_bigg_ids":[
"lipidAds2_c"
]
},
"annotation":{
"bigg.metabolite":[
"lipidAds2"
],
"sbo":"SBO:0000247"
}
},
{
"id":"mal__L_c",
"name":"L-Malate",
"compartment":"c",
"charge":-2,
"formula":"C4H4O5",
"notes":{
"original_bigg_ids":[
"mal__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"mal__L"
],
"biocyc":[
"META:MAL"
],
"chebi":[
"CHEBI:15589",
"CHEBI:30797",
"CHEBI:423",
"CHEBI:18784",
"CHEBI:18785",
"CHEBI:13140",
"CHEBI:11066"
],
"hmdb":[
"HMDB00156"
],
"inchi_key":[
"BJEPYKJPYRNKOW-REOHCLBHSA-L"
],
"kegg.compound":[
"C00149"
],
"metanetx.chemical":[
"MNXM98"
],
"reactome.compound":[
"198498",
"113544"
],
"sabiork":[
"1918"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00130"
]
}
},
{
"id":"hpyr_c",
"name":"Hydroxypyruvate",
"compartment":"c",
"charge":-1,
"formula":"C3H3O4",
"notes":{
"original_bigg_ids":[
"hpyr_c"
]
},
"annotation":{
"bigg.metabolite":[
"hpyr"
],
"biocyc":[
"META:OH-PYR"
],
"chebi":[
"CHEBI:20083",
"CHEBI:39999",
"CHEBI:11837",
"CHEBI:30841",
"CHEBI:5813",
"CHEBI:17180",
"CHEBI:14425",
"CHEBI:20082"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/7db40782-1f6e-447d-aaf1-b17c4f9bd437",
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/15496999-93c3-48e0-a69c-8e2ca0503508"
],
"hmdb":[
"HMDB01352"
],
"inchi_key":[
"HHDDCCUIIUWNGJ-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00168"
],
"metanetx.chemical":[
"MNXM392"
],
"sabiork":[
"1959"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00145"
]
}
},
{
"id":"hcys__L_c",
"name":"L-Homocysteine",
"compartment":"c",
"charge":0,
"formula":"C4H9NO2S",
"notes":{
"original_bigg_ids":[
"hcys__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"hcys__L"
],
"biocyc":[
"META:HOMO-CYS"
],
"chebi":[
"CHEBI:43117",
"CHEBI:21329",
"CHEBI:58199",
"CHEBI:66952",
"CHEBI:6245",
"CHEBI:17588",
"CHEBI:17230",
"CHEBI:13122",
"CHEBI:14408",
"CHEBI:58065",
"CHEBI:5751",
"CHEBI:63072"
],
"hmdb":[
"HMDB00165",
"HMDB00742"
],
"inchi_key":[
"FFFHZYDWPBMWHY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C05330",
"C00155"
],
"metanetx.chemical":[
"MNXM123"
],
"reactome.compound":[
"174369"
],
"sabiork":[
"1950",
"2768"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19034",
"cpd00135"
]
}
},
{
"id":"prbatp_c",
"name":"1-(5-Phosphoribosyl)-ATP",
"compartment":"c",
"charge":-6,
"formula":"C15H19N5O20P4",
"notes":{
"original_bigg_ids":[
"prbatp_c"
]
},
"annotation":{
"bigg.metabolite":[
"prbatp"
],
"biocyc":[
"META:PHOSPHORIBOSYL-ATP"
],
"chebi":[
"CHEBI:73200",
"CHEBI:58424",
"CHEBI:11196",
"CHEBI:18263",
"CHEBI:73183",
"CHEBI:8167",
"CHEBI:18970",
"CHEBI:59460",
"CHEBI:11192"
],
"hmdb":[
"HMDB03665"
],
"inchi_key":[
"RKNHJBVBFHDXGR-KEOHHSTQSA-H"
],
"kegg.compound":[
"C02739"
],
"metanetx.chemical":[
"MNXM1351"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01775"
]
}
},
{
"id":"glu1sa_c",
"name":"L-Glutamate 1-semialdehyde",
"compartment":"c",
"charge":0,
"formula":"C5H9NO3",
"notes":{
"original_bigg_ids":[
"glu1sa_c"
]
},
"annotation":{
"bigg.metabolite":[
"glu1sa"
],
"biocyc":[
"META:GLUTAMATE-1-SEMIALDEHYDE"
],
"chebi":[
"CHEBI:24312",
"CHEBI:42823",
"CHEBI:18756",
"CHEBI:404",
"CHEBI:15757",
"CHEBI:11022",
"CHEBI:42827",
"CHEBI:57501"
],
"inchi_key":[
"MPUUQNGXJSEWTF-BYPYZUCNSA-N"
],
"kegg.compound":[
"C03741"
],
"metanetx.chemical":[
"MNXM1453"
],
"sabiork":[
"6826"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02345"
]
}
},
{
"id":"chor_c",
"name":"Chorismate",
"compartment":"c",
"charge":-2,
"formula":"C10H8O6",
"notes":{
"original_bigg_ids":[
"chor_c"
]
},
"annotation":{
"bigg.metabolite":[
"chor"
],
"biocyc":[
"META:CHORISMATE"
],
"chebi":[
"CHEBI:23225",
"CHEBI:3677",
"CHEBI:23227",
"CHEBI:17333",
"CHEBI:29748",
"CHEBI:13993"
],
"hmdb":[
"HMDB12199"
],
"inchi_key":[
"WTFXTQVDAKGDEY-HTQZYQBOSA-L"
],
"kegg.compound":[
"C00251"
],
"metanetx.chemical":[
"MNXM337"
],
"reactome.compound":[
"964856"
],
"sabiork":[
"1992"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00216"
]
}
},
{
"id":"4per_c",
"name":"4-Phospho-D-erythronate",
"compartment":"c",
"charge":-3,
"formula":"C4H6O8P",
"notes":{
"original_bigg_ids":[
"4per_c"
]
},
"annotation":{
"bigg.metabolite":[
"4per"
],
"biocyc":[
"META:ERYTHRONATE-4P"
],
"chebi":[
"CHEBI:49055",
"CHEBI:58766",
"CHEBI:41926",
"CHEBI:49003",
"CHEBI:1924"
],
"inchi_key":[
"ZCZXOHUILRHRQJ-PWNYCUMCSA-K"
],
"kegg.compound":[
"C03393"
],
"metanetx.chemical":[
"MNXM1407"
],
"sabiork":[
"6597"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02147"
]
}
},
{
"id":"ocdcaACP_c",
"name":"Octadecanoyl-ACP (n-C18:0ACP)",
"compartment":"c",
"charge":-1,
"formula":"C18H35OSR",
"notes":{
"original_bigg_ids":[
"ocdcaACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"ocdcaACP"
],
"metanetx.chemical":[
"MNXM3075"
],
"sbo":"SBO:0000247"
}
},
{
"id":"hemeA_c",
"name":"Heme A C49H55FeN4O6",
"compartment":"c",
"charge":-2,
"formula":"C49FeH54N4O6",
"notes":{
"original_bigg_ids":[
"hemeA_c"
]
},
"annotation":{
"bigg.metabolite":[
"hemeA"
],
"biocyc":[
"META:CPD-13734"
],
"chebi":[
"CHEBI:36163",
"CHEBI:24479",
"CHEBI:61715"
],
"hmdb":[
"HMDB06967",
"HMDB06901"
],
"inchi_key":[
"ZGGYGTCPXNDTRV-ONCSLILDSA-L"
],
"kegg.compound":[
"C15670"
],
"metanetx.chemical":[
"MNXM53309"
],
"reactome.compound":[
"2995348"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11312"
]
}
},
{
"id":"glucys_c",
"name":"Gamma-L-Glutamyl-L-cysteine",
"compartment":"c",
"charge":-1,
"formula":"C8H13N2O5S",
"notes":{
"original_bigg_ids":[
"glucys_c"
]
},
"annotation":{
"bigg.metabolite":[
"glucys"
],
"biocyc":[
"META:L-GAMMA-GLUTAMYLCYSTEINE"
],
"chebi":[
"CHEBI:24194",
"CHEBI:39975",
"CHEBI:17515",
"CHEBI:17971",
"CHEBI:10566",
"CHEBI:58173",
"CHEBI:10570",
"CHEBI:24185",
"CHEBI:12404",
"CHEBI:12400"
],
"hmdb":[
"HMDB01049"
],
"inchi_key":[
"RITKHVBHSGLULN-WHFBIAKZSA-M"
],
"kegg.compound":[
"C00669"
],
"metanetx.chemical":[
"MNXM412"
],
"reactome.compound":[
"174393"
],
"sabiork":[
"5172"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00506"
]
}
},
{
"id":"indole_c",
"name":"Indole",
"compartment":"c",
"charge":0,
"formula":"C8H7N",
"notes":{
"original_bigg_ids":[
"indole_c"
]
},
"annotation":{
"bigg.metabolite":[
"indole"
],
"biocyc":[
"META:INDOLE"
],
"chebi":[
"CHEBI:43537",
"CHEBI:16881",
"CHEBI:35579",
"CHEBI:14444",
"CHEBI:5900",
"CHEBI:24794",
"CHEBI:35581"
],
"hmdb":[
"HMDB00738"
],
"inchi_key":[
"SIKJAQJRHWYJAI-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00463"
],
"metanetx.chemical":[
"MNXM377"
],
"reactome.compound":[
"216547"
],
"sabiork":[
"5101"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00359"
]
}
},
{
"id":"dscl_c",
"name":"Dihydrosirohydrochlorin",
"compartment":"c",
"charge":-7,
"formula":"C42H41N4O16",
"notes":{
"original_bigg_ids":[
"dscl_c"
]
},
"annotation":{
"bigg.metabolite":[
"dscl"
],
"biocyc":[
"META:DIHYDROSIROHYDROCHLORIN"
],
"chebi":[
"CHEBI:58827",
"CHEBI:50602",
"CHEBI:14870",
"CHEBI:8370"
],
"inchi_key":[
"OQIIYZQTTMKFAU-ZNLOQLQNSA-G"
],
"kegg.compound":[
"C02463"
],
"metanetx.chemical":[
"MNXM672"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01620"
]
}
},
{
"id":"ichor_c",
"name":"Isochorismate",
"compartment":"c",
"charge":-2,
"formula":"C10H8O6",
"notes":{
"original_bigg_ids":[
"ichor_c"
]
},
"annotation":{
"bigg.metabolite":[
"ichor"
],
"biocyc":[
"META:ISOCHORISMATE"
],
"chebi":[
"CHEBI:24883",
"CHEBI:17582",
"CHEBI:14464",
"CHEBI:5997",
"CHEBI:29780"
],
"inchi_key":[
"NTGWPRCCOQCMGE-YUMQZZPRSA-L"
],
"kegg.compound":[
"C00885"
],
"metanetx.chemical":[
"MNXM799"
],
"sabiork":[
"5298"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00658"
]
}
},
{
"id":"glycogen_c",
"name":"Glycogen C6H10O5",
"compartment":"c",
"charge":0,
"formula":"C12H21O10R",
"notes":{
"original_bigg_ids":[
"glycogen_c"
]
},
"annotation":{
"bigg.metabolite":[
"glycogen"
],
"biocyc":[
"META:Glycogens"
],
"chebi":[
"CHEBI:24379",
"CHEBI:28087",
"CHEBI:5466",
"CHEBI:24384"
],
"hmdb":[
"HMDB00757"
],
"kegg.compound":[
"C00182"
],
"kegg.glycan":[
"G11603"
],
"metanetx.chemical":[
"MNXM55375"
],
"sabiork":[
"1962"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27186",
"cpd00155"
]
}
},
{
"id":"pant__R_c",
"name":"(R)-Pantoate",
"compartment":"c",
"charge":-1,
"formula":"C6H11O4",
"notes":{
"original_bigg_ids":[
"pant__R_c"
]
},
"annotation":{
"bigg.metabolite":[
"pant__R"
],
"biocyc":[
"META:L-PANTOATE"
],
"chebi":[
"CHEBI:18696",
"CHEBI:350",
"CHEBI:18695",
"CHEBI:15980",
"CHEBI:18697",
"CHEBI:44662",
"CHEBI:11006",
"CHEBI:14737"
],
"inchi_key":[
"OTOIIPJYVQJATP-BYPYZUCNSA-M"
],
"kegg.compound":[
"C00522"
],
"metanetx.chemical":[
"MNXM593"
],
"sabiork":[
"21325",
"5130"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00408"
]
}
},
{
"id":"5aop_c",
"name":"5-Amino-4-oxopentanoate",
"compartment":"c",
"charge":0,
"formula":"C5H9NO3",
"notes":{
"original_bigg_ids":[
"5aop_c"
]
},
"annotation":{
"bigg.metabolite":[
"5aop"
],
"biocyc":[
"META:5-AMINO-LEVULINATE"
],
"chebi":[
"CHEBI:20547",
"CHEBI:356416",
"CHEBI:132970",
"CHEBI:12109",
"CHEBI:2034",
"CHEBI:17549"
],
"hmdb":[
"HMDB01149"
],
"inchi_key":[
"ZGXJTSGNIOSYLO-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00430"
],
"kegg.drug":[
"D07567"
],
"lipidmaps":[
"LMFA01100055"
],
"metanetx.chemical":[
"MNXM405"
],
"reactome.compound":[
"189489",
"189466"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00338"
]
}
},
{
"id":"phdp_c",
"name":"Phytyl diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C20H39O7P2",
"notes":{
"original_bigg_ids":[
"phdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"phdp"
],
"biocyc":[
"META:PHYTYL-PYROPHOSPHATE"
],
"chebi":[
"CHEBI:8197",
"CHEBI:58404",
"CHEBI:14837",
"CHEBI:75837",
"CHEBI:75434",
"CHEBI:18187"
],
"hmdb":[
"HMDB11116"
],
"inchi_key":[
"ITPLBNCCPZSWEU-PYDDKJGSSA-K"
],
"kegg.compound":[
"C05427"
],
"lipidmaps":[
"LMPR0104010017",
"LMPR0104010008"
],
"metanetx.chemical":[
"MNXM903"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03214"
]
}
},
{
"id":"gthrd_c",
"name":"Reduced glutathione",
"compartment":"c",
"charge":-1,
"formula":"C10H16N3O6S",
"notes":{
"original_bigg_ids":[
"gthrd_c"
]
},
"annotation":{
"bigg.metabolite":[
"gthrd"
],
"biocyc":[
"META:GLUTATHIONE"
],
"chebi":[
"CHEBI:43049",
"CHEBI:14327",
"CHEBI:16856",
"CHEBI:57925",
"CHEBI:12402",
"CHEBI:24334",
"CHEBI:5437",
"CHEBI:42873"
],
"hmdb":[
"HMDB01463",
"HMDB62697",
"HMDB00125",
"HMDB06960"
],
"inchi_key":[
"RWSXRVCMGQZWBV-WDSKDSINSA-M"
],
"kegg.compound":[
"C00051"
],
"kegg.drug":[
"D00014"
],
"metanetx.chemical":[
"MNXM57"
],
"reactome.compound":[
"1247892",
"1500783",
"1655887",
"29450",
"158543"
],
"sabiork":[
"1926"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00042"
]
}
},
{
"id":"k_p",
"name":"Potassium",
"compartment":"p",
"charge":1,
"formula":"K",
"notes":{
"original_bigg_ids":[
"k_p"
]
},
"annotation":{
"bigg.metabolite":[
"k"
],
"biocyc":[
"META:K+"
],
"chebi":[
"CHEBI:26219",
"CHEBI:29103",
"CHEBI:8345",
"CHEBI:49685"
],
"hmdb":[
"HMDB00586"
],
"inchi_key":[
"NPYPAHLBTDXSSS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00238"
],
"kegg.drug":[
"D08403"
],
"metanetx.chemical":[
"MNXM95"
],
"reactome.compound":[
"74126",
"5626313",
"29804"
],
"sabiork":[
"21"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00205"
]
}
},
{
"id":"r5p_c",
"name":"Alpha-D-Ribose 5-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H9O8P",
"notes":{
"original_bigg_ids":[
"r5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"r5p"
],
"biocyc":[
"META:CPD-15318"
],
"chebi":[
"CHEBI:18189",
"CHEBI:22413",
"CHEBI:12331",
"CHEBI:10270"
],
"inchi_key":[
"KTVPXOYAKDPRHY-AIHAYLRMSA-L"
],
"kegg.compound":[
"C03736"
],
"metanetx.chemical":[
"MNXM15900"
],
"sabiork":[
"1473"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19028"
]
}
},
{
"id":"no3_p",
"name":"Nitrate",
"compartment":"p",
"charge":-1,
"formula":"NO3",
"notes":{
"original_bigg_ids":[
"no3_p"
]
},
"annotation":{
"bigg.metabolite":[
"no3"
],
"biocyc":[
"META:NITRATE",
"META:CPD-15028"
],
"chebi":[
"CHEBI:44487",
"CHEBI:14654",
"CHEBI:71263",
"CHEBI:7580",
"CHEBI:17632",
"CHEBI:48107",
"CHEBI:25545"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/706be27f-b4cf-4022-b2ef-04cec5197ca5"
],
"hmdb":[
"HMDB02878",
"HMDB01853"
],
"inchi_key":[
"NHNBFGGVMKEFGY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00244"
],
"kegg.drug":[
"D02313"
],
"metanetx.chemical":[
"MNXM207"
],
"sabiork":[
"1988"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00209"
]
}
},
{
"id":"fgam_c",
"name":"N2-Formyl-N1-(5-phospho-D-ribosyl)glycinamide",
"compartment":"c",
"charge":-2,
"formula":"C8H13N2O9P",
"notes":{
"original_bigg_ids":[
"fgam_c"
]
},
"annotation":{
"bigg.metabolite":[
"fgam"
],
"biocyc":[
"META:5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE"
],
"chebi":[
"CHEBI:12635",
"CHEBI:42411",
"CHEBI:58426",
"CHEBI:18272",
"CHEBI:20498",
"CHEBI:1982"
],
"hmdb":[
"HMDB01308",
"HMDB06476"
],
"inchi_key":[
"VDXLUNDMVKSKHO-ZRTZXPPTSA-L"
],
"kegg.compound":[
"C04376"
],
"metanetx.chemical":[
"MNXM453"
],
"reactome.compound":[
"111354"
],
"sabiork":[
"1889"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02678"
]
}
},
{
"id":"adpglc_c",
"name":"ADPglucose C16H23N5O15P2",
"compartment":"c",
"charge":-2,
"formula":"C16H23N5O15P2",
"notes":{
"original_bigg_ids":[
"adpglc_c"
]
},
"annotation":{
"bigg.metabolite":[
"adpglc"
],
"biocyc":[
"META:ADP-D-GLUCOSE"
],
"chebi":[
"CHEBI:40615",
"CHEBI:20846",
"CHEBI:57498",
"CHEBI:13230",
"CHEBI:15751",
"CHEBI:2349"
],
"hmdb":[
"HMDB62621",
"HMDB06557",
"HMDB12186"
],
"inchi_key":[
"WFPZSXYXPSUOPY-ROYWQJLOSA-L"
],
"kegg.compound":[
"C00498"
],
"kegg.glycan":[
"G11109"
],
"metanetx.chemical":[
"MNXM561"
],
"sabiork":[
"3922"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00387"
]
}
},
{
"id":"grdp_c",
"name":"Geranyl diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C10H17O7P2",
"notes":{
"original_bigg_ids":[
"grdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"grdp"
],
"biocyc":[
"META:GERANYL-PP"
],
"chebi":[
"CHEBI:17211",
"CHEBI:24223",
"CHEBI:58057",
"CHEBI:42877",
"CHEBI:14299",
"CHEBI:5332"
],
"hmdb":[
"HMDB01285",
"HMDB02239",
"HMDB06506",
"HMDB01560"
],
"inchi_key":[
"GVVPGTZRZFNKDS-JXMROGBWSA-K"
],
"kegg.compound":[
"C00341"
],
"lipidmaps":[
"LMPR0102010001"
],
"metanetx.chemical":[
"MNXM100"
],
"reactome.compound":[
"191409"
],
"sabiork":[
"5050",
"1846"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00283",
"cpd03476"
]
}
},
{
"id":"air_c",
"name":"5-amino-1-(5-phospho-D-ribosyl)imidazole",
"compartment":"c",
"charge":-2,
"formula":"C8H12N3O7P",
"notes":{
"original_bigg_ids":[
"air_c"
]
},
"annotation":{
"bigg.metabolite":[
"air"
],
"chebi":[
"CHEBI:28843",
"CHEBI:12101",
"CHEBI:18969",
"CHEBI:2655",
"CHEBI:58592"
],
"hmdb":[
"HMDB62575"
],
"inchi_key":[
"PDACUKOKVHBVHJ-ZRTZXPPTSA-M"
],
"metanetx.chemical":[
"MNXM162266"
],
"sbo":"SBO:0000247"
}
},
{
"id":"fe3_p",
"name":"Iron (Fe3+)",
"compartment":"p",
"charge":3,
"formula":"Fe",
"notes":{
"original_bigg_ids":[
"fe3_p"
]
},
"annotation":{
"bigg.metabolite":[
"fe3"
],
"biocyc":[
"META:FE+3"
],
"chebi":[
"CHEBI:49595",
"CHEBI:13320",
"CHEBI:24877",
"CHEBI:21130",
"CHEBI:29034",
"CHEBI:34755"
],
"hmdb":[
"HMDB12943"
],
"inchi_key":[
"VTLYFUHAOXGGBS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C14819"
],
"metanetx.chemical":[
"MNXM196"
],
"reactome.compound":[
"917966",
"111736",
"917943",
"912519",
"912516"
],
"sabiork":[
"1361"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd10516"
]
}
},
{
"id":"ohpb_c",
"name":"2-Oxo-3-hydroxy-4-phosphobutanoate",
"compartment":"c",
"charge":-3,
"formula":"C4H4O8P",
"notes":{
"original_bigg_ids":[
"ohpb_c"
]
},
"annotation":{
"bigg.metabolite":[
"ohpb"
],
"biocyc":[
"META:3OH-4P-OH-ALPHA-KETOBUTYRATE"
],
"chebi":[
"CHEBI:19731",
"CHEBI:58538",
"CHEBI:1240",
"CHEBI:27951"
],
"hmdb":[
"HMDB06801"
],
"inchi_key":[
"MZJFVXDTNBHTKZ-UWTATZPHSA-K"
],
"kegg.compound":[
"C06054"
],
"metanetx.chemical":[
"MNXM1514"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03606"
]
}
},
{
"id":"mobd_p",
"name":"Molybdate",
"compartment":"p",
"charge":-2,
"formula":"MoO4",
"notes":{
"original_bigg_ids":[
"mobd_p"
]
},
"annotation":{
"bigg.metabolite":[
"mobd"
],
"biocyc":[
"META:CPD-3"
],
"chebi":[
"CHEBI:36263",
"CHEBI:25368",
"CHEBI:36264",
"CHEBI:25371",
"CHEBI:6967"
],
"hmdb":[
"HMDB12260"
],
"inchi_key":[
"MEFBJEMVZONFCJ-UHFFFAOYSA-N"
],
"kegg.compound":[
"C06232"
],
"metanetx.chemical":[
"MNXM1026"
],
"reactome.compound":[
"947561"
],
"sabiork":[
"8470"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11574"
]
}
},
{
"id":"3hoctaACP_c",
"name":"(R)-3-Hydroxyoctadecanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C18H35O2SR",
"notes":{
"original_bigg_ids":[
"3hoctaACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3hoctaACP"
],
"kegg.compound":[
"C16220"
],
"metanetx.chemical":[
"MNXM6417"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15371"
]
}
},
{
"id":"ipdp_c",
"name":"Isopentenyl diphosphate",
"compartment":"c",
"charge":-3,
"formula":"C5H9O7P2",
"notes":{
"original_bigg_ids":[
"ipdp_c"
]
},
"annotation":{
"bigg.metabolite":[
"ipdp"
],
"biocyc":[
"META:DELTA3-ISOPENTENYL-PP"
],
"chebi":[
"CHEBI:128769",
"CHEBI:24907",
"CHEBI:6037",
"CHEBI:14473",
"CHEBI:16584"
],
"hmdb":[
"HMDB01347",
"HMDB04196"
],
"inchi_key":[
"NUHSROFQTUXZQQ-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00129"
],
"lipidmaps":[
"LMPR01010008"
],
"metanetx.chemical":[
"MNXM83"
],
"reactome.compound":[
"191362",
"2162256"
],
"sabiork":[
"5009"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00113"
]
}
},
{
"id":"hmbil_c",
"name":"Hydroxymethylbilane",
"compartment":"c",
"charge":-8,
"formula":"C40H38N4O17",
"notes":{
"original_bigg_ids":[
"hmbil_c"
]
},
"annotation":{
"bigg.metabolite":[
"hmbil"
],
"biocyc":[
"META:HYDROXYMETHYLBILANE"
],
"chebi":[
"CHEBI:14423",
"CHEBI:5809",
"CHEBI:57845",
"CHEBI:16645",
"CHEBI:24716"
],
"hmdb":[
"HMDB01137"
],
"inchi_key":[
"WDFJYRZCZIUBPR-UHFFFAOYSA-F"
],
"kegg.compound":[
"C01024"
],
"metanetx.chemical":[
"MNXM547"
],
"reactome.compound":[
"189449"
],
"sabiork":[
"5362"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00755"
]
}
},
{
"id":"ni2_p",
"name":"Nickel",
"compartment":"p",
"charge":2,
"formula":"Ni",
"notes":{
"original_bigg_ids":[
"ni2_p"
]
},
"annotation":{
"bigg.metabolite":[
"ni2"
],
"biocyc":[
"META:NI+2"
],
"chebi":[
"CHEBI:25517",
"CHEBI:49785",
"CHEBI:49786"
],
"hmdb":[
"HMDB02457"
],
"inchi_key":[
"VEQPNABPJHWNSG-UHFFFAOYSA-N"
],
"kegg.compound":[
"C19609"
],
"metanetx.chemical":[
"MNXM3673"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd20862"
]
}
},
{
"id":"arg__L_c",
"name":"L-Arginine",
"compartment":"c",
"charge":1,
"formula":"C6H15N4O2",
"notes":{
"original_bigg_ids":[
"arg__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"arg__L"
],
"biocyc":[
"META:ARG"
],
"chebi":[
"CHEBI:32683",
"CHEBI:22616",
"CHEBI:2643",
"CHEBI:32681",
"CHEBI:13077",
"CHEBI:32682",
"CHEBI:16467",
"CHEBI:21235",
"CHEBI:42927",
"CHEBI:6185",
"CHEBI:32696",
"CHEBI:32695",
"CHEBI:29016",
"CHEBI:32697",
"CHEBI:133495"
],
"hmdb":[
"HMDB62762",
"HMDB00517"
],
"inchi_key":[
"ODKSFYDXXFIFQN-BYPYZUCNSA-O"
],
"kegg.compound":[
"C02385",
"C00062"
],
"kegg.drug":[
"D02982"
],
"metanetx.chemical":[
"MNXM70"
],
"reactome.compound":[
"351977",
"29468",
"374064",
"113530"
],
"sabiork":[
"2410",
"23080",
"80"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00051",
"cpd19021"
]
}
},
{
"id":"3psme_c",
"name":"5-O-(1-Carboxyvinyl)-3-phosphoshikimate",
"compartment":"c",
"charge":-4,
"formula":"C10H9O10P",
"notes":{
"original_bigg_ids":[
"3psme_c"
]
},
"annotation":{
"bigg.metabolite":[
"3psme"
],
"biocyc":[
"META:3-ENOLPYRUVYL-SHIKIMATE-5P"
],
"chebi":[
"CHEBI:20533",
"CHEBI:57701",
"CHEBI:2104",
"CHEBI:12094",
"CHEBI:12097",
"CHEBI:16257"
],
"inchi_key":[
"QUTYKIXIUDQOLK-PRJMDXOYSA-J"
],
"kegg.compound":[
"C01269"
],
"metanetx.chemical":[
"MNXM1365"
],
"reactome.compound":[
"964900"
],
"sabiork":[
"5488"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00932"
]
}
},
{
"id":"phe__L_c",
"name":"L-Phenylalanine",
"compartment":"c",
"charge":0,
"formula":"C9H11NO2",
"notes":{
"original_bigg_ids":[
"phe__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"phe__L"
],
"biocyc":[
"META:PHE"
],
"chebi":[
"CHEBI:21370",
"CHEBI:32505",
"CHEBI:13151",
"CHEBI:32504",
"CHEBI:32486",
"CHEBI:44885",
"CHEBI:58095",
"CHEBI:45079",
"CHEBI:28044",
"CHEBI:6282",
"CHEBI:32487",
"CHEBI:8089",
"CHEBI:76052",
"CHEBI:17295",
"CHEBI:25984",
"CHEBI:44851"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/447fdbbc-919c-4e8d-aed3-c0533f3e6047",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/c1b55d6f-7946-4f39-9dc6-ac0f47865b8b"
],
"hmdb":[
"HMDB00159",
"HMDB00612"
],
"inchi_key":[
"COLNVLDHVKWLRT-QMMMGPOBSA-N"
],
"kegg.compound":[
"C00079",
"C02057"
],
"kegg.drug":[
"D00021"
],
"metanetx.chemical":[
"MNXM97"
],
"reactome.compound":[
"29502",
"379701",
"351993"
],
"sabiork":[
"2365",
"83"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00066",
"cpd01400"
]
}
},
{
"id":"cynt_p",
"name":"Cyanate",
"compartment":"p",
"charge":-1,
"formula":"CNO",
"notes":{
"original_bigg_ids":[
"cynt_p"
]
},
"annotation":{
"bigg.metabolite":[
"cynt"
],
"biocyc":[
"META:CPD-69"
],
"chebi":[
"CHEBI:29202",
"CHEBI:3968",
"CHEBI:14037",
"CHEBI:23419",
"CHEBI:29195",
"CHEBI:23422",
"CHEBI:28024"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/20a1ab57-2ac5-44c6-8390-60706fcc3fa1"
],
"hmdb":[
"HMDB02078"
],
"inchi_key":[
"XLJMAIOERFSOGZ-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01417"
],
"metanetx.chemical":[
"MNXM1191"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01015"
]
}
},
{
"id":"acgam1p_c",
"name":"N-Acetyl-D-glucosamine 1-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C8H14NO9P",
"notes":{
"original_bigg_ids":[
"acgam1p_c"
]
},
"annotation":{
"bigg.metabolite":[
"acgam1p"
],
"chebi":[
"CHEBI:7125"
],
"hmdb":[
"HMDB01367"
],
"inchi_key":[
"FZLJPEPAYPUMMR-RTRLPJTCSA-L"
],
"kegg.compound":[
"C04256"
],
"metanetx.chemical":[
"MNXM91871"
],
"reactome.compound":[
"532204"
],
"sabiork":[
"1801",
"26400"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02611"
]
}
},
{
"id":"nadp_c",
"name":"Nicotinamide adenine dinucleotide phosphate",
"compartment":"c",
"charge":-3,
"formula":"C21H25N7O17P3",
"notes":{
"original_bigg_ids":[
"nadp_c"
]
},
"annotation":{
"bigg.metabolite":[
"nadp"
],
"biocyc":[
"META:NADP"
],
"chebi":[
"CHEBI:29868",
"CHEBI:44405",
"CHEBI:25523",
"CHEBI:13397",
"CHEBI:18009",
"CHEBI:7424",
"CHEBI:13398",
"CHEBI:21903",
"CHEBI:58349",
"CHEBI:44409"
],
"hmdb":[
"HMDB00217"
],
"inchi_key":[
"XJLXINKUBYWONI-NNYOXOHSSA-K"
],
"kegg.compound":[
"C00006"
],
"metanetx.chemical":[
"MNXM5"
],
"reactome.compound":[
"194668",
"113563",
"6790191",
"5623650",
"2000348",
"389556",
"29366",
"351628",
"113564"
],
"sabiork":[
"1263"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00006"
]
}
},
{
"id":"pi_p",
"name":"Phosphate",
"compartment":"p",
"charge":-2,
"formula":"HO4P",
"notes":{
"original_bigg_ids":[
"pi_p"
]
},
"annotation":{
"bigg.metabolite":[
"pi"
],
"biocyc":[
"META:Pi",
"META:CPD-16459",
"META:PHOSPHATE-GROUP"
],
"chebi":[
"CHEBI:26078",
"CHEBI:18367",
"CHEBI:29139",
"CHEBI:39739",
"CHEBI:43470",
"CHEBI:35780",
"CHEBI:43474",
"CHEBI:26020",
"CHEBI:45024",
"CHEBI:39745",
"CHEBI:29137",
"CHEBI:14791",
"CHEBI:7793"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/db5219ee-60cb-4370-b066-340c9faf069c",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/84684967-eade-48d4-b25d-c4aede0a0836",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/ad82c39b-2edb-4953-b971-79a2d2ea6e26",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/aac01fea-4223-49c1-8b12-cd50f11ebfc8",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/c581b2ce-6238-45de-abc0-60ca8d47ed04"
],
"hmdb":[
"HMDB02105",
"HMDB00973",
"HMDB01429",
"HMDB02142",
"HMDB05947"
],
"inchi_key":[
"NBIIXXVUZAFLBC-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00009"
],
"kegg.drug":[
"D05467"
],
"metanetx.chemical":[
"MNXM9"
],
"reactome.compound":[
"5228339",
"113550",
"8851513",
"113551",
"109277",
"29372",
"8851226",
"113548"
],
"sabiork":[
"36"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27787",
"cpd00009"
]
}
},
{
"id":"thrp_c",
"name":"L-Threonine O-3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C4H8NO6P",
"notes":{
"original_bigg_ids":[
"thrp_c"
]
},
"annotation":{
"bigg.metabolite":[
"thrp"
],
"biocyc":[
"META:L-THREONINE-O-3-PHOSPHATE"
],
"chebi":[
"CHEBI:58675",
"CHEBI:45955",
"CHEBI:37525",
"CHEBI:31757",
"CHEBI:21967"
],
"hmdb":[
"HMDB11185"
],
"inchi_key":[
"USRGIUJOYOXOQJ-GBXIJSLDSA-L"
],
"kegg.compound":[
"C12147"
],
"metanetx.chemical":[
"MNXM1492"
],
"sabiork":[
"14183"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd08928"
]
}
},
{
"id":"3ig3p_c",
"name":"C'-(3-Indolyl)-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C11H12NO6P",
"notes":{
"original_bigg_ids":[
"3ig3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"3ig3p"
],
"biocyc":[
"META:INDOLE-3-GLYCEROL-P"
],
"chebi":[
"CHEBI:58866",
"CHEBI:51793"
],
"inchi_key":[
"NQEQTYPJSIEPHW-MNOVXSKESA-L"
],
"kegg.compound":[
"C03506"
],
"metanetx.chemical":[
"MNXM866"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02210",
"cpd29667"
]
}
},
{
"id":"akg_c",
"name":"2-Oxoglutarate",
"compartment":"c",
"charge":-2,
"formula":"C5H4O5",
"notes":{
"original_bigg_ids":[
"akg_c"
]
},
"annotation":{
"bigg.metabolite":[
"akg"
],
"biocyc":[
"META:2-KETOGLUTARATE"
],
"chebi":[
"CHEBI:40661",
"CHEBI:16810",
"CHEBI:11638",
"CHEBI:30916",
"CHEBI:19749",
"CHEBI:1253",
"CHEBI:30915",
"CHEBI:19748"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/5b0a94f6-d411-44fd-bcc1-fb79b4e697f5",
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/6557f3f2-0ab8-494b-a865-8ce0eae788a9"
],
"hmdb":[
"HMDB00208",
"HMDB02812",
"HMDB62781"
],
"inchi_key":[
"KPGXRSRHYNQIFN-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00026"
],
"metanetx.chemical":[
"MNXM20"
],
"reactome.compound":[
"113594",
"561075",
"5278317",
"113671",
"29406",
"389537"
],
"sabiork":[
"1922"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00024"
]
}
},
{
"id":"val__L_c",
"name":"L-Valine",
"compartment":"c",
"charge":0,
"formula":"C5H11NO2",
"notes":{
"original_bigg_ids":[
"val__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"val__L"
],
"biocyc":[
"META:VAL"
],
"chebi":[
"CHEBI:32859",
"CHEBI:57762",
"CHEBI:13186",
"CHEBI:16414",
"CHEBI:6321",
"CHEBI:21417",
"CHEBI:46418",
"CHEBI:46282",
"CHEBI:32852",
"CHEBI:32851",
"CHEBI:87977",
"CHEBI:32860",
"CHEBI:27266",
"CHEBI:46376",
"CHEBI:46484"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b2ec1d47-f20f-4b19-9b15-ac1a3c2159c5",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/65a4c231-5232-4f08-93e2-007eb0537f0e"
],
"hmdb":[
"HMDB00883",
"HMDB34366"
],
"inchi_key":[
"KZSNJWFQEVHDMF-BYPYZUCNSA-N"
],
"kegg.compound":[
"C16436",
"C00183"
],
"kegg.drug":[
"D00039"
],
"lipidmaps":[
"LMFA01100046"
],
"metanetx.chemical":[
"MNXM199"
],
"reactome.compound":[
"113540",
"29702"
],
"sabiork":[
"68",
"23113"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15141",
"cpd00156"
]
}
},
{
"id":"dtdpglu_c",
"name":"DTDPglucose",
"compartment":"c",
"charge":-2,
"formula":"C16H24N2O16P2",
"notes":{
"original_bigg_ids":[
"dtdpglu_c"
]
},
"annotation":{
"bigg.metabolite":[
"dtdpglu"
],
"biocyc":[
"META:DTDP-D-GLUCOSE"
],
"chebi":[
"CHEBI:57477",
"CHEBI:14091",
"CHEBI:10526",
"CHEBI:10528",
"CHEBI:14089",
"CHEBI:15700",
"CHEBI:23556"
],
"hmdb":[
"HMDB62805"
],
"inchi_key":[
"YSYKRGRSMLTJNL-URARBOGNSA-L"
],
"kegg.compound":[
"C00842"
],
"metanetx.chemical":[
"MNXM1376"
],
"sabiork":[
"3923"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00626"
]
}
},
{
"id":"h2o_e",
"name":"H2O H2O",
"compartment":"e",
"charge":0,
"formula":"H2O",
"notes":{
"original_bigg_ids":[
"h2o_e"
]
},
"annotation":{
"bigg.metabolite":[
"h2o"
],
"biocyc":[
"META:CPD-15815",
"META:OXONIUM",
"META:HYDROXYL-GROUP",
"META:WATER",
"META:OH"
],
"chebi":[
"CHEBI:13352",
"CHEBI:30490",
"CHEBI:43228",
"CHEBI:33813",
"CHEBI:44292",
"CHEBI:44641",
"CHEBI:27313",
"CHEBI:42043",
"CHEBI:44819",
"CHEBI:29356",
"CHEBI:5594",
"CHEBI:10743",
"CHEBI:15377",
"CHEBI:42857",
"CHEBI:13365",
"CHEBI:29412",
"CHEBI:16234",
"CHEBI:13419",
"CHEBI:5585",
"CHEBI:44701"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/799908db-b8c9-4982-86cb-1f225e2ad08c",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/e7f34a8e-cded-4793-b6d5-792335b38636",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/969d0227-3069-4e44-9525-7ae7bad84170"
],
"hmdb":[
"HMDB02111",
"HMDB01039"
],
"inchi_key":[
"XLYOFNOQVPJJNP-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00001",
"C01328"
],
"kegg.drug":[
"D00001",
"D06322"
],
"metanetx.chemical":[
"MNXM2"
],
"reactome.compound":[
"113521",
"141343",
"2022884",
"5278291",
"29356",
"189422",
"5668574",
"5693747",
"109276",
"113519",
"1605715",
"8851517",
"113518",
"351603"
],
"sabiork":[
"40"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27222",
"cpd00001",
"cpd15275"
]
}
},
{
"id":"dmbzid_c",
"name":"5,6-Dimethylbenzimidazole",
"compartment":"c",
"charge":0,
"formula":"C9H10N2",
"notes":{
"original_bigg_ids":[
"dmbzid_c"
]
},
"annotation":{
"bigg.metabolite":[
"dmbzid"
],
"biocyc":[
"META:DIMETHYLBENZIMIDAZOLE"
],
"chebi":[
"CHEBI:14172",
"CHEBI:20516",
"CHEBI:4620",
"CHEBI:15890",
"CHEBI:42126"
],
"hmdb":[
"HMDB03701"
],
"inchi_key":[
"LJUQGASMPRMWIW-UHFFFAOYSA-N"
],
"kegg.compound":[
"C03114"
],
"metanetx.chemical":[
"MNXM1531"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01997"
]
}
},
{
"id":"o2_e",
"name":"O2 O2",
"compartment":"e",
"charge":0,
"formula":"O2",
"notes":{
"original_bigg_ids":[
"o2_e"
]
},
"annotation":{
"bigg.metabolite":[
"o2"
],
"biocyc":[
"META:OXYGEN-MOLECULE"
],
"chebi":[
"CHEBI:7860",
"CHEBI:26689",
"CHEBI:29097",
"CHEBI:15379",
"CHEBI:13416",
"CHEBI:27140",
"CHEBI:29793",
"CHEBI:30491",
"CHEBI:44742",
"CHEBI:23833",
"CHEBI:25366",
"CHEBI:10745"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/d5d12248-82d3-4cf3-b7d0-2e3d096768b4"
],
"hmdb":[
"HMDB01377"
],
"inchi_key":[
"MYMOFIZGZYHOMD-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00007"
],
"kegg.drug":[
"D00003"
],
"metanetx.chemical":[
"MNXM4"
],
"reactome.compound":[
"113534",
"113535",
"113685",
"5668566",
"189461",
"113533",
"1131511",
"352327",
"351593",
"29368",
"1236709"
],
"sabiork":[
"1264"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00007"
]
}
},
{
"id":"thmpp_c",
"name":"Thiamine diphosphate",
"compartment":"c",
"charge":-2,
"formula":"C12H16N4O7P2S",
"notes":{
"original_bigg_ids":[
"thmpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"thmpp"
],
"biocyc":[
"META:THIAMINE-PYROPHOSPHATE"
],
"chebi":[
"CHEBI:15229",
"CHEBI:58937",
"CHEBI:45931",
"CHEBI:45930",
"CHEBI:9532",
"CHEBI:49939"
],
"hmdb":[
"HMDB62636",
"HMDB01372"
],
"inchi_key":[
"AYEKOFBPNLCAJY-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00068"
],
"metanetx.chemical":[
"MNXM256"
],
"reactome.compound":[
"8878387",
"29480"
],
"sabiork":[
"1287"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00056"
]
}
},
{
"id":"2a3pp_c",
"name":"2-Amino-3-phosphonopropanoate",
"compartment":"c",
"charge":-2,
"formula":"C4H6NO7P",
"notes":{
"original_bigg_ids":[
"2a3pp_c"
]
},
"annotation":{
"bigg.metabolite":[
"2a3pp"
],
"biocyc":[
"META:CPD0-1615"
],
"chebi":[
"CHEBI:28388",
"CHEBI:19451",
"CHEBI:999"
],
"hmdb":[
"HMDB00370"
],
"inchi_key":[
"LBTABPSJONFLPO-UHFFFAOYSA-M"
],
"kegg.compound":[
"C05672"
],
"metanetx.chemical":[
"MNXM5455"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03378"
]
}
},
{
"id":"tpalm2eACP_c",
"name":"Trans-Hexadec-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C16H29OSR",
"notes":{
"original_bigg_ids":[
"tpalm2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"tpalm2eACP"
],
"biocyc":[
"META:2-Hexadecenoyl-ACPs"
],
"chebi":[
"CHEBI:10729"
],
"kegg.compound":[
"C05763"
],
"lipidmaps":[
"LMFA07060020"
],
"metanetx.chemical":[
"MNXM29072"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11477"
]
}
},
{
"id":"co2_e",
"name":"CO2 CO2",
"compartment":"e",
"charge":0,
"formula":"CO2",
"notes":{
"original_bigg_ids":[
"co2_e"
]
},
"annotation":{
"bigg.metabolite":[
"co2"
],
"biocyc":[
"META:CARBON-DIOXIDE"
],
"chebi":[
"CHEBI:23011",
"CHEBI:3283",
"CHEBI:48829",
"CHEBI:16526",
"CHEBI:13283",
"CHEBI:13285",
"CHEBI:13284",
"CHEBI:13282"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2ec3da94-5f50-4525-81b1-5607c5c7a3d3",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/05f60af4-0a3f-4ead-9a29-33bb0f123379"
],
"hmdb":[
"HMDB01967"
],
"inchi_key":[
"CURLTUGMZLYLDI-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00011"
],
"kegg.drug":[
"D00004"
],
"metanetx.chemical":[
"MNXM13"
],
"reactome.compound":[
"29376",
"5668565",
"189480",
"1132345",
"113528",
"1237009",
"159751",
"389536",
"159942"
],
"sabiork":[
"1266"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00011"
]
}
},
{
"id":"3mob_c",
"name":"3-Methyl-2-oxobutanoate",
"compartment":"c",
"charge":-1,
"formula":"C5H7O3",
"notes":{
"original_bigg_ids":[
"3mob_c"
]
},
"annotation":{
"bigg.metabolite":[
"3mob"
],
"biocyc":[
"META:2-KETO-ISOVALERATE"
],
"chebi":[
"CHEBI:11851",
"CHEBI:43714",
"CHEBI:132177",
"CHEBI:20115",
"CHEBI:1584",
"CHEBI:16530"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/dee66401-4b7f-4203-8ee3-fa61f1f45f03"
],
"hmdb":[
"HMDB04260",
"HMDB00019"
],
"inchi_key":[
"QHKABHOOEWYVLI-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00141"
],
"lipidmaps":[
"LMFA01020274"
],
"metanetx.chemical":[
"MNXM238"
],
"sabiork":[
"1945"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00123"
]
}
},
{
"id":"his__L_e",
"name":"L-Histidine",
"compartment":"e",
"charge":0,
"formula":"C6H9N3O2",
"notes":{
"original_bigg_ids":[
"his__L_e"
]
},
"annotation":{
"bigg.metabolite":[
"his__L"
],
"biocyc":[
"META:HIS"
],
"chebi":[
"CHEBI:43239",
"CHEBI:32529",
"CHEBI:43048",
"CHEBI:5733",
"CHEBI:32530",
"CHEBI:27570",
"CHEBI:32531",
"CHEBI:43118",
"CHEBI:32513",
"CHEBI:15971",
"CHEBI:43190",
"CHEBI:21324",
"CHEBI:32512",
"CHEBI:32511",
"CHEBI:13117",
"CHEBI:43114",
"CHEBI:32510",
"CHEBI:6240",
"CHEBI:32532",
"CHEBI:57595",
"CHEBI:24598"
],
"hmdb":[
"HMDB00177",
"HMDB03412"
],
"inchi_key":[
"HNDVDQJCIGZPNO-YFKPBYRVSA-N"
],
"kegg.compound":[
"C00768",
"C00135"
],
"kegg.drug":[
"D00032"
],
"metanetx.chemical":[
"MNXM134"
],
"reactome.compound":[
"379695",
"29612"
],
"sabiork":[
"2151",
"81"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00119",
"cpd00572"
]
}
},
{
"id":"h2o2_c",
"name":"Hydrogen peroxide",
"compartment":"c",
"charge":0,
"formula":"H2O2",
"notes":{
"original_bigg_ids":[
"h2o2_c"
]
},
"annotation":{
"bigg.metabolite":[
"h2o2"
],
"biocyc":[
"META:HYDROGEN-PEROXIDE"
],
"chebi":[
"CHEBI:29192",
"CHEBI:44785",
"CHEBI:13355",
"CHEBI:13354",
"CHEBI:29370",
"CHEBI:24637",
"CHEBI:44812",
"CHEBI:5586",
"CHEBI:25940",
"CHEBI:44782",
"CHEBI:16240"
],
"hmdb":[
"HMDB03125",
"HMDB06491"
],
"inchi_key":[
"MHAJPDPJQMAIIY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00027"
],
"kegg.drug":[
"D00008"
],
"metanetx.chemical":[
"MNXM22"
],
"reactome.compound":[
"1614617",
"29408",
"351629",
"189481",
"113575"
],
"sabiork":[
"1909"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00025"
]
}
},
{
"id":"alaala_c",
"name":"D-Alanyl-D-alanine",
"compartment":"c",
"charge":0,
"formula":"C6H12N2O3",
"notes":{
"original_bigg_ids":[
"alaala_c"
]
},
"annotation":{
"bigg.metabolite":[
"alaala"
],
"biocyc":[
"META:D-ALA-D-ALA"
],
"chebi":[
"CHEBI:13749",
"CHEBI:4088",
"CHEBI:16576",
"CHEBI:57822",
"CHEBI:12900",
"CHEBI:20894"
],
"hmdb":[
"HMDB03459"
],
"inchi_key":[
"DEFJQIDDEAULHB-QWWZWVQMSA-N"
],
"kegg.compound":[
"C00993"
],
"metanetx.chemical":[
"MNXM669"
],
"sabiork":[
"2204"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00731"
]
}
},
{
"id":"5prdmbz_c",
"name":"N1-(5-Phospho-alpha-D-ribosyl)-5,6-dimethylbenzimidazole",
"compartment":"c",
"charge":-2,
"formula":"C14H17N2O7P",
"notes":{
"original_bigg_ids":[
"5prdmbz_c"
]
},
"annotation":{
"bigg.metabolite":[
"5prdmbz"
],
"biocyc":[
"META:ALPHA-RIBAZOLE-5-P"
],
"chebi":[
"CHEBI:45256",
"CHEBI:12622",
"CHEBI:45218",
"CHEBI:16837",
"CHEBI:45255",
"CHEBI:7355",
"CHEBI:30599",
"CHEBI:57918",
"CHEBI:21797"
],
"hmdb":[
"HMDB03882"
],
"inchi_key":[
"ZMRGXEJKZPRBPJ-SYQHCUMBSA-L"
],
"kegg.compound":[
"C04778"
],
"metanetx.chemical":[
"MNXM1224"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02904"
]
}
},
{
"id":"pran_c",
"name":"N-(5-Phospho-D-ribosyl)anthranilate",
"compartment":"c",
"charge":-3,
"formula":"C12H13NO9P",
"notes":{
"original_bigg_ids":[
"pran_c"
]
},
"annotation":{
"bigg.metabolite":[
"pran"
],
"biocyc":[
"META:N-5-PHOSPHORIBOSYL-ANTHRANILATE"
],
"chebi":[
"CHEBI:12431",
"CHEBI:21472",
"CHEBI:12432",
"CHEBI:21488",
"CHEBI:7091",
"CHEBI:18277"
],
"inchi_key":[
"PMFMJXPRNJUYMB-GWOFURMSSA-K"
],
"kegg.compound":[
"C04302"
],
"metanetx.chemical":[
"MNXM1489"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02642"
]
}
},
{
"id":"cobalt2_e",
"name":"Co2+",
"compartment":"e",
"charge":2,
"formula":"Co",
"notes":{
"original_bigg_ids":[
"cobalt2_e"
]
},
"annotation":{
"bigg.metabolite":[
"cobalt2"
],
"biocyc":[
"META:CO+2"
],
"chebi":[
"CHEBI:48828",
"CHEBI:48827",
"CHEBI:23337"
],
"hmdb":[
"HMDB00608"
],
"inchi_key":[
"XLJKHNWPARRRJB-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00175"
],
"metanetx.chemical":[
"MNXM90960"
],
"sabiork":[
"23"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00149"
]
}
},
{
"id":"gdpfuc_c",
"name":"GDP-L-fucose",
"compartment":"c",
"charge":-2,
"formula":"C16H23N5O15P2",
"notes":{
"original_bigg_ids":[
"gdpfuc_c"
]
},
"annotation":{
"bigg.metabolite":[
"gdpfuc"
],
"biocyc":[
"META:CPD-13118",
"META:GUANOSINE_DIPHOSPHATE_FUCOSE"
],
"chebi":[
"CHEBI:13335",
"CHEBI:57984",
"CHEBI:13332",
"CHEBI:17009",
"CHEBI:57273",
"CHEBI:5221",
"CHEBI:21162"
],
"hmdb":[
"HMDB01095"
],
"inchi_key":[
"LQEBEXMHBLQMDB-JGQUBWHWSA-L"
],
"kegg.compound":[
"C00325"
],
"kegg.glycan":[
"G10615"
],
"metanetx.chemical":[
"MNXM193"
],
"reactome.compound":[
"742368",
"205683"
],
"sabiork":[
"1562"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd23744",
"cpd27127",
"cpd00272"
]
}
},
{
"id":"zn2_e",
"name":"Zinc",
"compartment":"e",
"charge":2,
"formula":"Zn",
"notes":{
"original_bigg_ids":[
"zn2_e"
]
},
"annotation":{
"bigg.metabolite":[
"zn2"
],
"biocyc":[
"META:ZN+2"
],
"chebi":[
"CHEBI:49982",
"CHEBI:49972",
"CHEBI:29105",
"CHEBI:27368",
"CHEBI:10113"
],
"hmdb":[
"HMDB01303"
],
"inchi_key":[
"PTFCDOFLOPIGGS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00038"
],
"metanetx.chemical":[
"MNXM149"
],
"reactome.compound":[
"216667",
"437093",
"29426",
"216785",
"435350",
"442320",
"158417"
],
"sabiork":[
"1281"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00034"
]
}
},
{
"id":"so4_e",
"name":"Sulfate",
"compartment":"e",
"charge":-2,
"formula":"O4S",
"notes":{
"original_bigg_ids":[
"so4_e"
]
},
"annotation":{
"bigg.metabolite":[
"so4"
],
"biocyc":[
"META:SULFATE",
"META:HSO4"
],
"chebi":[
"CHEBI:15135",
"CHEBI:45693",
"CHEBI:29199",
"CHEBI:9335",
"CHEBI:16189",
"CHEBI:45687",
"CHEBI:26836",
"CHEBI:45696"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/cf4fcd19-f2cb-4d92-aa67-323762e3b269"
],
"hmdb":[
"HMDB01448"
],
"inchi_key":[
"QAOWNCQODCNURD-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00059"
],
"kegg.drug":[
"D05963"
],
"metanetx.chemical":[
"MNXM58"
],
"reactome.compound":[
"174375",
"1606845",
"1609649",
"1614584",
"427648"
],
"sabiork":[
"1759"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29301",
"cpd00048"
]
}
},
{
"id":"tddec2eACP_c",
"name":"Trans-Dodec-2-enoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C12H21OSR",
"notes":{
"original_bigg_ids":[
"tddec2eACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"tddec2eACP"
],
"biocyc":[
"META:Dodec-2-enoyl-ACPs"
],
"chebi":[
"CHEBI:10725"
],
"kegg.compound":[
"C05758"
],
"lipidmaps":[
"LMFA07060016"
],
"metanetx.chemical":[
"MNXM23842"
],
"sabiork":[
"8118"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11469"
]
}
},
{
"id":"icit_c",
"name":"Isocitrate",
"compartment":"c",
"charge":-3,
"formula":"C6H5O7",
"notes":{
"original_bigg_ids":[
"icit_c"
]
},
"annotation":{
"bigg.metabolite":[
"icit"
],
"chebi":[
"CHEBI:16087",
"CHEBI:36454",
"CHEBI:5998",
"CHEBI:24886",
"CHEBI:36453",
"CHEBI:14465",
"CHEBI:30887",
"CHEBI:24884"
],
"hmdb":[
"HMDB00193"
],
"inchi_key":[
"ODBLHEXUDAPZAU-UHFFFAOYSA-K"
],
"kegg.compound":[
"C00311"
],
"metanetx.chemical":[
"MNXM89661"
],
"sabiork":[
"2013"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00260"
]
}
},
{
"id":"glyc_c",
"name":"Glycerol",
"compartment":"c",
"charge":0,
"formula":"C3H8O3",
"notes":{
"original_bigg_ids":[
"glyc_c"
]
},
"annotation":{
"bigg.metabolite":[
"glyc"
],
"biocyc":[
"META:GLYCEROL"
],
"chebi":[
"CHEBI:5448",
"CHEBI:14334",
"CHEBI:42998",
"CHEBI:17754",
"CHEBI:24351",
"CHEBI:131422"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/48edd8a9-6a4a-4900-b0cf-97b1ccaa1125",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2e8c8093-3269-46b3-be2e-f1df9fdde25c"
],
"hmdb":[
"HMDB00131"
],
"inchi_key":[
"PEDCQBHIVMGVHV-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00116"
],
"kegg.drug":[
"D00028"
],
"metanetx.chemical":[
"MNXM89612"
],
"reactome.compound":[
"192438",
"76116"
],
"sabiork":[
"1303"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00100"
]
}
},
{
"id":"3ooctACP_c",
"name":"3-Oxooctanoyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C8H13O2SR",
"notes":{
"original_bigg_ids":[
"3ooctACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"3ooctACP"
],
"biocyc":[
"META:3-Oxo-octanoyl-ACPs"
],
"chebi":[
"CHEBI:1646"
],
"kegg.compound":[
"C05750"
],
"lipidmaps":[
"LMFA07060008"
],
"metanetx.chemical":[
"MNXM28031"
],
"sabiork":[
"8110"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11490"
]
}
},
{
"id":"4ampm_c",
"name":"4-Amino-2-methyl-5-phosphomethylpyrimidine",
"compartment":"c",
"charge":-2,
"formula":"C6H8N3O4P",
"notes":{
"original_bigg_ids":[
"4ampm_c"
]
},
"annotation":{
"bigg.metabolite":[
"4ampm"
],
"chebi":[
"CHEBI:44219"
],
"inchi_key":[
"SSWDVESQMBHOQT-UHFFFAOYSA-N"
],
"metanetx.chemical":[
"MNXM31161"
],
"sabiork":[
"7398"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02775"
]
}
},
{
"id":"spmd_e",
"name":"Spermidine",
"compartment":"e",
"charge":3,
"formula":"C7H22N3",
"notes":{
"original_bigg_ids":[
"spmd_e"
]
},
"annotation":{
"bigg.metabolite":[
"spmd"
],
"biocyc":[
"META:SPERMIDINE"
],
"chebi":[
"CHEBI:57834",
"CHEBI:15097",
"CHEBI:26732",
"CHEBI:26733",
"CHEBI:9218",
"CHEBI:45647",
"CHEBI:15095",
"CHEBI:16610"
],
"hmdb":[
"HMDB01257"
],
"inchi_key":[
"ATHGHQPFGPMSJY-UHFFFAOYSA-Q"
],
"kegg.compound":[
"C00315"
],
"metanetx.chemical":[
"MNXM124"
],
"reactome.compound":[
"204635",
"141324"
],
"sabiork":[
"3088"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00264"
]
}
},
{
"id":"cdp4dh6doglc_c",
"name":"CDP-4-dehydro-6-deoxy-D-glucose",
"compartment":"c",
"charge":-2,
"formula":"C15H21N3O15P2",
"notes":{
"original_bigg_ids":[
"cdp4dh6doglc_c"
]
},
"annotation":{
"bigg.metabolite":[
"cdp4dh6doglc"
],
"biocyc":[
"META:CPD-658"
],
"chebi":[
"CHEBI:20863",
"CHEBI:13262",
"CHEBI:3264",
"CHEBI:17494",
"CHEBI:58166"
],
"inchi_key":[
"PUBYMNIINUUJLL-JOCQNMFKSA-L"
],
"kegg.compound":[
"C01219"
],
"metanetx.chemical":[
"MNXM1370"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00897"
]
}
},
{
"id":"ca2_e",
"name":"Calcium",
"compartment":"e",
"charge":2,
"formula":"Ca",
"notes":{
"original_bigg_ids":[
"ca2_e"
]
},
"annotation":{
"bigg.metabolite":[
"ca2"
],
"biocyc":[
"META:CA+2"
],
"chebi":[
"CHEBI:29108",
"CHEBI:48760",
"CHEBI:39123",
"CHEBI:22988",
"CHEBI:3308"
],
"hmdb":[
"HMDB00464"
],
"inchi_key":[
"BHPQYMZQTOCNFJ-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00076"
],
"metanetx.chemical":[
"MNXM128"
],
"reactome.compound":[
"111875",
"167012",
"139827",
"74016",
"74112",
"1606834",
"2855229"
],
"sabiork":[
"1289"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29674",
"cpd00063"
]
}
},
{
"id":"adn_c",
"name":"Adenosine",
"compartment":"c",
"charge":0,
"formula":"C10H13N5O4",
"notes":{
"original_bigg_ids":[
"adn_c"
]
},
"annotation":{
"bigg.metabolite":[
"adn"
],
"biocyc":[
"META:ADENOSINE"
],
"chebi":[
"CHEBI:22237",
"CHEBI:13734",
"CHEBI:40558",
"CHEBI:16335",
"CHEBI:40906",
"CHEBI:40911",
"CHEBI:40825",
"CHEBI:2472"
],
"hmdb":[
"HMDB04402",
"HMDB00050",
"HMDB04421",
"HMDB04401"
],
"inchi_key":[
"OIRDTQYFTABQOQ-KQYNXXCUSA-N"
],
"kegg.compound":[
"C00212"
],
"kegg.drug":[
"D00045"
],
"metanetx.chemical":[
"MNXM212"
],
"reactome.compound":[
"83908",
"83909",
"8857850"
],
"sabiork":[
"1402"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00182"
]
}
},
{
"id":"sucr_c",
"name":"Sucrose C12H22O11",
"compartment":"c",
"charge":0,
"formula":"C12H22O11",
"notes":{
"original_bigg_ids":[
"sucr_c"
]
},
"annotation":{
"bigg.metabolite":[
"sucr"
],
"biocyc":[
"META:SUCROSE"
],
"chebi":[
"CHEBI:9314",
"CHEBI:15128",
"CHEBI:17992",
"CHEBI:45795",
"CHEBI:26812"
],
"hmdb":[
"HMDB00258"
],
"inchi_key":[
"CZMRCDWAGMRECN-UGDNZRGBSA-N"
],
"kegg.compound":[
"C00089"
],
"kegg.drug":[
"D00025"
],
"kegg.glycan":[
"G00370"
],
"metanetx.chemical":[
"MNXM167"
],
"reactome.compound":[
"188980"
],
"sabiork":[
"1294"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00076"
]
}
},
{
"id":"4pasp_c",
"name":"4-Phospho-L-aspartate",
"compartment":"c",
"charge":-2,
"formula":"C4H6NO7P",
"notes":{
"original_bigg_ids":[
"4pasp_c"
]
},
"annotation":{
"bigg.metabolite":[
"4pasp"
],
"biocyc":[
"META:L-BETA-ASPARTYL-P"
],
"chebi":[
"CHEBI:13062",
"CHEBI:12042",
"CHEBI:20471",
"CHEBI:21246",
"CHEBI:1925",
"CHEBI:20472",
"CHEBI:30407",
"CHEBI:15836",
"CHEBI:57535"
],
"hmdb":[
"HMDB12250"
],
"inchi_key":[
"IXZNKTPIYKDIGG-REOHCLBHSA-L"
],
"kegg.compound":[
"C03082"
],
"metanetx.chemical":[
"MNXM1177"
],
"sabiork":[
"1733"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01977"
]
}
},
{
"id":"nh4_e",
"name":"Ammonium",
"compartment":"e",
"charge":1,
"formula":"H4N",
"notes":{
"original_bigg_ids":[
"nh4_e"
]
},
"annotation":{
"bigg.metabolite":[
"nh4"
],
"biocyc":[
"META:AMMONIUM",
"META:AMMONIA"
],
"chebi":[
"CHEBI:44284",
"CHEBI:135980",
"CHEBI:22533",
"CHEBI:13406",
"CHEBI:29337",
"CHEBI:29340",
"CHEBI:13771",
"CHEBI:16134",
"CHEBI:28938",
"CHEBI:22534",
"CHEBI:13405",
"CHEBI:49783",
"CHEBI:7434",
"CHEBI:7435",
"CHEBI:44269",
"CHEBI:44404",
"CHEBI:13407"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/96667bd9-aeae-4e8f-89d3-100d0396af05",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/41e4c903-407f-49f7-bf6b-0a94d39fa3a7",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/27a89bdf-42f7-478f-91d8-e39881581096"
],
"hmdb":[
"HMDB00051",
"HMDB41827"
],
"inchi_key":[
"QGZKDVFQNNGYKY-UHFFFAOYSA-O"
],
"kegg.compound":[
"C00014",
"C01342"
],
"kegg.drug":[
"D02916",
"D02915"
],
"metanetx.chemical":[
"MNXM15"
],
"reactome.compound":[
"5693978",
"1132163",
"29382",
"76230",
"140912",
"389843",
"2022135",
"31633",
"113561"
],
"sabiork":[
"1268",
"43"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19013",
"cpd00013"
]
}
},
{
"id":"ocdca_c",
"name":"Octadecanoate (n-C18:0)",
"compartment":"c",
"charge":-1,
"formula":"C18H35O2",
"notes":{
"original_bigg_ids":[
"ocdca_c"
]
},
"annotation":{
"bigg.metabolite":[
"ocdca"
],
"biocyc":[
"META:STEARIC_ACID"
],
"chebi":[
"CHEBI:25631",
"CHEBI:231588",
"CHEBI:45710",
"CHEBI:25629",
"CHEBI:28842"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/c0fae385-4844-4700-ba7a-96b6726ed216"
],
"hmdb":[
"HMDB00827"
],
"inchi_key":[
"QIQXTHQIDYTFRH-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01530"
],
"kegg.drug":[
"D00119"
],
"lipidmaps":[
"LMFA01010018",
"LMFA01010047"
],
"metanetx.chemical":[
"MNXM236"
],
"reactome.compound":[
"428198"
],
"sabiork":[
"20032"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01080"
],
"slm":[
"000000826"
]
}
},
{
"id":"arg__L_e",
"name":"L-Arginine",
"compartment":"e",
"charge":1,
"formula":"C6H15N4O2",
"notes":{
"original_bigg_ids":[
"arg__L_e"
]
},
"annotation":{
"bigg.metabolite":[
"arg__L"
],
"biocyc":[
"META:ARG"
],
"chebi":[
"CHEBI:32683",
"CHEBI:22616",
"CHEBI:2643",
"CHEBI:32681",
"CHEBI:13077",
"CHEBI:32682",
"CHEBI:16467",
"CHEBI:21235",
"CHEBI:42927",
"CHEBI:6185",
"CHEBI:32696",
"CHEBI:32695",
"CHEBI:29016",
"CHEBI:32697",
"CHEBI:133495"
],
"hmdb":[
"HMDB62762",
"HMDB00517"
],
"inchi_key":[
"ODKSFYDXXFIFQN-BYPYZUCNSA-O"
],
"kegg.compound":[
"C02385",
"C00062"
],
"kegg.drug":[
"D02982"
],
"metanetx.chemical":[
"MNXM70"
],
"reactome.compound":[
"351977",
"29468",
"374064",
"113530"
],
"sabiork":[
"2410",
"23080",
"80"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00051",
"cpd19021"
]
}
},
{
"id":"3php_c",
"name":"3-Phosphohydroxypyruvate",
"compartment":"c",
"charge":-3,
"formula":"C3H2O7P",
"notes":{
"original_bigg_ids":[
"3php_c"
]
},
"annotation":{
"bigg.metabolite":[
"3php"
],
"biocyc":[
"META:3-P-HYDROXYPYRUVATE"
],
"chebi":[
"CHEBI:11883",
"CHEBI:11884",
"CHEBI:18110",
"CHEBI:1661",
"CHEBI:20192",
"CHEBI:20191",
"CHEBI:30933"
],
"hmdb":[
"HMDB60175",
"HMDB01024"
],
"inchi_key":[
"LFLUCDOSQPJJBE-UHFFFAOYSA-K"
],
"kegg.compound":[
"C03232"
],
"metanetx.chemical":[
"MNXM541"
],
"reactome.compound":[
"977329"
],
"sabiork":[
"2712"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02069"
]
}
},
{
"id":"ppbng_c",
"name":"Porphobilinogen",
"compartment":"c",
"charge":-1,
"formula":"C10H13N2O4",
"notes":{
"original_bigg_ids":[
"ppbng_c"
]
},
"annotation":{
"bigg.metabolite":[
"ppbng"
],
"biocyc":[
"META:PORPHOBILINOGEN"
],
"chebi":[
"CHEBI:58126",
"CHEBI:8335",
"CHEBI:14867",
"CHEBI:26212",
"CHEBI:44832",
"CHEBI:17381"
],
"hmdb":[
"HMDB00245"
],
"inchi_key":[
"QSHWIQZFGQKFMA-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00931"
],
"metanetx.chemical":[
"MNXM554"
],
"reactome.compound":[
"189464"
],
"sabiork":[
"5324"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00689"
]
}
},
{
"id":"gln__L_e",
"name":"L-Glutamine",
"compartment":"e",
"charge":0,
"formula":"C5H10N2O3",
"notes":{
"original_bigg_ids":[
"gln__L_e"
]
},
"annotation":{
"bigg.metabolite":[
"gln__L"
],
"biocyc":[
"META:GLN"
],
"chebi":[
"CHEBI:42943",
"CHEBI:42899",
"CHEBI:32679",
"CHEBI:32678",
"CHEBI:58359",
"CHEBI:28300",
"CHEBI:42812",
"CHEBI:13110",
"CHEBI:18050",
"CHEBI:32666",
"CHEBI:6227",
"CHEBI:32665",
"CHEBI:21308",
"CHEBI:42814",
"CHEBI:5432",
"CHEBI:24316"
],
"hmdb":[
"HMDB00641"
],
"inchi_key":[
"ZDXPYRJPNDTMRX-VKHMYHEASA-N"
],
"kegg.compound":[
"C00064",
"C00303"
],
"kegg.drug":[
"D00015"
],
"metanetx.chemical":[
"MNXM37"
],
"reactome.compound":[
"113522",
"212615",
"29472"
],
"sabiork":[
"2011",
"74"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00253",
"cpd00053"
]
}
},
{
"id":"ocdcal_c",
"name":"Octadecanal C18H36O",
"compartment":"c",
"charge":0,
"formula":"C18H36O",
"notes":{
"original_bigg_ids":[
"ocdcal_c"
]
},
"annotation":{
"bigg.metabolite":[
"ocdcal"
],
"biocyc":[
"META:CPD-55"
],
"chebi":[
"CHEBI:17034",
"CHEBI:25628",
"CHEBI:7722",
"CHEBI:14679"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/3fb4f754-803f-460b-8b57-f426fa760c37"
],
"hmdb":[
"HMDB02384"
],
"inchi_key":[
"FWWQKRXKHIRPJY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C01838"
],
"lipidmaps":[
"LMFA06000098"
],
"metanetx.chemical":[
"MNXM2269"
],
"sabiork":[
"2323"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01264"
]
}
},
{
"id":"mn2_e",
"name":"Manganese",
"compartment":"e",
"charge":2,
"formula":"Mn",
"notes":{
"original_bigg_ids":[
"mn2_e"
]
},
"annotation":{
"bigg.metabolite":[
"mn2"
],
"biocyc":[
"META:MN+2"
],
"chebi":[
"CHEBI:21435",
"CHEBI:25156",
"CHEBI:29035",
"CHEBI:49749"
],
"hmdb":[
"HMDB01333"
],
"inchi_key":[
"WAEMQWOKJMHJLA-UHFFFAOYSA-N"
],
"kegg.compound":[
"C19610"
],
"metanetx.chemical":[
"MNXM2255"
],
"reactome.compound":[
"29418",
"1981162"
],
"sabiork":[
"1279"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd20863",
"cpd00030"
]
}
},
{
"id":"hco3_e",
"name":"Bicarbonate",
"compartment":"e",
"charge":-1,
"formula":"CHO3",
"notes":{
"original_bigg_ids":[
"hco3_e"
]
},
"annotation":{
"bigg.metabolite":[
"hco3"
],
"biocyc":[
"META:CO3",
"META:H2CO3",
"META:HCO3"
],
"chebi":[
"CHEBI:13363",
"CHEBI:41605",
"CHEBI:13351",
"CHEBI:29201",
"CHEBI:22863",
"CHEBI:3401",
"CHEBI:23017",
"CHEBI:23744",
"CHEBI:40961",
"CHEBI:41609",
"CHEBI:17544",
"CHEBI:28976",
"CHEBI:5589"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/c78c72b7-2f2b-4dde-9f3d-80bb61a1da3e",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/34be09c7-8615-4ee1-806a-6a93ae28d922"
],
"hmdb":[
"HMDB03538",
"HMDB00595",
"HMDB31453"
],
"inchi_key":[
"BVKZGUZCCUSVTD-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01353",
"C00288"
],
"metanetx.chemical":[
"MNXM60"
],
"reactome.compound":[
"29896",
"425425",
"111627"
],
"sabiork":[
"1916",
"2275"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00242"
]
}
},
{
"id":"mg2_e",
"name":"Magnesium",
"compartment":"e",
"charge":2,
"formula":"Mg",
"notes":{
"original_bigg_ids":[
"mg2_e"
]
},
"annotation":{
"bigg.metabolite":[
"mg2"
],
"biocyc":[
"META:MG+2"
],
"chebi":[
"CHEBI:6635",
"CHEBI:18420",
"CHEBI:13379",
"CHEBI:39127",
"CHEBI:25112",
"CHEBI:49736"
],
"hmdb":[
"HMDB00547"
],
"inchi_key":[
"JLVVSXFLKOJNIY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00305"
],
"metanetx.chemical":[
"MNXM653"
],
"reactome.compound":[
"29926",
"114632",
"5336432",
"109496"
],
"sabiork":[
"1327"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00254"
]
}
},
{
"id":"acorn_c",
"name":"N2-Acetyl-L-ornithine",
"compartment":"c",
"charge":0,
"formula":"C7H14N2O3",
"notes":{
"original_bigg_ids":[
"acorn_c"
]
},
"annotation":{
"bigg.metabolite":[
"acorn"
],
"biocyc":[
"META:N-ALPHA-ACETYLORNITHINE"
],
"chebi":[
"CHEBI:21814",
"CHEBI:7368",
"CHEBI:16543",
"CHEBI:57805",
"CHEBI:40771",
"CHEBI:12634"
],
"hmdb":[
"HMDB06489",
"HMDB03357"
],
"inchi_key":[
"JRLGPAXAGHMNOL-LURJTMIESA-N"
],
"kegg.compound":[
"C00437"
],
"metanetx.chemical":[
"MNXM817"
],
"sabiork":[
"2048"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00342"
]
}
},
{
"id":"ile__L_c",
"name":"L-Isoleucine",
"compartment":"c",
"charge":0,
"formula":"C6H13NO2",
"notes":{
"original_bigg_ids":[
"ile__L_c"
]
},
"annotation":{
"bigg.metabolite":[
"ile__L"
],
"biocyc":[
"META:ILE"
],
"chebi":[
"CHEBI:43290",
"CHEBI:32604",
"CHEBI:43342",
"CHEBI:32605",
"CHEBI:17191",
"CHEBI:21344",
"CHEBI:13127",
"CHEBI:43366",
"CHEBI:6255",
"CHEBI:32613",
"CHEBI:32612",
"CHEBI:24898",
"CHEBI:58045"
],
"hmdb":[
"HMDB00172"
],
"inchi_key":[
"AGPKZVBTJJNPAG-WHFBIAKZSA-N"
],
"kegg.compound":[
"C00407"
],
"kegg.drug":[
"D00065"
],
"lipidmaps":[
"LMFA01100047"
],
"metanetx.chemical":[
"MNXM231"
],
"reactome.compound":[
"30102",
"113537"
],
"sabiork":[
"70",
"23116"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00322"
]
}
},
{
"id":"3c3hmp_c",
"name":"3-Carboxy-3-hydroxy-4-methylpentanoate",
"compartment":"c",
"charge":-2,
"formula":"C7H10O5",
"notes":{
"original_bigg_ids":[
"3c3hmp_c"
]
},
"annotation":{
"bigg.metabolite":[
"3c3hmp"
],
"biocyc":[
"META:3-CARBOXY-3-HYDROXY-ISOCAPROATE"
],
"chebi":[
"CHEBI:35128",
"CHEBI:1178"
],
"hmdb":[
"HMDB00402"
],
"inchi_key":[
"BITYXLXUCSKTJS-ZETCQYMHSA-L"
],
"kegg.compound":[
"C02504"
],
"lipidmaps":[
"LMFA01170083"
],
"metanetx.chemical":[
"MNXM985"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01646"
]
}
},
{
"id":"hpdcn_c",
"name":"Heptadecane",
"compartment":"c",
"charge":0,
"formula":"C17H36",
"notes":{
"original_bigg_ids":[
"hpdcn_c"
]
},
"annotation":{
"bigg.metabolite":[
"hpdcn"
],
"sbo":"SBO:0000247"
}
},
{
"id":"phthr_c",
"name":"O-Phospho-4-hydroxy-L-threonine",
"compartment":"c",
"charge":-2,
"formula":"C4H8NO7P",
"notes":{
"original_bigg_ids":[
"phthr_c"
]
},
"annotation":{
"bigg.metabolite":[
"phthr"
],
"biocyc":[
"META:4-PHOSPHONOOXY-THREONINE"
],
"chebi":[
"CHEBI:58452",
"CHEBI:21963",
"CHEBI:18336",
"CHEBI:11945",
"CHEBI:7690",
"CHEBI:59459"
],
"hmdb":[
"HMDB06802"
],
"inchi_key":[
"FKHAKIJOKDGEII-GBXIJSLDSA-L"
],
"kegg.compound":[
"C06055"
],
"metanetx.chemical":[
"MNXM759"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd22119",
"cpd03607"
]
}
},
{
"id":"cynt_c",
"name":"Cyanate",
"compartment":"c",
"charge":-1,
"formula":"CNO",
"notes":{
"original_bigg_ids":[
"cynt_c"
]
},
"annotation":{
"bigg.metabolite":[
"cynt"
],
"biocyc":[
"META:CPD-69"
],
"chebi":[
"CHEBI:29202",
"CHEBI:3968",
"CHEBI:14037",
"CHEBI:23419",
"CHEBI:29195",
"CHEBI:23422",
"CHEBI:28024"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/20a1ab57-2ac5-44c6-8390-60706fcc3fa1"
],
"hmdb":[
"HMDB02078"
],
"inchi_key":[
"XLJMAIOERFSOGZ-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01417"
],
"metanetx.chemical":[
"MNXM1191"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01015"
]
}
},
{
"id":"ptrc_e",
"name":"Putrescine",
"compartment":"e",
"charge":2,
"formula":"C4H14N2",
"notes":{
"original_bigg_ids":[
"ptrc_e"
]
},
"annotation":{
"bigg.metabolite":[
"ptrc"
],
"biocyc":[
"META:PUTRESCINE"
],
"chebi":[
"CHEBI:8650",
"CHEBI:17148",
"CHEBI:45092",
"CHEBI:26405",
"CHEBI:14972",
"CHEBI:326268"
],
"hmdb":[
"HMDB01414",
"HMDB60243"
],
"inchi_key":[
"KIDHWZJUCRJVML-UHFFFAOYSA-P"
],
"kegg.compound":[
"C00134"
],
"metanetx.chemical":[
"MNXM118"
],
"reactome.compound":[
"29610",
"141350"
],
"sabiork":[
"1941"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00118",
"cpd12215"
]
}
},
{
"id":"1hdecg3p_c",
"name":"1-hexadecanoyl-sn-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C19H37O7P",
"notes":{
"original_bigg_ids":[
"1hdecg3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"1hdecg3p"
],
"metanetx.chemical":[
"MNXM90586"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15327"
]
}
},
{
"id":"fe2_e",
"name":"Fe2+ mitochondria",
"compartment":"e",
"charge":2,
"formula":"Fe",
"notes":{
"original_bigg_ids":[
"fe2_e"
]
},
"annotation":{
"bigg.metabolite":[
"fe2"
],
"biocyc":[
"META:FE+2"
],
"chebi":[
"CHEBI:29033",
"CHEBI:49599",
"CHEBI:13321",
"CHEBI:21129",
"CHEBI:13319",
"CHEBI:24876",
"CHEBI:34754"
],
"hmdb":[
"HMDB00692"
],
"inchi_key":[
"CWYNVVGOOAEACU-UHFFFAOYSA-N"
],
"kegg.compound":[
"C14818"
],
"metanetx.chemical":[
"MNXM111"
],
"sabiork":[
"1275"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd10515"
]
}
},
{
"id":"1hdec9eg3p_c",
"name":"1-hexadec-9-enoyl-sn-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C19H35O7P",
"notes":{
"original_bigg_ids":[
"1hdec9eg3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"1hdec9eg3p"
],
"metanetx.chemical":[
"MNXM91047"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15326"
]
}
},
{
"id":"cu2_e",
"name":"Copper",
"compartment":"e",
"charge":2,
"formula":"Cu",
"notes":{
"original_bigg_ids":[
"cu2_e"
]
},
"annotation":{
"bigg.metabolite":[
"cu2"
],
"biocyc":[
"META:CU+2"
],
"chebi":[
"CHEBI:29036",
"CHEBI:23380",
"CHEBI:49550",
"CHEBI:20882"
],
"hmdb":[
"HMDB00657"
],
"inchi_key":[
"JPVYNHNXODAKFH-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00070"
],
"metanetx.chemical":[
"MNXM632"
],
"reactome.compound":[
"437295",
"936901",
"209799"
],
"sabiork":[
"19"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00058"
]
}
},
{
"id":"pqh2_c",
"name":"Plastoquinol",
"compartment":"c",
"charge":0,
"formula":"C53H82O2",
"notes":{
"original_bigg_ids":[
"pqh2_c"
]
},
"annotation":{
"bigg.metabolite":[
"pqh2"
],
"metanetx.chemical":[
"MNXM145595"
],
"sbo":"SBO:0000247"
}
},
{
"id":"k_e",
"name":"Potassium",
"compartment":"e",
"charge":1,
"formula":"K",
"notes":{
"original_bigg_ids":[
"k_e"
]
},
"annotation":{
"bigg.metabolite":[
"k"
],
"biocyc":[
"META:K+"
],
"chebi":[
"CHEBI:26219",
"CHEBI:29103",
"CHEBI:8345",
"CHEBI:49685"
],
"hmdb":[
"HMDB00586"
],
"inchi_key":[
"NPYPAHLBTDXSSS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00238"
],
"kegg.drug":[
"D08403"
],
"metanetx.chemical":[
"MNXM95"
],
"reactome.compound":[
"74126",
"5626313",
"29804"
],
"sabiork":[
"21"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00205"
]
}
},
{
"id":"cthzp_c",
"name":"4-Methyl-5-[2-(phosphonooxy)ethyl]-1,3-thiazole-2-carboxylate",
"compartment":"c",
"charge":-3,
"formula":"C7H7NO6PS",
"notes":{
"original_bigg_ids":[
"cthzp_c"
]
},
"annotation":{
"bigg.metabolite":[
"cthzp"
],
"sbo":"SBO:0000247"
}
},
{
"id":"1odec9eg3p_c",
"name":"1-octadec-9-enoyl-sn-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C21H39O7P",
"notes":{
"original_bigg_ids":[
"1odec9eg3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"1odec9eg3p"
],
"metanetx.chemical":[
"MNXM145555"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30087"
]
}
},
{
"id":"no3_e",
"name":"Nitrate",
"compartment":"e",
"charge":-1,
"formula":"NO3",
"notes":{
"original_bigg_ids":[
"no3_e"
]
},
"annotation":{
"bigg.metabolite":[
"no3"
],
"biocyc":[
"META:NITRATE",
"META:CPD-15028"
],
"chebi":[
"CHEBI:44487",
"CHEBI:14654",
"CHEBI:71263",
"CHEBI:7580",
"CHEBI:17632",
"CHEBI:48107",
"CHEBI:25545"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/706be27f-b4cf-4022-b2ef-04cec5197ca5"
],
"hmdb":[
"HMDB02878",
"HMDB01853"
],
"inchi_key":[
"NHNBFGGVMKEFGY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00244"
],
"kegg.drug":[
"D02313"
],
"metanetx.chemical":[
"MNXM207"
],
"sabiork":[
"1988"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00209"
]
}
},
{
"id":"pa160_c",
"name":"1,2-dihexadecanoyl-sn-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C35H67O8P",
"notes":{
"original_bigg_ids":[
"pa160_c"
]
},
"annotation":{
"bigg.metabolite":[
"pa160"
],
"biocyc":[
"META:CPD0-1422"
],
"chebi":[
"CHEBI:72859",
"CHEBI:73246"
],
"hmdb":[
"HMDB00674",
"HMDB07857"
],
"inchi_key":[
"PORPENFLTBBHSG-MGBGTMOVSA-L"
],
"lipidmaps":[
"LMGP10010027"
],
"metanetx.chemical":[
"MNXM17312"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd26147",
"cpd15524"
],
"slm":[
"000000808"
]
}
},
{
"id":"fe3_e",
"name":"Iron (Fe3+)",
"compartment":"e",
"charge":3,
"formula":"Fe",
"notes":{
"original_bigg_ids":[
"fe3_e"
]
},
"annotation":{
"bigg.metabolite":[
"fe3"
],
"biocyc":[
"META:FE+3"
],
"chebi":[
"CHEBI:49595",
"CHEBI:13320",
"CHEBI:24877",
"CHEBI:21130",
"CHEBI:29034",
"CHEBI:34755"
],
"hmdb":[
"HMDB12943"
],
"inchi_key":[
"VTLYFUHAOXGGBS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C14819"
],
"metanetx.chemical":[
"MNXM196"
],
"reactome.compound":[
"917966",
"111736",
"917943",
"912519",
"912516"
],
"sabiork":[
"1361"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd10516"
]
}
},
{
"id":"dna5mtc_c",
"name":"DNA 5-methylcytosine",
"compartment":"c",
"charge":0,
"formula":"CH3R",
"notes":{
"original_bigg_ids":[
"dna5mtc_c"
]
},
"annotation":{
"bigg.metabolite":[
"dna5mtc"
],
"biocyc":[
"META:5-Methylcytosine-DNA"
],
"chebi":[
"CHEBI:4295",
"CHEBI:13306",
"CHEBI:17493"
],
"kegg.compound":[
"C02967"
],
"metanetx.chemical":[
"MNXM14908"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12223"
]
}
},
{
"id":"dna_c",
"name":"DNA",
"compartment":"c",
"charge":0,
"formula":"RH",
"notes":{
"original_bigg_ids":[
"dna_c"
]
},
"annotation":{
"bigg.metabolite":[
"dna"
],
"biocyc":[
"META:DNA-Holder"
],
"chebi":[
"CHEBI:4291",
"CHEBI:13302",
"CHEBI:16991",
"CHEBI:21123",
"CHEBI:33698"
],
"kegg.compound":[
"C00039"
],
"metanetx.chemical":[
"MNXM634"
],
"reactome.compound":[
"29428"
],
"sabiork":[
"1770"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11461"
]
}
},
{
"id":"pa1619Z160_c",
"name":"1-9-Hexadecenoyl-2-Hexadecanoyl-sn-glycerol-3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C35H65O8P",
"notes":{
"original_bigg_ids":[
"pa1619Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"pa1619Z160"
],
"sbo":"SBO:0000247"
}
},
{
"id":"14glucan_c",
"name":"1,4-alpha-D-glucan",
"compartment":"c",
"charge":0,
"formula":"C6H11O5R",
"notes":{
"original_bigg_ids":[
"14glucan_c"
]
},
"annotation":{
"bigg.metabolite":[
"14glucan"
],
"biocyc":[
"META:1-4-alpha-D-Glucan"
],
"metanetx.chemical":[
"MNXM2905"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd21754"
]
}
},
{
"id":"mobd_e",
"name":"Molybdate",
"compartment":"e",
"charge":-2,
"formula":"MoO4",
"notes":{
"original_bigg_ids":[
"mobd_e"
]
},
"annotation":{
"bigg.metabolite":[
"mobd"
],
"biocyc":[
"META:CPD-3"
],
"chebi":[
"CHEBI:36263",
"CHEBI:25368",
"CHEBI:36264",
"CHEBI:25371",
"CHEBI:6967"
],
"hmdb":[
"HMDB12260"
],
"inchi_key":[
"MEFBJEMVZONFCJ-UHFFFAOYSA-N"
],
"kegg.compound":[
"C06232"
],
"metanetx.chemical":[
"MNXM1026"
],
"reactome.compound":[
"947561"
],
"sabiork":[
"8470"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11574"
]
}
},
{
"id":"ni2_e",
"name":"Nickel",
"compartment":"e",
"charge":2,
"formula":"Ni",
"notes":{
"original_bigg_ids":[
"ni2_e"
]
},
"annotation":{
"bigg.metabolite":[
"ni2"
],
"biocyc":[
"META:NI+2"
],
"chebi":[
"CHEBI:25517",
"CHEBI:49785",
"CHEBI:49786"
],
"hmdb":[
"HMDB02457"
],
"inchi_key":[
"VEQPNABPJHWNSG-UHFFFAOYSA-N"
],
"kegg.compound":[
"C19609"
],
"metanetx.chemical":[
"MNXM3673"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd20862"
]
}
},
{
"id":"pa161_c",
"name":"1,2-dihexadec-9-enoyl-sn-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C35H63O8P",
"notes":{
"original_bigg_ids":[
"pa161_c"
]
},
"annotation":{
"bigg.metabolite":[
"pa161"
],
"metanetx.chemical":[
"MNXM90510"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15525"
]
}
},
{
"id":"na1_e",
"name":"Sodium",
"compartment":"e",
"charge":1,
"formula":"Na",
"notes":{
"original_bigg_ids":[
"na1_e"
]
},
"annotation":{
"bigg.metabolite":[
"na1"
],
"biocyc":[
"META:NA+"
],
"chebi":[
"CHEBI:9175",
"CHEBI:49766",
"CHEBI:26717",
"CHEBI:29101"
],
"hmdb":[
"HMDB00588"
],
"inchi_key":[
"FKNQFGJONOIPTF-UHFFFAOYSA-N"
],
"kegg.compound":[
"C01330"
],
"metanetx.chemical":[
"MNXM27"
],
"reactome.compound":[
"2892454",
"83910",
"74113",
"425977",
"425971",
"2872443",
"425958"
],
"sabiork":[
"22"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00971"
]
}
},
{
"id":"cobalt2_p",
"name":"Co2+",
"compartment":"p",
"charge":2,
"formula":"Co",
"notes":{
"original_bigg_ids":[
"cobalt2_p"
]
},
"annotation":{
"bigg.metabolite":[
"cobalt2"
],
"biocyc":[
"META:CO+2"
],
"chebi":[
"CHEBI:48828",
"CHEBI:48827",
"CHEBI:23337"
],
"hmdb":[
"HMDB00608"
],
"inchi_key":[
"XLJKHNWPARRRJB-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00175"
],
"metanetx.chemical":[
"MNXM90960"
],
"sabiork":[
"23"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00149"
]
}
},
{
"id":"pa1819Z1619Z_c",
"name":"1-(9Z)-octadecenoyl,2-(9Z)-hexadecenoyl-sn-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C37H67O8P",
"notes":{
"original_bigg_ids":[
"pa1819Z1619Z_c"
]
},
"annotation":{
"bigg.metabolite":[
"pa1819Z1619Z"
],
"metanetx.chemical":[
"MNXM147356"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30437"
]
}
},
{
"id":"cynt_e",
"name":"Cyanate",
"compartment":"e",
"charge":-1,
"formula":"CNO",
"notes":{
"original_bigg_ids":[
"cynt_e"
]
},
"annotation":{
"bigg.metabolite":[
"cynt"
],
"biocyc":[
"META:CPD-69"
],
"chebi":[
"CHEBI:29202",
"CHEBI:3968",
"CHEBI:14037",
"CHEBI:23419",
"CHEBI:29195",
"CHEBI:23422",
"CHEBI:28024"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/20a1ab57-2ac5-44c6-8390-60706fcc3fa1"
],
"hmdb":[
"HMDB02078"
],
"inchi_key":[
"XLJMAIOERFSOGZ-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01417"
],
"metanetx.chemical":[
"MNXM1191"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01015"
]
}
},
{
"id":"pa1819Z160_c",
"name":"1-(9Z)-octadecenoyl,2-hexadecanoyl-sn-glycerol 3-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C37H69O8P",
"notes":{
"original_bigg_ids":[
"pa1819Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"pa1819Z160"
],
"metanetx.chemical":[
"MNXM145698"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30435"
]
}
},
{
"id":"co2_p",
"name":"CO2 CO2",
"compartment":"p",
"charge":0,
"formula":"CO2",
"notes":{
"original_bigg_ids":[
"co2_p"
]
},
"annotation":{
"bigg.metabolite":[
"co2"
],
"biocyc":[
"META:CARBON-DIOXIDE"
],
"chebi":[
"CHEBI:23011",
"CHEBI:3283",
"CHEBI:48829",
"CHEBI:16526",
"CHEBI:13283",
"CHEBI:13285",
"CHEBI:13284",
"CHEBI:13282"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2ec3da94-5f50-4525-81b1-5607c5c7a3d3",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/05f60af4-0a3f-4ead-9a29-33bb0f123379"
],
"hmdb":[
"HMDB01967"
],
"inchi_key":[
"CURLTUGMZLYLDI-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00011"
],
"kegg.drug":[
"D00004"
],
"metanetx.chemical":[
"MNXM13"
],
"reactome.compound":[
"29376",
"5668565",
"189480",
"1132345",
"113528",
"1237009",
"159751",
"389536",
"159942"
],
"sabiork":[
"1266"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00011"
]
}
},
{
"id":"h_e",
"name":"H+",
"compartment":"e",
"charge":1,
"formula":"H",
"notes":{
"original_bigg_ids":[
"h_e"
]
},
"annotation":{
"bigg.metabolite":[
"h"
],
"biocyc":[
"META:PROTON"
],
"chebi":[
"CHEBI:5584",
"CHEBI:13357",
"CHEBI:15378",
"CHEBI:10744"
],
"hmdb":[
"HMDB59597"
],
"inchi_key":[
"GPRLSGONYQIRFK-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00080"
],
"metanetx.chemical":[
"MNXM1"
],
"reactome.compound":[
"2000349",
"425978",
"74722",
"428040",
"427899",
"428548",
"156540",
"70106",
"425969",
"1132304",
"5668577",
"1470067",
"163953",
"193465",
"113529",
"351626",
"425999",
"194688",
"374900",
"2872447",
"372511"
],
"sabiork":[
"39"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00067"
]
}
},
{
"id":"na1_p",
"name":"Sodium",
"compartment":"p",
"charge":1,
"formula":"Na",
"notes":{
"original_bigg_ids":[
"na1_p"
]
},
"annotation":{
"bigg.metabolite":[
"na1"
],
"biocyc":[
"META:NA+"
],
"chebi":[
"CHEBI:9175",
"CHEBI:49766",
"CHEBI:26717",
"CHEBI:29101"
],
"hmdb":[
"HMDB00588"
],
"inchi_key":[
"FKNQFGJONOIPTF-UHFFFAOYSA-N"
],
"kegg.compound":[
"C01330"
],
"metanetx.chemical":[
"MNXM27"
],
"reactome.compound":[
"2892454",
"83910",
"74113",
"425977",
"425971",
"2872443",
"425958"
],
"sabiork":[
"22"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00971"
]
}
},
{
"id":"zn2_p",
"name":"Zinc",
"compartment":"p",
"charge":2,
"formula":"Zn",
"notes":{
"original_bigg_ids":[
"zn2_p"
]
},
"annotation":{
"bigg.metabolite":[
"zn2"
],
"biocyc":[
"META:ZN+2"
],
"chebi":[
"CHEBI:49982",
"CHEBI:49972",
"CHEBI:29105",
"CHEBI:27368",
"CHEBI:10113"
],
"hmdb":[
"HMDB01303"
],
"inchi_key":[
"PTFCDOFLOPIGGS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00038"
],
"metanetx.chemical":[
"MNXM149"
],
"reactome.compound":[
"216667",
"437093",
"29426",
"216785",
"435350",
"442320",
"158417"
],
"sabiork":[
"1281"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00034"
]
}
},
{
"id":"so4_p",
"name":"Sulfate",
"compartment":"p",
"charge":-2,
"formula":"O4S",
"notes":{
"original_bigg_ids":[
"so4_p"
]
},
"annotation":{
"bigg.metabolite":[
"so4"
],
"biocyc":[
"META:SULFATE",
"META:HSO4"
],
"chebi":[
"CHEBI:15135",
"CHEBI:45693",
"CHEBI:29199",
"CHEBI:9335",
"CHEBI:16189",
"CHEBI:45687",
"CHEBI:26836",
"CHEBI:45696"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/cf4fcd19-f2cb-4d92-aa67-323762e3b269"
],
"hmdb":[
"HMDB01448"
],
"inchi_key":[
"QAOWNCQODCNURD-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00059"
],
"kegg.drug":[
"D05963"
],
"metanetx.chemical":[
"MNXM58"
],
"reactome.compound":[
"174375",
"1606845",
"1609649",
"1614584",
"427648"
],
"sabiork":[
"1759"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29301",
"cpd00048"
]
}
},
{
"id":"spmd_p",
"name":"Spermidine",
"compartment":"p",
"charge":3,
"formula":"C7H22N3",
"notes":{
"original_bigg_ids":[
"spmd_p"
]
},
"annotation":{
"bigg.metabolite":[
"spmd"
],
"biocyc":[
"META:SPERMIDINE"
],
"chebi":[
"CHEBI:57834",
"CHEBI:15097",
"CHEBI:26732",
"CHEBI:26733",
"CHEBI:9218",
"CHEBI:45647",
"CHEBI:15095",
"CHEBI:16610"
],
"hmdb":[
"HMDB01257"
],
"inchi_key":[
"ATHGHQPFGPMSJY-UHFFFAOYSA-Q"
],
"kegg.compound":[
"C00315"
],
"metanetx.chemical":[
"MNXM124"
],
"reactome.compound":[
"204635",
"141324"
],
"sabiork":[
"3088"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00264"
]
}
},
{
"id":"pi_e",
"name":"Phosphate",
"compartment":"e",
"charge":-2,
"formula":"HO4P",
"notes":{
"original_bigg_ids":[
"pi_e"
]
},
"annotation":{
"bigg.metabolite":[
"pi"
],
"biocyc":[
"META:Pi",
"META:CPD-16459",
"META:PHOSPHATE-GROUP"
],
"chebi":[
"CHEBI:26078",
"CHEBI:18367",
"CHEBI:29139",
"CHEBI:39739",
"CHEBI:43470",
"CHEBI:35780",
"CHEBI:43474",
"CHEBI:26020",
"CHEBI:45024",
"CHEBI:39745",
"CHEBI:29137",
"CHEBI:14791",
"CHEBI:7793"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/db5219ee-60cb-4370-b066-340c9faf069c",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/84684967-eade-48d4-b25d-c4aede0a0836",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/ad82c39b-2edb-4953-b971-79a2d2ea6e26",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/aac01fea-4223-49c1-8b12-cd50f11ebfc8",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/c581b2ce-6238-45de-abc0-60ca8d47ed04"
],
"hmdb":[
"HMDB02105",
"HMDB00973",
"HMDB01429",
"HMDB02142",
"HMDB05947"
],
"inchi_key":[
"NBIIXXVUZAFLBC-UHFFFAOYSA-L"
],
"kegg.compound":[
"C00009"
],
"kegg.drug":[
"D05467"
],
"metanetx.chemical":[
"MNXM9"
],
"reactome.compound":[
"5228339",
"113550",
"8851513",
"113551",
"109277",
"29372",
"8851226",
"113548"
],
"sabiork":[
"36"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27787",
"cpd00009"
]
}
},
{
"id":"12dgr160_c",
"name":"1,2-Diacyl-sn-glycerol (dihexadecanoyl, n-C16:0)",
"compartment":"c",
"charge":0,
"formula":"C35H68O5",
"notes":{
"original_bigg_ids":[
"12dgr160_c"
]
},
"annotation":{
"bigg.metabolite":[
"12dgr160"
],
"metanetx.chemical":[
"MNXM3132"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dkmpp_c",
"name":"2,3-diketo-5-methylthio-1-phosphopentane",
"compartment":"c",
"charge":-2,
"formula":"C6H9O6PS",
"notes":{
"original_bigg_ids":[
"dkmpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dkmpp"
],
"biocyc":[
"META:CPD-8999"
],
"chebi":[
"CHEBI:58828",
"CHEBI:50604"
],
"hmdb":[
"HMDB62750",
"HMDB59620",
"HMDB60266"
],
"inchi_key":[
"HKEAOVFNWRDVAJ-UHFFFAOYSA-L"
],
"kegg.compound":[
"C15650"
],
"metanetx.chemical":[
"MNXM162358"
],
"reactome.compound":[
"1237176"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11295"
]
}
},
{
"id":"ca2_p",
"name":"Calcium",
"compartment":"p",
"charge":2,
"formula":"Ca",
"notes":{
"original_bigg_ids":[
"ca2_p"
]
},
"annotation":{
"bigg.metabolite":[
"ca2"
],
"biocyc":[
"META:CA+2"
],
"chebi":[
"CHEBI:29108",
"CHEBI:48760",
"CHEBI:39123",
"CHEBI:22988",
"CHEBI:3308"
],
"hmdb":[
"HMDB00464"
],
"inchi_key":[
"BHPQYMZQTOCNFJ-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00076"
],
"metanetx.chemical":[
"MNXM128"
],
"reactome.compound":[
"111875",
"167012",
"139827",
"74016",
"74112",
"1606834",
"2855229"
],
"sabiork":[
"1289"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd29674",
"cpd00063"
]
}
},
{
"id":"12dgr1619Z160_c",
"name":"1,2-Diacyl-sn-glycerol(16:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C35H66O5",
"notes":{
"original_bigg_ids":[
"12dgr1619Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"12dgr1619Z160"
],
"sbo":"SBO:0000247"
}
},
{
"id":"nh4_p",
"name":"Ammonium",
"compartment":"p",
"charge":1,
"formula":"H4N",
"notes":{
"original_bigg_ids":[
"nh4_p"
]
},
"annotation":{
"bigg.metabolite":[
"nh4"
],
"biocyc":[
"META:AMMONIUM",
"META:AMMONIA"
],
"chebi":[
"CHEBI:44284",
"CHEBI:135980",
"CHEBI:22533",
"CHEBI:13406",
"CHEBI:29337",
"CHEBI:29340",
"CHEBI:13771",
"CHEBI:16134",
"CHEBI:28938",
"CHEBI:22534",
"CHEBI:13405",
"CHEBI:49783",
"CHEBI:7434",
"CHEBI:7435",
"CHEBI:44269",
"CHEBI:44404",
"CHEBI:13407"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/96667bd9-aeae-4e8f-89d3-100d0396af05",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/41e4c903-407f-49f7-bf6b-0a94d39fa3a7",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/27a89bdf-42f7-478f-91d8-e39881581096"
],
"hmdb":[
"HMDB00051",
"HMDB41827"
],
"inchi_key":[
"QGZKDVFQNNGYKY-UHFFFAOYSA-O"
],
"kegg.compound":[
"C00014",
"C01342"
],
"kegg.drug":[
"D02916",
"D02915"
],
"metanetx.chemical":[
"MNXM15"
],
"reactome.compound":[
"5693978",
"1132163",
"29382",
"76230",
"140912",
"389843",
"2022135",
"31633",
"113561"
],
"sabiork":[
"1268",
"43"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19013",
"cpd00013"
]
}
},
{
"id":"dhmtp_c",
"name":"1,2-Dihydroxy-5-(methylthio)pent-1-en-3-one",
"compartment":"c",
"charge":0,
"formula":"C6H10O3S",
"notes":{
"original_bigg_ids":[
"dhmtp_c"
]
},
"annotation":{
"bigg.metabolite":[
"dhmtp"
],
"biocyc":[
"META:CPD-85"
],
"chebi":[
"CHEBI:49252",
"CHEBI:58795"
],
"hmdb":[
"HMDB12134"
],
"inchi_key":[
"CILXJJLQPTUUSS-XQRVVYSFSA-N"
],
"kegg.compound":[
"C15606"
],
"metanetx.chemical":[
"MNXM494"
],
"reactome.compound":[
"1237155"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11255"
]
}
},
{
"id":"2kmb_c",
"name":"2-keto-4-methylthiobutyrate",
"compartment":"c",
"charge":-1,
"formula":"C5H7O3S",
"notes":{
"original_bigg_ids":[
"2kmb_c"
]
},
"annotation":{
"bigg.metabolite":[
"2kmb"
],
"biocyc":[
"META:CPD-479"
],
"chebi":[
"CHEBI:43720",
"CHEBI:22458",
"CHEBI:1902",
"CHEBI:63388",
"CHEBI:16723",
"CHEBI:33574",
"CHEBI:12029",
"CHEBI:20451"
],
"hmdb":[
"HMDB01553",
"HMDB13210"
],
"inchi_key":[
"SXFSQZDSUWACKX-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01180"
],
"lipidmaps":[
"LMFA01060170"
],
"metanetx.chemical":[
"MNXM276"
],
"reactome.compound":[
"1237122"
],
"sabiork":[
"5424"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00869"
]
}
},
{
"id":"12dgr161_c",
"name":"1,2-Diacyl-sn-glycerol (dihexadec-9-enoyl, n-C16:1)",
"compartment":"c",
"charge":0,
"formula":"C35H64O5",
"notes":{
"original_bigg_ids":[
"12dgr161_c"
]
},
"annotation":{
"bigg.metabolite":[
"12dgr161"
],
"metanetx.chemical":[
"MNXM3774"
],
"sbo":"SBO:0000247"
}
},
{
"id":"arg__L_p",
"name":"L-Arginine",
"compartment":"p",
"charge":1,
"formula":"C6H15N4O2",
"notes":{
"original_bigg_ids":[
"arg__L_p"
]
},
"annotation":{
"bigg.metabolite":[
"arg__L"
],
"biocyc":[
"META:ARG"
],
"chebi":[
"CHEBI:32683",
"CHEBI:22616",
"CHEBI:2643",
"CHEBI:32681",
"CHEBI:13077",
"CHEBI:32682",
"CHEBI:16467",
"CHEBI:21235",
"CHEBI:42927",
"CHEBI:6185",
"CHEBI:32696",
"CHEBI:32695",
"CHEBI:29016",
"CHEBI:32697",
"CHEBI:133495"
],
"hmdb":[
"HMDB62762",
"HMDB00517"
],
"inchi_key":[
"ODKSFYDXXFIFQN-BYPYZUCNSA-O"
],
"kegg.compound":[
"C02385",
"C00062"
],
"kegg.drug":[
"D02982"
],
"metanetx.chemical":[
"MNXM70"
],
"reactome.compound":[
"351977",
"29468",
"374064",
"113530"
],
"sabiork":[
"2410",
"23080",
"80"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00051",
"cpd19021"
]
}
},
{
"id":"12dgr1819Z1619Z_c",
"name":"1,2-Diacyl-sn-glycerol (1-(9Z)-octadecenoyl,2-(9Z)-hexadecenoyl, 18:1(9Z)/16:1(9Z))",
"compartment":"c",
"charge":0,
"formula":"C37H68O5",
"notes":{
"original_bigg_ids":[
"12dgr1819Z1619Z_c"
]
},
"annotation":{
"bigg.metabolite":[
"12dgr1819Z1619Z"
],
"metanetx.chemical":[
"MNXM147343"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30071"
]
}
},
{
"id":"gln__L_p",
"name":"L-Glutamine",
"compartment":"p",
"charge":0,
"formula":"C5H10N2O3",
"notes":{
"original_bigg_ids":[
"gln__L_p"
]
},
"annotation":{
"bigg.metabolite":[
"gln__L"
],
"biocyc":[
"META:GLN"
],
"chebi":[
"CHEBI:42943",
"CHEBI:42899",
"CHEBI:32679",
"CHEBI:32678",
"CHEBI:58359",
"CHEBI:28300",
"CHEBI:42812",
"CHEBI:13110",
"CHEBI:18050",
"CHEBI:32666",
"CHEBI:6227",
"CHEBI:32665",
"CHEBI:21308",
"CHEBI:42814",
"CHEBI:5432",
"CHEBI:24316"
],
"hmdb":[
"HMDB00641"
],
"inchi_key":[
"ZDXPYRJPNDTMRX-VKHMYHEASA-N"
],
"kegg.compound":[
"C00064",
"C00303"
],
"kegg.drug":[
"D00015"
],
"metanetx.chemical":[
"MNXM37"
],
"reactome.compound":[
"113522",
"212615",
"29472"
],
"sabiork":[
"2011",
"74"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00253",
"cpd00053"
]
}
},
{
"id":"tczcaro_c",
"name":"9,15,9-tricis-zeta-Carotene",
"compartment":"c",
"charge":0,
"formula":"C40H60",
"notes":{
"original_bigg_ids":[
"tczcaro_c"
]
},
"annotation":{
"bigg.metabolite":[
"tczcaro"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dczcaro_c",
"name":"9,9-dicis-zeta-Carotene",
"compartment":"c",
"charge":0,
"formula":"C40H60",
"notes":{
"original_bigg_ids":[
"dczcaro_c"
]
},
"annotation":{
"bigg.metabolite":[
"dczcaro"
],
"sbo":"SBO:0000247"
}
},
{
"id":"mn2_p",
"name":"Manganese",
"compartment":"p",
"charge":2,
"formula":"Mn",
"notes":{
"original_bigg_ids":[
"mn2_p"
]
},
"annotation":{
"bigg.metabolite":[
"mn2"
],
"biocyc":[
"META:MN+2"
],
"chebi":[
"CHEBI:21435",
"CHEBI:25156",
"CHEBI:29035",
"CHEBI:49749"
],
"hmdb":[
"HMDB01333"
],
"inchi_key":[
"WAEMQWOKJMHJLA-UHFFFAOYSA-N"
],
"kegg.compound":[
"C19610"
],
"metanetx.chemical":[
"MNXM2255"
],
"reactome.compound":[
"29418",
"1981162"
],
"sabiork":[
"1279"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd20863",
"cpd00030"
]
}
},
{
"id":"12dgr1819Z160_c",
"name":"1,2-Diacyl-sn-glycerol (1-(9Z)-octadecenoyl,2-hexadecanoyl, 18:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C37H70O5",
"notes":{
"original_bigg_ids":[
"12dgr1819Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"12dgr1819Z160"
],
"metanetx.chemical":[
"MNXM146745"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30070"
]
}
},
{
"id":"hco3_p",
"name":"Bicarbonate",
"compartment":"p",
"charge":-1,
"formula":"CHO3",
"notes":{
"original_bigg_ids":[
"hco3_p"
]
},
"annotation":{
"bigg.metabolite":[
"hco3"
],
"biocyc":[
"META:CO3",
"META:H2CO3",
"META:HCO3"
],
"chebi":[
"CHEBI:13363",
"CHEBI:41605",
"CHEBI:13351",
"CHEBI:29201",
"CHEBI:22863",
"CHEBI:3401",
"CHEBI:23017",
"CHEBI:23744",
"CHEBI:40961",
"CHEBI:41609",
"CHEBI:17544",
"CHEBI:28976",
"CHEBI:5589"
],
"envipath":[
"4fd7f3e0-dd25-43ac-9453-dda3e52396e4/compound/c78c72b7-2f2b-4dde-9f3d-80bb61a1da3e",
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/34be09c7-8615-4ee1-806a-6a93ae28d922"
],
"hmdb":[
"HMDB03538",
"HMDB00595",
"HMDB31453"
],
"inchi_key":[
"BVKZGUZCCUSVTD-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01353",
"C00288"
],
"metanetx.chemical":[
"MNXM60"
],
"reactome.compound":[
"29896",
"425425",
"111627"
],
"sabiork":[
"1916",
"2275"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00242"
]
}
},
{
"id":"mg2_p",
"name":"Magnesium",
"compartment":"p",
"charge":2,
"formula":"Mg",
"notes":{
"original_bigg_ids":[
"mg2_p"
]
},
"annotation":{
"bigg.metabolite":[
"mg2"
],
"biocyc":[
"META:MG+2"
],
"chebi":[
"CHEBI:6635",
"CHEBI:18420",
"CHEBI:13379",
"CHEBI:39127",
"CHEBI:25112",
"CHEBI:49736"
],
"hmdb":[
"HMDB00547"
],
"inchi_key":[
"JLVVSXFLKOJNIY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00305"
],
"metanetx.chemical":[
"MNXM653"
],
"reactome.compound":[
"29926",
"114632",
"5336432",
"109496"
],
"sabiork":[
"1327"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00254"
]
}
},
{
"id":"ttclyco_c",
"name":"7,9,7,9-tetracis-Lycopene",
"compartment":"c",
"charge":0,
"formula":"C40H56",
"notes":{
"original_bigg_ids":[
"ttclyco_c"
]
},
"annotation":{
"bigg.metabolite":[
"ttclyco"
],
"sbo":"SBO:0000247"
}
},
{
"id":"phptna_c",
"name":"Pheophytin a",
"compartment":"c",
"charge":0,
"formula":"C55H74N4O5",
"notes":{
"original_bigg_ids":[
"phptna_c"
]
},
"annotation":{
"bigg.metabolite":[
"phptna"
],
"sbo":"SBO:0000247"
}
},
{
"id":"sqdg160_c",
"name":"Sulfoquinovosyldiacylglycerol (n-C16 0)",
"compartment":"c",
"charge":-1,
"formula":"C41H77O12S",
"notes":{
"original_bigg_ids":[
"sqdg160_c"
]
},
"annotation":{
"bigg.metabolite":[
"sqdg160"
],
"metanetx.chemical":[
"MNXM146235"
],
"sbo":"SBO:0000247"
}
},
{
"id":"phphbda_c",
"name":"Pheophorbide a",
"compartment":"c",
"charge":-1,
"formula":"C35H35N4O5",
"notes":{
"original_bigg_ids":[
"phphbda_c"
]
},
"annotation":{
"bigg.metabolite":[
"phphbda"
],
"biocyc":[
"META:CPD-7061"
],
"chebi":[
"CHEBI:38257",
"CHEBI:58687"
],
"inchi_key":[
"UXWYEAZHZLZDGM-ZVEVZSNKSA-M"
],
"kegg.compound":[
"C18021"
],
"metanetx.chemical":[
"MNXM91266"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd18004"
]
}
},
{
"id":"ptrc_p",
"name":"Putrescine",
"compartment":"p",
"charge":2,
"formula":"C4H14N2",
"notes":{
"original_bigg_ids":[
"ptrc_p"
]
},
"annotation":{
"bigg.metabolite":[
"ptrc"
],
"biocyc":[
"META:PUTRESCINE"
],
"chebi":[
"CHEBI:8650",
"CHEBI:17148",
"CHEBI:45092",
"CHEBI:26405",
"CHEBI:14972",
"CHEBI:326268"
],
"hmdb":[
"HMDB01414",
"HMDB60243"
],
"inchi_key":[
"KIDHWZJUCRJVML-UHFFFAOYSA-P"
],
"kegg.compound":[
"C00134"
],
"metanetx.chemical":[
"MNXM118"
],
"reactome.compound":[
"29610",
"141350"
],
"sabiork":[
"1941"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00118",
"cpd12215"
]
}
},
{
"id":"fe2_p",
"name":"Fe2+ mitochondria",
"compartment":"p",
"charge":2,
"formula":"Fe",
"notes":{
"original_bigg_ids":[
"fe2_p"
]
},
"annotation":{
"bigg.metabolite":[
"fe2"
],
"biocyc":[
"META:FE+2"
],
"chebi":[
"CHEBI:29033",
"CHEBI:49599",
"CHEBI:13321",
"CHEBI:21129",
"CHEBI:13319",
"CHEBI:24876",
"CHEBI:34754"
],
"hmdb":[
"HMDB00692"
],
"inchi_key":[
"CWYNVVGOOAEACU-UHFFFAOYSA-N"
],
"kegg.compound":[
"C14818"
],
"metanetx.chemical":[
"MNXM111"
],
"sabiork":[
"1275"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd10515"
]
}
},
{
"id":"sqdg1619Z160_c",
"name":"Sulfoquinovosyl diacylglycerol(16:1(9Z)/16:0)",
"compartment":"c",
"charge":-1,
"formula":"C41H75O12S",
"notes":{
"original_bigg_ids":[
"sqdg1619Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"sqdg1619Z160"
],
"sbo":"SBO:0000247"
}
},
{
"id":"cu2_p",
"name":"Copper",
"compartment":"p",
"charge":2,
"formula":"Cu",
"notes":{
"original_bigg_ids":[
"cu2_p"
]
},
"annotation":{
"bigg.metabolite":[
"cu2"
],
"biocyc":[
"META:CU+2"
],
"chebi":[
"CHEBI:29036",
"CHEBI:23380",
"CHEBI:49550",
"CHEBI:20882"
],
"hmdb":[
"HMDB00657"
],
"inchi_key":[
"JPVYNHNXODAKFH-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00070"
],
"metanetx.chemical":[
"MNXM632"
],
"reactome.compound":[
"437295",
"936901",
"209799"
],
"sabiork":[
"19"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00058"
]
}
},
{
"id":"phytol_c",
"name":"Phytol",
"compartment":"c",
"charge":0,
"formula":"C20H40O",
"notes":{
"original_bigg_ids":[
"phytol_c"
]
},
"annotation":{
"bigg.metabolite":[
"phytol"
],
"biocyc":[
"META:PHYTOL"
],
"chebi":[
"CHEBI:26121",
"CHEBI:17327",
"CHEBI:14836",
"CHEBI:8193"
],
"hmdb":[
"HMDB02019"
],
"inchi_key":[
"BOTWFXYSPFMFNR-PYDDKJGSSA-N"
],
"kegg.compound":[
"C01389"
],
"lipidmaps":[
"LMPR0104010002"
],
"metanetx.chemical":[
"MNXM2712"
],
"sabiork":[
"5552"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00999"
]
}
},
{
"id":"mgdg1619Z160_c",
"name":"1,2-Diacyl-3-O-galactosyl-sn-glycerol(16:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C41H76O10",
"notes":{
"original_bigg_ids":[
"mgdg1619Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"mgdg1619Z160"
],
"sbo":"SBO:0000247"
}
},
{
"id":"rcc_c",
"name":"Red chlorophyll catabolite",
"compartment":"c",
"charge":-1,
"formula":"C35H37N4O7",
"notes":{
"original_bigg_ids":[
"rcc_c"
]
},
"annotation":{
"bigg.metabolite":[
"rcc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dgdg1619Z160_c",
"name":"Digalactosyl-diacylglycerol(16:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C47H86O15",
"notes":{
"original_bigg_ids":[
"dgdg1619Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"dgdg1619Z160"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dgdg161_c",
"name":"Digalactosyl-diacylglycerol(n-C16 1)",
"compartment":"c",
"charge":0,
"formula":"C47H84O15",
"notes":{
"original_bigg_ids":[
"dgdg161_c"
]
},
"annotation":{
"bigg.metabolite":[
"dgdg161"
],
"metanetx.chemical":[
"MNXM147087"
],
"sbo":"SBO:0000247"
}
},
{
"id":"6pthp_c",
"name":"6-Pyruvoyl-5,6,7,8-tetrahydropterin",
"compartment":"c",
"charge":0,
"formula":"C9H11N5O3",
"notes":{
"original_bigg_ids":[
"6pthp_c"
]
},
"annotation":{
"bigg.metabolite":[
"6pthp"
],
"biocyc":[
"META:6-PYRUVOYL-5678-TETRAHYDROPTERIN"
],
"chebi":[
"CHEBI:136564",
"CHEBI:12236",
"CHEBI:17804",
"CHEBI:12235",
"CHEBI:12234",
"CHEBI:2235",
"CHEBI:20757"
],
"hmdb":[
"HMDB01195"
],
"inchi_key":[
"WBJZXBUVECZHCE-SCSAIBSYSA-N"
],
"kegg.compound":[
"C03684"
],
"metanetx.chemical":[
"MNXM722720"
],
"reactome.compound":[
"1474179"
],
"sabiork":[
"6793"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02315"
]
}
},
{
"id":"mgdg161_c",
"name":"1,2-Diacyl-3-beta-D-galactosyl-sn-glycerol (n-C16 1)",
"compartment":"c",
"charge":0,
"formula":"C41H74O10",
"notes":{
"original_bigg_ids":[
"mgdg161_c"
]
},
"annotation":{
"bigg.metabolite":[
"mgdg161"
],
"metanetx.chemical":[
"MNXM146469"
],
"sbo":"SBO:0000247"
}
},
{
"id":"thbpt_c",
"name":"Tetrahydrobiopterin",
"compartment":"c",
"charge":0,
"formula":"C9H15N5O3",
"notes":{
"original_bigg_ids":[
"thbpt_c"
]
},
"annotation":{
"bigg.metabolite":[
"thbpt"
],
"biocyc":[
"META:TETRA-H-BIOPTERIN",
"META:CPD-14053"
],
"chebi":[
"CHEBI:9480",
"CHEBI:15372",
"CHEBI:15219",
"CHEBI:26902",
"CHEBI:59560",
"CHEBI:64242",
"CHEBI:12074",
"CHEBI:136570",
"CHEBI:64491",
"CHEBI:43063"
],
"hmdb":[
"HMDB59658",
"HMDB02154",
"HMDB00787",
"HMDB00027"
],
"inchi_key":[
"FNKQXYHWGSIFBK-NHTYNGABSA-N"
],
"kegg.compound":[
"C00272"
],
"kegg.drug":[
"D08505"
],
"metanetx.chemical":[
"MNXM722714"
],
"reactome.compound":[
"29870"
],
"sabiork":[
"5027"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00233"
]
}
},
{
"id":"nstxan_c",
"name":"Nostoxanthin",
"compartment":"c",
"charge":0,
"formula":"C40H56O4",
"notes":{
"original_bigg_ids":[
"nstxan_c"
]
},
"annotation":{
"bigg.metabolite":[
"nstxan"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dgdg1819Z1619Z_c",
"name":"Digalactosyldiacylglycerol (1-(9Z)-octadecenoyl,2-(9Z)-hexadecenoyl, 18:1(9Z)/16:1(9Z))",
"compartment":"c",
"charge":0,
"formula":"C49H88O15",
"notes":{
"original_bigg_ids":[
"dgdg1819Z1619Z_c"
]
},
"annotation":{
"bigg.metabolite":[
"dgdg1819Z1619Z"
],
"metanetx.chemical":[
"MNXM146384"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30236"
]
}
},
{
"id":"chla_soret_exc_c",
"name":"Excited chlorophyll A, Soret band (short wavelength)",
"compartment":"c",
"charge":0,
"formula":"C55H72MgN4O5",
"notes":{
"original_bigg_ids":[
"chla_soret_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"chla_soret_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"gthbpt_c",
"name":"1-O-(L-erythro-biopterin-2-yl)-a-glucose",
"compartment":"c",
"charge":0,
"formula":"C15H25N5O8",
"notes":{
"original_bigg_ids":[
"gthbpt_c"
]
},
"annotation":{
"bigg.metabolite":[
"gthbpt"
],
"sbo":"SBO:0000247"
}
},
{
"id":"mgdg1819Z1619Z_c",
"name":"Monogalactosyldiacylglycerol (1-(9Z)-octadecenoyl,2-(9Z)-hexadecenoyl, 18:1(9Z)/16:1(9Z))",
"compartment":"c",
"charge":0,
"formula":"C43H78O10",
"notes":{
"original_bigg_ids":[
"mgdg1819Z1619Z_c"
]
},
"annotation":{
"bigg.metabolite":[
"mgdg1819Z1619Z"
],
"metanetx.chemical":[
"MNXM147159"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30372"
]
}
},
{
"id":"iscssh_c",
"name":"IscS with bound sulfur",
"compartment":"c",
"charge":-1,
"formula":"RS2",
"notes":{
"original_bigg_ids":[
"iscssh_c"
]
},
"annotation":{
"bigg.metabolite":[
"iscssh"
],
"metanetx.chemical":[
"MNXM146402"
],
"sbo":"SBO:0000247"
}
},
{
"id":"iscsh_c",
"name":"Thiamine biosynthesis intermediate 2",
"compartment":"c",
"charge":0,
"formula":"RSH",
"notes":{
"original_bigg_ids":[
"iscsh_c"
]
},
"annotation":{
"bigg.metabolite":[
"iscsh"
],
"sbo":"SBO:0000247"
}
},
{
"id":"bcaro_exc_c",
"name":"Excited beta-carotene",
"compartment":"c",
"charge":0,
"formula":"C40H56Z",
"notes":{
"original_bigg_ids":[
"bcaro_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"bcaro_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"phycy_exc_c",
"name":"Excited phycocyanin",
"compartment":"c",
"charge":-2,
"formula":"C33H36N4O6Z",
"notes":{
"original_bigg_ids":[
"phycy_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"phycy_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"allocy_exc_c",
"name":"Excited allocyanobilin (phycobilisome core)",
"compartment":"c",
"charge":-2,
"formula":"C33H36N4O6Z",
"notes":{
"original_bigg_ids":[
"allocy_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"allocy_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"cdp12dgr1819Z160_c",
"name":"CDP-1-(11Z)-octadecenoyl,2-hexadecanoyl-sn-glycerol",
"compartment":"c",
"charge":-2,
"formula":"C46H81N3O15P2",
"notes":{
"original_bigg_ids":[
"cdp12dgr1819Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"cdp12dgr1819Z160"
],
"metanetx.chemical":[
"MNXM146536"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30201"
]
}
},
{
"id":"allocy_c",
"name":"Allocyanobilin (phycobilisome core)",
"compartment":"c",
"charge":-2,
"formula":"C33H36N4O6",
"notes":{
"original_bigg_ids":[
"allocy_c"
]
},
"annotation":{
"bigg.metabolite":[
"allocy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"this_c",
"name":"Thiamine biosynthesis intermediate 1",
"compartment":"c",
"charge":-1,
"formula":"RCO2",
"notes":{
"original_bigg_ids":[
"this_c"
]
},
"annotation":{
"bigg.metabolite":[
"this"
],
"sbo":"SBO:0000247"
}
},
{
"id":"athis_c",
"name":"Thiamine biosynthesis intermediate 4",
"compartment":"c",
"charge":-1,
"formula":"C11H12N5O8PR",
"notes":{
"original_bigg_ids":[
"athis_c"
]
},
"annotation":{
"bigg.metabolite":[
"athis"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pgp1819Z160_c",
"name":"Phosphatidylglycerophosphate (1-(9Z)-octadecenoyl,2-hexadecanoyl, 18:1(9Z)/16:0)",
"compartment":"c",
"charge":-3,
"formula":"C40H75O13P2",
"notes":{
"original_bigg_ids":[
"pgp1819Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"pgp1819Z160"
],
"metanetx.chemical":[
"MNXM146611"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30498"
]
}
},
{
"id":"thissh_c",
"name":"Thiamine biosynthesis intermediate 5",
"compartment":"c",
"charge":-1,
"formula":"RCOS",
"notes":{
"original_bigg_ids":[
"thissh_c"
]
},
"annotation":{
"bigg.metabolite":[
"thissh"
],
"sbo":"SBO:0000247"
}
},
{
"id":"imgly_c",
"name":"Iminoglycine",
"compartment":"c",
"charge":0,
"formula":"C2H3NO2",
"notes":{
"original_bigg_ids":[
"imgly_c"
]
},
"annotation":{
"bigg.metabolite":[
"imgly"
],
"sbo":"SBO:0000247"
}
},
{
"id":"chla_qy1_exc_c",
"name":"Photosystem I excited chlorophyll A, Qy band (long wavelength)",
"compartment":"c",
"charge":0,
"formula":"C55H72MgN4O5",
"notes":{
"original_bigg_ids":[
"chla_qy1_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"chla_qy1_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pho_loss_c",
"name":"Photon energy loss (heat/fluorescence)",
"compartment":"c",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"pho_loss_c"
]
},
"annotation":{
"bigg.metabolite":[
"pho_loss"
],
"sbo":"SBO:0000247"
}
},
{
"id":"pg1819Z160_c",
"name":"Phosphatidylglycerol (1-(9Z)-octadecenoyl,2-hexadecanoyl, 18:1(9Z)/16:0)",
"compartment":"c",
"charge":-1,
"formula":"C40H76O10P",
"notes":{
"original_bigg_ids":[
"pg1819Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"pg1819Z160"
],
"metanetx.chemical":[
"MNXM146218"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30487"
]
}
},
{
"id":"u23ga2_c",
"name":"UDP-2,3-bis(3-hydroxyhexadecanoyl)glucosamine",
"compartment":"c",
"charge":-2,
"formula":"C47H83N3O20P2",
"notes":{
"original_bigg_ids":[
"u23ga2_c"
]
},
"annotation":{
"bigg.metabolite":[
"u23ga2"
],
"sbo":"SBO:0000247"
}
},
{
"id":"u3aga2_c",
"name":"UDP-3-O-(3-hydroxyhexadecanoyl)-N-acetylglucosamine",
"compartment":"c",
"charge":-2,
"formula":"C33H55N3O19P2",
"notes":{
"original_bigg_ids":[
"u3aga2_c"
]
},
"annotation":{
"bigg.metabolite":[
"u3aga2"
],
"sbo":"SBO:0000247"
}
},
{
"id":"2c4mthzep_c",
"name":"2-[(2R,5Z)-2-Carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate",
"compartment":"c",
"charge":-3,
"formula":"C7H7NO6PS",
"notes":{
"original_bigg_ids":[
"2c4mthzep_c"
]
},
"annotation":{
"bigg.metabolite":[
"2c4mthzep"
],
"sbo":"SBO:0000247"
}
},
{
"id":"sheme_c",
"name":"Siroheme C42H36FeN4O16",
"compartment":"c",
"charge":-8,
"formula":"C42H36FeN4O16",
"notes":{
"original_bigg_ids":[
"sheme_c"
]
},
"annotation":{
"bigg.metabolite":[
"sheme"
],
"biocyc":[
"META:SIROHEME"
],
"chebi":[
"CHEBI:9166",
"CHEBI:28599",
"CHEBI:26690",
"CHEBI:60052"
],
"inchi_key":[
"DLKSSIHHLYNIKN-QIISWYHFSA-D"
],
"kegg.compound":[
"C00748"
],
"metanetx.chemical":[
"MNXM82173"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00557"
]
}
},
{
"id":"glcdg1619Z160_c",
"name":"1,2-Diacyl-3-O-(beta-D-glucopyranosyl)-sn-glycerol(16:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C41H76O10",
"notes":{
"original_bigg_ids":[
"glcdg1619Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"glcdg1619Z160"
],
"sbo":"SBO:0000247"
}
},
{
"id":"malcoame_c",
"name":"Malonyl-CoA methyl ester",
"compartment":"c",
"charge":-4,
"formula":"C25H36N7O19P3S",
"notes":{
"original_bigg_ids":[
"malcoame_c"
]
},
"annotation":{
"bigg.metabolite":[
"malcoame"
],
"biocyc":[
"META:CPD-12454"
],
"chebi":[
"CHEBI:71244",
"CHEBI:71242"
],
"inchi_key":[
"CHQAJZULNPRMEN-FZEDXVDRSA-J"
],
"lipidmaps":[
"LMFA07050346"
],
"metanetx.chemical":[
"MNXM97130"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd20921"
]
}
},
{
"id":"ara5p_c",
"name":"D-Arabinose 5-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C5H9O8P",
"notes":{
"original_bigg_ids":[
"ara5p_c"
]
},
"annotation":{
"bigg.metabolite":[
"ara5p"
],
"biocyc":[
"META:ARABINOSE-5P"
],
"chebi":[
"CHEBI:12916",
"CHEBI:79058",
"CHEBI:57693",
"CHEBI:16241",
"CHEBI:4104",
"CHEBI:20915"
],
"hmdb":[
"HMDB11734"
],
"inchi_key":[
"PPQRONHOSHZGFQ-WDCZJNDASA-L"
],
"kegg.compound":[
"C01112"
],
"metanetx.chemical":[
"MNXM1184"
],
"sabiork":[
"25303",
"1478"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00817"
]
}
},
{
"id":"glcdg161_c",
"name":"1,2-Diacyl-3-O-(beta-D-glucopyranosyl)-sn-glycerol(16:1(9Z)/16:1(9Z))",
"compartment":"c",
"charge":0,
"formula":"C41H74O10",
"notes":{
"original_bigg_ids":[
"glcdg161_c"
]
},
"annotation":{
"bigg.metabolite":[
"glcdg161"
],
"sbo":"SBO:0000247"
}
},
{
"id":"kdo8p_c",
"name":"3-Deoxy-D-manno-octulosonate 8-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C8H12O11P",
"notes":{
"original_bigg_ids":[
"kdo8p_c"
]
},
"annotation":{
"bigg.metabolite":[
"kdo8p"
],
"biocyc":[
"META:KDO-8P"
],
"chebi":[
"CHEBI:18069",
"CHEBI:42115",
"CHEBI:1494",
"CHEBI:58368",
"CHEBI:11788",
"CHEBI:20006",
"CHEBI:85985",
"CHEBI:11552"
],
"inchi_key":[
"IZZNRKJLBIYBJN-HXUQBWEZSA-K"
],
"kegg.compound":[
"C04478"
],
"metanetx.chemical":[
"MNXM722774"
],
"sabiork":[
"7341"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02730"
]
}
},
{
"id":"ogmeACP_c",
"name":"3-Oxo-glutaryl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C6H7O4SR",
"notes":{
"original_bigg_ids":[
"ogmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"ogmeACP"
],
"metanetx.chemical":[
"MNXM147799"
],
"sbo":"SBO:0000247"
}
},
{
"id":"glcdg1819Z1619Z_c",
"name":"1,2-Diacyl-3-O-(beta-D-glucopyranosyl)-sn-glycerol(18:1(9Z)/16:1(9Z))",
"compartment":"c",
"charge":0,
"formula":"C43H78O10",
"notes":{
"original_bigg_ids":[
"glcdg1819Z1619Z_c"
]
},
"annotation":{
"bigg.metabolite":[
"glcdg1819Z1619Z"
],
"sbo":"SBO:0000247"
}
},
{
"id":"hgmeACP_c",
"name":"3-Hydroxyglutaryl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C6H9O4SR",
"notes":{
"original_bigg_ids":[
"hgmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"hgmeACP"
],
"biocyc":[
"META:3-Hydroxyglutaryl-ACP-methyl-ester"
],
"kegg.compound":[
"C20373"
],
"metanetx.chemical":[
"MNXM97395"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd22022"
]
}
},
{
"id":"kdo_c",
"name":"3-Deoxy-D-manno-2-octulosonate",
"compartment":"c",
"charge":-1,
"formula":"C8H13O8",
"notes":{
"original_bigg_ids":[
"kdo_c"
]
},
"annotation":{
"bigg.metabolite":[
"kdo"
],
"biocyc":[
"META:KDO"
],
"chebi":[
"CHEBI:43577",
"CHEBI:85986"
],
"inchi_key":[
"NNLZBVFSCVTSLA-HXUQBWEZSA-M"
],
"metanetx.chemical":[
"MNXM36403"
],
"sbo":"SBO:0000247"
}
},
{
"id":"glcdg1819Z160_c",
"name":"1,2-Diacyl-3-O-(beta-D-glucopyranosyl)-sn-glycerol(18:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C43H80O10",
"notes":{
"original_bigg_ids":[
"glcdg1819Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"glcdg1819Z160"
],
"sbo":"SBO:0000247"
}
},
{
"id":"ckdo_c",
"name":"CMP-3-deoxy-D-manno-octulosonate",
"compartment":"c",
"charge":-2,
"formula":"C17H24N3O15P",
"notes":{
"original_bigg_ids":[
"ckdo_c"
]
},
"annotation":{
"bigg.metabolite":[
"ckdo"
],
"biocyc":[
"META:CMP-KDO"
],
"chebi":[
"CHEBI:59825",
"CHEBI:86284",
"CHEBI:18014",
"CHEBI:20874",
"CHEBI:13275",
"CHEBI:85987",
"CHEBI:41566",
"CHEBI:3277"
],
"inchi_key":[
"YWWJKULNWGRYAS-UOVSKDHASA-L"
],
"kegg.compound":[
"C04121"
],
"metanetx.chemical":[
"MNXM535"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02546"
]
}
},
{
"id":"egmeACP_c",
"name":"Enoylglutaryl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C6H7O3SR",
"notes":{
"original_bigg_ids":[
"egmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"egmeACP"
],
"biocyc":[
"META:Enoylglutaryl-ACP-methyl-esters"
],
"kegg.compound":[
"C20374"
],
"metanetx.chemical":[
"MNXM11489"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27020"
]
}
},
{
"id":"mgdg1819Z160_c",
"name":"Monogalactosyldiacylglycerol (1-(9Z)-octadecenoyl,2-hexadecanoyl, 18:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C43H80O10",
"notes":{
"original_bigg_ids":[
"mgdg1819Z160_c"
]
},
"annotation":{
"bigg.metabolite":[
"mgdg1819Z160"
],
"metanetx.chemical":[
"MNXM146593"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30370"
]
}
},
{
"id":"gmeACP_c",
"name":"Glutaryl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C6H9O3SR",
"notes":{
"original_bigg_ids":[
"gmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"gmeACP"
],
"biocyc":[
"META:Glutaryl-ACP-methyl-esters"
],
"kegg.compound":[
"C20375"
],
"metanetx.chemical":[
"MNXM11700"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27180"
]
}
},
{
"id":"uacmam_c",
"name":"UDP-N-acetyl-D-mannosamine",
"compartment":"c",
"charge":-2,
"formula":"C17H25N3O17P2",
"notes":{
"original_bigg_ids":[
"uacmam_c"
]
},
"annotation":{
"bigg.metabolite":[
"uacmam"
],
"biocyc":[
"META:UDP-MANNAC"
],
"chebi":[
"CHEBI:13474",
"CHEBI:22116",
"CHEBI:57715",
"CHEBI:13457",
"CHEBI:68678",
"CHEBI:68623",
"CHEBI:9824",
"CHEBI:16287"
],
"hmdb":[
"HMDB13112"
],
"inchi_key":[
"LFTYTUAZOPRMMI-ZYQOOJPVSA-L"
],
"kegg.compound":[
"C01170"
],
"kegg.glycan":[
"G11112"
],
"metanetx.chemical":[
"MNXM722740"
],
"sabiork":[
"2263"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00861"
]
}
},
{
"id":"udcpp_c",
"name":"Undecaprenyl phosphate",
"compartment":"c",
"charge":-2,
"formula":"C55H89O4P",
"notes":{
"original_bigg_ids":[
"udcpp_c"
]
},
"annotation":{
"bigg.metabolite":[
"udcpp"
],
"biocyc":[
"META:UNDECAPRENYL-P"
],
"chebi":[
"CHEBI:15286",
"CHEBI:57654",
"CHEBI:15285",
"CHEBI:9864",
"CHEBI:16141"
],
"inchi_key":[
"UFPHFKCTOZIAFY-RDQGWRCRSA-L"
],
"kegg.compound":[
"C00348"
],
"lipidmaps":[
"LMPR03020006"
],
"metanetx.chemical":[
"MNXM251"
],
"sabiork":[
"2026"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00286"
]
}
},
{
"id":"opmeACP_c",
"name":"3-Oxo-pimeloyl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C8H11O4SR",
"notes":{
"original_bigg_ids":[
"opmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"opmeACP"
],
"metanetx.chemical":[
"MNXM147801"
],
"sbo":"SBO:0000247"
}
},
{
"id":"dgdg1819Z160Z_c",
"name":"Digalactosyl-diacylglycerol(18:1(9Z)/16:0)",
"compartment":"c",
"charge":0,
"formula":"C49H90O15",
"notes":{
"original_bigg_ids":[
"dgdg1819Z160Z_c"
]
},
"annotation":{
"bigg.metabolite":[
"dgdg1819Z160Z"
],
"sbo":"SBO:0000247"
}
},
{
"id":"hpmeACP_c",
"name":"3-Hydroxypimeloyl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C8H13O4SR",
"notes":{
"original_bigg_ids":[
"hpmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"hpmeACP"
],
"biocyc":[
"META:3-hydroxypimeloyl-ACP-methyl-esters"
],
"kegg.compound":[
"C20377"
],
"metanetx.chemical":[
"MNXM10038"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd22065"
]
}
},
{
"id":"unaga_c",
"name":"Undecaprenyl diphospho N-acetyl-glucosamine",
"compartment":"c",
"charge":-2,
"formula":"C63H103NO12P2",
"notes":{
"original_bigg_ids":[
"unaga_c"
]
},
"annotation":{
"bigg.metabolite":[
"unaga"
],
"biocyc":[
"META:ACETYL-D-GLUCOSAMINYLDIPHOSPHO-UNDECAPRE"
],
"chebi":[
"CHEBI:62958",
"CHEBI:62959"
],
"inchi_key":[
"NEVJGTXBHJNFAZ-JXCMATCVSA-L"
],
"kegg.compound":[
"C01289"
],
"metanetx.chemical":[
"MNXM1333"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00946"
]
}
},
{
"id":"glntrna_c",
"name":"L-Glutaminyl-tRNA(Gln)",
"compartment":"c",
"charge":1,
"formula":"C5H10N2O2R",
"notes":{
"original_bigg_ids":[
"glntrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"glntrna"
],
"chebi":[
"CHEBI:13112",
"CHEBI:5433",
"CHEBI:13344",
"CHEBI:29166"
],
"kegg.compound":[
"C02282"
],
"metanetx.chemical":[
"MNXM89810"
],
"reactome.compound":[
"379753",
"379772"
],
"sabiork":[
"3857"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12060"
]
}
},
{
"id":"kdolipid4cy_c",
"name":"KDO-lipid IV A (Synechococcus elongatus 7942)",
"compartment":"c",
"charge":-2,
"formula":"C84H155N2O27P",
"notes":{
"original_bigg_ids":[
"kdolipid4cy_c"
]
},
"annotation":{
"bigg.metabolite":[
"kdolipid4cy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"epmeACP_c",
"name":"Enoylpimeloyl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C8H11O3SR",
"notes":{
"original_bigg_ids":[
"epmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"epmeACP"
],
"biocyc":[
"META:Enoylpimeloyl-ACP-methyl-esters"
],
"kegg.compound":[
"C20378"
],
"metanetx.chemical":[
"MNXM11490"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27021"
]
}
},
{
"id":"trnagln_c",
"name":"TRNA(Gln)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnagln_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnagln"
],
"biocyc":[
"META:GLN-tRNAs"
],
"chebi":[
"CHEBI:29168",
"CHEBI:10679",
"CHEBI:15174"
],
"kegg.compound":[
"C01640"
],
"metanetx.chemical":[
"MNXM71"
],
"reactome.compound":[
"379740",
"379748"
],
"sabiork":[
"3836"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11911",
"cpd27100"
]
}
},
{
"id":"pmeACP_c",
"name":"Pimeloyl-[acyl-carrier protein] methyl ester",
"compartment":"c",
"charge":-1,
"formula":"C8H13O3SR",
"notes":{
"original_bigg_ids":[
"pmeACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"pmeACP"
],
"biocyc":[
"META:Pimeloyl-ACP-methyl-esters"
],
"kegg.compound":[
"C19846"
],
"metanetx.chemical":[
"MNXM12694"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd21088"
]
}
},
{
"id":"pimACP_c",
"name":"Pimeloyl-[acyl-carrier protein]",
"compartment":"c",
"charge":-1,
"formula":"C7H11O3SR",
"notes":{
"original_bigg_ids":[
"pimACP_c"
]
},
"annotation":{
"bigg.metabolite":[
"pimACP"
],
"biocyc":[
"META:Pimeloyl-ACPs"
],
"kegg.compound":[
"C19845"
],
"metanetx.chemical":[
"MNXM12695"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd21087"
]
}
},
{
"id":"meoh_c",
"name":"Methanol",
"compartment":"c",
"charge":0,
"formula":"CH4O1",
"notes":{
"original_bigg_ids":[
"meoh_c"
]
},
"annotation":{
"bigg.metabolite":[
"meoh"
],
"biocyc":[
"META:ALCOHOL-GROUP",
"META:METOH"
],
"chebi":[
"CHEBI:52090",
"CHEBI:25227",
"CHEBI:44080",
"CHEBI:17790",
"CHEBI:44553",
"CHEBI:14588",
"CHEBI:6816"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2c247069-759d-4108-ba1b-b1c81678bab7",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b5522308-bb5c-41bb-a11a-e9b9ae61da85"
],
"hmdb":[
"HMDB01875"
],
"inchi_key":[
"OKKJLVBELUTLKV-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00132"
],
"kegg.drug":[
"D02309"
],
"metanetx.chemical":[
"MNXM157"
],
"reactome.compound":[
"5693711",
"5359061"
],
"sabiork":[
"55"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00116"
]
}
},
{
"id":"unagam_c",
"name":"Undecaprenyl-diphospho-N-acetylglucosamine-N-acetylmannosamine",
"compartment":"c",
"charge":-2,
"formula":"C71H116N2O17P2",
"notes":{
"original_bigg_ids":[
"unagam_c"
]
},
"annotation":{
"bigg.metabolite":[
"unagam"
],
"sbo":"SBO:0000247"
}
},
{
"id":"icolipacy_c",
"name":"Inner core oligosaccharide lipid A (Synechococcus elongatus 7942)",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"icolipacy_c"
]
},
"annotation":{
"bigg.metabolite":[
"icolipacy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"icolipacy_p",
"name":"Inner core oligosaccharide lipid A (Synechococcus elongatus 7942)",
"compartment":"p",
"charge":0,
"notes":{
"original_bigg_ids":[
"icolipacy_p"
]
},
"annotation":{
"bigg.metabolite":[
"icolipacy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"trnatyr_c",
"name":"TRNA(Tyr)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnatyr_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnatyr"
],
"biocyc":[
"META:TYR-tRNAs"
],
"chebi":[
"CHEBI:10692",
"CHEBI:15189",
"CHEBI:29182"
],
"kegg.compound":[
"C00787"
],
"metanetx.chemical":[
"MNXM90668"
],
"reactome.compound":[
"379756",
"379743"
],
"sabiork":[
"3838"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11751"
]
}
},
{
"id":"oanticy_c",
"name":"O-antigen oligosaccharide (Synechococcus elongatus 7942)",
"compartment":"c",
"charge":0,
"notes":{
"original_bigg_ids":[
"oanticy_c"
]
},
"annotation":{
"bigg.metabolite":[
"oanticy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"8aonn_c",
"name":"8-Amino-7-oxononanoate",
"compartment":"c",
"charge":0,
"formula":"C9H17NO3",
"notes":{
"original_bigg_ids":[
"8aonn_c"
]
},
"annotation":{
"bigg.metabolite":[
"8aonn"
],
"biocyc":[
"META:8-AMINO-7-OXONONANOATE"
],
"chebi":[
"CHEBI:57532",
"CHEBI:15830",
"CHEBI:12266",
"CHEBI:20808",
"CHEBI:2308"
],
"hmdb":[
"HMDB37790"
],
"inchi_key":[
"GUAHPAJOXVYFON-UHFFFAOYSA-N"
],
"kegg.compound":[
"C01092"
],
"lipidmaps":[
"LMFA01100058",
"LMFA01060168"
],
"metanetx.chemical":[
"MNXM1141"
],
"sabiork":[
"5387"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00800"
]
}
},
{
"id":"dann_c",
"name":"7,8-Diaminononanoate",
"compartment":"c",
"charge":1,
"formula":"C9H21N2O2",
"notes":{
"original_bigg_ids":[
"dann_c"
]
},
"annotation":{
"bigg.metabolite":[
"dann"
],
"biocyc":[
"META:DIAMINONONANOATE"
],
"chebi":[
"CHEBI:12242",
"CHEBI:17830",
"CHEBI:20765",
"CHEBI:2247",
"CHEBI:58500"
],
"inchi_key":[
"KCEGBPIYGIWCDH-UHFFFAOYSA-O"
],
"kegg.compound":[
"C01037"
],
"lipidmaps":[
"LMFA01100062"
],
"metanetx.chemical":[
"MNXM1140"
],
"sabiork":[
"5370"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00764"
]
}
},
{
"id":"oanticy_p",
"name":"O-antigen oligosaccharide (Synechococcus elongatus 7942)",
"compartment":"p",
"charge":0,
"notes":{
"original_bigg_ids":[
"oanticy_p"
]
},
"annotation":{
"bigg.metabolite":[
"oanticy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"tyrtrna_c",
"name":"L-Tyrosyl-tRNA(Tyr)",
"compartment":"c",
"charge":1,
"formula":"C9H11NO2R",
"notes":{
"original_bigg_ids":[
"tyrtrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"tyrtrna"
],
"chebi":[
"CHEBI:13185",
"CHEBI:6318",
"CHEBI:29161"
],
"kegg.compound":[
"C02839"
],
"metanetx.chemical":[
"MNXM89822"
],
"reactome.compound":[
"379755",
"379785"
],
"sabiork":[
"3851"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12194"
]
}
},
{
"id":"colipacy_p",
"name":"O-antigen bound to core oligosaccharide lipid A (Synechococcus elongatus 7942)",
"compartment":"p",
"charge":0,
"notes":{
"original_bigg_ids":[
"colipacy_p"
]
},
"annotation":{
"bigg.metabolite":[
"colipacy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"amob_c",
"name":"S-Adenosyl-4-methylthio-2-oxobutanoate",
"compartment":"c",
"charge":0,
"formula":"C15H19N5O6S",
"notes":{
"original_bigg_ids":[
"amob_c"
]
},
"annotation":{
"bigg.metabolite":[
"amob"
],
"biocyc":[
"META:S-ADENOSYL-4-METHYLTHIO-2-OXOBUTANOATE"
],
"chebi":[
"CHEBI:12758",
"CHEBI:16490",
"CHEBI:8944",
"CHEBI:22033"
],
"inchi_key":[
"UOKVQQMBGVMXPU-CJPDYEHRSA-N"
],
"kegg.compound":[
"C04425"
],
"metanetx.chemical":[
"MNXM3090"
],
"sabiork":[
"7304"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02701"
]
}
},
{
"id":"trnamet_c",
"name":"TRNA(Met)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnamet_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnamet"
],
"biocyc":[
"META:Elongation-tRNAMet"
],
"chebi":[
"CHEBI:15182",
"CHEBI:10686",
"CHEBI:29173"
],
"kegg.compound":[
"C01647"
],
"metanetx.chemical":[
"MNXM90882"
],
"reactome.compound":[
"5603445",
"5603441",
"379741",
"379742"
],
"sabiork":[
"3849"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11918"
]
}
},
{
"id":"dtbt_c",
"name":"Dethiobiotin",
"compartment":"c",
"charge":-1,
"formula":"C10H17N2O3",
"notes":{
"original_bigg_ids":[
"dtbt_c"
]
},
"annotation":{
"bigg.metabolite":[
"dtbt"
],
"biocyc":[
"META:DETHIOBIOTIN"
],
"chebi":[
"CHEBI:42280",
"CHEBI:14132",
"CHEBI:36990",
"CHEBI:16691",
"CHEBI:42279",
"CHEBI:23649",
"CHEBI:4457",
"CHEBI:57861"
],
"hmdb":[
"HMDB03581"
],
"inchi_key":[
"AUTOLBMXDDTRRT-UHFFFAOYSA-M"
],
"kegg.compound":[
"C01909"
],
"metanetx.chemical":[
"MNXM1020"
],
"sabiork":[
"5879"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01311"
]
}
},
{
"id":"colipacy_e",
"name":"O-antigen bound to core oligosaccharide lipid A (Synechococcus elongatus 7942)",
"compartment":"e",
"charge":0,
"notes":{
"original_bigg_ids":[
"colipacy_e"
]
},
"annotation":{
"bigg.metabolite":[
"colipacy"
],
"sbo":"SBO:0000247"
}
},
{
"id":"mettrna_c",
"name":"L-Methionyl-tRNA (Met)",
"compartment":"c",
"charge":1,
"formula":"C5H11NOSR",
"notes":{
"original_bigg_ids":[
"mettrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"mettrna"
],
"kegg.compound":[
"C02430"
],
"metanetx.chemical":[
"MNXM90636"
],
"sabiork":[
"3852"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12105"
]
}
},
{
"id":"uaagmda_c",
"name":"Undecaprenyl-diphospho-N-acetylmuramoyl-(N-acetylglucosamine)-L-ala-D-glu-meso-2,6-diaminopimeloyl-D-ala-D-ala",
"compartment":"c",
"charge":-4,
"formula":"C95H152N8O28P2",
"notes":{
"original_bigg_ids":[
"uaagmda_c"
]
},
"annotation":{
"bigg.metabolite":[
"uaagmda"
],
"biocyc":[
"META:C6"
],
"chebi":[
"CHEBI:28138",
"CHEBI:61388",
"CHEBI:9870",
"CHEBI:27200"
],
"inchi_key":[
"OXJNZXDFVLDLEI-MBCYCBSHSA-J"
],
"kegg.compound":[
"C05898"
],
"kegg.glycan":[
"G10555"
],
"metanetx.chemical":[
"MNXM722781"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd03495"
]
}
},
{
"id":"btn_c",
"name":"Biotin",
"compartment":"c",
"charge":-1,
"formula":"C10H15N2O3S",
"notes":{
"original_bigg_ids":[
"btn_c"
]
},
"annotation":{
"bigg.metabolite":[
"btn"
],
"biocyc":[
"META:BIOTIN"
],
"chebi":[
"CHEBI:13905",
"CHEBI:57586",
"CHEBI:22884",
"CHEBI:3108",
"CHEBI:41236",
"CHEBI:15956",
"CHEBI:22882"
],
"hmdb":[
"HMDB00030"
],
"inchi_key":[
"YBJHBAHKTGYVGT-ZKWXMUAHSA-M"
],
"kegg.compound":[
"C00120"
],
"kegg.drug":[
"D00029"
],
"metanetx.chemical":[
"MNXM304"
],
"reactome.compound":[
"199238",
"29582",
"199207"
],
"sabiork":[
"1936"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00104"
]
}
},
{
"id":"trnaser_c",
"name":"TRNA(Ser)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaser_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaser"
],
"biocyc":[
"META:SER-tRNAs"
],
"chebi":[
"CHEBI:15186",
"CHEBI:29179",
"CHEBI:10689"
],
"kegg.compound":[
"C01650"
],
"metanetx.chemical":[
"MNXM91028"
],
"reactome.compound":[
"379761",
"379762"
],
"sabiork":[
"3848"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11921",
"cpd28152"
]
}
},
{
"id":"btamp_c",
"name":"Biotinyl 5  AMP C20H27N7O9PS",
"compartment":"c",
"charge":-1,
"formula":"C20H27N7O9PS",
"notes":{
"original_bigg_ids":[
"btamp_c"
]
},
"annotation":{
"bigg.metabolite":[
"btamp"
],
"inchi_key":[
"UTQCSTJVMLODHM-RHCAYAJFSA-N"
],
"metanetx.chemical":[
"MNXM722791"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd22432",
"cpd03517"
]
}
},
{
"id":"murein5p5p_p",
"name":"Two linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C80H124N16O42",
"notes":{
"original_bigg_ids":[
"murein5p5p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein5p5p"
],
"biocyc":[
"META:CPD0-2283"
],
"inchi_key":[
"WSONNHVKPYOZEY-UHFFFAOYSA-E"
],
"metanetx.chemical":[
"MNXM88345"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15511"
]
}
},
{
"id":"sertrna_c",
"name":"L-Seryl-tRNA(Ser)",
"compartment":"c",
"charge":1,
"formula":"C3H7NO2R",
"notes":{
"original_bigg_ids":[
"sertrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"sertrna"
],
"kegg.compound":[
"C02553"
],
"metanetx.chemical":[
"MNXM90842"
],
"sabiork":[
"3868"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12132"
]
}
},
{
"id":"murein5p5p5p_p",
"name":"Three linked disacharide pentapeptide murein units (uncrosslinked, middle of chain)",
"compartment":"p",
"charge":-6,
"formula":"C120H186N24O63",
"notes":{
"original_bigg_ids":[
"murein5p5p5p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein5p5p5p"
],
"inchi_key":[
"FOZGDVCGOFWZKF-SSRSPRHQSA-G"
],
"metanetx.chemical":[
"MNXM7807"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15512"
]
}
},
{
"id":"accp_c",
"name":"Apo-carboxylase",
"compartment":"c",
"charge":0,
"formula":"C7H13N3O2R2",
"notes":{
"original_bigg_ids":[
"accp_c"
]
},
"annotation":{
"bigg.metabolite":[
"accp"
],
"sbo":"SBO:0000247"
}
},
{
"id":"btnCCP_c",
"name":"Holo-[carboxylase]",
"compartment":"c",
"charge":0,
"formula":"C17H27N5O4SR2",
"notes":{
"original_bigg_ids":[
"btnCCP_c"
]
},
"annotation":{
"bigg.metabolite":[
"btnCCP"
],
"kegg.compound":[
"C06250"
],
"metanetx.chemical":[
"MNXM96075"
],
"sabiork":[
"8478"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12848"
]
}
},
{
"id":"glytrna_c",
"name":"Glycyl-tRNA(Gly)",
"compartment":"c",
"charge":1,
"formula":"C2H5NOR",
"notes":{
"original_bigg_ids":[
"glytrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"glytrna"
],
"chebi":[
"CHEBI:29156",
"CHEBI:14363",
"CHEBI:5503"
],
"kegg.compound":[
"C02412"
],
"metanetx.chemical":[
"MNXM89763"
],
"reactome.compound":[
"379781",
"379784"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12100"
]
}
},
{
"id":"ala__D_p",
"name":"D-Alanine",
"compartment":"p",
"charge":0,
"formula":"C3H7NO2",
"notes":{
"original_bigg_ids":[
"ala__D_p"
]
},
"annotation":{
"bigg.metabolite":[
"ala__D"
],
"biocyc":[
"META:D-ALANINE"
],
"chebi":[
"CHEBI:12899",
"CHEBI:57416",
"CHEBI:41798",
"CHEBI:10840",
"CHEBI:20893",
"CHEBI:4087",
"CHEBI:32435",
"CHEBI:41848",
"CHEBI:41756",
"CHEBI:41877",
"CHEBI:15570",
"CHEBI:32436"
],
"hmdb":[
"HMDB01310"
],
"inchi_key":[
"QNAYBMKLOCPYGJ-UWTATZPHSA-N"
],
"kegg.compound":[
"C00133"
],
"metanetx.chemical":[
"MNXM156"
],
"sabiork":[
"1940"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00117"
]
}
},
{
"id":"trnagly_c",
"name":"TRNA(Gly)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnagly_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnagly"
],
"biocyc":[
"META:GLY-tRNAs"
],
"chebi":[
"CHEBI:10681",
"CHEBI:15177",
"CHEBI:29176"
],
"kegg.compound":[
"C01642"
],
"metanetx.chemical":[
"MNXM90340"
],
"reactome.compound":[
"379766",
"379770"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11913",
"cpd27116"
]
}
},
{
"id":"murein5px4px4p_p",
"name":"Three disacharide linked murein units (pentapeptide crosslinked tetrapeptide (A2pm->D-ala) tetrapeptide corsslinked tetrapeptide (A2pm->D-ala)) (middle of chain)",
"compartment":"p",
"charge":-6,
"formula":"C114H172N22O59",
"notes":{
"original_bigg_ids":[
"murein5px4px4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein5px4px4p"
],
"biocyc":[
"META:CPD0-2296"
],
"inchi_key":[
"UVVIMBIDZMDRCG-UHFFFAOYSA-D"
],
"metanetx.chemical":[
"MNXM87121"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15515"
]
}
},
{
"id":"octapb_c",
"name":"Octanoate (protein bound)",
"compartment":"c",
"charge":1,
"formula":"C8H15O",
"notes":{
"original_bigg_ids":[
"octapb_c"
]
},
"annotation":{
"bigg.metabolite":[
"octapb"
],
"metanetx.chemical":[
"MNXM147531"
],
"sbo":"SBO:0000247"
}
},
{
"id":"protrna_c",
"name":"L-Prolyl-tRNA(Pro)",
"compartment":"c",
"charge":1,
"formula":"C5H9NOR",
"notes":{
"original_bigg_ids":[
"protrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"protrna"
],
"chebi":[
"CHEBI:6287",
"CHEBI:13155",
"CHEBI:29154"
],
"kegg.compound":[
"C02702"
],
"metanetx.chemical":[
"MNXM247"
],
"reactome.compound":[
"379746",
"379745"
],
"sabiork":[
"3863"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12164"
]
}
},
{
"id":"lipopb_c",
"name":"Lipoate (protein bound)",
"compartment":"c",
"charge":1,
"formula":"C8H13OS2",
"notes":{
"original_bigg_ids":[
"lipopb_c"
]
},
"annotation":{
"bigg.metabolite":[
"lipopb"
],
"metanetx.chemical":[
"MNXM147499"
],
"sbo":"SBO:0000247"
}
},
{
"id":"murein5px4p_p",
"name":"Two disacharide linked murein units, pentapeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C77H117N15O40",
"notes":{
"original_bigg_ids":[
"murein5px4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein5px4p"
],
"biocyc":[
"META:CPD0-2278"
],
"inchi_key":[
"NQXCJQVWBSGGNW-UHFFFAOYSA-E"
],
"metanetx.chemical":[
"MNXM88338"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15514"
]
}
},
{
"id":"trnapro_c",
"name":"TRNA(Pro)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnapro_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnapro"
],
"biocyc":[
"META:PRO-tRNAs"
],
"chebi":[
"CHEBI:15184",
"CHEBI:29177",
"CHEBI:10688"
],
"kegg.compound":[
"C01649"
],
"metanetx.chemical":[
"MNXM90667"
],
"reactome.compound":[
"379768",
"379775"
],
"sabiork":[
"3843"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11920"
]
}
},
{
"id":"alaala_p",
"name":"D-Alanyl-D-alanine",
"compartment":"p",
"charge":0,
"formula":"C6H12N2O3",
"notes":{
"original_bigg_ids":[
"alaala_p"
]
},
"annotation":{
"bigg.metabolite":[
"alaala"
],
"biocyc":[
"META:D-ALA-D-ALA"
],
"chebi":[
"CHEBI:13749",
"CHEBI:4088",
"CHEBI:16576",
"CHEBI:57822",
"CHEBI:12900",
"CHEBI:20894"
],
"hmdb":[
"HMDB03459"
],
"inchi_key":[
"DEFJQIDDEAULHB-QWWZWVQMSA-N"
],
"kegg.compound":[
"C00993"
],
"metanetx.chemical":[
"MNXM669"
],
"sabiork":[
"2204"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00731"
]
}
},
{
"id":"lipoate_c",
"name":"Lipoate",
"compartment":"c",
"charge":-1,
"formula":"C8H13O2S2",
"notes":{
"original_bigg_ids":[
"lipoate_c"
]
},
"annotation":{
"bigg.metabolite":[
"lipoate"
],
"biocyc":[
"META:LIPOIC-ACID"
],
"chebi":[
"CHEBI:43796",
"CHEBI:30313",
"CHEBI:25058",
"CHEBI:6492",
"CHEBI:83088",
"CHEBI:16494",
"CHEBI:30314",
"CHEBI:14519",
"CHEBI:30315",
"CHEBI:43790",
"CHEBI:146958",
"CHEBI:25056"
],
"hmdb":[
"HMDB01451",
"HMDB14312"
],
"inchi_key":[
"AGBQKNBQESQNJD-SSDOTTSWSA-M"
],
"kegg.compound":[
"C16241",
"C00725"
],
"kegg.drug":[
"D00086"
],
"lipidmaps":[
"LMFA01130001"
],
"metanetx.chemical":[
"MNXM1484"
],
"sabiork":[
"5201"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00541",
"cpd14958"
]
}
},
{
"id":"lipamp_c",
"name":"Lipoyl-adenylate",
"compartment":"c",
"charge":-1,
"formula":"C18H25N5O8PS2",
"notes":{
"original_bigg_ids":[
"lipamp_c"
]
},
"annotation":{
"bigg.metabolite":[
"lipamp"
],
"sbo":"SBO:0000247"
}
},
{
"id":"trnacys_c",
"name":"TRNA(Cys)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnacys_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnacys"
],
"biocyc":[
"META:CYS-tRNAs"
],
"chebi":[
"CHEBI:15173",
"CHEBI:10678",
"CHEBI:29167"
],
"kegg.compound":[
"C01639"
],
"metanetx.chemical":[
"MNXM162355"
],
"reactome.compound":[
"379725",
"379714"
],
"sabiork":[
"3834"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd26668",
"cpd11910"
]
}
},
{
"id":"meoh_p",
"name":"Methanol",
"compartment":"p",
"charge":0,
"formula":"CH4O1",
"notes":{
"original_bigg_ids":[
"meoh_p"
]
},
"annotation":{
"bigg.metabolite":[
"meoh"
],
"biocyc":[
"META:ALCOHOL-GROUP",
"META:METOH"
],
"chebi":[
"CHEBI:52090",
"CHEBI:25227",
"CHEBI:44080",
"CHEBI:17790",
"CHEBI:44553",
"CHEBI:14588",
"CHEBI:6816"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2c247069-759d-4108-ba1b-b1c81678bab7",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b5522308-bb5c-41bb-a11a-e9b9ae61da85"
],
"hmdb":[
"HMDB01875"
],
"inchi_key":[
"OKKJLVBELUTLKV-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00132"
],
"kegg.drug":[
"D02309"
],
"metanetx.chemical":[
"MNXM157"
],
"reactome.compound":[
"5693711",
"5359061"
],
"sabiork":[
"55"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00116"
]
}
},
{
"id":"murein5px3p_p",
"name":"Two disacharide linked murein units, pentapeptide corsslinked tripeptide (A2pm->A2pm) (middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C74H112N14O39",
"notes":{
"original_bigg_ids":[
"murein5px3p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein5px3p"
],
"metanetx.chemical":[
"MNXM5970"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15513"
]
}
},
{
"id":"cystrna_c",
"name":"L-Cysteinyl-tRNA(Cys)",
"compartment":"c",
"charge":1,
"formula":"C3H7NOSR",
"notes":{
"original_bigg_ids":[
"cystrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"cystrna"
],
"chebi":[
"CHEBI:74764",
"CHEBI:29152",
"CHEBI:6208",
"CHEBI:13096"
],
"kegg.compound":[
"C03125"
],
"metanetx.chemical":[
"MNXM155005"
],
"reactome.compound":[
"379713",
"379719"
],
"sabiork":[
"3855"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12255"
]
}
},
{
"id":"murein4px4p_p",
"name":"Two disacharide linked murein units, tetrapeptide corsslinked tetrapeptide (A2pm->D-ala) (middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C74H112N14O39",
"notes":{
"original_bigg_ids":[
"murein4px4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein4px4p"
],
"metanetx.chemical":[
"MNXM5316"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15506"
]
}
},
{
"id":"murein4px4px4p_p",
"name":"Three disacharide linked murein units (tetrapeptide crosslinked tetrapeptide (A2pm->D-ala) & tetrapeptide corsslinked tetrapeptide (A2pm->D-ala)) (middle of chain)",
"compartment":"p",
"charge":-6,
"formula":"C111H167N21O58",
"notes":{
"original_bigg_ids":[
"murein4px4px4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein4px4px4p"
],
"metanetx.chemical":[
"MNXM6451"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15508"
]
}
},
{
"id":"meoh_e",
"name":"Methanol",
"compartment":"e",
"charge":0,
"formula":"CH4O1",
"notes":{
"original_bigg_ids":[
"meoh_e"
]
},
"annotation":{
"bigg.metabolite":[
"meoh"
],
"biocyc":[
"META:ALCOHOL-GROUP",
"META:METOH"
],
"chebi":[
"CHEBI:52090",
"CHEBI:25227",
"CHEBI:44080",
"CHEBI:17790",
"CHEBI:44553",
"CHEBI:14588",
"CHEBI:6816"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/2c247069-759d-4108-ba1b-b1c81678bab7",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b5522308-bb5c-41bb-a11a-e9b9ae61da85"
],
"hmdb":[
"HMDB01875"
],
"inchi_key":[
"OKKJLVBELUTLKV-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00132"
],
"kegg.drug":[
"D02309"
],
"metanetx.chemical":[
"MNXM157"
],
"reactome.compound":[
"5693711",
"5359061"
],
"sabiork":[
"55"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00116"
]
}
},
{
"id":"trnaarg_c",
"name":"TRNA(Arg)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaarg_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaarg"
],
"biocyc":[
"META:ARG-tRNAs"
],
"chebi":[
"CHEBI:10673",
"CHEBI:29171",
"CHEBI:15167"
],
"kegg.compound":[
"C01636"
],
"metanetx.chemical":[
"MNXM90751"
],
"reactome.compound":[
"379704",
"379727"
],
"sabiork":[
"3837"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11907",
"cpd22281"
]
}
},
{
"id":"cph4_c",
"name":"6-carboxy-5,6,7,8-tetrahydropterin",
"compartment":"c",
"charge":-1,
"formula":"C7H8N5O3",
"notes":{
"original_bigg_ids":[
"cph4_c"
]
},
"annotation":{
"bigg.metabolite":[
"cph4"
],
"biocyc":[
"META:CPD0-1699"
],
"chebi":[
"CHEBI:61032",
"CHEBI:61126"
],
"hmdb":[
"HMDB60410"
],
"inchi_key":[
"QSIYONWVWDSRRO-UHFFFAOYSA-M"
],
"kegg.compound":[
"C20239"
],
"metanetx.chemical":[
"MNXM3194"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd21472"
]
}
},
{
"id":"murein5p4p_p",
"name":"Two linked disacharide pentapeptide and tetrapeptide murein units (uncrosslinked, middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C77H119N15O41",
"notes":{
"original_bigg_ids":[
"murein5p4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein5p4p"
],
"inchi_key":[
"YJNGRCZHKAYCMA-VZNOAHCOSA-E"
],
"metanetx.chemical":[
"MNXM5971"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15510"
]
}
},
{
"id":"argtrna_c",
"name":"L-Arginyl-tRNA(Arg)",
"compartment":"c",
"charge":2,
"formula":"C6H15N4OR",
"notes":{
"original_bigg_ids":[
"argtrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"argtrna"
],
"chebi":[
"CHEBI:18366",
"CHEBI:13079",
"CHEBI:13080",
"CHEBI:6189"
],
"kegg.compound":[
"C02163"
],
"metanetx.chemical":[
"MNXM89870"
],
"reactome.compound":[
"379720",
"379708"
],
"sabiork":[
"3858"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12036"
]
}
},
{
"id":"murein4p4p_p",
"name":"Two linked disacharide tetrapeptide murein units (uncrosslinked, middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C74H114N14O40",
"notes":{
"original_bigg_ids":[
"murein4p4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein4p4p"
],
"biocyc":[
"META:CPD0-2269"
],
"inchi_key":[
"VTZDBMVDVOTCFD-UHFFFAOYSA-G"
],
"metanetx.chemical":[
"MNXM88347"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15505"
]
}
},
{
"id":"cdg_c",
"name":"7-deaza-7-carboxyguanine",
"compartment":"c",
"charge":-1,
"formula":"C7H5N4O3",
"notes":{
"original_bigg_ids":[
"cdg_c"
]
},
"annotation":{
"bigg.metabolite":[
"cdg"
],
"biocyc":[
"META:CPD-13043"
],
"chebi":[
"CHEBI:61125",
"CHEBI:61036"
],
"inchi_key":[
"XIUIRSLBMMTDSK-UHFFFAOYSA-M"
],
"kegg.compound":[
"C20248"
],
"metanetx.chemical":[
"MNXM5026"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd21481"
]
}
},
{
"id":"trnatrp_c",
"name":"TRNA(Trp)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnatrp_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnatrp"
],
"biocyc":[
"META:TRP-tRNAs"
],
"chebi":[
"CHEBI:10691",
"CHEBI:15188",
"CHEBI:29181"
],
"kegg.compound":[
"C01652"
],
"metanetx.chemical":[
"MNXM90755"
],
"reactome.compound":[
"379774",
"379763"
],
"sabiork":[
"3839"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd28239",
"cpd11923"
]
}
},
{
"id":"preq0_c",
"name":"7-cyano-7-carbaguanine",
"compartment":"c",
"charge":0,
"formula":"C7H5N5O",
"notes":{
"original_bigg_ids":[
"preq0_c"
]
},
"annotation":{
"bigg.metabolite":[
"preq0"
],
"biocyc":[
"META:7-CYANO-7-DEAZAGUANINE"
],
"chebi":[
"CHEBI:45075",
"CHEBI:677358"
],
"inchi_key":[
"FMKSMYDYKXQYRV-UHFFFAOYSA-N"
],
"kegg.compound":[
"C15996"
],
"metanetx.chemical":[
"MNXM2207"
],
"sabiork":[
"28950"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd14718"
]
}
},
{
"id":"murein4p3p_p",
"name":"Two linked disacharide tetrapeptide and tripeptide murein units (uncrosslinked, middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C71H109N13O39",
"notes":{
"original_bigg_ids":[
"murein4p3p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein4p3p"
],
"inchi_key":[
"AKLORNSFZCNZDU-UHFFFAOYSA-H"
],
"metanetx.chemical":[
"MNXM88346"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15504"
]
}
},
{
"id":"trptrna_c",
"name":"L-Tryptophanyl-tRNA(Trp)",
"compartment":"c",
"charge":1,
"formula":"C11H12N2OR",
"notes":{
"original_bigg_ids":[
"trptrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"trptrna"
],
"chebi":[
"CHEBI:6312",
"CHEBI:13179",
"CHEBI:29159"
],
"kegg.compound":[
"C03512"
],
"metanetx.chemical":[
"MNXM89804"
],
"reactome.compound":[
"379765",
"379759"
],
"sabiork":[
"3859"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12336"
]
}
},
{
"id":"murein5p3p_p",
"name":"Two linked disacharide pentapeptide and tripeptide murein units (uncrosslinked, middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C74H114N14O40",
"notes":{
"original_bigg_ids":[
"murein5p3p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein5p3p"
],
"inchi_key":[
"SBOXLYQXPDGZLN-UHFFFAOYSA-G"
],
"metanetx.chemical":[
"MNXM5972"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15509"
]
}
},
{
"id":"murein3px4p_p",
"name":"Two disacharide linked murein units, tripeptide crosslinked tetrapeptide (A2pm->D-ala) (middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C71H107N13O38",
"notes":{
"original_bigg_ids":[
"murein3px4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein3px4p"
],
"biocyc":[
"META:CPD0-2273"
],
"inchi_key":[
"LOVDDQLBOGPFKC-UHFFFAOYSA-H"
],
"metanetx.chemical":[
"MNXM88341"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15503"
]
}
},
{
"id":"preq1_c",
"name":"7-aminomethyl-7-deazaguanine",
"compartment":"c",
"charge":1,
"formula":"C7H10N5O",
"notes":{
"original_bigg_ids":[
"preq1_c"
]
},
"annotation":{
"bigg.metabolite":[
"preq1"
],
"biocyc":[
"META:7-AMINOMETHYL-7-DEAZAGUANINE"
],
"chebi":[
"CHEBI:45126",
"CHEBI:58703"
],
"hmdb":[
"HMDB11690"
],
"inchi_key":[
"MEYMBLGOKYDGLZ-UHFFFAOYSA-O"
],
"kegg.compound":[
"C16675"
],
"metanetx.chemical":[
"MNXM3198"
],
"sabiork":[
"28949"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd19185"
]
}
},
{
"id":"preqtrna_c",
"name":"7-aminomethyl-7-deazaguaninyl tRNA",
"compartment":"c",
"charge":1,
"formula":"C7H10N5O",
"notes":{
"original_bigg_ids":[
"preqtrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"preqtrna"
],
"sbo":"SBO:0000247"
}
},
{
"id":"phetrna_c",
"name":"L-Phenylalanyl-tRNA(Phe)",
"compartment":"c",
"charge":1,
"formula":"C9H11NOR",
"notes":{
"original_bigg_ids":[
"phetrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"phetrna"
],
"chebi":[
"CHEBI:29153",
"CHEBI:13152",
"CHEBI:6283"
],
"kegg.compound":[
"C03511"
],
"metanetx.chemical":[
"MNXM89802"
],
"reactome.compound":[
"379789",
"379792"
],
"sabiork":[
"3867"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12335"
]
}
},
{
"id":"epxqtrna_c",
"name":"Epoxyquenosine34 tRNA",
"compartment":"c",
"charge":1,
"formula":"C12H16N5O4",
"notes":{
"original_bigg_ids":[
"epxqtrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"epxqtrna"
],
"sbo":"SBO:0000247"
}
},
{
"id":"murein4px4p4p_p",
"name":"Three disacharide linked murein units (tetrapeptide crosslinked tetrapeptide (A2pm->D-ala), one uncrosslinked tetrapaptide) (middle of chain)",
"compartment":"p",
"charge":-6,
"formula":"C111H169N21O59",
"notes":{
"original_bigg_ids":[
"murein4px4p4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein4px4p4p"
],
"biocyc":[
"META:CPD0-2266"
],
"inchi_key":[
"NPJMJVATSCHTAI-UHFFFAOYSA-F"
],
"metanetx.chemical":[
"MNXM87122"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15507"
]
}
},
{
"id":"trnaphe_c",
"name":"TRNA(Phe)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaphe_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaphe"
],
"biocyc":[
"META:PHE-tRNAs"
],
"chebi":[
"CHEBI:29184",
"CHEBI:15183",
"CHEBI:10687"
],
"kegg.compound":[
"C01648"
],
"metanetx.chemical":[
"MNXM90753"
],
"reactome.compound":[
"379767",
"379760"
],
"sabiork":[
"3847"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11919",
"cpd27782"
]
}
},
{
"id":"murein3p3p_p",
"name":"Two linked disacharide tripeptide murein units (uncrosslinked, middle of chain)",
"compartment":"p",
"charge":-4,
"formula":"C68H104N12O38",
"notes":{
"original_bigg_ids":[
"murein3p3p_p"
]
},
"annotation":{
"bigg.metabolite":[
"murein3p3p"
],
"inchi_key":[
"QKZNHGKXDALVQW-UHFFFAOYSA-I"
],
"metanetx.chemical":[
"MNXM88348"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15501"
]
}
},
{
"id":"quetrna_c",
"name":"Quenosine34 tRNA",
"compartment":"c",
"charge":1,
"formula":"C12H16N5O3",
"notes":{
"original_bigg_ids":[
"quetrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"quetrna"
],
"sbo":"SBO:0000247"
}
},
{
"id":"trnahis_c",
"name":"TRNA(His)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnahis_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnahis"
],
"biocyc":[
"META:HIS-tRNAs"
],
"chebi":[
"CHEBI:15178",
"CHEBI:29178",
"CHEBI:10682"
],
"kegg.compound":[
"C01643"
],
"metanetx.chemical":[
"MNXM90878"
],
"reactome.compound":[
"379752",
"379758"
],
"sabiork":[
"3842"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27218",
"cpd11914"
]
}
},
{
"id":"ura_c",
"name":"Uracil",
"compartment":"c",
"charge":0,
"formula":"C4H4N2O2",
"notes":{
"original_bigg_ids":[
"ura_c"
]
},
"annotation":{
"bigg.metabolite":[
"ura"
],
"biocyc":[
"META:URACIL"
],
"chebi":[
"CHEBI:27210",
"CHEBI:43254",
"CHEBI:15288",
"CHEBI:46375",
"CHEBI:17568",
"CHEBI:9882"
],
"hmdb":[
"HMDB00300"
],
"inchi_key":[
"ISAKRJDGNUQOIC-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00106"
],
"kegg.drug":[
"D00027",
"D09776"
],
"metanetx.chemical":[
"MNXM158"
],
"reactome.compound":[
"83962"
],
"sabiork":[
"61"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00092"
]
}
},
{
"id":"anhgm4p_p",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide",
"compartment":"p",
"charge":-2,
"formula":"C37H57N7O20",
"notes":{
"original_bigg_ids":[
"anhgm4p_p"
]
},
"annotation":{
"bigg.metabolite":[
"anhgm4p"
],
"biocyc":[
"META:CPD0-2292"
],
"inchi_key":[
"ZTOWCORYLXDAAW-JOUWMGDHSA-L"
],
"metanetx.chemical":[
"MNXM63488"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15398"
]
}
},
{
"id":"histrna_c",
"name":"L-Histidyl-tRNA(His)",
"compartment":"c",
"charge":1,
"formula":"C6H9N3OR",
"notes":{
"original_bigg_ids":[
"histrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"histrna"
],
"chebi":[
"CHEBI:13120",
"CHEBI:6243",
"CHEBI:29155"
],
"kegg.compound":[
"C02988"
],
"metanetx.chemical":[
"MNXM89831"
],
"reactome.compound":[
"379786",
"379764"
],
"sabiork":[
"3862"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12228"
]
}
},
{
"id":"anhgm3p_p",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide",
"compartment":"p",
"charge":-2,
"formula":"C34H52N6O19",
"notes":{
"original_bigg_ids":[
"anhgm3p_p"
]
},
"annotation":{
"bigg.metabolite":[
"anhgm3p"
],
"biocyc":[
"META:CPD0-2155"
],
"inchi_key":[
"ZWZMFRJKRXDGBE-UHFFFAOYSA-L"
],
"metanetx.chemical":[
"MNXM63489"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15397"
]
}
},
{
"id":"anhgm_c",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid",
"compartment":"c",
"charge":-1,
"formula":"C19H29N2O12",
"notes":{
"original_bigg_ids":[
"anhgm_c"
]
},
"annotation":{
"bigg.metabolite":[
"anhgm"
],
"metanetx.chemical":[
"MNXM3060"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15396"
]
}
},
{
"id":"udpglcur_c",
"name":"UDP-D-glucuronate",
"compartment":"c",
"charge":-3,
"formula":"C15H19N2O18P2",
"notes":{
"original_bigg_ids":[
"udpglcur_c"
]
},
"annotation":{
"bigg.metabolite":[
"udpglcur"
],
"biocyc":[
"META:UDP-GLUCURONATE"
],
"chebi":[
"CHEBI:46309",
"CHEBI:13489",
"CHEBI:13506",
"CHEBI:22104",
"CHEBI:58052",
"CHEBI:9846",
"CHEBI:17200"
],
"hmdb":[
"HMDB01384",
"HMDB00935"
],
"inchi_key":[
"HDYANYHVCAPMJV-LXQIFKJMSA-K"
],
"kegg.compound":[
"C00167"
],
"kegg.glycan":[
"G10612"
],
"metanetx.chemical":[
"MNXM87"
],
"reactome.compound":[
"174384",
"158601",
"1889970"
],
"sabiork":[
"22782",
"3916"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00144"
]
}
},
{
"id":"trnaasn_c",
"name":"TRNA Asn  C10H17O10PR2",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaasn_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaasn"
],
"biocyc":[
"META:ASN-tRNAs"
],
"chebi":[
"CHEBI:15168",
"CHEBI:29172",
"CHEBI:10674"
],
"kegg.compound":[
"C01637"
],
"metanetx.chemical":[
"MNXM90665"
],
"reactome.compound":[
"379722",
"379699"
],
"sabiork":[
"3844"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11908",
"cpd22284"
]
}
},
{
"id":"udpxyl_c",
"name":"UDP-D-xylose",
"compartment":"c",
"charge":-2,
"formula":"C14H20N2O16P2",
"notes":{
"original_bigg_ids":[
"udpxyl_c"
]
},
"annotation":{
"bigg.metabolite":[
"udpxyl"
],
"biocyc":[
"META:UDP-D-XYLOSE"
],
"chebi":[
"CHEBI:9813",
"CHEBI:22105",
"CHEBI:59456",
"CHEBI:46260",
"CHEBI:16082",
"CHEBI:13490",
"CHEBI:57632"
],
"hmdb":[
"HMDB01018"
],
"inchi_key":[
"DQQDLYVHOTZLOR-OCIMBMBZSA-L"
],
"kegg.compound":[
"C00190"
],
"kegg.glycan":[
"G10613"
],
"metanetx.chemical":[
"MNXM284"
],
"reactome.compound":[
"742353",
"742361"
],
"sabiork":[
"3927",
"3926"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00163"
]
}
},
{
"id":"LalaDgluMdapDala_c",
"name":"L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine",
"compartment":"c",
"charge":-1,
"formula":"C18H30N5O9",
"notes":{
"original_bigg_ids":[
"LalaDgluMdapDala_c"
]
},
"annotation":{
"bigg.metabolite":[
"LalaDgluMdapDala"
],
"inchi_key":[
"BAPAFFOXTCMVCC-UHFFFAOYSA-M"
],
"metanetx.chemical":[
"MNXM59271"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15387"
]
}
},
{
"id":"asntrna_c",
"name":"L-Asparaginyl-tRNA(Asn)",
"compartment":"c",
"charge":1,
"formula":"C4H8N2O2R",
"notes":{
"original_bigg_ids":[
"asntrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"asntrna"
],
"chebi":[
"CHEBI:13084",
"CHEBI:6192",
"CHEBI:29265",
"CHEBI:13251"
],
"kegg.compound":[
"C03402"
],
"metanetx.chemical":[
"MNXM89761"
],
"reactome.compound":[
"379718",
"379728"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd16182",
"cpd12313"
]
}
},
{
"id":"anhgm4p_c",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide",
"compartment":"c",
"charge":-2,
"formula":"C37H57N7O20",
"notes":{
"original_bigg_ids":[
"anhgm4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"anhgm4p"
],
"biocyc":[
"META:CPD0-2292"
],
"inchi_key":[
"ZTOWCORYLXDAAW-JOUWMGDHSA-L"
],
"metanetx.chemical":[
"MNXM63488"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15398"
]
}
},
{
"id":"gdpddman_c",
"name":"GDP-4-dehydro-6-deoxy-D-mannose",
"compartment":"c",
"charge":-2,
"formula":"C16H21N5O15P2",
"notes":{
"original_bigg_ids":[
"gdpddman_c"
]
},
"annotation":{
"bigg.metabolite":[
"gdpddman"
],
"biocyc":[
"META:GDP-4-DEHYDRO-6-DEOXY-D-MANNOSE"
],
"chebi":[
"CHEBI:13329",
"CHEBI:57964",
"CHEBI:5214",
"CHEBI:21153",
"CHEBI:16955"
],
"inchi_key":[
"PNHLMHWWFOPQLK-BKUUWRAGSA-L"
],
"kegg.compound":[
"C01222"
],
"metanetx.chemical":[
"MNXM516"
],
"reactome.compound":[
"6787618"
],
"sabiork":[
"1566"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00900"
]
}
},
{
"id":"asptrna_c",
"name":"L-Aspartyl-tRNA(Asp)",
"compartment":"c",
"charge":0,
"formula":"C4H6NO3R",
"notes":{
"original_bigg_ids":[
"asptrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"asptrna"
],
"kegg.compound":[
"C02984"
],
"metanetx.chemical":[
"MNXM90839"
],
"sabiork":[
"3866"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12226"
]
}
},
{
"id":"anhgm_p",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramic acid",
"compartment":"p",
"charge":-1,
"formula":"C19H29N2O12",
"notes":{
"original_bigg_ids":[
"anhgm_p"
]
},
"annotation":{
"bigg.metabolite":[
"anhgm"
],
"metanetx.chemical":[
"MNXM3060"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15396"
]
}
},
{
"id":"trnaasp_c",
"name":"TRNA(Asp)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaasp_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaasp"
],
"biocyc":[
"META:ASP-tRNAs"
],
"chebi":[
"CHEBI:15169",
"CHEBI:10675",
"CHEBI:29186"
],
"kegg.compound":[
"C01638"
],
"metanetx.chemical":[
"MNXM90752"
],
"reactome.compound":[
"379715",
"379711"
],
"sabiork":[
"3846"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11909",
"cpd22286"
]
}
},
{
"id":"LalaDgluMdapDala_p",
"name":"L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate-D-alanine",
"compartment":"p",
"charge":-1,
"formula":"C18H30N5O9",
"notes":{
"original_bigg_ids":[
"LalaDgluMdapDala_p"
]
},
"annotation":{
"bigg.metabolite":[
"LalaDgluMdapDala"
],
"inchi_key":[
"BAPAFFOXTCMVCC-UHFFFAOYSA-M"
],
"metanetx.chemical":[
"MNXM59271"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15387"
]
}
},
{
"id":"anhgm3p_c",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide",
"compartment":"c",
"charge":-2,
"formula":"C34H52N6O19",
"notes":{
"original_bigg_ids":[
"anhgm3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"anhgm3p"
],
"biocyc":[
"META:CPD0-2155"
],
"inchi_key":[
"ZWZMFRJKRXDGBE-UHFFFAOYSA-L"
],
"metanetx.chemical":[
"MNXM63489"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15397"
]
}
},
{
"id":"acgam_c",
"name":"N-Acetyl-D-glucosamine",
"compartment":"c",
"charge":0,
"formula":"C8H15NO6",
"notes":{
"original_bigg_ids":[
"acgam_c"
]
},
"annotation":{
"bigg.metabolite":[
"acgam"
],
"biocyc":[
"META:N-acetyl-D-glucosamine"
],
"chebi":[
"CHEBI:21517",
"CHEBI:12455",
"CHEBI:506227",
"CHEBI:12563",
"CHEBI:7123",
"CHEBI:17411",
"CHEBI:58134"
],
"hmdb":[
"HMDB62641",
"HMDB00215",
"HMDB14288",
"HMDB00533"
],
"inchi_key":[
"OVRNDRQMDRJTHS-RTRLPJTCSA-N"
],
"kegg.compound":[
"C00140"
],
"metanetx.chemical":[
"MNXM143"
],
"reactome.compound":[
"2162231",
"1678743"
],
"sabiork":[
"95"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27608",
"cpd00122"
]
}
},
{
"id":"trnathr_c",
"name":"TRNA(Thr)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnathr_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnathr"
],
"biocyc":[
"META:THR-tRNAs"
],
"chebi":[
"CHEBI:29180",
"CHEBI:10690",
"CHEBI:15187"
],
"kegg.compound":[
"C01651"
],
"metanetx.chemical":[
"MNXM90883"
],
"reactome.compound":[
"379791",
"379749"
],
"sabiork":[
"3803"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11922",
"cpd28225"
]
}
},
{
"id":"anhm4p_c",
"name":"1,6-anhydrous-N-Acetylmuramyl-tetrapeptide",
"compartment":"c",
"charge":-2,
"formula":"C29H44N6O15",
"notes":{
"original_bigg_ids":[
"anhm4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"anhm4p"
],
"inchi_key":[
"OUWAMZWZTFUVMV-NPLPHQDTSA-L"
],
"metanetx.chemical":[
"MNXM5405"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15401"
]
}
},
{
"id":"thrtrna_c",
"name":"L-Threonyl-tRNA(Thr)",
"compartment":"c",
"charge":1,
"formula":"C4H9NO2R",
"notes":{
"original_bigg_ids":[
"thrtrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"thrtrna"
],
"chebi":[
"CHEBI:6309",
"CHEBI:29163",
"CHEBI:13176"
],
"kegg.compound":[
"C02992"
],
"metanetx.chemical":[
"MNXM89895"
],
"reactome.compound":[
"379783",
"379779"
],
"sabiork":[
"3804"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12229"
]
}
},
{
"id":"LalaDgluMdap_p",
"name":"L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate",
"compartment":"p",
"charge":-1,
"formula":"C15H25N4O8",
"notes":{
"original_bigg_ids":[
"LalaDgluMdap_p"
]
},
"annotation":{
"bigg.metabolite":[
"LalaDgluMdap"
],
"metanetx.chemical":[
"MNXM90242"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15386"
]
}
},
{
"id":"anhm_c",
"name":"1,6-anhydrous-N-Acetylmuramate",
"compartment":"c",
"charge":-1,
"formula":"C11H16NO7",
"notes":{
"original_bigg_ids":[
"anhm_c"
]
},
"annotation":{
"bigg.metabolite":[
"anhm"
],
"metanetx.chemical":[
"MNXM90585"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15399"
]
}
},
{
"id":"trnaleu_c",
"name":"TRNA(Leu)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaleu_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaleu"
],
"biocyc":[
"META:LEU-tRNAs"
],
"chebi":[
"CHEBI:10684",
"CHEBI:29169",
"CHEBI:15180"
],
"kegg.compound":[
"C01645"
],
"metanetx.chemical":[
"MNXM90880"
],
"reactome.compound":[
"379788",
"379771"
],
"sabiork":[
"3850"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11916",
"cpd27383"
]
}
},
{
"id":"anhm3p_c",
"name":"1,6-anhydrous-N-Acetylmuramyl-tripeptide",
"compartment":"c",
"charge":-2,
"formula":"C26H39N5O14",
"notes":{
"original_bigg_ids":[
"anhm3p_c"
]
},
"annotation":{
"bigg.metabolite":[
"anhm3p"
],
"biocyc":[
"META:CPD0-2284"
],
"inchi_key":[
"KGVLFEPQSVUIRC-FYQNUYSYSA-L"
],
"metanetx.chemical":[
"MNXM32389"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15400"
]
}
},
{
"id":"leutrna_c",
"name":"L-Leucyl-tRNA(Leu)",
"compartment":"c",
"charge":1,
"formula":"C6H13NOR",
"notes":{
"original_bigg_ids":[
"leutrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"leutrna"
],
"chebi":[
"CHEBI:16624",
"CHEBI:13133",
"CHEBI:6262",
"CHEBI:13134"
],
"kegg.compound":[
"C02047"
],
"metanetx.chemical":[
"MNXM697"
],
"reactome.compound":[
"379773",
"379757"
],
"sabiork":[
"3869"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12003"
]
}
},
{
"id":"LalaDgluMdap_c",
"name":"L-alanine-D-glutamate-meso-2,6-diaminoheptanedioate",
"compartment":"c",
"charge":-1,
"formula":"C15H25N4O8",
"notes":{
"original_bigg_ids":[
"LalaDgluMdap_c"
]
},
"annotation":{
"bigg.metabolite":[
"LalaDgluMdap"
],
"metanetx.chemical":[
"MNXM90242"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15386"
]
}
},
{
"id":"trnaile_c",
"name":"TRNA(Ile)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaile_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaile"
],
"biocyc":[
"META:ILE-tRNAs"
],
"chebi":[
"CHEBI:29174",
"CHEBI:15179",
"CHEBI:10683"
],
"kegg.compound":[
"C01644"
],
"metanetx.chemical":[
"MNXM90879"
],
"reactome.compound":[
"379739",
"379750"
],
"sabiork":[
"3832"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd27269",
"cpd11915"
]
}
},
{
"id":"LalaDglu_c",
"name":"L-alanine-D-glutamate",
"compartment":"c",
"charge":-1,
"formula":"C8H13N2O5",
"notes":{
"original_bigg_ids":[
"LalaDglu_c"
]
},
"annotation":{
"bigg.metabolite":[
"LalaDglu"
],
"biocyc":[
"META:CPD0-2190"
],
"chebi":[
"CHEBI:61566",
"CHEBI:61395"
],
"inchi_key":[
"VYZAGTDAHUIRQA-CRCLSJGQSA-M"
],
"kegg.compound":[
"C20957"
],
"metanetx.chemical":[
"MNXM3630"
],
"sabiork":[
"22905"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15385"
]
}
},
{
"id":"iletrna_c",
"name":"L-Isoleucyl-tRNA(Ile)",
"compartment":"c",
"charge":1,
"formula":"C6H13NOR",
"notes":{
"original_bigg_ids":[
"iletrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"iletrna"
],
"chebi":[
"CHEBI:13128",
"CHEBI:6256",
"CHEBI:29160"
],
"kegg.compound":[
"C03127"
],
"metanetx.chemical":[
"MNXM89832"
],
"reactome.compound":[
"379787",
"379769"
],
"sabiork":[
"3853"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12256"
]
}
},
{
"id":"um4p_c",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine",
"compartment":"c",
"charge":-4,
"formula":"C38H56N8O27P2",
"notes":{
"original_bigg_ids":[
"um4p_c"
]
},
"annotation":{
"bigg.metabolite":[
"um4p"
],
"metanetx.chemical":[
"MNXM147329"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15579"
]
}
},
{
"id":"trnalys_c",
"name":"TRNA(Lys)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnalys_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnalys"
],
"biocyc":[
"META:LYS-tRNAs"
],
"chebi":[
"CHEBI:10685",
"CHEBI:29185",
"CHEBI:15181"
],
"kegg.compound":[
"C01646"
],
"metanetx.chemical":[
"MNXM90881"
],
"reactome.compound":[
"379747",
"379776"
],
"sabiork":[
"3845"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11917",
"cpd27388"
]
}
},
{
"id":"LalaLglu_c",
"name":"L-alanine-L-glutamate",
"compartment":"c",
"charge":-1,
"formula":"C8H13N2O5",
"notes":{
"original_bigg_ids":[
"LalaLglu_c"
]
},
"annotation":{
"bigg.metabolite":[
"LalaLglu"
],
"biocyc":[
"META:CPD0-1445"
],
"chebi":[
"CHEBI:61396",
"CHEBI:61565"
],
"inchi_key":[
"VYZAGTDAHUIRQA-WHFBIAKZSA-M"
],
"kegg.compound":[
"C20958"
],
"metanetx.chemical":[
"MNXM4026"
],
"sabiork":[
"22899"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15388"
]
}
},
{
"id":"pchlld_exc_c",
"name":"Excited protochlorophyllide",
"compartment":"c",
"charge":-1,
"formula":"C35H31MgN4O5",
"notes":{
"original_bigg_ids":[
"pchlld_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"pchlld_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"lystrna_c",
"name":"L-Lysine-tRNA (Lys)",
"compartment":"c",
"charge":2,
"formula":"C6H15N2OR",
"notes":{
"original_bigg_ids":[
"lystrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"lystrna"
],
"chebi":[
"CHEBI:6267",
"CHEBI:13138",
"CHEBI:13137",
"CHEBI:16047"
],
"kegg.compound":[
"C01931"
],
"metanetx.chemical":[
"MNXM89922"
],
"reactome.compound":[
"379795",
"379736"
],
"sabiork":[
"3865"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15249",
"cpd01326"
]
}
},
{
"id":"alatrna_c",
"name":"L-Alanyl-tRNA(Ala)",
"compartment":"c",
"charge":1,
"formula":"C3H7NOR",
"notes":{
"original_bigg_ids":[
"alatrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"alatrna"
],
"chebi":[
"CHEBI:17732",
"CHEBI:13070",
"CHEBI:6172",
"CHEBI:13071"
],
"metanetx.chemical":[
"MNXM89815"
],
"reactome.compound":[
"379700",
"379730"
],
"sabiork":[
"3861"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd16181"
]
}
},
{
"id":"fldox_c",
"name":"Flavodoxin (oxidized) - obsolete",
"compartment":"c",
"charge":-2,
"formula":"C17H19N4O9P",
"notes":{
"original_bigg_ids":[
"fldox_c"
]
},
"annotation":{
"bigg.metabolite":[
"fldox"
],
"biocyc":[
"META:Oxidized-flavodoxins"
],
"kegg.compound":[
"C02869"
],
"metanetx.chemical":[
"MNXM4076"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12207"
]
}
},
{
"id":"trnaala_c",
"name":"TRNA(Ala)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaala_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaala"
],
"biocyc":[
"META:ALA-tRNAs"
],
"chebi":[
"CHEBI:29170",
"CHEBI:15166",
"CHEBI:10672"
],
"kegg.compound":[
"C01635"
],
"metanetx.chemical":[
"MNXM89576"
],
"reactome.compound":[
"379729",
"379731"
],
"sabiork":[
"3841"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd22249",
"cpd11906"
]
}
},
{
"id":"fldrd_c",
"name":"Flavodoxin (reduced) - obsolete",
"compartment":"c",
"charge":-2,
"formula":"C17H21N4O9P",
"notes":{
"original_bigg_ids":[
"fldrd_c"
]
},
"annotation":{
"bigg.metabolite":[
"fldrd"
],
"biocyc":[
"META:Reduced-flavodoxins"
],
"kegg.compound":[
"C02745"
],
"metanetx.chemical":[
"MNXM3707"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12173"
]
}
},
{
"id":"valtrna_c",
"name":"L-Valyl-tRNA(Val)",
"compartment":"c",
"charge":1,
"formula":"C5H11NOR",
"notes":{
"original_bigg_ids":[
"valtrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"valtrna"
],
"chebi":[
"CHEBI:13187",
"CHEBI:29164",
"CHEBI:6322"
],
"kegg.compound":[
"C02554"
],
"metanetx.chemical":[
"MNXM90110"
],
"reactome.compound":[
"379782",
"379790"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12133"
]
}
},
{
"id":"trnaval_c",
"name":"TRNA(Val)",
"compartment":"c",
"charge":0,
"formula":"HR",
"notes":{
"original_bigg_ids":[
"trnaval_c"
]
},
"annotation":{
"bigg.metabolite":[
"trnaval"
],
"biocyc":[
"META:VAL-tRNAs"
],
"chebi":[
"CHEBI:10694",
"CHEBI:15191",
"CHEBI:29183"
],
"kegg.compound":[
"C01653"
],
"metanetx.chemical":[
"MNXM90885"
],
"reactome.compound":[
"379735",
"379793"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd11924",
"cpd28318"
]
}
},
{
"id":"5g2oxpt_p",
"name":"2-Oxoarginine",
"compartment":"p",
"charge":0,
"formula":"C6H11N3O3",
"notes":{
"original_bigg_ids":[
"5g2oxpt_p"
]
},
"annotation":{
"bigg.metabolite":[
"5g2oxpt"
],
"biocyc":[
"META:CPD-824"
],
"chebi":[
"CHEBI:20572",
"CHEBI:1249",
"CHEBI:18253",
"CHEBI:28116",
"CHEBI:58489",
"CHEBI:12129",
"CHEBI:19740",
"CHEBI:2060"
],
"hmdb":[
"HMDB04225",
"HMDB06815"
],
"inchi_key":[
"ARBHXJXXVVHMET-UHFFFAOYSA-N"
],
"kegg.compound":[
"C03771"
],
"metanetx.chemical":[
"MNXM1037"
],
"sabiork":[
"6844"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02364",
"cpd03528"
]
}
},
{
"id":"fmettrna_c",
"name":"N-Formylmethionyl-tRNA",
"compartment":"c",
"charge":0,
"formula":"C6H10NO2SR",
"notes":{
"original_bigg_ids":[
"fmettrna_c"
]
},
"annotation":{
"bigg.metabolite":[
"fmettrna"
],
"chebi":[
"CHEBI:17119",
"CHEBI:12510",
"CHEBI:12597",
"CHEBI:7283"
],
"kegg.compound":[
"C03294"
],
"metanetx.chemical":[
"MNXM95381"
],
"reactome.compound":[
"5368270",
"5621506"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd12285"
]
}
},
{
"id":"h2o2_p",
"name":"Hydrogen peroxide",
"compartment":"p",
"charge":0,
"formula":"H2O2",
"notes":{
"original_bigg_ids":[
"h2o2_p"
]
},
"annotation":{
"bigg.metabolite":[
"h2o2"
],
"biocyc":[
"META:HYDROGEN-PEROXIDE"
],
"chebi":[
"CHEBI:29192",
"CHEBI:44785",
"CHEBI:13355",
"CHEBI:13354",
"CHEBI:29370",
"CHEBI:24637",
"CHEBI:44812",
"CHEBI:5586",
"CHEBI:25940",
"CHEBI:44782",
"CHEBI:16240"
],
"hmdb":[
"HMDB03125",
"HMDB06491"
],
"inchi_key":[
"MHAJPDPJQMAIIY-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00027"
],
"kegg.drug":[
"D00008"
],
"metanetx.chemical":[
"MNXM22"
],
"reactome.compound":[
"1614617",
"29408",
"351629",
"189481",
"113575"
],
"sabiork":[
"1909"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00025"
]
}
},
{
"id":"leu__L_p",
"name":"L-Leucine",
"compartment":"p",
"charge":0,
"formula":"C6H13NO2",
"notes":{
"original_bigg_ids":[
"leu__L_p"
]
},
"annotation":{
"bigg.metabolite":[
"leu__L"
],
"biocyc":[
"META:LEU"
],
"chebi":[
"CHEBI:32620",
"CHEBI:25017",
"CHEBI:43695",
"CHEBI:21348",
"CHEBI:13131",
"CHEBI:43733",
"CHEBI:43646",
"CHEBI:43814",
"CHEBI:6260",
"CHEBI:32628",
"CHEBI:32627",
"CHEBI:10866",
"CHEBI:57427",
"CHEBI:32619",
"CHEBI:15603"
],
"hmdb":[
"HMDB00687",
"HMDB62203"
],
"inchi_key":[
"ROHFNLRQFUQHCH-YFKPBYRVSA-N"
],
"kegg.compound":[
"C16439",
"C00123"
],
"kegg.drug":[
"D00030"
],
"lipidmaps":[
"LMFA01100048"
],
"metanetx.chemical":[
"MNXM140"
],
"reactome.compound":[
"29588",
"113580",
"351964"
],
"sabiork":[
"21059",
"69"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00107",
"cpd15143"
]
}
},
{
"id":"photon410_e",
"name":"Photon (400nm-420nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon410_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon410"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon430_e",
"name":"Photon (420nm-440nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon430_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon430"
],
"sbo":"SBO:0000247"
}
},
{
"id":"leu__L_e",
"name":"L-Leucine",
"compartment":"e",
"charge":0,
"formula":"C6H13NO2",
"notes":{
"original_bigg_ids":[
"leu__L_e"
]
},
"annotation":{
"bigg.metabolite":[
"leu__L"
],
"biocyc":[
"META:LEU"
],
"chebi":[
"CHEBI:32620",
"CHEBI:25017",
"CHEBI:43695",
"CHEBI:21348",
"CHEBI:13131",
"CHEBI:43733",
"CHEBI:43646",
"CHEBI:43814",
"CHEBI:6260",
"CHEBI:32628",
"CHEBI:32627",
"CHEBI:10866",
"CHEBI:57427",
"CHEBI:32619",
"CHEBI:15603"
],
"hmdb":[
"HMDB00687",
"HMDB62203"
],
"inchi_key":[
"ROHFNLRQFUQHCH-YFKPBYRVSA-N"
],
"kegg.compound":[
"C16439",
"C00123"
],
"kegg.drug":[
"D00030"
],
"lipidmaps":[
"LMFA01100048"
],
"metanetx.chemical":[
"MNXM140"
],
"reactome.compound":[
"29588",
"113580",
"351964"
],
"sabiork":[
"21059",
"69"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00107",
"cpd15143"
]
}
},
{
"id":"photon450_e",
"name":"Photon (417 to 472 nm, indigo/blue)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon450_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon450"
],
"metanetx.chemical":[
"MNXM145796"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30505"
]
}
},
{
"id":"no2_p",
"name":"Nitrite",
"compartment":"p",
"charge":-1,
"formula":"NO2",
"notes":{
"original_bigg_ids":[
"no2_p"
]
},
"annotation":{
"bigg.metabolite":[
"no2"
],
"biocyc":[
"META:NITRITE"
],
"chebi":[
"CHEBI:16301",
"CHEBI:14658",
"CHEBI:7585",
"CHEBI:44396",
"CHEBI:25567"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/84af9b8c-5f58-4093-85cb-964ba8ed40b7"
],
"hmdb":[
"HMDB02786"
],
"inchi_key":[
"IOVCWXUNBOPUCH-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00088"
],
"metanetx.chemical":[
"MNXM107"
],
"reactome.compound":[
"1222379"
],
"sabiork":[
"3058"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00075"
]
}
},
{
"id":"photon470_e",
"name":"Photon (460nm-480nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon470_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon470"
],
"sbo":"SBO:0000247"
}
},
{
"id":"no2_e",
"name":"Nitrite",
"compartment":"e",
"charge":-1,
"formula":"NO2",
"notes":{
"original_bigg_ids":[
"no2_e"
]
},
"annotation":{
"bigg.metabolite":[
"no2"
],
"biocyc":[
"META:NITRITE"
],
"chebi":[
"CHEBI:16301",
"CHEBI:14658",
"CHEBI:7585",
"CHEBI:44396",
"CHEBI:25567"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/84af9b8c-5f58-4093-85cb-964ba8ed40b7"
],
"hmdb":[
"HMDB02786"
],
"inchi_key":[
"IOVCWXUNBOPUCH-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00088"
],
"metanetx.chemical":[
"MNXM107"
],
"reactome.compound":[
"1222379"
],
"sabiork":[
"3058"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00075"
]
}
},
{
"id":"photon490_e",
"name":"Photon (451 to 526 nm, blue/green)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon490_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon490"
],
"metanetx.chemical":[
"MNXM145818"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd30506"
]
}
},
{
"id":"zeax_exc_c",
"name":"Zeaxanthin (excited)",
"compartment":"c",
"charge":0,
"formula":"C40H56O2Z",
"notes":{
"original_bigg_ids":[
"zeax_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"zeax_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon510_e",
"name":"Photon (500nm-520nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon510_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon510"
],
"sbo":"SBO:0000247"
}
},
{
"id":"chla_qy2_exc_c",
"name":"Photosystem II excited chlorophyll A, Qy band (long wavelength)",
"compartment":"c",
"charge":0,
"formula":"C55H72MgN4O5",
"notes":{
"original_bigg_ids":[
"chla_qy2_exc_c"
]
},
"annotation":{
"bigg.metabolite":[
"chla_qy2_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon530_e",
"name":"Photon (520nm-540nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon530_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon530"
],
"sbo":"SBO:0000247"
}
},
{
"id":"p700_um",
"name":"PSI reaction center P700",
"compartment":"um",
"charge":0,
"formula":"C55H71MgN4O5",
"notes":{
"original_bigg_ids":[
"p700_um"
]
},
"annotation":{
"bigg.metabolite":[
"p700"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon550_e",
"name":"Photon (540nm-560nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon550_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon550"
],
"sbo":"SBO:0000247"
}
},
{
"id":"p700_exc_um",
"name":"PSI reaction center P700, excited",
"compartment":"um",
"charge":0,
"formula":"C55H71MgN4O5",
"notes":{
"original_bigg_ids":[
"p700_exc_um"
]
},
"annotation":{
"bigg.metabolite":[
"p700_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"p680_exc_um",
"name":"PSII reaction center P680, excited",
"compartment":"um",
"charge":0,
"formula":"C55H71MgN4O5",
"notes":{
"original_bigg_ids":[
"p680_exc_um"
]
},
"annotation":{
"bigg.metabolite":[
"p680_exc"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon570_e",
"name":"Photon (560nm-580nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon570_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon570"
],
"sbo":"SBO:0000247"
}
},
{
"id":"p680_um",
"name":"PSII reaction center P680",
"compartment":"um",
"charge":0,
"formula":"C55H71MgN4O5",
"notes":{
"original_bigg_ids":[
"p680_um"
]
},
"annotation":{
"bigg.metabolite":[
"p680"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon590_e",
"name":"Photon (580nm-600nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon590_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon590"
],
"sbo":"SBO:0000247"
}
},
{
"id":"b14glucan_c",
"name":"Cellulose (beta-1,4-glucan)",
"compartment":"c",
"charge":0,
"formula":"C12H20O10",
"notes":{
"original_bigg_ids":[
"b14glucan_c"
]
},
"annotation":{
"bigg.metabolite":[
"b14glucan"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon610_e",
"name":"Photon (600nm-620nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon610_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon610"
],
"sbo":"SBO:0000247"
}
},
{
"id":"fald_c",
"name":"Formaldehyde",
"compartment":"c",
"charge":0,
"formula":"CH2O",
"notes":{
"original_bigg_ids":[
"fald_c"
]
},
"annotation":{
"bigg.metabolite":[
"fald"
],
"biocyc":[
"META:FORMALDEHYDE",
"META:CARBONYL-GROUP"
],
"chebi":[
"CHEBI:16842",
"CHEBI:337763",
"CHEBI:24077",
"CHEBI:14274",
"CHEBI:5142"
],
"envipath":[
"650babc9-9d68-4b73-9332-11972ca26f7b/compound/71fc9221-3497-43e5-963c-ecd5390cc239",
"5882df9c-dae1-4d80-a40e-db4724271456/compound/4103a49c-b6c5-4db6-aef3-65b68fd2f6da",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/8ee6f55a-4488-4606-b65f-5aead102ccfc"
],
"hmdb":[
"HMDB01426"
],
"inchi_key":[
"WSFSSNUMVMOOMR-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00067"
],
"kegg.drug":[
"D00017"
],
"metanetx.chemical":[
"MNXM56"
],
"reactome.compound":[
"143501",
"29478",
"879250",
"6797920"
],
"sabiork":[
"1928"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00055"
]
}
},
{
"id":"photon630_e",
"name":"Photon (620nm-640nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon630_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon630"
],
"sbo":"SBO:0000247"
}
},
{
"id":"hmgth_c",
"name":"Hydroxymethylglutathione",
"compartment":"c",
"charge":-1,
"formula":"C11H18N3O7S",
"notes":{
"original_bigg_ids":[
"hmgth_c"
]
},
"annotation":{
"bigg.metabolite":[
"hmgth"
],
"biocyc":[
"META:S-HYDROXYMETHYLGLUTATHIONE"
],
"chebi":[
"CHEBI:48926",
"CHEBI:22052",
"CHEBI:58758",
"CHEBI:40619",
"CHEBI:34963"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/fee99d5c-735f-4808-89ec-dbadb58f766c"
],
"hmdb":[
"HMDB04662"
],
"inchi_key":[
"PIUSLWSYOYFRFR-BQBZGAKWSA-M"
],
"kegg.compound":[
"C14180"
],
"metanetx.chemical":[
"MNXM1051"
],
"reactome.compound":[
"5692221"
],
"sabiork":[
"20730"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd09879",
"cpd15487"
]
}
},
{
"id":"photon650_e",
"name":"Photon (640nm-660nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon650_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon650"
],
"sbo":"SBO:0000247"
}
},
{
"id":"Sfglutth_c",
"name":"S-Formylglutathione",
"compartment":"c",
"charge":-1,
"formula":"C11H16N3O7S",
"notes":{
"original_bigg_ids":[
"Sfglutth_c"
]
},
"annotation":{
"bigg.metabolite":[
"Sfglutth"
],
"biocyc":[
"META:CPD-548"
],
"chebi":[
"CHEBI:12746",
"CHEBI:22044",
"CHEBI:16225",
"CHEBI:12764",
"CHEBI:57688",
"CHEBI:8956"
],
"envipath":[
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/d4e9e4f7-3585-4e9c-92d7-3860ef127777"
],
"hmdb":[
"HMDB01550",
"HMDB62625"
],
"inchi_key":[
"FHXAGOICBFGEBF-BQBZGAKWSA-M"
],
"kegg.compound":[
"C01031"
],
"metanetx.chemical":[
"MNXM952"
],
"reactome.compound":[
"5693723",
"5692249"
],
"sabiork":[
"2220"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00759"
]
}
},
{
"id":"photon670_e",
"name":"Photon (660nm-680nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon670_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon670"
],
"sbo":"SBO:0000247"
}
},
{
"id":"photon690_e",
"name":"Photon (680nm-700nm)",
"compartment":"e",
"charge":0,
"formula":"Z",
"notes":{
"original_bigg_ids":[
"photon690_e"
]
},
"annotation":{
"bigg.metabolite":[
"photon690"
],
"sbo":"SBO:0000247"
}
},
{
"id":"5oxpro_c",
"name":"5-Oxoproline",
"compartment":"c",
"charge":-1,
"formula":"C5H6NO3",
"notes":{
"original_bigg_ids":[
"5oxpro_c"
]
},
"annotation":{
"bigg.metabolite":[
"5oxpro"
],
"biocyc":[
"META:5-OXOPROLINE"
],
"chebi":[
"CHEBI:16010",
"CHEBI:12157",
"CHEBI:44943",
"CHEBI:18183",
"CHEBI:20619",
"CHEBI:44704",
"CHEBI:2116",
"CHEBI:58402",
"CHEBI:12153",
"CHEBI:20624",
"CHEBI:57606",
"CHEBI:2113"
],
"hmdb":[
"HMDB00267",
"HMDB60262",
"HMDB00805"
],
"inchi_key":[
"ODHCTXKNWHHXJC-VKHMYHEASA-M"
],
"kegg.compound":[
"C01879"
],
"metanetx.chemical":[
"MNXM722719"
],
"reactome.compound":[
"1247942"
],
"sabiork":[
"2392"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd01293"
]
}
},
{
"id":"calxan_c",
"name":"Caloxanthin",
"compartment":"c",
"charge":0,
"formula":"C40H56O3",
"notes":{
"original_bigg_ids":[
"calxan_c"
]
},
"annotation":{
"bigg.metabolite":[
"calxan"
],
"sbo":"SBO:0000247"
}
},
{
"id":"acgam6p_c",
"name":"N-Acetyl-D-glucosamine 6-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C8H14NO9P",
"notes":{
"original_bigg_ids":[
"acgam6p_c"
]
},
"annotation":{
"bigg.metabolite":[
"acgam6p"
],
"biocyc":[
"META:CPD-16168",
"META:N-ACETYL-D-GLUCOSAMINE-6-P"
],
"chebi":[
"CHEBI:49353",
"CHEBI:57513",
"CHEBI:49359",
"CHEBI:12456",
"CHEBI:15784",
"CHEBI:21521",
"CHEBI:7127",
"CHEBI:39577",
"CHEBI:12564"
],
"hmdb":[
"HMDB01062",
"HMDB02817"
],
"inchi_key":[
"BRGMHAYQAZFZDJ-RTRLPJTCSA-L"
],
"kegg.compound":[
"C00357"
],
"metanetx.chemical":[
"MNXM63556"
],
"reactome.compound":[
"449703"
],
"sabiork":[
"1676"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00293"
]
}
},
{
"id":"acmanap_c",
"name":"N-Acetyl-D-mannosamine 6-phosphate",
"compartment":"c",
"charge":-2,
"formula":"C8H14NO9P",
"notes":{
"original_bigg_ids":[
"acmanap_c"
]
},
"annotation":{
"bigg.metabolite":[
"acmanap"
],
"biocyc":[
"META:N-ACETYL-D-MANNOSAMINE-6P"
],
"chebi":[
"CHEBI:62165",
"CHEBI:62168",
"CHEBI:58557",
"CHEBI:7142",
"CHEBI:21539",
"CHEBI:28273"
],
"hmdb":[
"HMDB01121"
],
"inchi_key":[
"QDSLHWJDSQGPEE-WCTZXXKLSA-L"
],
"kegg.compound":[
"C04257"
],
"metanetx.chemical":[
"MNXM4708"
],
"reactome.compound":[
"4085225"
],
"sabiork":[
"1802"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd02612"
]
}
},
{
"id":"acmum6p_c",
"name":"N-acetylmuramate 6-phosphate",
"compartment":"c",
"charge":-3,
"formula":"C11H17NO11P",
"notes":{
"original_bigg_ids":[
"acmum6p_c"
]
},
"annotation":{
"bigg.metabolite":[
"acmum6p"
],
"chebi":[
"CHEBI:47968",
"CHEBI:58722"
],
"inchi_key":[
"NMEMTQKUEVNSPV-MKFCKLDKSA-K"
],
"kegg.compound":[
"C16698"
],
"metanetx.chemical":[
"MNXM90332"
],
"sabiork":[
"28082"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd15391"
]
}
},
{
"id":"cl_p",
"name":"Chloride",
"compartment":"p",
"charge":-1,
"formula":"Cl",
"notes":{
"original_bigg_ids":[
"cl_p"
]
},
"annotation":{
"bigg.metabolite":[
"cl"
],
"biocyc":[
"META:HCL",
"META:CL-"
],
"chebi":[
"CHEBI:24635",
"CHEBI:3731",
"CHEBI:13364",
"CHEBI:3616",
"CHEBI:13291",
"CHEBI:17883",
"CHEBI:48804",
"CHEBI:13970",
"CHEBI:5590",
"CHEBI:50315",
"CHEBI:17996"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/8797b51e-be83-48e1-82db-612c84006fdf",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b3225d45-6d2f-4312-a60d-70c87b617ad4"
],
"hmdb":[
"HMDB00492",
"HMDB02073",
"HMDB02306",
"HMDB02162"
],
"inchi_key":[
"VEXZGXHMUGYJMC-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00698",
"C01327"
],
"kegg.drug":[
"D02057"
],
"metanetx.chemical":[
"MNXM43"
],
"reactome.compound":[
"29572",
"188972",
"3301973",
"352022",
"2731020",
"2731008",
"2730999"
],
"sabiork":[
"2270",
"51"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00099"
]
}
},
{
"id":"cl_c",
"name":"Chloride",
"compartment":"c",
"charge":-1,
"formula":"Cl",
"notes":{
"original_bigg_ids":[
"cl_c"
]
},
"annotation":{
"bigg.metabolite":[
"cl"
],
"biocyc":[
"META:HCL",
"META:CL-"
],
"chebi":[
"CHEBI:24635",
"CHEBI:3731",
"CHEBI:13364",
"CHEBI:3616",
"CHEBI:13291",
"CHEBI:17883",
"CHEBI:48804",
"CHEBI:13970",
"CHEBI:5590",
"CHEBI:50315",
"CHEBI:17996"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/8797b51e-be83-48e1-82db-612c84006fdf",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b3225d45-6d2f-4312-a60d-70c87b617ad4"
],
"hmdb":[
"HMDB00492",
"HMDB02073",
"HMDB02306",
"HMDB02162"
],
"inchi_key":[
"VEXZGXHMUGYJMC-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00698",
"C01327"
],
"kegg.drug":[
"D02057"
],
"metanetx.chemical":[
"MNXM43"
],
"reactome.compound":[
"29572",
"188972",
"3301973",
"352022",
"2731020",
"2731008",
"2730999"
],
"sabiork":[
"2270",
"51"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00099"
]
}
},
{
"id":"cl_e",
"name":"Chloride",
"compartment":"e",
"charge":-1,
"formula":"Cl",
"notes":{
"original_bigg_ids":[
"cl_e"
]
},
"annotation":{
"bigg.metabolite":[
"cl"
],
"biocyc":[
"META:HCL",
"META:CL-"
],
"chebi":[
"CHEBI:24635",
"CHEBI:3731",
"CHEBI:13364",
"CHEBI:3616",
"CHEBI:13291",
"CHEBI:17883",
"CHEBI:48804",
"CHEBI:13970",
"CHEBI:5590",
"CHEBI:50315",
"CHEBI:17996"
],
"envipath":[
"5882df9c-dae1-4d80-a40e-db4724271456/compound/8797b51e-be83-48e1-82db-612c84006fdf",
"32de3cf4-e3e6-4168-956e-32fa5ddb0ce1/compound/b3225d45-6d2f-4312-a60d-70c87b617ad4"
],
"hmdb":[
"HMDB00492",
"HMDB02073",
"HMDB02306",
"HMDB02162"
],
"inchi_key":[
"VEXZGXHMUGYJMC-UHFFFAOYSA-M"
],
"kegg.compound":[
"C00698",
"C01327"
],
"kegg.drug":[
"D02057"
],
"metanetx.chemical":[
"MNXM43"
],
"reactome.compound":[
"29572",
"188972",
"3301973",
"352022",
"2731020",
"2731008",
"2730999"
],
"sabiork":[
"2270",
"51"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00099"
]
}
},
{
"id":"k_u",
"name":"Potassium",
"compartment":"u",
"charge":1,
"formula":"K",
"notes":{
"original_bigg_ids":[
"k_u"
]
},
"annotation":{
"bigg.metabolite":[
"k"
],
"biocyc":[
"META:K+"
],
"chebi":[
"CHEBI:26219",
"CHEBI:29103",
"CHEBI:8345",
"CHEBI:49685"
],
"hmdb":[
"HMDB00586"
],
"inchi_key":[
"NPYPAHLBTDXSSS-UHFFFAOYSA-N"
],
"kegg.compound":[
"C00238"
],
"kegg.drug":[
"D08403"
],
"metanetx.chemical":[
"MNXM95"
],
"reactome.compound":[
"74126",
"5626313",
"29804"
],
"sabiork":[
"21"
],
"sbo":"SBO:0000247",
"seed.compound":[
"cpd00205"
]
}
},
{
"id":"ps2d1_um",
"name":"PSII D1 protein",
"compartment":"um",
"formula":"R",
"notes":{
"original_bigg_ids":[
"ps2d1_um"
]
},
"annotation":{
"bigg.metabolite":[
"ps2d1"
],
"sbo":"SBO:0000247"
}
},
{
"id":"ps2d1_exc_um",
"name":"Damaged PSII D1 protein",
"compartment":"um",
"formula":"R",
"notes":{
"original_bigg_ids":[
"ps2d1_exc_um"
]
},
"annotation":{
"bigg.metabolite":[
"ps2d1_exc"
],
"sbo":"SBO:0000247"
}
}
],
"reactions":[
{
"id":"EX_gln__L_e",
"name":"L-Glutamine exchange",
"metabolites":{
"gln__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_gln__L_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_gln__L_e"
],
"biocyc":[
"META:TRANS-RXN-233"
],
"metanetx.reaction":[
"MNXR100259"
],
"reactome.reaction":[
"R-HSA-212651",
"R-BTA-212614",
"R-RNO-212614",
"R-SSC-212614",
"R-MMU-212614",
"R-HSA-212614",
"R-GGA-212614",
"R-CFA-212614",
"R-TGU-212614",
"R-SCE-212614"
],
"sabiork":[
"13421"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08625",
"rxn10928"
]
}
},
{
"id":"EX_hco3_e",
"name":"EX hco3 LPAREN e RPAREN ",
"metabolites":{
"hco3_e":-1.0
},
"lower_bound":-1.99,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_hco3_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_hco3_e"
],
"metanetx.reaction":[
"MNXR100484"
],
"reactome.reaction":[
"R-HSA-2752067",
"R-CFA-2752067",
"R-MMU-2752067",
"R-SSC-2752067",
"R-DRE-2752067",
"R-CEL-2752067",
"R-BTA-2752067",
"R-RNO-2752067",
"R-GGA-2752067",
"R-TGU-2752067",
"R-XTR-2752067",
"R-DME-2752067"
],
"rhea":[
"28697",
"28698",
"28695",
"28696"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn13310",
"rxn10826"
]
}
},
{
"id":"EX_mn2_e",
"name":"Mn2+ exchange",
"metabolites":{
"mn2_e":-1.0
},
"lower_bound":-0.0009,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_mn2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_mn2_e"
],
"biocyc":[
"META:RXN0-16",
"META:TRANS-RXN0-487"
],
"metanetx.reaction":[
"MNXR101670"
],
"rhea":[
"28702",
"28699",
"28700",
"28701"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08952",
"rxn08947"
]
}
},
{
"id":"EX_arg__L_e",
"name":"L-Arginine exchange",
"metabolites":{
"arg__L_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_arg__L_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_arg__L_e"
],
"biocyc":[
"META:RXN66-448"
],
"metanetx.reaction":[
"MNXR95951"
],
"rhea":[
"32145",
"32143",
"32144",
"32146"
],
"sabiork":[
"7983"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn10840",
"rxn08155"
]
}
},
{
"id":"ADPT",
"name":"Adenine phosphoribosyltransferase",
"metabolites":{
"ade_c":-1.0,
"amp_c":1.0,
"ppi_c":1.0,
"prpp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Synpcc7942_2454",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"ADPT"
]
},
"annotation":{
"bigg.reaction":[
"ADPT"
],
"biocyc":[
"META:ADENPRIBOSYLTRAN-RXN"
],
"ec-code":[
"2.4.2.8",
"2.4.2.7"
],
"kegg.reaction":[
"R00190"
],
"metanetx.reaction":[
"MNXR95482"
],
"reactome.reaction":[
"R-RNO-74213",
"R-ATH-74213",
"R-BTA-74213",
"R-XTR-74213",
"R-HSA-74213",
"R-SCE-74213",
"R-GGA-74213",
"R-CFA-74213",
"R-OSA-74213",
"R-TGU-74213",
"R-SSC-74213",
"R-SPO-74213",
"R-CEL-74213",
"R-DRE-74213",
"R-DDI-74213",
"R-MMU-74213",
"R-DME-74213"
],
"rhea":[
"16610",
"16612",
"16611",
"16609"
],
"sabiork":[
"80"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00139"
]
}
},
{
"id":"O2tcx",
"name":"Oxygen transport into the carboxyzome via diffusion",
"metabolites":{
"o2_c":-1.0,
"o2_cx":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: carboxyzome",
"notes":{
"original_bigg_ids":[
"O2tcx"
]
},
"annotation":{
"bigg.reaction":[
"O2tcx"
],
"sbo":"SBO:0000185"
}
},
{
"id":"AOXPBDC",
"name":"2-Amino-3-oxo-4-phosphonooxybutyrate decarboxylation (spontaneous)",
"metabolites":{
"2a3pp_c":-1.0,
"3a2oxpp_c":1.0,
"co2_c":1.0,
"h_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Vitamin B6",
"notes":{
"original_bigg_ids":[
"AOXPBDC"
]
},
"annotation":{
"bigg.reaction":[
"AOXPBDC"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DNTPPA",
"name":"Dihydroneopterin triphosphate pyrophosphatase",
"metabolites":{
"ahdt_c":-1.0,
"dhpmp_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"DNTPPA"
]
},
"annotation":{
"bigg.reaction":[
"DNTPPA"
],
"biocyc":[
"META:H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN"
],
"ec-code":[
"3.6.1.67"
],
"kegg.reaction":[
"R04638"
],
"metanetx.reaction":[
"MNXR97680"
],
"rhea":[
"25302",
"25305",
"25303",
"25304"
],
"sabiork":[
"10428"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03173"
]
}
},
{
"id":"CBMD",
"name":"Carbamate deaminase",
"metabolites":{
"cbm_c":-1.0,
"co2_c":1.0,
"h_c":-2.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Nitrogen metabolism",
"notes":{
"original_bigg_ids":[
"CBMD"
]
},
"annotation":{
"bigg.reaction":[
"CBMD"
],
"biocyc":[
"META:RXN0-5222"
],
"ec-code":[
"4.2.1.104",
"3.5.1.110"
],
"kegg.reaction":[
"R07316"
],
"metanetx.reaction":[
"MNXR96481"
],
"rhea":[
"15652",
"15651",
"15649",
"15650"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05064"
]
}
},
{
"id":"BIOMASS_PIGMENTS",
"name":"Biomass: pigments and xanthophylls",
"metabolites":{
"bm_pigm_c":1.0,
"calxan_c":-0.1707,
"caro_c":-0.1138,
"cholphya_c":-0.5691,
"hpdcn_c":-0.5691,
"nstxan_c":-0.0569,
"phycy_c":-0.0524,
"zeax_c":-0.2276
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_PIGMENTS"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_PIGMENTS"
],
"sbo":"SBO:0000629"
}
},
{
"id":"H2Otu_syn",
"name":"H2O transport via diffusion (tilacoid)",
"metabolites":{
"h2o_c":1.0,
"h2o_u":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Thylakoid Membrane",
"notes":{
"original_bigg_ids":[
"H2Otu_syn"
]
},
"annotation":{
"bigg.reaction":[
"H2Otu_syn"
],
"biocyc":[
"META:TRANS-RXN-145",
"META:TRANS-RXN0-547"
],
"metanetx.reaction":[
"MNXR98641"
],
"reactome.reaction":[
"R-ATH-507868",
"R-CFA-432054",
"R-CFA-432010",
"R-RNO-507868",
"R-OSA-432065",
"R-GGA-432010",
"R-SPO-445714",
"R-PFA-445714",
"R-CFA-432065",
"R-GGA-432067",
"R-TGU-432054",
"R-TGU-445714",
"R-OSA-507868",
"R-DRE-507868",
"R-SPO-507868",
"R-BTA-432054",
"R-GGA-507870",
"R-OSA-432010",
"R-DME-432065",
"R-DRE-432067",
"R-PFA-507868",
"R-SSC-432054",
"R-HSA-432065",
"R-OSA-507870",
"R-HSA-432054",
"R-SSC-432065",
"R-CEL-507868",
"R-XTR-507868",
"R-ATH-507870",
"R-SCE-432065",
"R-BTA-507870",
"R-DME-432010",
"R-CFA-445714",
"R-DRE-445714",
"R-BTA-507868",
"R-GGA-507868",
"R-RNO-432054",
"R-RNO-432010",
"R-SSC-432067",
"R-CEL-445714",
"R-DDI-432065",
"R-ATH-432010",
"R-SCE-432054",
"R-MMU-432065",
"R-MMU-445714",
"R-GGA-432065",
"R-HSA-432067",
"R-SSC-507870",
"R-SCE-432067",
"R-RNO-507870",
"R-DME-432054",
"R-ATH-432067",
"R-BTA-445714",
"R-DRE-507870",
"R-DME-507868",
"R-DME-507870",
"R-DRE-432010",
"R-MMU-432010",
"R-HSA-445714",
"R-OSA-432054",
"R-RNO-432067",
"R-TGU-432010",
"R-TGU-507868",
"R-DDI-432054",
"R-PFA-507870",
"R-HSA-507870",
"R-XTR-432067",
"R-HSA-432010",
"R-SSC-507868",
"R-SCE-507870",
"R-CEL-507870",
"R-DDI-507868",
"R-DRE-432054",
"R-XTR-507870",
"R-DDI-432010",
"R-BTA-432065",
"R-CFA-432067",
"R-OSA-432067",
"R-ATH-432065",
"R-GGA-445714",
"R-SCE-507868",
"R-TGU-432065",
"R-MMU-432067",
"R-TGU-507870",
"R-CFA-507870",
"R-RNO-432065",
"R-MMU-432054",
"R-MMU-507868",
"R-SPO-507870",
"R-SCE-432010",
"R-MMU-507870",
"R-SSC-445714",
"R-HSA-507868",
"R-DME-432067",
"R-SSC-432010",
"R-TGU-432067",
"R-GGA-432054",
"R-BTA-432010",
"R-SCE-445714",
"R-DDI-507870",
"R-ATH-432054",
"R-DDI-432067",
"R-XTR-445714",
"R-BTA-432067",
"R-CFA-507868",
"R-RNO-445714"
],
"rhea":[
"29668",
"29669",
"29667",
"29670"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08687",
"rxn08686",
"rxn09745",
"rxn09838",
"rxn09874",
"rxn09812",
"rxn09643",
"rxn05319"
]
}
},
{
"id":"DTMPK",
"name":"DTMP kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dtdp_c":1.0,
"dtmp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00470",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"DTMPK"
]
},
"annotation":{
"bigg.reaction":[
"DTMPK"
],
"biocyc":[
"META:DTMPKI-RXN"
],
"ec-code":[
"2.7.4.13",
"2.7.4.12",
"2.7.4.9"
],
"kegg.reaction":[
"R02094"
],
"metanetx.reaction":[
"MNXR97804"
],
"rhea":[
"13520",
"13518",
"13517",
"13519"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01513"
]
}
},
{
"id":"BIOMASS__1",
"name":"Biomass objective function",
"metabolites":{
"adp_c":30.0,
"atp_c":-30.0,
"bm_carbs_c":-0.0977,
"bm_cofactors_c":-0.00119,
"bm_cw_c":-0.0795,
"bm_dna_c":-0.0073,
"bm_memlip_c":-0.159,
"bm_pigm_c":-0.0197,
"bm_pro_c":-0.5112,
"bm_rna_c":-0.1136,
"h2o_c":-30.0,
"h_c":30.0,
"pi_c":30.0
},
"lower_bound":0.0,
"upper_bound":2.0,
"gene_reaction_rule":"",
"objective_coefficient":1.0,
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS__1"
],
"sbo":"SBO:0000629"
}
},
{
"id":"ORNTA",
"name":"Ornithine transaminase",
"metabolites":{
"akg_c":-1.0,
"glu5sa_c":1.0,
"glu__L_c":1.0,
"orn_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Synpcc7942_0034",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ORNTA"
]
},
"annotation":{
"bigg.reaction":[
"ORNTA"
],
"biocyc":[
"META:ORNITHINE-GLU-AMINOTRANSFERASE-RXN"
],
"ec-code":[
"2.6.1.13"
],
"kegg.reaction":[
"R00667"
],
"metanetx.reaction":[
"MNXR102220"
],
"reactome.reaction":[
"R-RNO-70666",
"R-XTR-70654",
"R-OSA-70666",
"R-GGA-70654",
"R-CFA-70666",
"R-DME-70666",
"R-CEL-70666",
"R-MMU-70654",
"R-SPO-70654",
"R-TGU-70654",
"R-DME-70654",
"R-ATH-70654",
"R-BTA-70666",
"R-SSC-70654",
"R-MMU-70666",
"R-OSA-70654",
"R-DDI-70666",
"R-SCE-70666",
"R-DDI-70654",
"R-RNO-70654",
"R-CFA-70654",
"R-PFA-70666",
"R-HSA-70654",
"R-SSC-70666",
"R-GGA-70666",
"R-CEL-70654",
"R-DRE-70654",
"R-TGU-70666",
"R-DRE-70666",
"R-PFA-70654",
"R-XTR-70666",
"R-SPO-70666",
"R-BTA-70654",
"R-HSA-70666",
"R-ATH-70666",
"R-SCE-70654"
],
"rhea":[
"25163",
"25161",
"25160",
"25162"
],
"sabiork":[
"1047"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00467"
]
}
},
{
"id":"ATPM",
"name":"ATP maintenance requirement",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"ATPM"
]
},
"annotation":{
"bigg.reaction":[
"ATPM"
],
"biocyc":[
"META:ATPASE-RXN"
],
"ec-code":[
"3.6.1.5",
"3.6.3.34",
"3.6.3.20",
"3.6.3.53",
"3.6.3.8",
"3.6.3.32",
"3.6.4.12",
"3.6.3.48",
"3.6.3.40",
"3.6.3.9",
"3.6.3.23",
"3.6.3.22",
"3.6.3.54",
"3.6.3.1",
"3.6.1.8",
"3.6.3.29",
"3.6.3.17",
"3.6.3.50",
"3.6.3.39",
"3.6.3.19",
"3.6.3.4",
"3.6.3.35",
"3.6.3.16",
"3.6.4.4",
"3.6.3.37",
"3.6.4.8",
"3.6.3.31",
"3.6.3.6",
"3.6.4.5",
"3.6.3.52",
"3.6.3.2",
"3.6.3.14",
"3.6.3.51",
"3.6.3.25",
"3.6.3.38",
"3.6.3.33",
"3.6.3.43",
"3.6.4.10",
"3.6.4.13",
"3.6.3.3",
"3.6.3.10",
"3.6.3.24",
"3.6.3.44",
"3.6.3.15",
"3.6.3.5",
"3.6.1.3",
"3.6.1.15",
"3.6.4.2",
"3.6.4.3",
"3.6.3.42",
"3.6.3.11",
"3.6.3.28",
"3.6.3.30",
"3.6.4.1",
"3.6.4.11",
"3.6.3.47",
"3.6.4.6",
"3.6.3.36",
"3.6.3.21",
"3.6.3.12",
"3.6.3.18",
"3.6.3.26",
"3.6.3.27",
"3.6.3.7",
"3.6.4.9",
"3.6.4.7",
"3.6.3.46",
"3.6.3.41",
"3.6.3.49"
],
"kegg.reaction":[
"R00086"
],
"metanetx.reaction":[
"MNXR96131"
],
"rhea":[
"13066",
"13065",
"13068",
"13067"
],
"sabiork":[
"75"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11300",
"rxn09694",
"rxn00062"
]
}
},
{
"id":"ACOATA",
"name":"Acetyl-CoA ACP transacylase",
"metabolites":{
"ACP_c":-1.0,
"acACP_c":1.0,
"accoa_c":-1.0,
"coa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07445",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ACOATA"
]
},
"annotation":{
"bigg.reaction":[
"ACOATA"
],
"biocyc":[
"META:ACP-S-ACETYLTRANSFER-RXN"
],
"ec-code":[
"2.3.1.180",
"2.3.1.85",
"2.3.1.86",
"2.3.1.179",
"2.3.1.-",
"2.3.1.38",
"2.3.1.41"
],
"kegg.reaction":[
"R01624"
],
"metanetx.reaction":[
"MNXR95376"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05349"
]
}
},
{
"id":"5DOAN",
"name":"5'-deoxyadenosine nuclosidase",
"metabolites":{
"5drib_c":1.0,
"ade_c":1.0,
"dad_5_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"5DOAN"
]
},
"annotation":{
"bigg.reaction":[
"5DOAN"
],
"biocyc":[
"META:RXN0-6550"
],
"metanetx.reaction":[
"MNXR95069"
],
"rhea":[
"29862",
"29860",
"29859",
"29861"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn13649",
"rxn08013"
]
}
},
{
"id":"3HAD160",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C16:0)",
"metabolites":{
"3hpalmACP_c":-1.0,
"h2o_c":1.0,
"tpalm2eACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD160"
]
},
"annotation":{
"bigg.reaction":[
"3HAD160"
],
"ec-code":[
"2.3.1.85",
"2.3.1.86",
"4.2.1.61",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04544"
],
"metanetx.reaction":[
"MNXR94881"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05332"
]
}
},
{
"id":"RNDR3",
"name":"Ribonucleoside-diphosphate reductase (CDP)",
"metabolites":{
"cdp_c":-1.0,
"dcdp_c":1.0,
"h2o_c":1.0,
"trdox_c":1.0,
"trdrd_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08210",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"RNDR3"
]
},
"annotation":{
"bigg.reaction":[
"RNDR3"
],
"biocyc":[
"META:CDPREDUCT-RXN"
],
"ec-code":[
"1.17.4.1"
],
"kegg.reaction":[
"R02024"
],
"metanetx.reaction":[
"MNXR104064"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06076"
]
}
},
{
"id":"Htex",
"name":"Proton transport via diffusion (extracellular to periplasm)",
"metabolites":{
"h_e":-1.0,
"h_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"Htex"
]
},
"annotation":{
"bigg.reaction":[
"Htex"
],
"biocyc":[
"META:RXN-14452"
],
"metanetx.reaction":[
"MNXR100765"
],
"reactome.reaction":[
"R-HSA-2534378",
"R-DDI-74723",
"R-BTA-170026",
"R-CFA-170026",
"R-SCE-74723",
"R-DRE-74723",
"R-HSA-170026",
"R-TGU-2534378",
"R-HSA-74723",
"R-CFA-2534378",
"R-TGU-74723",
"R-OSA-170026",
"R-RNO-2534378",
"R-GGA-2534378",
"R-MMU-2534378",
"R-BTA-2534378",
"R-SSC-2534378",
"R-DRE-170026",
"R-TGU-170026",
"R-GGA-170026",
"R-SCE-170026",
"R-DRE-2534378",
"R-BTA-74723",
"R-SPO-74723",
"R-XTR-74723",
"R-RNO-74723",
"R-XTR-2534378",
"R-MMU-74723",
"R-CFA-74723",
"R-GGA-74723",
"R-CEL-170026",
"R-MMU-170026",
"R-ATH-74723",
"R-DME-74723",
"R-PFA-74723",
"R-SSC-74723",
"R-XTR-170026",
"R-SSC-170026",
"R-CEL-74723",
"R-ATH-170026",
"R-RNO-170026",
"R-DME-170026"
],
"rhea":[
"34980",
"34981",
"34982",
"34979"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn11009",
"rxn08730"
]
}
},
{
"id":"G5SD",
"name":"Glutamate-5-semialdehyde dehydrogenase",
"metabolites":{
"glu5p_c":-1.0,
"glu5sa_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11385 or SYNPCC7942_RS11510",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"G5SD"
]
},
"annotation":{
"bigg.reaction":[
"G5SD"
],
"biocyc":[
"META:GLUTSEMIALDEHYDROG-RXN"
],
"ec-code":[
"1.2.1.41"
],
"kegg.reaction":[
"R03313"
],
"metanetx.reaction":[
"MNXR99896"
],
"rhea":[
"19541",
"19543",
"19544",
"19542"
],
"sabiork":[
"3127"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02373"
]
}
},
{
"id":"HISTDa",
"name":"Histidinol dehydrogenase step (Histidinal forming)",
"metabolites":{
"h_c":1.0,
"histd_c":-1.0,
"histda_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07765",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"HISTDa"
]
},
"annotation":{
"bigg.reaction":[
"HISTDa"
],
"sbo":"SBO:0000176"
}
},
{
"id":"TRPS3",
"name":"Tryptophan synthase (indoleglycerol phosphate)",
"metabolites":{
"3ig3p_c":-1.0,
"g3p_c":1.0,
"indole_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02095 and SYNPCC7942_RS10880",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"TRPS3"
]
},
"annotation":{
"bigg.reaction":[
"TRPS3"
],
"biocyc":[
"META:RXN0-2381"
],
"ec-code":[
"4.1.2.8",
"4.2.1.20"
],
"kegg.reaction":[
"R02340"
],
"metanetx.reaction":[
"MNXR99889"
],
"rhea":[
"14082",
"14081",
"14083",
"14084"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01682"
]
}
},
{
"id":"DMBZIDS2",
"name":"5,6-dimethylbenzimidazole synthase",
"metabolites":{
"dialurate_c":1.0,
"dmbzid_c":1.0,
"e4p_c":1.0,
"fmnh2_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10185 or SYNPCC7942_RS08460",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"DMBZIDS2"
]
},
"annotation":{
"bigg.reaction":[
"DMBZIDS2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HSTPT",
"name":"Histidinol-phosphate transaminase",
"metabolites":{
"akg_c":1.0,
"glu__L_c":-1.0,
"hisp_c":1.0,
"imacp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05290",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"AOOA"
]
},
"annotation":{
"bigg.reaction":[
"HSTPT"
],
"biocyc":[
"META:HISTAMINOTRANS-RXN"
],
"ec-code":[
"2.6.1.9"
],
"kegg.reaction":[
"R03243"
],
"metanetx.reaction":[
"MNXR95852"
],
"rhea":[
"23747",
"23745",
"23744",
"23746"
],
"sabiork":[
"3064"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02320"
]
}
},
{
"id":"ZCAROTDH2",
"name":"Zeta-carotene desaturase(2)",
"metabolites":{
"h2o_c":2.0,
"h_c":-1.0,
"lycop_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"neuspn_c":-1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07730 and SYNPCC7942_RS06385",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"NOR"
]
},
"annotation":{
"bigg.reaction":[
"ZCAROTDH2"
],
"metanetx.reaction":[
"MNXR105275"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ORNDC",
"name":"Ornithine Decarboxylase",
"metabolites":{
"co2_c":1.0,
"h_c":-1.0,
"orn_c":-1.0,
"ptrc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03625",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ORNDC"
]
},
"annotation":{
"bigg.reaction":[
"ORNDC"
],
"biocyc":[
"META:ORNDECARBOX-RXN"
],
"ec-code":[
"4.1.1.17"
],
"kegg.reaction":[
"R00670"
],
"metanetx.reaction":[
"MNXR102209"
],
"reactome.reaction":[
"R-MMU-70692",
"R-OSA-70692",
"R-PFA-70692",
"R-DME-70692",
"R-ATH-70692",
"R-CFA-70692",
"R-XTR-70692",
"R-RNO-70692",
"R-SPO-70692",
"R-GGA-70692",
"R-CEL-70692",
"R-SSC-70692",
"R-BTA-70692",
"R-DRE-70692",
"R-TGU-70692",
"R-DDI-70692",
"R-SCE-70692",
"R-HSA-70692"
],
"rhea":[
"22964",
"22967",
"22965",
"22966"
],
"sabiork":[
"1050"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00470"
]
}
},
{
"id":"GND",
"name":"Phosphogluconate dehydrogenase",
"metabolites":{
"6pgc_c":-1.0,
"co2_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"ru5p__D_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00195",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"GND"
]
},
"annotation":{
"bigg.reaction":[
"GND"
],
"biocyc":[
"META:RXN-9952"
],
"ec-code":[
"1.1.1.44",
"1.1.1.351"
],
"kegg.reaction":[
"R01528"
],
"metanetx.reaction":[
"MNXR100389"
],
"reactome.reaction":[
"R-PFA-71299",
"R-GGA-71299",
"R-HSA-71299",
"R-SPO-71299",
"R-XTR-71299",
"R-ATH-71299",
"R-TGU-71299",
"R-OSA-71299",
"R-MMU-71299",
"R-DRE-71299",
"R-SCE-71299",
"R-SSC-71299",
"R-DDI-71299",
"R-CFA-71299",
"R-DME-71299",
"R-BTA-71299",
"R-CEL-71299"
],
"rhea":[
"10116",
"10117",
"10118",
"10119"
],
"sabiork":[
"108"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01115"
]
}
},
{
"id":"CMPA_1",
"name":"N-carbamoylputrescine amidase",
"metabolites":{
"Ncbmpts_c":-1.0,
"co2_c":1.0,
"h2o_c":-1.0,
"h_c":-2.0,
"nh4_c":1.0,
"ptrc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10895",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"CMPA"
]
},
"annotation":{
"bigg.reaction":[
"CMPA_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"U23GAAT2",
"name":"UDP-3-O-(3-hydroxypalmitoyl)glucosamine acyltransferase (Synechococcus elongatus 7942)",
"metabolites":{
"3hpalmACP_c":-1.0,
"ACP_c":1.0,
"h_c":1.0,
"u23ga2_c":1.0,
"u3hga2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07415",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"U23GAAT2"
]
},
"annotation":{
"bigg.reaction":[
"U23GAAT2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HOXGfx",
"name":"Heme oxygenase 1 (ferredoxin utilizing)",
"metabolites":{
"biliverd_c":1.0,
"co_c":1.0,
"fdxox_c":6.0,
"fdxrd_c":-6.0,
"fe2_c":1.0,
"h2o_c":3.0,
"h_c":-8.0,
"o2_c":-3.0,
"pheme_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09425",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"HOXGfx"
]
},
"annotation":{
"bigg.reaction":[
"HOXGfx"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PGK",
"name":"Phosphoglycerate kinase",
"metabolites":{
"13dpg_c":1.0,
"3pg_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05720",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"PGK"
]
},
"annotation":{
"bigg.reaction":[
"PGK"
],
"biocyc":[
"META:PHOSGLYPHOS-RXN"
],
"ec-code":[
"2.7.2.3"
],
"kegg.reaction":[
"R01512"
],
"metanetx.reaction":[
"MNXR102538"
],
"reactome.reaction":[
"R-ATH-71850",
"R-DME-71850",
"R-GGA-71850",
"R-SPO-71850",
"R-OSA-71850",
"R-GGA-353039",
"R-GGA-353023",
"R-BTA-71850",
"R-CFA-70486",
"R-MMU-71850",
"R-DME-70486",
"R-PFA-71850",
"R-SPO-70486",
"R-SCE-70486",
"R-PFA-70486",
"R-SSC-70486",
"R-ATH-70486",
"R-DRE-70486",
"R-HSA-70486",
"R-OSA-70486",
"R-XTR-71850",
"R-MMU-70486",
"R-RNO-70486",
"R-TGU-70486",
"R-DRE-71850",
"R-SSC-71850",
"R-SCE-71850",
"R-CFA-71850",
"R-XTR-70486",
"R-DDI-70486",
"R-DDI-71850",
"R-RNO-71850",
"R-BTA-70486",
"R-CEL-70486",
"R-HSA-71850",
"R-CEL-71850",
"R-GGA-70486",
"R-TGU-71850"
],
"rhea":[
"14801",
"14804",
"14802",
"14803"
],
"sabiork":[
"7644"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01100"
]
}
},
{
"id":"IMPD",
"name":"IMP dehydrogenase",
"metabolites":{
"h2o_c":-1.0,
"h_c":1.0,
"imp_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"xmp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09290",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"IMPD"
]
},
"annotation":{
"bigg.reaction":[
"IMPD"
],
"biocyc":[
"META:IMP-DEHYDROG-RXN"
],
"ec-code":[
"1.1.1.205"
],
"kegg.reaction":[
"R01130"
],
"metanetx.reaction":[
"MNXR100830"
],
"reactome.reaction":[
"R-BTA-73794",
"R-GGA-421222",
"R-CFA-73794",
"R-GGA-73794",
"R-SCE-73794",
"R-XTR-73794",
"R-SPO-73794",
"R-DME-73794",
"R-TGU-73794",
"R-DRE-73794",
"R-PFA-73794",
"R-ATH-73794",
"R-MMU-73794",
"R-OSA-73794",
"R-RNO-73794",
"R-DDI-73794",
"R-HSA-73794",
"R-SSC-73794"
],
"rhea":[
"11711",
"11710",
"11708",
"11709"
],
"sabiork":[
"128"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00834"
]
}
},
{
"id":"LPOR",
"name":"Light dependent protochlorophyllide oxidoreductase",
"metabolites":{
"chlld_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pchlld_exc_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12700",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"LPOR"
]
},
"annotation":{
"bigg.reaction":[
"LPOR"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CHRPL",
"name":"Chorismate pyruvate lyase",
"metabolites":{
"4hbz_c":1.0,
"chor_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00460",
"subsystem":"Plastoquinol biosynthesis",
"notes":{
"original_bigg_ids":[
"CHRPL"
]
},
"annotation":{
"bigg.reaction":[
"CHRPL"
],
"biocyc":[
"META:CHORPYRLY-RXN"
],
"ec-code":[
"4.1.3.40"
],
"kegg.reaction":[
"R01302"
],
"metanetx.reaction":[
"MNXR96711"
],
"rhea":[
"16508",
"16505",
"16507",
"16506"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00966"
]
}
},
{
"id":"GCALDDy",
"name":"Glycolaldehyde dehydrogenase (NADPH utilizing)",
"metabolites":{
"gcald_c":-1.0,
"glyclt_c":1.0,
"h2o_c":-1.0,
"h_c":2.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02490",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"GCALDDy"
]
},
"annotation":{
"bigg.reaction":[
"GCALDDy"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MSBENZMT",
"name":"S-adenosyl-L-methionine:2-methyl-6-solanyl-1,4-benzoquinol C3  methyltransferase",
"metabolites":{
"2m6sbenzq_c":-1.0,
"ahcys_c":1.0,
"amet_c":-1.0,
"h_c":1.0,
"pqh2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03055",
"subsystem":"Plastoquinol biosynthesis",
"notes":{
"original_bigg_ids":[
"MSBENZMT"
]
},
"annotation":{
"bigg.reaction":[
"MSBENZMT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DESAT18a",
"name":"Stearoyl ACP delta-9 desaturase",
"metabolites":{
"h2o_c":2.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0,
"ocdcaACP_c":-1.0,
"octe9ACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13015",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DESAT18a"
]
},
"annotation":{
"bigg.reaction":[
"DESAT18a"
],
"sbo":"SBO:0000176"
}
},
{
"id":"FUM",
"name":"Fumarase",
"metabolites":{
"fum_c":-1.0,
"h2o_c":-1.0,
"mal__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05170",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"FUM"
]
},
"annotation":{
"bigg.reaction":[
"FUM"
],
"biocyc":[
"META:FUMHYDR-RXN"
],
"ec-code":[
"4.2.1.2"
],
"kegg.reaction":[
"R01082"
],
"metanetx.reaction":[
"MNXR99705"
],
"reactome.reaction":[
"R-TGU-451033",
"R-TGU-70982",
"R-HSA-70982",
"R-ATH-451033",
"R-SPO-70982",
"R-SPO-451033",
"R-XTR-451033",
"R-MMU-70982",
"R-DRE-70982",
"R-DME-70982",
"R-DME-451033",
"R-HSA-451033",
"R-SCE-451033",
"R-DDI-451033",
"R-OSA-451033",
"R-CFA-70982",
"R-XTR-70982",
"R-MMU-451033",
"R-OSA-70982",
"R-BTA-70982",
"R-DRE-451033",
"R-GGA-373141",
"R-RNO-451033",
"R-CEL-451033",
"R-ATH-70982",
"R-GGA-373145",
"R-CEL-70982",
"R-BTA-451033",
"R-SSC-451033",
"R-SCE-70982",
"R-CFA-451033",
"R-RNO-70982",
"R-GGA-70982",
"R-DDI-70982",
"R-GGA-451033",
"R-SSC-70982"
],
"rhea":[
"12463",
"12461",
"12462",
"12460"
],
"sabiork":[
"256"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00799"
]
}
},
{
"id":"PHYFXOR",
"name":"Phycocyanobilin:ferredoxin oxidoreductase",
"metabolites":{
"biliverd_c":-1.0,
"fdxox_c":4.0,
"fdxrd_c":-4.0,
"h_c":-4.0,
"phycy_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06275",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PHYFXOR"
]
},
"annotation":{
"bigg.reaction":[
"PHYFXOR"
],
"sbo":"SBO:0000176"
}
},
{
"id":"TMPPP_1",
"name":"Thiamine-phosphate diphoshorylase",
"metabolites":{
"2mahmp_c":-1.0,
"co2_c":1.0,
"cthzp_c":-1.0,
"h_c":-2.0,
"ppi_c":1.0,
"thmmp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05420",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"TMPPP"
]
},
"annotation":{
"bigg.reaction":[
"TMPPP_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"VPAMTr",
"name":"Valine-pyruvate aminotransferase",
"metabolites":{
"3mob_c":-1.0,
"ala__L_c":-1.0,
"pyr_c":1.0,
"val__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11475",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"VPAMTr"
]
},
"annotation":{
"bigg.reaction":[
"VPAMTr"
],
"biocyc":[
"META:VALINE-PYRUVATE-AMINOTRANSFER-RXN"
],
"ec-code":[
"2.6.1.66"
],
"kegg.reaction":[
"R01215"
],
"metanetx.reaction":[
"MNXR105217"
],
"rhea":[
"22915",
"22914",
"22912",
"22913"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00904"
]
}
},
{
"id":"RNDR1",
"name":"Ribonucleoside-diphosphate reductase (ADP)",
"metabolites":{
"adp_c":-1.0,
"dadp_c":1.0,
"h2o_c":1.0,
"trdox_c":1.0,
"trdrd_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08210",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"RNDR1"
]
},
"annotation":{
"bigg.reaction":[
"RNDR1"
],
"biocyc":[
"META:ADPREDUCT-RXN"
],
"ec-code":[
"1.17.4.1"
],
"kegg.reaction":[
"R02017"
],
"metanetx.reaction":[
"MNXR104060"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05231"
]
}
},
{
"id":"TALA",
"name":"Transaldolase",
"metabolites":{
"e4p_c":1.0,
"f6p_c":1.0,
"g3p_c":-1.0,
"s7p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11675",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"TALA"
]
},
"annotation":{
"bigg.reaction":[
"TALA"
],
"biocyc":[
"META:TRANSALDOL-RXN"
],
"ec-code":[
"2.2.1.2"
],
"kegg.reaction":[
"R01827"
],
"metanetx.reaction":[
"MNXR104715"
],
"rhea":[
"17056",
"17055",
"17054",
"17053"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLYCL",
"name":"Glycine Cleavage System",
"metabolites":{
"co2_c":1.0,
"gly_c":-1.0,
"mlthf_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"nh4_c":1.0,
"thf_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10380 and SYNPCC7942_RS10385 and SYNPCC7942_RS11730",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"GLYCL"
]
},
"annotation":{
"bigg.reaction":[
"GLYCL"
],
"ec-code":[
"1.4.4.2",
"1.8.1.4",
"2.1.2.10"
],
"kegg.reaction":[
"R01221"
],
"metanetx.reaction":[
"MNXR100330"
],
"rhea":[
"27760",
"27759",
"27761",
"27758"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACONT",
"name":"Aconitate hydratase",
"metabolites":{
"cit_c":-1.0,
"icit_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04655",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"ACONT"
]
},
"annotation":{
"bigg.reaction":[
"ACONT"
],
"ec-code":[
"4.2.1.3"
],
"kegg.reaction":[
"R01324"
],
"metanetx.reaction":[
"MNXR95384"
],
"rhea":[
"10339",
"10336",
"10337",
"10338"
],
"sabiork":[
"272"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00973"
]
}
},
{
"id":"NDPK7",
"name":"Nucleoside-diphosphate kinase (ATP:dCDP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dcdp_c":-1.0,
"dctp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK7"
]
},
"annotation":{
"bigg.reaction":[
"NDPK7"
],
"biocyc":[
"META:DCDPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R02326"
],
"metanetx.reaction":[
"MNXR101939"
],
"rhea":[
"27678",
"27681",
"27680",
"27679"
],
"sabiork":[
"422"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01673"
]
}
},
{
"id":"GTPCI",
"name":"GTP cyclohydrolase I",
"metabolites":{
"ahdt_c":1.0,
"for_c":1.0,
"gtp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08155",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"GTPCI"
]
},
"annotation":{
"bigg.reaction":[
"GTPCI"
],
"biocyc":[
"META:GTP-CYCLOHYDRO-I-RXN"
],
"ec-code":[
"3.5.4.16"
],
"kegg.reaction":[
"R00424"
],
"metanetx.reaction":[
"MNXR100453"
],
"reactome.reaction":[
"R-ATH-1474146",
"R-TGU-1474146",
"R-DRE-1474146",
"R-DDI-1474146",
"R-XTR-1474146",
"R-DME-1474146",
"R-MMU-1474146",
"R-CEL-1474146",
"R-PFA-1474146",
"R-RNO-1474146",
"R-HSA-1474146",
"R-BTA-1474146",
"R-SPO-1474146",
"R-GGA-1474146",
"R-OSA-1474146",
"R-CFA-1474146",
"R-SCE-1474146"
],
"rhea":[
"17476",
"17473",
"17474",
"17475"
],
"sabiork":[
"9177"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00299",
"rxn11232"
]
}
},
{
"id":"AIRC2",
"name":"Phosphoribosylaminoimidazole carboxylase",
"metabolites":{
"5caiz_c":1.0,
"adp_c":1.0,
"air_c":-1.0,
"atp_c":-1.0,
"h_c":1.0,
"hco3_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07305",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"AIRC2"
]
},
"annotation":{
"bigg.reaction":[
"AIRC2"
],
"ec-code":[
"6.3.4.18"
],
"metanetx.reaction":[
"MNXR95644"
],
"rhea":[
"19318",
"19320",
"19319",
"19317"
],
"sbo":"SBO:0000176"
}
},
{
"id":"IGPS",
"name":"Indole-3-glycerol-phosphate synthase",
"metabolites":{
"2cpr5p_c":-1.0,
"3ig3p_c":1.0,
"co2_c":1.0,
"h2o_c":1.0,
"h_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06130",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"IGPS"
]
},
"annotation":{
"bigg.reaction":[
"IGPS"
],
"biocyc":[
"META:IGPSYN-RXN"
],
"ec-code":[
"4.1.1.48"
],
"kegg.reaction":[
"R03508"
],
"metanetx.reaction":[
"MNXR100814"
],
"rhea":[
"23476",
"23479",
"23477",
"23478"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02507"
]
}
},
{
"id":"MTAP",
"name":"5  methylthioadenosine phosphorylase",
"metabolites":{
"5mdr1p_c":1.0,
"5mta_c":-1.0,
"ade_c":1.0,
"pi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04750",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"MTAP"
]
},
"annotation":{
"bigg.reaction":[
"MTAP"
],
"biocyc":[
"META:5-METHYLTHIOADENOSINE-PHOSPHORYLASE-RXN"
],
"ec-code":[
"2.4.2.28"
],
"kegg.reaction":[
"R01402"
],
"metanetx.reaction":[
"MNXR101745"
],
"reactome.reaction":[
"R-DRE-1237160",
"R-SSC-1237160",
"R-BTA-1237160",
"R-XTR-1237160",
"R-DME-1237160",
"R-CEL-1237160",
"R-CFA-1237160",
"R-SCE-1237160",
"R-SPO-1237160",
"R-HSA-1237160",
"R-MMU-1237160",
"R-RNO-1237160",
"R-TGU-1237160",
"R-GGA-1237160"
],
"rhea":[
"11853",
"11855",
"11852",
"11854"
],
"sabiork":[
"1594"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01022"
]
}
},
{
"id":"HEMEAS_1",
"name":"Heme A synthase",
"metabolites":{
"h2o_c":-1.0,
"h_c":2.0,
"hemeA_c":1.0,
"hemeO_c":-1.0,
"nad_c":-2.0,
"nadh_c":2.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13250",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"HEMEAS"
]
},
"annotation":{
"bigg.reaction":[
"HEMEAS_1"
],
"ec-code":[
"1.3"
],
"kegg.reaction":[
"R07412"
],
"metanetx.reaction":[
"MNXR100591"
],
"reactome.reaction":[
"R-SCE-2995334",
"R-DRE-2995334",
"R-GGA-2995334",
"R-SPO-2995334",
"R-TGU-2995334",
"R-DDI-2995334",
"R-DME-2995334",
"R-RNO-2995334",
"R-XTR-2995334",
"R-BTA-2995334",
"R-MMU-2995334",
"R-HSA-2995334",
"R-CEL-2995334",
"R-ATH-2995334",
"R-PFA-2995334",
"R-CFA-2995334",
"R-SSC-2995334",
"R-OSA-2995334"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn12825",
"rxn05121"
]
}
},
{
"id":"DHORD3um",
"name":"Dihydoorotic acid dehydrogenase (plastoquinone)",
"metabolites":{
"dhor__S_c":-1.0,
"orot_c":1.0,
"pq_um":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01475",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"DHORD3um"
]
},
"annotation":{
"bigg.reaction":[
"DHORD3um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MTHFC",
"name":"Methenyltetrahydrofolate cyclohydrolase",
"metabolites":{
"10fthf_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"methf_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04030",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"MTHFC"
]
},
"annotation":{
"bigg.reaction":[
"MTHFC"
],
"ec-code":[
"3.5.4.9",
"1.5.1.15"
],
"kegg.reaction":[
"R01655"
],
"metanetx.reaction":[
"MNXR101748"
],
"reactome.reaction":[
"R-DRE-6801462",
"R-SCE-6801462",
"R-OSA-6801462",
"R-SSC-6801462",
"R-ATH-6801462",
"R-MMU-6801462",
"R-RNO-6801462",
"R-CFA-6801462",
"R-DDI-6801462",
"R-GGA-6801462",
"R-HSA-6801462",
"R-TGU-6801462",
"R-BTA-6801462",
"R-DME-6801462",
"R-XTR-6801462"
],
"rhea":[
"23701",
"23700",
"23702",
"23703"
],
"sabiork":[
"74"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01211"
]
}
},
{
"id":"HBZNPT",
"name":"Hydroxybenzoate nonaprenyltransferase",
"metabolites":{
"3nphb_c":1.0,
"4hbz_c":-1.0,
"npdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09965",
"subsystem":"Plastoquinol biosynthesis",
"notes":{
"original_bigg_ids":[
"HBZNPT"
]
},
"annotation":{
"bigg.reaction":[
"HBZNPT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GCATENEC",
"name":"Gamma carotene bcyclase",
"metabolites":{
"caro_c":1.0,
"gcarote_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10460",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"LYCBC2"
]
},
"annotation":{
"bigg.reaction":[
"GCATENEC"
],
"biocyc":[
"META:RXN1F-151"
],
"ec-code":[
"5.5.1.19"
],
"kegg.reaction":[
"R03824"
],
"metanetx.reaction":[
"MNXR100063"
],
"rhea":[
"32239",
"32241",
"32242",
"32240"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11574"
]
}
},
{
"id":"COCHL_1",
"name":"Cobaltochelatase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"co2dam_c":1.0,
"cobalt2_c":-1.0,
"h2o_c":-1.0,
"h_c":3.0,
"hgbam_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00495 and SYNPCC7942_RS04275",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"COCHL"
]
},
"annotation":{
"bigg.reaction":[
"COCHL_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HSDy",
"name":"Homoserine dehydrogenase (NADPH)",
"metabolites":{
"aspsa_c":1.0,
"h_c":1.0,
"hom__L_c":-1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS10595",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"HSDyi"
]
},
"annotation":{
"bigg.reaction":[
"HSDy"
],
"ec-code":[
"1.1.1.3"
],
"kegg.reaction":[
"R01775"
],
"metanetx.reaction":[
"MNXR100734"
],
"rhea":[
"15761",
"15764",
"15763",
"15762"
],
"sabiork":[
"1868"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01302"
]
}
},
{
"id":"TRPS1",
"name":"Tryptophan synthase (indoleglycerol phosphate)",
"metabolites":{
"3ig3p_c":-1.0,
"g3p_c":1.0,
"h2o_c":1.0,
"ser__L_c":-1.0,
"trp__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02095 and SYNPCC7942_RS10880",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"TRPS1"
]
},
"annotation":{
"bigg.reaction":[
"TRPS1"
],
"biocyc":[
"META:TRYPSYN-RXN"
],
"ec-code":[
"4.2.1.20"
],
"kegg.reaction":[
"R02722"
],
"metanetx.reaction":[
"MNXR104343"
],
"rhea":[
"10535",
"10533",
"10534",
"10532"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01964"
]
}
},
{
"id":"HISTDb",
"name":"Histidinol dehydrogenase (histidine forming)",
"metabolites":{
"h2o_c":-1.0,
"h_c":2.0,
"his__L_c":1.0,
"histda_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07765",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"HISTDb"
]
},
"annotation":{
"bigg.reaction":[
"HISTDb"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UPPDC1",
"name":"Uroporphyrinogen decarboxylase (uroporphyrinogen III)",
"metabolites":{
"co2_c":4.0,
"cpppg3_c":1.0,
"h_c":-4.0,
"uppg3_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05575",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"UPPDC1"
]
},
"annotation":{
"bigg.reaction":[
"UPPDC1"
],
"biocyc":[
"META:UROGENDECARBOX-RXN"
],
"ec-code":[
"4.1.1.37"
],
"kegg.reaction":[
"R03197"
],
"metanetx.reaction":[
"MNXR105140"
],
"reactome.reaction":[
"R-GGA-421515",
"R-DME-189425",
"R-BTA-189425",
"R-SSC-189425",
"R-DDI-189425",
"R-RNO-189425",
"R-SPO-189425",
"R-OSA-189425",
"R-GGA-189425",
"R-HSA-189425",
"R-SCE-189425",
"R-MMU-189425",
"R-PFA-189425",
"R-XTR-189425",
"R-TGU-189425",
"R-CFA-189425",
"R-DRE-189425",
"R-ATH-189425"
],
"rhea":[
"19868",
"19865",
"19867",
"19866"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02288"
]
}
},
{
"id":"GARFT",
"name":"Phosphoribosylglycinamide formyltransferase",
"metabolites":{
"10fthf_c":-1.0,
"fgam_c":1.0,
"gar_c":-1.0,
"h_c":1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04925",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"GARFT"
]
},
"annotation":{
"bigg.reaction":[
"GARFT"
],
"ec-code":[
"2.1.2.2"
],
"kegg.reaction":[
"R04325"
],
"metanetx.reaction":[
"MNXR99623"
],
"rhea":[
"15053",
"15054",
"15055",
"15056"
],
"sbo":"SBO:0000176"
}
},
{
"id":"H4THDPR",
"name":"4-hydroxy-tetrahydrodipicolinate reductase",
"metabolites":{
"4hthdp_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"thdp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10835",
"subsystem":"Amino acid metabolism: Lysine biosynthesis",
"notes":{
"original_bigg_ids":[
"H4THDPR"
]
},
"annotation":{
"bigg.reaction":[
"H4THDPR"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UDPG4E",
"name":"UDPglucose 4-epimerase",
"metabolites":{
"udpg_c":-1.0,
"udpgal_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01630",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"UDPG4E"
]
},
"annotation":{
"bigg.reaction":[
"UDPG4E"
],
"biocyc":[
"META:UDPGLUCEPIM-RXN"
],
"ec-code":[
"5.1.3.2"
],
"kegg.reaction":[
"R00291"
],
"metanetx.reaction":[
"MNXR143428"
],
"reactome.reaction":[
"R-CEL-70369",
"R-SSC-70369",
"R-ATH-70369",
"R-TGU-70369",
"R-HSA-70369",
"R-DRE-70369",
"R-RNO-70369",
"R-DDI-70369",
"R-BTA-70369",
"R-SCE-70369",
"R-DME-70369",
"R-SPO-70369",
"R-CFA-70369",
"R-MMU-70369",
"R-GGA-70369",
"R-XTR-70369",
"R-OSA-70369"
],
"rhea":[
"22170",
"22168",
"22169",
"22171"
],
"sabiork":[
"70",
"8974"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00214"
]
}
},
{
"id":"GLCS3",
"name":"Glycogen synthase (linear extension of glycogen polymer)",
"metabolites":{
"14glucan_c":1.0,
"adp_c":1.0,
"adpglc_c":-1.0,
"amylose_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12785",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"GLCS3"
]
},
"annotation":{
"bigg.reaction":[
"GLCS3"
],
"sbo":"SBO:0000176"
}
},
{
"id":"AICART",
"name":"Phosphoribosylaminoimidazolecarboxamide formyltransferase",
"metabolites":{
"10fthf_c":-1.0,
"aicar_c":-1.0,
"fprica_c":1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02020",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"AICART"
]
},
"annotation":{
"bigg.reaction":[
"AICART"
],
"ec-code":[
"2.1.2.3"
],
"kegg.reaction":[
"R04560"
],
"metanetx.reaction":[
"MNXR95639"
],
"reactome.reaction":[
"R-BTA-73798",
"R-CFA-73798",
"R-DDI-73798",
"R-GGA-419254",
"R-SCE-73798",
"R-DRE-73798",
"R-TGU-73798",
"R-ATH-73798",
"R-HSA-73798",
"R-MMU-73798",
"R-DME-73798",
"R-OSA-73798",
"R-SPO-73798",
"R-SSC-73798",
"R-XTR-73798",
"R-RNO-73798",
"R-GGA-73798"
],
"rhea":[
"22192",
"22193",
"22195",
"22194"
],
"sabiork":[
"122"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ASPTA",
"name":"Aspartate transaminase",
"metabolites":{
"akg_c":-1.0,
"asp__L_c":-1.0,
"glu__L_c":1.0,
"oaa_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12930",
"subsystem":"Amino acid metabolism: Alanine, Aspartate and Glutamate metabolism",
"notes":{
"original_bigg_ids":[
"ASPTA"
]
},
"annotation":{
"bigg.reaction":[
"ASPTA"
],
"biocyc":[
"META:RXN-13697",
"META:ASPAMINOTRANS-RXN"
],
"ec-code":[
"2.6.1.1"
],
"kegg.reaction":[
"R00355"
],
"metanetx.reaction":[
"MNXR96079"
],
"reactome.reaction":[
"R-DME-70613",
"R-XTR-70581",
"R-CEL-70613",
"R-OSA-70613",
"R-BTA-70613",
"R-DDI-70613",
"R-DRE-70581",
"R-DRE-70613",
"R-SCE-70592",
"R-SPO-70596",
"R-SPO-70581",
"R-GGA-70592",
"R-HSA-70613",
"R-HSA-70592",
"R-DRE-70592",
"R-XTR-70592",
"R-DME-70592",
"R-CFA-70613",
"R-HSA-70596",
"R-PFA-70596",
"R-CEL-70592",
"R-CEL-70581",
"R-MMU-70596",
"R-MMU-70613",
"R-DRE-70596",
"R-ATH-70596",
"R-OSA-70596",
"R-ATH-70613",
"R-PFA-70613",
"R-TGU-70596",
"R-RNO-70581",
"R-TGU-70613",
"R-DME-70596",
"R-CFA-70596",
"R-SCE-70613",
"R-TGU-70581",
"R-SCE-70581",
"R-DME-70581",
"R-SPO-70613",
"R-SSC-70596",
"R-BTA-70592",
"R-XTR-70596",
"R-RNO-70613",
"R-XTR-70613",
"R-GGA-372717",
"R-CFA-70581",
"R-MMU-70592",
"R-PFA-70592",
"R-SSC-70592",
"R-BTA-70581",
"R-SPO-70592",
"R-DDI-70596",
"R-SSC-70613",
"R-CEL-70596",
"R-SSC-70581",
"R-RNO-70596",
"R-SCE-70596",
"R-GGA-70596",
"R-GGA-372559",
"R-CFA-70592",
"R-BTA-70596",
"R-PFA-70581",
"R-MMU-70581",
"R-RNO-70592",
"R-GGA-70613",
"R-HSA-70581",
"R-GGA-372564",
"R-GGA-70581",
"R-TGU-70592",
"R-GGA-372719"
],
"rhea":[
"21824",
"21827",
"21825",
"21826"
],
"sabiork":[
"825"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00260"
]
}
},
{
"id":"GLYOX",
"name":"Hydroxyacylglutathione hydrolase",
"metabolites":{
"gthrd_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"lac__D_c":1.0,
"lgt__S_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04820 or SYNPCC7942_RS07180",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"GLYOX"
]
},
"annotation":{
"bigg.reaction":[
"GLYOX"
],
"biocyc":[
"META:GLYOXII-RXN"
],
"ec-code":[
"3.1.2.6"
],
"kegg.reaction":[
"R01736"
],
"metanetx.reaction":[
"MNXR100353"
],
"rhea":[
"25246",
"25247",
"25245",
"25248"
],
"sabiork":[
"9752",
"283"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01274"
]
}
},
{
"id":"PRAGSr",
"name":"Phosphoribosylglycinamide synthase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"gar_c":1.0,
"gly_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"pram_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04760",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"PRAGSr"
]
},
"annotation":{
"bigg.reaction":[
"PRAGSr"
],
"biocyc":[
"META:GLYRIBONUCSYN-RXN"
],
"ec-code":[
"6.3.4.13"
],
"kegg.reaction":[
"R04144"
],
"metanetx.reaction":[
"MNXR103139"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02895"
]
}
},
{
"id":"SQD1",
"name":"UDP-6-sulfo-6-deoxyglucose sulfohydrolase",
"metabolites":{
"h2o_c":1.0,
"h_c":-1.0,
"so3_c":-1.0,
"udpg_c":-1.0,
"udpsq_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02940",
"subsystem":"Sulfolipid biosynthesis",
"notes":{
"original_bigg_ids":[
"UDPSQS"
]
},
"annotation":{
"bigg.reaction":[
"SQD1"
],
"biocyc":[
"META:RXN-1223"
],
"ec-code":[
"3.13.1.1"
],
"kegg.reaction":[
"R05775"
],
"metanetx.reaction":[
"MNXR143399"
],
"rhea":[
"13200",
"13197",
"13199",
"13198"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04027"
]
}
},
{
"id":"ACKr",
"name":"Acetate kinase",
"metabolites":{
"ac_c":-1.0,
"actp_c":1.0,
"adp_c":1.0,
"atp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10540",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"ACKr"
]
},
"annotation":{
"bigg.reaction":[
"ACKr"
],
"biocyc":[
"META:ACETATEKIN-RXN"
],
"ec-code":[
"2.7.2.15",
"2.7.2.1"
],
"kegg.reaction":[
"R00315"
],
"metanetx.reaction":[
"MNXR95269"
],
"rhea":[
"11354",
"11355",
"11353",
"11352"
],
"sabiork":[
"71"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00225"
]
}
},
{
"id":"UDCPDPS",
"name":"Undecaprenyl diphosphate synthase",
"metabolites":{
"frdp_c":-1.0,
"ipdp_c":-8.0,
"ppi_c":8.0,
"udcpdp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01345",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"UDCPDPS"
]
},
"annotation":{
"bigg.reaction":[
"UDCPDPS"
],
"biocyc":[
"META:RXN-9138"
],
"ec-code":[
"2.5.1",
"2.5.1.M1",
"2.5.1.31"
],
"metanetx.reaction":[
"MNXR105043"
],
"sabiork":[
"12133"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GK1",
"name":"Guanylate kinase (GMP:ATP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"gdp_c":1.0,
"gmp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06100",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"GK1"
]
},
"annotation":{
"bigg.reaction":[
"GK1"
],
"biocyc":[
"META:GUANYL-KIN-RXN"
],
"ec-code":[
"2.7.4.8"
],
"kegg.reaction":[
"R00332"
],
"metanetx.reaction":[
"MNXR100144"
],
"rhea":[
"20783",
"20782",
"20780",
"20781"
],
"sabiork":[
"77"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00239"
]
}
},
{
"id":"SHKK",
"name":"Shikimate kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"skm5p_c":1.0,
"skm_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04605",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"SHKK"
]
},
"annotation":{
"bigg.reaction":[
"SHKK"
],
"biocyc":[
"META:SHIKIMATE-KINASE-RXN"
],
"ec-code":[
"2.7.1.71"
],
"kegg.reaction":[
"R02412"
],
"metanetx.reaction":[
"MNXR104379"
],
"reactome.reaction":[
"R-MTU-964939"
],
"rhea":[
"13121",
"13122",
"13123",
"13124"
],
"sabiork":[
"2350"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01739"
]
}
},
{
"id":"OXADC",
"name":"Oxalate decarboxylase",
"metabolites":{
"co2_c":1.0,
"for_c":1.0,
"h_c":-1.0,
"oxa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12135",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"OXADC"
]
},
"annotation":{
"bigg.reaction":[
"OXADC"
],
"biocyc":[
"META:OXALATE-DECARBOXYLASE-RXN"
],
"ec-code":[
"4.1.1.2"
],
"kegg.reaction":[
"R00522"
],
"metanetx.reaction":[
"MNXR102233"
],
"rhea":[
"16512",
"16509",
"16510",
"16511"
],
"sabiork":[
"941"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00373"
]
}
},
{
"id":"G1PACT",
"name":"Glucosamine-1-phosphate N-acetyltransferase",
"metabolites":{
"accoa_c":-1.0,
"acgam1p_c":1.0,
"coa_c":1.0,
"gam1p_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01465",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"G1PACT"
]
},
"annotation":{
"bigg.reaction":[
"G1PACT"
],
"ec-code":[
"2.3.1.4",
"2.3.1.157"
],
"metanetx.reaction":[
"MNXR99841"
],
"sabiork":[
"4940"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03638"
]
}
},
{
"id":"3HAD60",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C6:0)",
"metabolites":{
"3hhexACP_c":-1.0,
"h2o_c":1.0,
"thex2eACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD60"
]
},
"annotation":{
"bigg.reaction":[
"3HAD60"
],
"ec-code":[
"2.3.1.85",
"4.2.1.58",
"2.3.1.86",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04954"
],
"metanetx.reaction":[
"MNXR94887"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05330"
]
}
},
{
"id":"PGI",
"name":"Glucose-6-phosphate isomerase",
"metabolites":{
"f6p_c":1.0,
"g6p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10295",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"PGI"
]
},
"annotation":{
"bigg.reaction":[
"PGI"
],
"biocyc":[
"META:PGLUCISOM-RXN"
],
"ec-code":[
"5.3.1.9"
],
"metanetx.reaction":[
"MNXR102535"
],
"sbo":"SBO:0000176"
}
},
{
"id":"KAS14",
"name":"Beta-ketoacyl-ACP synthase",
"metabolites":{
"ACP_c":1.0,
"acACP_c":-1.0,
"actACP_c":1.0,
"co2_c":1.0,
"h_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"KAS14"
]
},
"annotation":{
"bigg.reaction":[
"KAS14"
],
"biocyc":[
"META:3-OXOACYL-ACP-SYNTH-BASE-RXN"
],
"ec-code":[
"2.3.1.180",
"2.3.1.85",
"2.3.1.86",
"2.3.1.179",
"2.3.1.-",
"2.3.1.41"
],
"kegg.reaction":[
"R04355"
],
"metanetx.reaction":[
"MNXR100912"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05347"
]
}
},
{
"id":"OHPBAT",
"name":"O-Phospho-4-hydroxy-L-threonine:2-oxoglutarate aminotransferase",
"metabolites":{
"akg_c":1.0,
"glu__L_c":-1.0,
"ohpb_c":-1.0,
"phthr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10975",
"subsystem":"Cofactor biosynthesis: Vitamin B6",
"notes":{
"original_bigg_ids":[
"OHPBAT"
]
},
"annotation":{
"bigg.reaction":[
"OHPBAT"
],
"biocyc":[
"META:PSERTRANSAMPYR-RXN"
],
"ec-code":[
"2.6.1.52"
],
"kegg.reaction":[
"R05085"
],
"metanetx.reaction":[
"MNXR102169"
],
"rhea":[
"16576",
"16575",
"16574",
"16573"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03445"
]
}
},
{
"id":"PQH2tum",
"name":"Plastoquinine insertion into the thylakoid membrane",
"metabolites":{
"pqh2_c":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Thylakoid Membrane",
"notes":{
"original_bigg_ids":[
"PQH2tum"
]
},
"annotation":{
"bigg.reaction":[
"PQH2tum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"O2tu",
"name":"O2 transport (diffusion), lumen",
"metabolites":{
"o2_c":1.0,
"o2_u":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Thylakoid Membrane",
"notes":{
"original_bigg_ids":[
"O2tu"
]
},
"annotation":{
"bigg.reaction":[
"O2tu"
],
"biocyc":[
"META:TRANS-RXN0-474"
],
"metanetx.reaction":[
"MNXR102090"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09641",
"rxn05468",
"rxn09031",
"rxn09032",
"rxn09734"
]
}
},
{
"id":"O2tpp",
"name":"O2 transport via diffusion (periplasm)",
"metabolites":{
"o2_c":1.0,
"o2_p":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"O2tpp"
]
},
"annotation":{
"bigg.reaction":[
"O2tpp"
],
"biocyc":[
"META:TRANS-RXN0-474"
],
"metanetx.reaction":[
"MNXR102090"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09641",
"rxn05468",
"rxn09031",
"rxn09032",
"rxn09734"
]
}
},
{
"id":"H2Otex",
"name":"H2O transport via diffusion (extracellular to periplasm)",
"metabolites":{
"h2o_e":-1.0,
"h2o_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"H2Otex"
]
},
"annotation":{
"bigg.reaction":[
"H2Otex"
],
"biocyc":[
"META:TRANS-RXN-145",
"META:TRANS-RXN0-547"
],
"metanetx.reaction":[
"MNXR98641"
],
"reactome.reaction":[
"R-ATH-507868",
"R-CFA-432054",
"R-CFA-432010",
"R-RNO-507868",
"R-OSA-432065",
"R-GGA-432010",
"R-SPO-445714",
"R-PFA-445714",
"R-CFA-432065",
"R-GGA-432067",
"R-TGU-432054",
"R-TGU-445714",
"R-OSA-507868",
"R-DRE-507868",
"R-SPO-507868",
"R-BTA-432054",
"R-GGA-507870",
"R-OSA-432010",
"R-DME-432065",
"R-DRE-432067",
"R-PFA-507868",
"R-SSC-432054",
"R-HSA-432065",
"R-OSA-507870",
"R-HSA-432054",
"R-SSC-432065",
"R-CEL-507868",
"R-XTR-507868",
"R-ATH-507870",
"R-SCE-432065",
"R-BTA-507870",
"R-DME-432010",
"R-CFA-445714",
"R-DRE-445714",
"R-BTA-507868",
"R-GGA-507868",
"R-RNO-432054",
"R-RNO-432010",
"R-SSC-432067",
"R-CEL-445714",
"R-DDI-432065",
"R-ATH-432010",
"R-SCE-432054",
"R-MMU-432065",
"R-MMU-445714",
"R-GGA-432065",
"R-HSA-432067",
"R-SSC-507870",
"R-SCE-432067",
"R-RNO-507870",
"R-DME-432054",
"R-ATH-432067",
"R-BTA-445714",
"R-DRE-507870",
"R-DME-507868",
"R-DME-507870",
"R-DRE-432010",
"R-MMU-432010",
"R-HSA-445714",
"R-OSA-432054",
"R-RNO-432067",
"R-TGU-432010",
"R-TGU-507868",
"R-DDI-432054",
"R-PFA-507870",
"R-HSA-507870",
"R-XTR-432067",
"R-HSA-432010",
"R-SSC-507868",
"R-SCE-507870",
"R-CEL-507870",
"R-DDI-507868",
"R-DRE-432054",
"R-XTR-507870",
"R-DDI-432010",
"R-BTA-432065",
"R-CFA-432067",
"R-OSA-432067",
"R-ATH-432065",
"R-GGA-445714",
"R-SCE-507868",
"R-TGU-432065",
"R-MMU-432067",
"R-TGU-507870",
"R-CFA-507870",
"R-RNO-432065",
"R-MMU-432054",
"R-MMU-507868",
"R-SPO-507870",
"R-SCE-432010",
"R-MMU-507870",
"R-SSC-445714",
"R-HSA-507868",
"R-DME-432067",
"R-SSC-432010",
"R-TGU-432067",
"R-GGA-432054",
"R-BTA-432010",
"R-SCE-445714",
"R-DDI-507870",
"R-ATH-432054",
"R-DDI-432067",
"R-XTR-445714",
"R-BTA-432067",
"R-CFA-507868",
"R-RNO-445714"
],
"rhea":[
"29668",
"29669",
"29667",
"29670"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08687",
"rxn08686",
"rxn09745",
"rxn09838",
"rxn09874",
"rxn09812",
"rxn09643",
"rxn05319"
]
}
},
{
"id":"SK_for_c",
"name":"Sink for(c)",
"metabolites":{
"for_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_for_c"
]
},
"annotation":{
"bigg.reaction":[
"SK_for_c"
],
"biocyc":[
"META:TRANS-RXN-1"
],
"metanetx.reaction":[
"MNXR99620"
],
"reactome.reaction":[
"R-HSA-6803255"
],
"rhea":[
"29681",
"29680",
"29682",
"29679"
],
"sabiork":[
"12483"
],
"sbo":"SBO:0000632",
"seed.reaction":[
"rxn09754",
"rxn08525",
"rxn09682",
"rxn08526"
]
}
},
{
"id":"EX_mg2_e",
"name":"Mg exchange",
"metabolites":{
"mg2_e":-1.0
},
"lower_bound":-0.03,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_mg2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_mg2_e"
],
"biocyc":[
"META:TRANS-RXN-141"
],
"metanetx.reaction":[
"MNXR101507"
],
"reactome.reaction":[
"R-MMU-442661",
"R-OSA-5336466",
"R-BTA-5336453",
"R-SSC-442661",
"R-MMU-5336453",
"R-HSA-5339528",
"R-MMU-5336466",
"R-TGU-5339538",
"R-SCE-5336466",
"R-SCE-5339538",
"R-XTR-5336466",
"R-GGA-442661",
"R-ATH-5336453",
"R-BTA-5336466",
"R-RNO-5339538",
"R-SSC-5339538",
"R-SPO-5339528",
"R-DME-5339528",
"R-GGA-5339538",
"R-CEL-5336453",
"R-TGU-5336453",
"R-OSA-5336453",
"R-SCE-5339528",
"R-ATH-5336466",
"R-CFA-5336453",
"R-CEL-5339528",
"R-SPO-5339538",
"R-SSC-5336466",
"R-XTR-5339528",
"R-SSC-5339528",
"R-DRE-5339528",
"R-BTA-5339528",
"R-CFA-442661",
"R-CFA-5339538",
"R-DME-442661",
"R-DME-5339538",
"R-DRE-5339538",
"R-MMU-5339538",
"R-RNO-442661",
"R-RNO-5336453",
"R-DDI-5336466",
"R-RNO-5339528",
"R-HSA-442661",
"R-HSA-5336453",
"R-TGU-5336466",
"R-DRE-5336466",
"R-BTA-442661",
"R-DRE-5336453",
"R-HSA-5339538",
"R-HSA-5336454",
"R-TGU-5339528",
"R-GGA-5339528",
"R-XTR-5339538",
"R-MMU-5339528",
"R-DME-5336453",
"R-RNO-5336466",
"R-CFA-5336466",
"R-CEL-442661",
"R-SPO-5336466",
"R-GGA-5336453",
"R-BTA-5339538",
"R-TGU-442661",
"R-HSA-5336466",
"R-XTR-442661",
"R-CEL-5339538",
"R-MMU-5336430",
"R-DRE-442661",
"R-GGA-5336466",
"R-CFA-5339528"
],
"rhea":[
"29827",
"29828",
"29829",
"29830"
],
"sabiork":[
"12062"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn05616",
"rxn08922",
"rxn08923"
]
}
},
{
"id":"3HAD80",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C8:0)",
"metabolites":{
"3hoctACP_c":-1.0,
"h2o_c":1.0,
"toct2eACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD80"
]
},
"annotation":{
"bigg.reaction":[
"3HAD80"
],
"biocyc":[
"META:4.2.1.59-RXN"
],
"ec-code":[
"2.3.1.85",
"4.2.1.58",
"2.3.1.86",
"4.2.1.61",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04537"
],
"metanetx.reaction":[
"MNXR94888"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05334"
]
}
},
{
"id":"3OAR160",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C16:0)",
"metabolites":{
"3hpalmACP_c":1.0,
"3opalmACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR160"
]
},
"annotation":{
"bigg.reaction":[
"3OAR160"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04543"
],
"metanetx.reaction":[
"MNXR94946"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05336"
]
}
},
{
"id":"NMNS",
"name":"NMN synthetase",
"metabolites":{
"h_c":-1.0,
"ncam_c":-1.0,
"nmn_c":1.0,
"ppi_c":1.0,
"prpp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01045",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NMNS"
]
},
"annotation":{
"bigg.reaction":[
"NMNS"
],
"biocyc":[
"META:2.4.2.12-RXN"
],
"ec-code":[
"2.4.2.12"
],
"kegg.reaction":[
"R01271"
],
"metanetx.reaction":[
"MNXR101911"
],
"rhea":[
"16151",
"16150",
"16149",
"16152"
],
"sabiork":[
"1488"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00941"
]
}
},
{
"id":"PPK",
"name":"Polyphosphate kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"pi_c":-1.0,
"ppi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08000",
"subsystem":"Inorganic Ion Transport and Metabolism",
"notes":{
"original_bigg_ids":[
"PPKr"
]
},
"annotation":{
"bigg.reaction":[
"PPK"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GALUi",
"name":"UTP-glucose-1-phosphate uridylyltransferase (irreversible)",
"metabolites":{
"g1p_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0,
"udpg_c":1.0,
"utp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10005",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"GALUi"
]
},
"annotation":{
"bigg.reaction":[
"GALUi"
],
"biocyc":[
"META:GLUC1PURIDYLTRANS-RXN"
],
"ec-code":[
"2.7.7.9",
"2.7.7.64"
],
"kegg.reaction":[
"R00289"
],
"metanetx.reaction":[
"MNXR143121"
],
"reactome.reaction":[
"R-HSA-70286",
"R-DME-70286",
"R-BTA-70286",
"R-DDI-70286",
"R-CEL-70286",
"R-OSA-70286",
"R-RNO-70286",
"R-SCE-70286",
"R-SPO-70286",
"R-ATH-70286",
"R-DRE-70286",
"R-SSC-70286",
"R-XTR-70286",
"R-CFA-70286",
"R-MMU-70286",
"R-GGA-70286",
"R-TGU-70286"
],
"rhea":[
"19889",
"19892",
"19890",
"19891"
],
"sabiork":[
"8973",
"68"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00213"
]
}
},
{
"id":"PHYTES2_1",
"name":"Prephytoene diphosphate geranylgeranyl-diphosphategeranylgeranyltransferase",
"metabolites":{
"phyto_c":1.0,
"ppi_c":1.0,
"prephytedp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10060",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"PHYTES2"
]
},
"annotation":{
"bigg.reaction":[
"PHYTES2_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"IGPDH",
"name":"Imidazoleglycerol-phosphate dehydratase",
"metabolites":{
"eig3p_c":-1.0,
"h2o_c":1.0,
"imacp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00635",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"IGPDH"
]
},
"annotation":{
"bigg.reaction":[
"IGPDH"
],
"biocyc":[
"META:IMIDPHOSDEHYD-RXN"
],
"ec-code":[
"4.2.1.19"
],
"kegg.reaction":[
"R03457"
],
"metanetx.reaction":[
"MNXR100813"
],
"rhea":[
"11041",
"11043",
"11040",
"11042"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02473"
]
}
},
{
"id":"OMPDC",
"name":"Orotidine-5'-phosphate decarboxylase",
"metabolites":{
"co2_c":1.0,
"h_c":-1.0,
"orot5p_c":-1.0,
"ump_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13055",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"OMPDC"
]
},
"annotation":{
"bigg.reaction":[
"OMPDC"
],
"biocyc":[
"META:OROTPDECARB-RXN"
],
"ec-code":[
"4.1.1.23"
],
"kegg.reaction":[
"R00965"
],
"metanetx.reaction":[
"MNXR102190"
],
"reactome.reaction":[
"R-TGU-73564",
"R-GGA-419461",
"R-SSC-73564",
"R-HSA-73564",
"R-SPO-73564",
"R-DRE-73564",
"R-DDI-73564",
"R-GGA-73564",
"R-CFA-73564",
"R-PFA-73564",
"R-ATH-73564",
"R-OSA-73564",
"R-BTA-73564",
"R-RNO-73564",
"R-MMU-73564",
"R-SCE-73564",
"R-CEL-73564",
"R-DME-73564",
"R-XTR-73564"
],
"rhea":[
"11597",
"11599",
"11596",
"11598"
],
"sabiork":[
"463"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00710"
]
}
},
{
"id":"DCTPD",
"name":"DCTP deaminase",
"metabolites":{
"dctp_c":-1.0,
"dutp_c":1.0,
"h2o_c":-1.0,
"h_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03695",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"DCTPD"
]
},
"annotation":{
"bigg.reaction":[
"DCTPD"
],
"biocyc":[
"META:DCTP-DEAM-RXN"
],
"ec-code":[
"3.5.4.13"
],
"kegg.reaction":[
"R02325"
],
"metanetx.reaction":[
"MNXR97201"
],
"rhea":[
"22683",
"22681",
"22682",
"22680"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01672"
]
}
},
{
"id":"GLUSfx",
"name":"Glutamate synthase (ferredoxin)",
"metabolites":{
"akg_c":-1.0,
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"gln__L_c":-1.0,
"glu__L_c":2.0,
"h_c":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04585",
"subsystem":"Amino acid metabolism: Alanine, Aspartate and Glutamate metabolism",
"notes":{
"original_bigg_ids":[
"GLUSfx"
]
},
"annotation":{
"bigg.reaction":[
"GLUSfx"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NADS2",
"name":"Nicotinate-mononucleotide adenylyltransferase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"dnad_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00535",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NADS2"
]
},
"annotation":{
"bigg.reaction":[
"NADS2"
],
"biocyc":[
"META:NAD-SYNTH-GLN-RXN"
],
"ec-code":[
"6.3.5.1"
],
"kegg.reaction":[
"R00257"
],
"metanetx.reaction":[
"MNXR97678"
],
"reactome.reaction":[
"R-SPO-197271",
"R-HSA-197271",
"R-TGU-197271",
"R-DDI-197271",
"R-GGA-197271",
"R-DME-197271",
"R-DRE-197271",
"R-CEL-197271",
"R-RNO-197271",
"R-OSA-197271",
"R-CFA-197271",
"R-PFA-197271",
"R-ATH-197271",
"R-MMU-197271",
"R-SCE-197271",
"R-SSC-197271",
"R-BTA-197271",
"R-XTR-197271"
],
"rhea":[
"24385",
"24384",
"24387",
"24386"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00190"
]
}
},
{
"id":"GLUTRR",
"name":"Glutamyl-tRNA reductase",
"metabolites":{
"glu1sa_c":1.0,
"glutrna_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"trnaglu_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02560",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"GLUTRR"
]
},
"annotation":{
"bigg.reaction":[
"GLUTRR"
],
"ec-code":[
"1.2.1.70"
],
"kegg.reaction":[
"R04109"
],
"metanetx.reaction":[
"MNXR100294"
],
"sabiork":[
"9145"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06591"
]
}
},
{
"id":"G1PTT",
"name":"Glucose-1-phosphate thymidylyltransferase",
"metabolites":{
"dtdpglu_c":1.0,
"dttp_c":-1.0,
"g1p_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10650",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"G1PTT"
]
},
"annotation":{
"bigg.reaction":[
"G1PTT"
],
"biocyc":[
"META:DTDPGLUCOSEPP-RXN"
],
"ec-code":[
"2.7.7.24"
],
"kegg.reaction":[
"R02328"
],
"metanetx.reaction":[
"MNXR99846"
],
"rhea":[
"15226",
"15227",
"15225",
"15228"
],
"sabiork":[
"2281"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01675"
]
}
},
{
"id":"UAMAGS",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glu__D_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"uama_c":-1.0,
"uamag_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08500",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UAMAGS"
]
},
"annotation":{
"bigg.reaction":[
"UAMAGS"
],
"biocyc":[
"META:UDP-NACMURALA-GLU-LIG-RXN"
],
"ec-code":[
"6.3.2.9"
],
"kegg.reaction":[
"R02783"
],
"metanetx.reaction":[
"MNXR105038"
],
"rhea":[
"16430",
"16429",
"16431",
"16432"
],
"sabiork":[
"2659"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02008",
"rxn11252"
]
}
},
{
"id":"SPS",
"name":"Sucrose phosphate synthase",
"metabolites":{
"f6p_c":-1.0,
"h_c":1.0,
"suc6p_c":1.0,
"udp_c":1.0,
"udpg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04180",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"SPS"
]
},
"annotation":{
"bigg.reaction":[
"SPS"
],
"biocyc":[
"META:SUCROSE-PHOSPHATE-SYNTHASE-RXN"
],
"ec-code":[
"2.4.1.14"
],
"metanetx.reaction":[
"MNXR143398"
],
"rhea":[
"22174",
"22172",
"22173",
"22175"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ADCL",
"name":"4-aminobenzoate synthase",
"metabolites":{
"4abz_c":1.0,
"4adcho_c":-1.0,
"h_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06825",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"ADCL"
]
},
"annotation":{
"bigg.reaction":[
"ADCL"
],
"biocyc":[
"META:ADCLY-RXN"
],
"ec-code":[
"4.1.3.38"
],
"kegg.reaction":[
"R05553"
],
"metanetx.reaction":[
"MNXR95436"
],
"rhea":[
"16201",
"16203",
"16204",
"16202"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03841"
]
}
},
{
"id":"CYTK1",
"name":"Cytidylate kinase (CMP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cdp_c":1.0,
"cmp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05900",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"CYTK1"
]
},
"annotation":{
"bigg.reaction":[
"CYTK1"
],
"biocyc":[
"META:RXN-11832"
],
"ec-code":[
"2.7.4.25",
"2.7.4.14"
],
"kegg.reaction":[
"R00512"
],
"metanetx.reaction":[
"MNXR97047"
],
"rhea":[
"11603",
"11601",
"11602",
"11600"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00364"
]
}
},
{
"id":"DAPDC",
"name":"Diaminopimelate decarboxylase",
"metabolites":{
"26dap__M_c":-1.0,
"co2_c":1.0,
"h_c":-1.0,
"lys__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01335",
"subsystem":"Amino acid metabolism: Lysine biosynthesis",
"notes":{
"original_bigg_ids":[
"DAPDC"
]
},
"annotation":{
"bigg.reaction":[
"DAPDC"
],
"biocyc":[
"META:DIAMINOPIMDECARB-RXN"
],
"ec-code":[
"4.1.1.20"
],
"kegg.reaction":[
"R00451"
],
"metanetx.reaction":[
"MNXR97141"
],
"rhea":[
"15101",
"15104",
"15102",
"15103"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00313"
]
}
},
{
"id":"PSIum",
"name":"Photosystem I",
"metabolites":{
"fdxox_c":-0.99,
"fdxrd_c":0.99,
"o2_c":-0.01,
"o2s_c":0.01,
"p700_exc_um":-1.0,
"p700_um":1.0,
"pcox_u":1.0,
"pcrd_u":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02075 and SYNPCC7942_RS02720 and SYNPCC7942_RS03350 and SYNPCC7942_RS04735 and SYNPCC7942_RS05140 and SYNPCC7942_RS06400 and SYNPCC7942_RS06405 and SYNPCC7942_RS06760 and SYNPCC7942_RS09705 and SYNPCC7942_RS10390 and SYNPCC7942_RS10395 and SYNPCC7942_RS11800 and SYNPCC7942_RS11900 and SYNPCC7942_RS11905 and SYNPCC7942_RS12755",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PSIum"
]
},
"annotation":{
"bigg.reaction":[
"PSIum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"R05219",
"name":"Precorrin 5 <=> Precorrin 6X",
"metabolites":{
"ac_c":1.0,
"ahcys_c":1.0,
"amet_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pre5_c":-1.0,
"pre6a_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00965",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PC6AS"
]
},
"annotation":{
"bigg.reaction":[
"R05219"
],
"biocyc":[
"META:R322-RXN"
],
"ec-code":[
"2.1.1.152"
],
"kegg.reaction":[
"R05219"
],
"metanetx.reaction":[
"MNXR103404"
],
"rhea":[
"18262",
"18261",
"18263",
"18264"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03534"
]
}
},
{
"id":"Cobalt2abcppI",
"name":"Cobalt II transport via ABC system periplasm I",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cobalt2_c":1.0,
"cobalt2_p":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11895 and SYNPCC7942_RS02850 and SYNPCC7942_RS08360",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"Cobalt2abcppI"
]
},
"annotation":{
"bigg.reaction":[
"Cobalt2abcppI"
],
"metanetx.reaction":[
"MNXR96862"
],
"rhea":[
"32779#1",
"32780#1",
"32781#1",
"32782#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05166"
]
}
},
{
"id":"PFK_3",
"name":"Phosphofructokinase (s7p)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"s17bp_c":1.0,
"s7p_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03035",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"PFK_3"
]
},
"annotation":{
"bigg.reaction":[
"PFK_3"
],
"biocyc":[
"META:RXN0-6541"
],
"ec-code":[
"2.7.1.11",
"2.7.1"
],
"kegg.reaction":[
"R01843"
],
"metanetx.reaction":[
"MNXR102510"
],
"rhea":[
"31445",
"31446",
"31444",
"31443"
],
"sabiork":[
"41"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01343"
]
}
},
{
"id":"THRS",
"name":"Threonine synthase",
"metabolites":{
"h2o_c":-1.0,
"phom_c":-1.0,
"pi_c":1.0,
"thr__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13305 or SYNPCC7942_RS09055",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"THRS"
]
},
"annotation":{
"bigg.reaction":[
"THRS"
],
"biocyc":[
"META:THRESYN-RXN"
],
"ec-code":[
"4.2.3.1"
],
"kegg.reaction":[
"R01466"
],
"metanetx.reaction":[
"MNXR104846"
],
"rhea":[
"10842",
"10841",
"10840",
"10843"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01069"
]
}
},
{
"id":"NAMNPP",
"name":"Nicotinic acid mononucleotide pyrophosphorylase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"nac_c":-1.0,
"nicrnt_c":1.0,
"pi_c":1.0,
"ppi_c":1.0,
"prpp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01045",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NAMNPP"
]
},
"annotation":{
"bigg.reaction":[
"NAMNPP"
],
"biocyc":[
"META:NICOTINATEPRIBOSYLTRANS-RXN"
],
"ec-code":[
"6.3.4.21"
],
"kegg.reaction":[
"R01724"
],
"metanetx.reaction":[
"MNXR101909"
],
"rhea":[
"36164",
"36163",
"36166",
"36165"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08981"
]
}
},
{
"id":"FOLD3",
"name":"Dihydropteroate synthase",
"metabolites":{
"2ahhmd_c":-1.0,
"4abz_c":-1.0,
"dhpt_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11705",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"FOLD3"
]
},
"annotation":{
"bigg.reaction":[
"FOLD3"
],
"ec-code":[
"2.5.1.15"
],
"metanetx.reaction":[
"MNXR143108"
],
"sabiork":[
"2910"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02201"
]
}
},
{
"id":"P5CR",
"name":"Pyrroline-5-carboxylate reductase",
"metabolites":{
"1pyr5c_c":-1.0,
"h_c":-2.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pro__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10440",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"P5CR"
]
},
"annotation":{
"bigg.reaction":[
"P5CR"
],
"ec-code":[
"1.5.1.2"
],
"kegg.reaction":[
"R01251"
],
"metanetx.reaction":[
"MNXR102302"
],
"reactome.reaction":[
"R-DDI-6783955",
"R-DRE-6783955",
"R-TGU-6783955",
"R-PFA-6783955",
"R-CEL-6783955",
"R-MMU-6783955",
"R-RNO-6783955",
"R-HSA-6783955",
"R-SCE-6783955",
"R-ATH-6783955",
"R-SPO-6783955",
"R-OSA-6783955",
"R-CFA-6783955",
"R-DME-6783955",
"R-GGA-6783955",
"R-BTA-6783955"
],
"rhea":[
"14111",
"14112",
"14109",
"14110"
],
"sabiork":[
"1470"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00931"
]
}
},
{
"id":"MEHLER_1",
"name":"Mehler reaction",
"metabolites":{
"h2o_c":2.0,
"h_c":-2.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09190 and SYNPCC7942_RS09195",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"MEHLER"
]
},
"annotation":{
"bigg.reaction":[
"MEHLER_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ICHORS",
"name":"Isochorismate synthase",
"metabolites":{
"chor_c":-1.0,
"ichor_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11120",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"ICHORS"
]
},
"annotation":{
"bigg.reaction":[
"ICHORS"
],
"biocyc":[
"META:ISOCHORSYN-RXN"
],
"ec-code":[
"5.4.4.2"
],
"kegg.reaction":[
"R01717"
],
"metanetx.reaction":[
"MNXR100784"
],
"rhea":[
"18986",
"18985",
"18988",
"18987"
],
"sabiork":[
"1829"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01258"
]
}
},
{
"id":"3OAS140",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C14:0)",
"metabolites":{
"3omrsACP_c":1.0,
"ACP_c":1.0,
"co2_c":1.0,
"ddcaACP_c":-1.0,
"h_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS140"
]
},
"annotation":{
"bigg.reaction":[
"3OAS140"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94957"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PPK2",
"name":"Polyphosphate kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"ppi_c":-1.0,
"pppi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08000",
"subsystem":"Inorganic Ion Transport and Metabolism",
"notes":{
"original_bigg_ids":[
"PPK2r"
]
},
"annotation":{
"bigg.reaction":[
"PPK2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"IPDPS_syn",
"name":"1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (ipdp)",
"metabolites":{
"h2mb4p_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"ipdp_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00360",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"IPDPS"
]
},
"annotation":{
"bigg.reaction":[
"IPDPS_syn"
],
"ec-code":[
"1.17.1.2"
],
"metanetx.reaction":[
"MNXR100810"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04113"
]
}
},
{
"id":"GLYDHDA",
"name":"Gylcine dehydrogenase (deamidating)",
"metabolites":{
"glx_c":1.0,
"gly_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"nh4_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08945",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"GLYDHDA"
]
},
"annotation":{
"bigg.reaction":[
"GLYDHDA"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SBP",
"name":"Sedoheptulose-bisphosphatase",
"metabolites":{
"h2o_c":-1.0,
"pi_c":1.0,
"s17bp_c":-1.0,
"s7p_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02565",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"SBP"
]
},
"annotation":{
"bigg.reaction":[
"SBP"
],
"biocyc":[
"META:SEDOHEPTULOSE-BISPHOSPHATASE-RXN"
],
"ec-code":[
"3.1.3.11",
"3.1.3.37"
],
"kegg.reaction":[
"R01845"
],
"metanetx.reaction":[
"MNXR104279"
],
"rhea":[
"17464",
"17463",
"17461",
"17462"
],
"sabiork":[
"1923"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01345"
]
}
},
{
"id":"H4THDPS",
"name":"4-hydroxy-tetrahydrodipicolinate synthase",
"metabolites":{
"4hthdp_c":1.0,
"aspsa_c":-1.0,
"h2o_c":1.0,
"h_c":1.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09370",
"subsystem":"Amino acid metabolism: Lysine biosynthesis",
"notes":{
"original_bigg_ids":[
"H4THDPS"
]
},
"annotation":{
"bigg.reaction":[
"H4THDPS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR60y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C6:0)",
"metabolites":{
"h_c":-1.0,
"hexACP_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"thex2eACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR60y"
]
},
"annotation":{
"bigg.reaction":[
"EAR60y"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR97866"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ZNabcpp",
"name":"Zinc (Zn+2) transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"zn2_c":1.0,
"zn2_p":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(SYNPCC7942_RS06730 and SYNPCC7942_RS06735 and SYNPCC7942_RS06740) or (SYNPCC7942_RS13075 and SYNPCC7942_RS13080 and SYNPCC7942_RS13085)",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"ZNabcpp"
]
},
"annotation":{
"bigg.reaction":[
"ZNabcpp"
],
"biocyc":[
"META:ABC-63-RXN"
],
"ec-code":[
"3.6.3.5"
],
"metanetx.reaction":[
"MNXR105281"
],
"rhea":[
"29796",
"29798",
"29797",
"29795"
],
"sabiork":[
"13430#2"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05150",
"rxn09392"
]
}
},
{
"id":"UAPGR",
"name":"UDP-N-acetylenolpyruvoylglucosamine reductase",
"metabolites":{
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"uaccg_c":-1.0,
"uamr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08855",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UAPGR"
]
},
"annotation":{
"bigg.reaction":[
"UAPGR"
],
"biocyc":[
"META:UDPNACETYLMURAMATEDEHYDROG-RXN"
],
"ec-code":[
"1.3.1.98"
],
"kegg.reaction":[
"R03192"
],
"metanetx.reaction":[
"MNXR141027"
],
"rhea":[
"12251",
"12250",
"12248",
"12249"
],
"sabiork":[
"3021"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02285"
]
}
},
{
"id":"DHAD1",
"name":"Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)",
"metabolites":{
"23dhmb_c":-1.0,
"3mob_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03210",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"DHAD1"
]
},
"annotation":{
"bigg.reaction":[
"DHAD1"
],
"biocyc":[
"META:DIHYDROXYISOVALDEHYDRAT-RXN"
],
"ec-code":[
"4.2.1.9"
],
"kegg.reaction":[
"R04441"
],
"metanetx.reaction":[
"MNXR97358"
],
"rhea":[
"24810",
"24811",
"24809",
"24812"
],
"sbo":"SBO:0000176"
}
},
{
"id":"IPPS",
"name":"2-isopropylmalate synthase",
"metabolites":{
"3c3hmp_c":1.0,
"3mob_c":-1.0,
"accoa_c":-1.0,
"coa_c":1.0,
"h2o_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02185",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"IPPS"
]
},
"annotation":{
"bigg.reaction":[
"IPPS"
],
"biocyc":[
"META:2-ISOPROPYLMALATESYN-RXN"
],
"ec-code":[
"2.3.3.13"
],
"kegg.reaction":[
"R01213"
],
"metanetx.reaction":[
"MNXR100879"
],
"rhea":[
"21527",
"21525",
"21524",
"21526"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00902"
]
}
},
{
"id":"ANS",
"name":"Anthranilate synthase",
"metabolites":{
"anth_c":1.0,
"chor_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02040 and SYNPCC7942_RS05145",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"ANS"
]
},
"annotation":{
"bigg.reaction":[
"ANS"
],
"biocyc":[
"META:ANTHRANSYN-RXN"
],
"ec-code":[
"4.1.3.27"
],
"kegg.reaction":[
"R00986"
],
"metanetx.reaction":[
"MNXR95843"
],
"rhea":[
"21734",
"21733",
"21735",
"21732"
],
"sabiork":[
"1280"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00727"
]
}
},
{
"id":"SUCBZL",
"name":"O-succinylbenzoate-CoA ligase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"ppi_c":1.0,
"sbzcoa_c":1.0,
"sucbz_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05250",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"SUCBZL"
]
},
"annotation":{
"bigg.reaction":[
"SUCBZL"
],
"biocyc":[
"META:O-SUCCINYLBENZOATE-COA-LIG-RXN"
],
"ec-code":[
"6.2.1.26"
],
"kegg.reaction":[
"R04030"
],
"metanetx.reaction":[
"MNXR104612"
],
"rhea":[
"17012",
"17011",
"17009",
"17010"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02831"
]
}
},
{
"id":"ADSL1r",
"name":"Adenylsuccinate lyase",
"metabolites":{
"amp_c":1.0,
"dcamp_c":-1.0,
"fum_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01605",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"ADSL1r"
]
},
"annotation":{
"bigg.reaction":[
"ADSL1r"
],
"biocyc":[
"META:AMPSYN-RXN"
],
"ec-code":[
"4.3.2.2"
],
"kegg.reaction":[
"R01083"
],
"metanetx.reaction":[
"MNXR95493"
],
"reactome.reaction":[
"R-GGA-421197",
"R-CEL-73828",
"R-DME-73828",
"R-PFA-73828",
"R-OSA-73828",
"R-RNO-73828",
"R-TGU-73828",
"R-ATH-73828",
"R-XTR-73828",
"R-MMU-73828",
"R-BTA-73828",
"R-SCE-73828",
"R-DRE-73828",
"R-GGA-73828",
"R-HSA-73828",
"R-SPO-73828",
"R-SSC-73828",
"R-DDI-73828"
],
"rhea":[
"16854",
"16853",
"16856",
"16855"
],
"sabiork":[
"306"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00800"
]
}
},
{
"id":"NNATr",
"name":"Nicotinate-nucleotide adenylyltransferase",
"metabolites":{
"atp_c":-1.0,
"dnad_c":1.0,
"h_c":-1.0,
"nicrnt_c":-1.0,
"ppi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01040 or SYNPCC7942_RS00540",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NNATr"
]
},
"annotation":{
"bigg.reaction":[
"NNATr"
],
"biocyc":[
"META:NICONUCADENYLYLTRAN-RXN"
],
"ec-code":[
"2.7.7.18",
"2.7.7.1"
],
"kegg.reaction":[
"R03005"
],
"metanetx.reaction":[
"MNXR101978"
],
"reactome.reaction":[
"R-MMU-197235",
"R-SCE-200474",
"R-BTA-200512",
"R-TGU-197235",
"R-TGU-200512",
"R-DDI-197235",
"R-HSA-200512",
"R-HSA-200474",
"R-ATH-197235",
"R-BTA-197235",
"R-HSA-197235",
"R-CEL-197235",
"R-ATH-200512",
"R-CFA-200512",
"R-RNO-197235",
"R-XTR-197235",
"R-DME-200512",
"R-XTR-200512",
"R-TGU-200474",
"R-MMU-200512",
"R-DDI-200512",
"R-SCE-200512",
"R-BTA-200474",
"R-RNO-200474",
"R-SCE-197235",
"R-OSA-200512",
"R-CFA-197235",
"R-ATH-200474",
"R-SSC-200512",
"R-SPO-197235",
"R-SPO-200474",
"R-GGA-200474",
"R-GGA-197235",
"R-SPO-200512",
"R-DME-200474",
"R-SSC-200474",
"R-OSA-197235",
"R-OSA-200474",
"R-RNO-200512",
"R-DRE-197235",
"R-GGA-200512",
"R-MMU-200474",
"R-CFA-200474",
"R-DRE-200474",
"R-DDI-200474",
"R-SSC-197235",
"R-DRE-200512"
],
"rhea":[
"22863",
"22861",
"22862",
"22860"
],
"sabiork":[
"2857"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02155"
]
}
},
{
"id":"PERD",
"name":"Erythronate 4-phosphate (4per) dehydrogenase",
"metabolites":{
"4per_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"ohpb_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08150",
"subsystem":"Cofactor biosynthesis: Vitamin B6",
"notes":{
"original_bigg_ids":[
"PERD"
]
},
"annotation":{
"bigg.reaction":[
"PERD"
],
"biocyc":[
"META:ERYTHRON4PDEHYDROG-RXN"
],
"ec-code":[
"1.1.1.290"
],
"kegg.reaction":[
"R04210"
],
"metanetx.reaction":[
"MNXR102495"
],
"rhea":[
"18831",
"18830",
"18832",
"18829"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02939"
]
}
},
{
"id":"PPBNGS",
"name":"Porphobilinogen synthase",
"metabolites":{
"5aop_c":-2.0,
"h2o_c":2.0,
"h_c":1.0,
"ppbng_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09105",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PPBNGS"
]
},
"annotation":{
"bigg.reaction":[
"PPBNGS"
],
"biocyc":[
"META:PORPHOBILSYNTH-RXN"
],
"ec-code":[
"4.2.1.24"
],
"kegg.reaction":[
"R00036"
],
"metanetx.reaction":[
"MNXR103095"
],
"reactome.reaction":[
"R-GGA-421472",
"R-DME-189439",
"R-SCE-189439",
"R-RNO-189439",
"R-HSA-189439",
"R-BTA-189439",
"R-MMU-189439",
"R-TGU-189439",
"R-OSA-189439",
"R-DDI-189439",
"R-ATH-189439",
"R-DRE-189439",
"R-PFA-189439",
"R-XTR-189439",
"R-GGA-189439",
"R-CFA-189439",
"R-SPO-189439"
],
"rhea":[
"24064",
"24066",
"24067",
"24065"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00029"
]
}
},
{
"id":"ADOCBLS",
"name":"Adenosylcobalamin 5'-phosphate synthase",
"metabolites":{
"adocbl_c":1.0,
"agdpcbi_c":-1.0,
"gmp_c":1.0,
"h_c":1.0,
"rdmbzi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02320",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"ADOCBLS"
]
},
"annotation":{
"bigg.reaction":[
"ADOCBLS"
],
"biocyc":[
"META:COBALAMINSYN-RXN"
],
"ec-code":[
"2.7.8.26"
],
"kegg.reaction":[
"R05223"
],
"metanetx.reaction":[
"MNXR95469"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03538"
]
}
},
{
"id":"LTHRK",
"name":"L threonine kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"thr__L_c":-1.0,
"thrp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06620 or SYNPCC7942_RS03080 or SYNPCC7942_RS04045 or SYNPCC7942_RS05695 or SYNPCC7942_RS05745",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"LTHRK"
]
},
"annotation":{
"bigg.reaction":[
"LTHRK"
],
"biocyc":[
"META:RXN-8626"
],
"ec-code":[
"2.7.1.177"
],
"kegg.reaction":[
"R06531"
],
"metanetx.reaction":[
"MNXR101251"
],
"rhea":[
"33709",
"33707",
"33708",
"33710"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn10609"
]
}
},
{
"id":"PPS",
"name":"Phosphoenolpyruvate synthase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":2.0,
"pep_c":1.0,
"pi_c":1.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04050",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"PPS"
]
},
"annotation":{
"bigg.reaction":[
"PPS"
],
"biocyc":[
"META:PEPSYNTH-RXN"
],
"ec-code":[
"2.7.9.2"
],
"kegg.reaction":[
"R00199"
],
"metanetx.reaction":[
"MNXR103140"
],
"rhea":[
"11364",
"11367",
"11366",
"11365"
],
"sabiork":[
"148"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00147"
]
}
},
{
"id":"APRAUR",
"name":"5-amino-6-(5-phosphoribosylamino)uracil reductase",
"metabolites":{
"5aprbu_c":1.0,
"5apru_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"APRAUR"
]
},
"annotation":{
"bigg.reaction":[
"APRAUR"
],
"biocyc":[
"META:RIBOFLAVINSYNREDUC-RXN"
],
"ec-code":[
"1.1.1.193"
],
"kegg.reaction":[
"R03458"
],
"metanetx.reaction":[
"MNXR95898"
],
"rhea":[
"17848",
"17846",
"17847",
"17845"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02474"
]
}
},
{
"id":"PDS2_1",
"name":"Phytofluene dehydrogenase",
"metabolites":{
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"phytfl_c":-1.0,
"zcarote_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10055",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"PDS2"
]
},
"annotation":{
"bigg.reaction":[
"PDS2_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"O2tex",
"name":"Oxygen transport via diffusion (extracellular to periplasm)",
"metabolites":{
"o2_e":-1.0,
"o2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"O2tex"
]
},
"annotation":{
"bigg.reaction":[
"O2tex"
],
"biocyc":[
"META:TRANS-RXN0-474"
],
"metanetx.reaction":[
"MNXR102090"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09641",
"rxn05468",
"rxn09031",
"rxn09032",
"rxn09734"
]
}
},
{
"id":"ALAALAr",
"name":"D-alanine-D-alanine ligase (reversible)",
"metabolites":{
"adp_c":1.0,
"ala__D_c":-2.0,
"alaala_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12070",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"ALAALAr"
]
},
"annotation":{
"bigg.reaction":[
"ALAALAr"
],
"biocyc":[
"META:DALADALALIG-RXN"
],
"ec-code":[
"6.3.2.4"
],
"kegg.reaction":[
"R01150"
],
"metanetx.reaction":[
"MNXR95678"
],
"rhea":[
"11226",
"11224",
"11225",
"11227"
],
"sabiork":[
"1391"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn13802",
"rxn00851"
]
}
},
{
"id":"ADCPS2",
"name":"Adenosylcobinamide-phosphate synthase",
"metabolites":{
"adcobhex_c":-1.0,
"adocbip_c":1.0,
"adp_c":1.0,
"applp_c":-1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07370",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"ADCPS2"
]
},
"annotation":{
"bigg.reaction":[
"ADCPS2"
],
"biocyc":[
"META:RXN-6261"
],
"ec-code":[
"6.3.1.10"
],
"kegg.reaction":[
"R06529"
],
"metanetx.reaction":[
"MNXR95439"
],
"rhea":[
"21896",
"21898",
"21899",
"21897"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04384"
]
}
},
{
"id":"GF6PTA",
"name":"Glutamine-fructose-6-phosphate transaminase",
"metabolites":{
"f6p_c":-1.0,
"gam6p_c":1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02715",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"GF6PTA"
]
},
"annotation":{
"bigg.reaction":[
"GF6PTA"
],
"biocyc":[
"META:L-GLN-FRUCT-6-P-AMINOTRANS-RXN"
],
"ec-code":[
"2.6.1.16"
],
"metanetx.reaction":[
"MNXR100107"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DNMPPA",
"name":"Dihydroneopterin monophosphate dephosphorylase",
"metabolites":{
"dhnpt_c":1.0,
"dhpmp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"DNMPPA"
]
},
"annotation":{
"bigg.reaction":[
"DNMPPA"
],
"biocyc":[
"META:DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN"
],
"ec-code":[
"3.6.1",
"3.6.1.-"
],
"kegg.reaction":[
"R04621"
],
"metanetx.reaction":[
"MNXR126238"
],
"rhea":[
"25308",
"25309",
"25306",
"25307"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03168"
]
}
},
{
"id":"PGMT",
"name":"Phosphoglucomutase",
"metabolites":{
"g1p_c":-1.0,
"g6p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00790",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"PGMT"
]
},
"annotation":{
"bigg.reaction":[
"PGMT"
],
"biocyc":[
"META:RXN-16999",
"META:PHOSPHOGLUCMUT-RXN"
],
"ec-code":[
"5.4.2.2",
"5.4.2.8",
"5.4.2.5"
],
"kegg.reaction":[
"R08639"
],
"metanetx.reaction":[
"MNXR102548"
],
"sabiork":[
"12817",
"7674"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00704"
]
}
},
{
"id":"G5SADs",
"name":"L-glutamate 5-semialdehyde dehydratase (spontaneous)",
"metabolites":{
"1pyr5c_c":1.0,
"glu5sa_c":-1.0,
"h2o_c":1.0,
"h_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"G5SADs"
]
},
"annotation":{
"bigg.reaction":[
"G5SADs"
],
"biocyc":[
"META:SPONTPRO-RXN"
],
"kegg.reaction":[
"R03314"
],
"metanetx.reaction":[
"MNXR99897"
],
"reactome.reaction":[
"R-HSA-70655",
"R-HSA-70667"
],
"rhea":[
"28237",
"28234",
"28235",
"28236"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11220",
"rxn02374"
]
}
},
{
"id":"GLCP2_1",
"name":"Glycogen phosphorylase",
"metabolites":{
"14glucan_c":-1.0,
"amylose_c":1.0,
"g1p_c":1.0,
"pi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01245",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"GLCP2"
]
},
"annotation":{
"bigg.reaction":[
"GLCP2_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"AGDI_1",
"name":"Agmatine deiminase",
"metabolites":{
"Ncbmpts_c":1.0,
"agm_c":-1.0,
"h2o_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12205",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"AGDI"
]
},
"annotation":{
"bigg.reaction":[
"AGDI_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"LPADSS2",
"name":"Lipid A disaccaride synthase (Synechococcus elongatus 7942)",
"metabolites":{
"h_c":1.0,
"lipidAds2_c":1.0,
"lipidX2_c":-1.0,
"u23ga2_c":-1.0,
"udp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04795",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"LPADSS2"
]
},
"annotation":{
"bigg.reaction":[
"LPADSS2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLYCK",
"name":"Glycerate kinase",
"metabolites":{
"3pg_c":1.0,
"adp_c":1.0,
"atp_c":-1.0,
"glyc__R_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05115",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"GLYCK"
]
},
"annotation":{
"bigg.reaction":[
"GLYCK"
],
"biocyc":[
"META:GLY3KIN-RXN"
],
"ec-code":[
"2.7.1.31"
],
"kegg.reaction":[
"R01514"
],
"metanetx.reaction":[
"MNXR100328"
],
"reactome.reaction":[
"R-MMU-6799495",
"R-TGU-6799495",
"R-DME-6799495",
"R-GGA-6799495",
"R-RNO-6799495",
"R-XTR-6799495",
"R-DRE-6799495",
"R-HSA-6799495",
"R-SSC-6799495",
"R-BTA-6799495",
"R-CEL-6799495",
"R-CFA-6799495"
],
"rhea":[
"23518",
"23519",
"23516",
"23517"
],
"sabiork":[
"428"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01102"
]
}
},
{
"id":"DPR",
"name":"2-dehydropantoate 2-reductase",
"metabolites":{
"2dhp_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pant__R_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07915",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"DPR"
]
},
"annotation":{
"bigg.reaction":[
"DPR"
],
"biocyc":[
"META:2-DEHYDROPANTOATE-REDUCT-RXN"
],
"ec-code":[
"1.1.1.169"
],
"kegg.reaction":[
"R02472"
],
"metanetx.reaction":[
"MNXR97779"
],
"rhea":[
"16233",
"16234",
"16235",
"16236"
],
"sabiork":[
"2405"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01790"
]
}
},
{
"id":"EX_ptrc_e",
"name":"Putrescine exchange",
"metabolites":{
"ptrc_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_ptrc_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_ptrc_e"
],
"metanetx.reaction":[
"MNXR103339"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn09216",
"rxn13393"
]
}
},
{
"id":"EAR120y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C12:0)",
"metabolites":{
"ddcaACP_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"tddec2eACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR120y"
]
},
"annotation":{
"bigg.reaction":[
"EAR120y"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR97848"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MAN1PT",
"name":"Mannose 1 phosphate guanylyltransferase",
"metabolites":{
"gdpmann_c":1.0,
"gtp_c":-1.0,
"h_c":-1.0,
"man1p_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08205",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"MAN1PT"
]
},
"annotation":{
"bigg.reaction":[
"MAN1PT"
],
"biocyc":[
"META:2.7.7.13-RXN"
],
"ec-code":[
"2.7.7.13"
],
"kegg.reaction":[
"R00885"
],
"metanetx.reaction":[
"MNXR101375"
],
"rhea":[
"15230",
"15232",
"15231",
"15229"
],
"sabiork":[
"8539",
"587"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00641"
]
}
},
{
"id":"NMNAT",
"name":"Nicotinamide-nucleotide adenylyltransferase",
"metabolites":{
"atp_c":-1.0,
"h_c":-1.0,
"nad_c":1.0,
"nmn_c":-1.0,
"ppi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01040 or SYNPCC7942_RS00540",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NMNAT"
]
},
"annotation":{
"bigg.reaction":[
"NMNAT"
],
"biocyc":[
"META:2.7.7.1-RXN"
],
"ec-code":[
"2.7.7.18",
"2.7.7.1"
],
"kegg.reaction":[
"R00137"
],
"metanetx.reaction":[
"MNXR95841"
],
"reactome.reaction":[
"R-ATH-8939959",
"R-DRE-8939959",
"R-TGU-8939959",
"R-RNO-8939959",
"R-HSA-8939959",
"R-XTR-8939959",
"R-CFA-8939959",
"R-GGA-8939959",
"R-DDI-8939959",
"R-MMU-8939959",
"R-SSC-8939959",
"R-SCE-8939959",
"R-OSA-8939959",
"R-BTA-8939959",
"R-SPO-8939959",
"R-CEL-8939959"
],
"rhea":[
"21361",
"21362",
"21360",
"21363"
],
"sabiork":[
"706"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00105"
]
}
},
{
"id":"TKT2",
"name":"Transketolase",
"metabolites":{
"e4p_c":-1.0,
"f6p_c":1.0,
"g3p_c":1.0,
"xu5p__D_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02735",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"TKT2"
]
},
"annotation":{
"bigg.reaction":[
"TKT2"
],
"biocyc":[
"META:2TRANSKETO-RXN"
],
"ec-code":[
"2.2.1.1"
],
"kegg.reaction":[
"R01830"
],
"metanetx.reaction":[
"MNXR104869"
],
"rhea":[
"27627",
"27628",
"27626",
"27629"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PSP_L",
"name":"Phosphoserine phosphatase (L-serine)",
"metabolites":{
"h2o_c":-1.0,
"pi_c":1.0,
"pser__L_c":-1.0,
"ser__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02470",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"PSP_L"
]
},
"annotation":{
"bigg.reaction":[
"PSP_L"
],
"biocyc":[
"META:RXN0-5114"
],
"ec-code":[
"3.1.3.3"
],
"kegg.reaction":[
"R00582"
],
"metanetx.reaction":[
"MNXR103260"
],
"reactome.reaction":[
"R-MMU-977324",
"R-CFA-977324",
"R-DME-977324",
"R-DRE-977324",
"R-SCE-977324",
"R-GGA-977324",
"R-BTA-977324",
"R-SSC-977324",
"R-HSA-977324",
"R-DDI-977324",
"R-SPO-977324",
"R-ATH-977324",
"R-XTR-977324",
"R-CEL-977324",
"R-OSA-977324",
"R-RNO-977324",
"R-TGU-977324"
],
"rhea":[
"21208",
"21211",
"21210",
"21209"
],
"sabiork":[
"10330",
"983"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00420"
]
}
},
{
"id":"HEX7",
"name":"Hexokinase (D-fructose:ATP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"f6p_c":1.0,
"fru_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00585",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"HEX7"
]
},
"annotation":{
"bigg.reaction":[
"HEX7"
],
"ec-code":[
"2.7.1.1",
"2.7.1.4"
],
"kegg.reaction":[
"R00867"
],
"metanetx.reaction":[
"MNXR100614"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PPNCL2",
"name":"Phosphopantothenate-cysteine ligase",
"metabolites":{
"4ppan_c":-1.0,
"4ppcys_c":1.0,
"cmp_c":1.0,
"ctp_c":-1.0,
"cys__L_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01490",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PPNCL2"
]
},
"annotation":{
"bigg.reaction":[
"PPNCL2"
],
"biocyc":[
"META:P-PANTOCYSLIG-RXN"
],
"ec-code":[
"6.3.2.5"
],
"kegg.reaction":[
"R04231"
],
"metanetx.reaction":[
"MNXR103119"
],
"rhea":[
"19399",
"19400",
"19397",
"19398"
],
"sabiork":[
"3942"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn09177"
]
}
},
{
"id":"CHORS",
"name":"Chorismate synthase",
"metabolites":{
"3psme_c":-1.0,
"chor_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01075",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"CHORS"
]
},
"annotation":{
"bigg.reaction":[
"CHORS"
],
"biocyc":[
"META:CHORISMATE-SYNTHASE-RXN"
],
"ec-code":[
"4.2.3.5"
],
"kegg.reaction":[
"R01714"
],
"metanetx.reaction":[
"MNXR96709"
],
"rhea":[
"21020",
"21023",
"21022",
"21021"
],
"sabiork":[
"1826"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01255"
]
}
},
{
"id":"CYTBD4cm",
"name":"Cytochrome bd oxidase (plastoquinone utilizing, non-proton translocating)",
"metabolites":{
"h2o_c":2.0,
"h_c":-4.0,
"h_p":4.0,
"o2_c":-1.0,
"pq_cm":2.0,
"pqh2_cm":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08975 and SYNPCC7942_RS08980",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"CYTBD4cm"
]
},
"annotation":{
"bigg.reaction":[
"CYTBD4cm"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PPNCL3",
"name":"4'-Phosphopantothenate:L-cysteine ligase",
"metabolites":{
"4ppan_c":-1.0,
"4ppcys_c":1.0,
"amp_c":1.0,
"atp_c":-1.0,
"cys__L_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01490",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PPNCL3"
]
},
"annotation":{
"bigg.reaction":[
"PPNCL3"
],
"biocyc":[
"META:RXN66-555"
],
"ec-code":[
"6.3.2",
"6.3.2.5"
],
"kegg.reaction":[
"R04230"
],
"metanetx.reaction":[
"MNXR103120"
],
"reactome.reaction":[
"R-CEL-196753",
"R-SSC-196753",
"R-CFA-196753",
"R-MMU-196753",
"R-SCE-196753",
"R-BTA-196753",
"R-TGU-196753",
"R-XTR-196753",
"R-PFA-196753",
"R-GGA-196753",
"R-ATH-196753",
"R-DME-196753",
"R-DRE-196753",
"R-HSA-196753",
"R-SPO-196753",
"R-OSA-196753",
"R-RNO-196753",
"R-DDI-196753"
],
"rhea":[
"25157",
"25156",
"25158",
"25159"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn12512"
]
}
},
{
"id":"CS",
"name":"Citrate synthase",
"metabolites":{
"accoa_c":-1.0,
"cit_c":1.0,
"coa_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"oaa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03140",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"CS"
]
},
"annotation":{
"bigg.reaction":[
"CS"
],
"biocyc":[
"META:CITSYN-RXN",
"META:RXN-14905"
],
"ec-code":[
"2.3.3.16",
"2.3.3.1",
"2.3.3.3"
],
"kegg.reaction":[
"R00351"
],
"metanetx.reaction":[
"MNXR96920"
],
"reactome.reaction":[
"R-GGA-373006",
"R-GGA-70975",
"R-CEL-70975",
"R-HSA-70975",
"R-DRE-70975",
"R-MMU-70975",
"R-ATH-70975",
"R-SPO-70975",
"R-OSA-70975",
"R-SCE-70975",
"R-SSC-70975",
"R-DDI-70975",
"R-RNO-70975",
"R-DME-70975",
"R-PFA-70975",
"R-XTR-70975",
"R-CFA-70975",
"R-BTA-70975"
],
"rhea":[
"16847",
"16846",
"16845",
"16848"
],
"sabiork":[
"267"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00256"
]
}
},
{
"id":"PPCDC",
"name":"Phosphopantothenoylcysteine decarboxylase",
"metabolites":{
"4ppcys_c":-1.0,
"co2_c":1.0,
"h_c":-1.0,
"pan4p_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01490",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PPCDC"
]
},
"annotation":{
"bigg.reaction":[
"PPCDC"
],
"biocyc":[
"META:P-PANTOCYSDECARB-RXN"
],
"ec-code":[
"4.1.1.36"
],
"kegg.reaction":[
"R03269"
],
"metanetx.reaction":[
"MNXR103098"
],
"reactome.reaction":[
"R-BTA-196840",
"R-HSA-196840",
"R-SSC-196840",
"R-CFA-196840",
"R-GGA-196840",
"R-XTR-196840",
"R-ATH-196840",
"R-SCE-196840",
"R-PFA-196840",
"R-MMU-196840",
"R-OSA-196840",
"R-DRE-196840",
"R-DDI-196840",
"R-DME-196840",
"R-TGU-196840",
"R-RNO-196840",
"R-CEL-196840"
],
"rhea":[
"16793",
"16796",
"16794",
"16795"
],
"sabiork":[
"3090"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02341"
]
}
},
{
"id":"LDH_D",
"name":"D-lactate dehydrogenase",
"metabolites":{
"h_c":1.0,
"lac__D_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pyr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06885",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"LDH_D"
]
},
"annotation":{
"bigg.reaction":[
"LDH_D"
],
"biocyc":[
"META:DLACTDEHYDROGNAD-RXN"
],
"ec-code":[
"1.1.1.28"
],
"kegg.reaction":[
"R00704"
],
"metanetx.reaction":[
"MNXR101037"
],
"rhea":[
"16370",
"16371",
"16372",
"16369"
],
"sabiork":[
"155"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00500"
]
}
},
{
"id":"HPYRRy",
"name":"Hydroxypyruvate reductase (NADPH)",
"metabolites":{
"glyc__R_c":1.0,
"h_c":-1.0,
"hpyr_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09420",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"GLYCOR_nadp"
]
},
"annotation":{
"bigg.reaction":[
"HPYRRy"
],
"biocyc":[
"META:RXN0-300"
],
"ec-code":[
"1.1.1.79",
"1.1.1",
"1.1.1.81"
],
"kegg.reaction":[
"R01392"
],
"metanetx.reaction":[
"MNXR100336"
],
"rhea":[
"18660",
"18659",
"18657",
"18658"
],
"sabiork":[
"427"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01013"
]
}
},
{
"id":"ADMDC",
"name":"Adenosylmethionine decarboxylase",
"metabolites":{
"amet_c":-1.0,
"ametam_c":1.0,
"co2_c":1.0,
"h_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10365 or SYNPCC7942_RS11425",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"ADMDC"
]
},
"annotation":{
"bigg.reaction":[
"ADMDC"
],
"biocyc":[
"META:SAMDECARB-RXN"
],
"ec-code":[
"4.1.1.50"
],
"kegg.reaction":[
"R00178"
],
"metanetx.reaction":[
"MNXR95455"
],
"rhea":[
"15982",
"15983",
"15984",
"15981"
],
"sabiork":[
"731"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00127"
]
}
},
{
"id":"PRE3BS",
"name":"Precorrin-3B synthase",
"metabolites":{
"h2o_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"o2_c":-1.0,
"pre3a_c":-1.0,
"pre3b_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09390",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PRE3BS"
]
},
"annotation":{
"bigg.reaction":[
"PRE3BS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PPPGO2_1",
"name":"Protoporphyrinogen oxidase (aerobic)",
"metabolites":{
"h2o2_c":3.0,
"o2_c":-3.0,
"ppp9_c":1.0,
"pppg9_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04385",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PPPGO2"
]
},
"annotation":{
"bigg.reaction":[
"PPPGO2_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"BIOMASS_DNA",
"name":"Biomass: DNA",
"metabolites":{
"bm_dna_c":1.0,
"datp_c":-0.7237,
"dctp_c":-0.89986,
"dgtp_c":-0.89986,
"dttp_c":-0.7237,
"ppi_c":3.24711
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00985 and SYNPCC7942_RS02900 and SYNPCC7942_RS11170 and SYNPCC7942_RS00005 and SYNPCC7942_RS02065 and SYNPCC7942_RS00475 and SYNPCC7942_RS04690",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_DNA"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_DNA"
],
"sbo":"SBO:0000629"
}
},
{
"id":"DMATT",
"name":"Dimethylallyltranstransferase",
"metabolites":{
"dmpp_c":-1.0,
"grdp_c":1.0,
"ipdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04025",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"DMATT"
]
},
"annotation":{
"bigg.reaction":[
"DMATT"
],
"biocyc":[
"META:GPPSYN-RXN"
],
"ec-code":[
"2.5.1.1"
],
"kegg.reaction":[
"R01658"
],
"metanetx.reaction":[
"MNXR97512"
],
"reactome.reaction":[
"R-HSA-191322",
"R-CFA-191322",
"R-CEL-191322",
"R-XTR-191322",
"R-GGA-191322",
"R-ATH-191322",
"R-DME-191322",
"R-SPO-191322",
"R-SSC-191322",
"R-DDI-191322",
"R-BTA-191322",
"R-MMU-191322",
"R-DRE-191322",
"R-PFA-191322",
"R-RNO-191322",
"R-TGU-191322",
"R-OSA-191322",
"R-SCE-191322"
],
"rhea":[
"22410",
"22409",
"22411",
"22408"
],
"sabiork":[
"1793"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01213"
]
}
},
{
"id":"DNAMTn2r",
"name":"DNA (cytosine-5-)-methyltransferase",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"dna5mtc_c":1.0,
"dna_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12505",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"DNAMTn2r"
]
},
"annotation":{
"bigg.reaction":[
"DNAMTn2r"
],
"ec-code":[
"2.1.1.37"
],
"kegg.reaction":[
"R00380"
],
"metanetx.reaction":[
"MNXR97627"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05821"
]
}
},
{
"id":"G3PD2",
"name":"Glycerol-3-phosphate dehydrogenase (NADP)",
"metabolites":{
"dhap_c":1.0,
"glyc3p_c":-1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12805",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"G3PD2"
]
},
"annotation":{
"bigg.reaction":[
"G3PD2"
],
"ec-code":[
"1.1.1.94"
],
"kegg.reaction":[
"R00844"
],
"metanetx.reaction":[
"MNXR99877"
],
"rhea":[
"11096",
"11099",
"11098",
"11097"
],
"sabiork":[
"1184"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00612"
]
}
},
{
"id":"BIOMASS_CELL_WALL",
"name":"Biomass: Cell wall (LPS and peptidoglycan)",
"metabolites":{
"bm_cw_c":1.0,
"colipacy_e":-0.694139,
"murein5p5p5p_p":-0.192214
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_CELL_WALL"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_CELL_WALL"
],
"sbo":"SBO:0000629"
}
},
{
"id":"PHYTES",
"name":"Geranylgeranyl-diphosphate geranylgeranyl-diphosphate geranylgeranyltransferase",
"metabolites":{
"ggdp_c":-2.0,
"ppi_c":1.0,
"prephytedp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10060",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"PHYTES"
]
},
"annotation":{
"bigg.reaction":[
"PHYTES"
],
"biocyc":[
"META:2.5.1.32-RXN"
],
"ec-code":[
"2.5.1.99",
"2.5.1.32"
],
"kegg.reaction":[
"R02065"
],
"metanetx.reaction":[
"MNXR102655"
],
"rhea":[
"22299",
"22296",
"22297",
"22298"
],
"sabiork":[
"2081"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01489"
]
}
},
{
"id":"RB15BPtcx",
"name":"Ribulose-1,5-bisphosphatase transport into the carboxyzome",
"metabolites":{
"rb15bp_c":-1.0,
"rb15bp_cx":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: carboxyzome",
"notes":{
"original_bigg_ids":[
"RB15BPtcx"
]
},
"annotation":{
"bigg.reaction":[
"RB15BPtcx"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MI3PP",
"name":"1D-myo-Inositol 3-phosphate phosphohydrolase",
"metabolites":{
"h2o_c":-1.0,
"inost_c":1.0,
"mi3p__D_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13150",
"subsystem":"Inositol phosphate metabolism",
"notes":{
"original_bigg_ids":[
"MI3PP"
]
},
"annotation":{
"bigg.reaction":[
"MI3PP"
],
"biocyc":[
"META:MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN"
],
"ec-code":[
"3.1.3.25"
],
"kegg.reaction":[
"R01187"
],
"metanetx.reaction":[
"MNXR101574"
],
"reactome.reaction":[
"R-DDI-1855210",
"R-BTA-1855210",
"R-RNO-1855210",
"R-XTR-1855210",
"R-DME-1855210",
"R-OSA-1855210",
"R-SSC-1855210",
"R-MMU-1855210",
"R-GGA-1855210",
"R-DRE-1855210",
"R-ATH-1855210",
"R-SCE-1855210",
"R-CFA-1855210",
"R-CEL-1855210",
"R-HSA-1855210",
"R-TGU-1855210"
],
"rhea":[
"30742",
"30739",
"30741",
"30740"
],
"sabiork":[
"1424"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00883"
]
}
},
{
"id":"MOHMT",
"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase",
"metabolites":{
"2dhp_c":1.0,
"3mob_c":-1.0,
"h2o_c":-1.0,
"mlthf_c":-1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12100",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"MOHMT"
]
},
"annotation":{
"bigg.reaction":[
"MOHMT"
],
"ec-code":[
"2.1.2.11"
],
"kegg.reaction":[
"R01226"
],
"metanetx.reaction":[
"MNXR101702"
],
"rhea":[
"11824",
"11827",
"11825",
"11826"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLXO3r",
"name":"Glyoxylate dehydrogenase",
"metabolites":{
"glx_c":-1.0,
"h2o2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"o2_c":-1.0,
"oxa_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"GLXO3r"
]
},
"annotation":{
"bigg.reaction":[
"GLXO3r"
],
"biocyc":[
"META:GLYOXYLATE-OXIDASE-RXN"
],
"ec-code":[
"1.2.3.5"
],
"kegg.reaction":[
"R00466"
],
"metanetx.reaction":[
"MNXR100305"
],
"reactome.reaction":[
"R-BTA-389862",
"R-SSC-389862",
"R-ATH-389862",
"R-RNO-389862",
"R-GGA-389862",
"R-DRE-389862",
"R-SCE-389862",
"R-CFA-389862",
"R-DME-389862",
"R-HSA-389862",
"R-CEL-389862",
"R-DDI-389862",
"R-OSA-389862",
"R-TGU-389862",
"R-MMU-389862",
"R-XTR-389862",
"R-SPO-389862"
],
"rhea":[
"14839",
"14838",
"14840",
"14837"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00325"
]
}
},
{
"id":"FBA",
"name":"Fructose-bisphosphate aldolase",
"metabolites":{
"dhap_c":1.0,
"fdp_c":-1.0,
"g3p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07385",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"FBA"
]
},
"annotation":{
"bigg.reaction":[
"FBA"
],
"ec-code":[
"4.1.2.13"
],
"kegg.reaction":[
"R01068"
],
"metanetx.reaction":[
"MNXR99459"
],
"rhea":[
"14729",
"14732",
"14731",
"14730"
],
"sabiork":[
"1338"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00786"
]
}
},
{
"id":"RZ5PP",
"name":"Alpha-ribazole 5-phosphate phosphatase",
"metabolites":{
"5prdmbz_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0,
"rdmbzi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"RZ5PP"
]
},
"annotation":{
"bigg.reaction":[
"RZ5PP"
],
"biocyc":[
"META:RXN-16788",
"META:RIBAZOLEPHOSPHAT-RXN"
],
"ec-code":[
"3.1.3.73"
],
"kegg.reaction":[
"R04594"
],
"metanetx.reaction":[
"MNXR104116"
],
"rhea":[
"24457",
"24456",
"24459",
"24458"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03150"
]
}
},
{
"id":"PROAKGOX1",
"name":"Prolyl 4-hydroxylase",
"metabolites":{
"4hpro_LT_c":1.0,
"akg_c":-1.0,
"co2_c":1.0,
"o2_c":-1.0,
"pro__L_c":-1.0,
"succ_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12600",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"PROHX"
]
},
"annotation":{
"bigg.reaction":[
"PROAKGOX1"
],
"biocyc":[
"META:RXN490-3641"
],
"ec-code":[
"1.14.11.2",
"1.14.11"
],
"kegg.reaction":[
"R01252"
],
"metanetx.reaction":[
"MNXR103186"
],
"rhea":[
"51511",
"51508",
"51509",
"51510"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00932"
]
}
},
{
"id":"ASAD",
"name":"Aspartate-semialdehyde dehydrogenase",
"metabolites":{
"4pasp_c":1.0,
"aspsa_c":-1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"pi_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS09375",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"ASADi"
]
},
"annotation":{
"bigg.reaction":[
"ASAD"
],
"biocyc":[
"META:ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN"
],
"ec-code":[
"1.2.1.11"
],
"kegg.reaction":[
"R02291"
],
"metanetx.reaction":[
"MNXR96039"
],
"rhea":[
"24285",
"24284",
"24286",
"24287"
],
"sabiork":[
"2255"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01643"
]
}
},
{
"id":"CYSS_2",
"name":"Cysteine synthase",
"metabolites":{
"ac_c":1.0,
"acser_c":-1.0,
"cys__L_c":1.0,
"h2s_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00870 or SYNPCC7942_RS13425 or SYNPCC7942_RS13380 or SYNPCC7942_RS07500",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"CYSS_2"
]
},
"annotation":{
"bigg.reaction":[
"CYSS_2"
],
"biocyc":[
"META:ACSERLY-RXN"
],
"ec-code":[
"2.5.1.47",
"2.5.1.65"
],
"kegg.reaction":[
"R00897"
],
"metanetx.reaction":[
"MNXR97007"
],
"rhea":[
"14829",
"14831",
"14830",
"14832"
],
"sabiork":[
"1220"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00649"
]
}
},
{
"id":"LYCOPC",
"name":"Lycopene cyclase",
"metabolites":{
"gcarote_c":1.0,
"lycop_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10460",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"LYCBC1"
]
},
"annotation":{
"bigg.reaction":[
"LYCOPC"
],
"biocyc":[
"META:RXN1F-150"
],
"ec-code":[
"5.5.1.19"
],
"kegg.reaction":[
"R05341"
],
"metanetx.reaction":[
"MNXR101031"
],
"rhea":[
"32220",
"32219",
"32222",
"32221"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03646"
]
}
},
{
"id":"ACOTA",
"name":"Acetylornithine transaminase",
"metabolites":{
"acg5sa_c":1.0,
"acorn_c":-1.0,
"akg_c":-1.0,
"glu__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04850",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ACOTA"
]
},
"annotation":{
"bigg.reaction":[
"ACOTA"
],
"biocyc":[
"META:ACETYLORNTRANSAM-RXN"
],
"ec-code":[
"2.6.1.11"
],
"kegg.reaction":[
"R02283"
],
"metanetx.reaction":[
"MNXR95388"
],
"rhea":[
"18051",
"18050",
"18052",
"18049"
],
"sabiork":[
"2248"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01637"
]
}
},
{
"id":"3HAD180",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C18:0)",
"metabolites":{
"3hoctaACP_c":-1.0,
"h2o_c":1.0,
"toctd2eACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD180"
]
},
"annotation":{
"bigg.reaction":[
"3HAD180"
],
"ec-code":[
"4.2.1.61",
"4.2.1.-",
"2.3.1.-"
],
"kegg.reaction":[
"R07764"
],
"metanetx.reaction":[
"MNXR94883"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07979"
]
}
},
{
"id":"FTHFD",
"name":"Formyltetrahydrofolate deformylase",
"metabolites":{
"10fthf_c":-1.0,
"for_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05175",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"FTHFD"
]
},
"annotation":{
"bigg.reaction":[
"FTHFD"
],
"ec-code":[
"3.5.1.10"
],
"kegg.reaction":[
"R00944"
],
"metanetx.reaction":[
"MNXR99669"
],
"rhea":[
"19833",
"19835",
"19834",
"19836"
],
"sabiork":[
"1259"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ALDD2y",
"name":"Aldehyde dehydrogenase (acetaldehyde, NADP)",
"metabolites":{
"ac_c":1.0,
"acald_c":-1.0,
"h2o_c":-1.0,
"h_c":2.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02490",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"ALDD2y"
]
},
"annotation":{
"bigg.reaction":[
"ALDD2y"
],
"biocyc":[
"META:RXN0-3962"
],
"ec-code":[
"1.2.1.4",
"1.2.1.-",
"1.2.1.5"
],
"kegg.reaction":[
"R00711"
],
"metanetx.reaction":[
"MNXR95750"
],
"rhea":[
"25298",
"25300",
"25301",
"25299"
],
"sabiork":[
"541"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00507"
]
}
},
{
"id":"3OAS80",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C8:0)",
"metabolites":{
"3ooctACP_c":1.0,
"ACP_c":1.0,
"co2_c":1.0,
"h_c":-1.0,
"hexACP_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS80"
]
},
"annotation":{
"bigg.reaction":[
"3OAS80"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94964"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PSCVT",
"name":"3-phosphoshikimate 1-carboxyvinyltransferase",
"metabolites":{
"3psme_c":1.0,
"pep_c":-1.0,
"pi_c":1.0,
"skm5p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01180",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"PSCVT"
]
},
"annotation":{
"bigg.reaction":[
"PSCVT"
],
"biocyc":[
"META:2.5.1.19-RXN"
],
"ec-code":[
"2.5.1.19"
],
"kegg.reaction":[
"R03460"
],
"metanetx.reaction":[
"MNXR103226"
],
"reactome.reaction":[
"R-MTU-964886"
],
"rhea":[
"21259",
"21257",
"21256",
"21258"
],
"sabiork":[
"3254"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02476"
]
}
},
{
"id":"CBPS",
"name":"Carbamoyl-phosphate synthase (glutamine-hydrolysing)",
"metabolites":{
"adp_c":2.0,
"atp_c":-2.0,
"cbp_c":1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"h_c":2.0,
"hco3_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03645 and SYNPCC7942_RS10760",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"CBPS"
]
},
"annotation":{
"bigg.reaction":[
"CBPS"
],
"biocyc":[
"META:CARBPSYN-RXN"
],
"ec-code":[
"6.3.5.5"
],
"kegg.reaction":[
"R00575"
],
"metanetx.reaction":[
"MNXR96485"
],
"reactome.reaction":[
"R-RNO-73577",
"R-GGA-73577",
"R-DRE-73577",
"R-ATH-73577",
"R-CFA-73577",
"R-MMU-73577",
"R-OSA-73577",
"R-CEL-73577",
"R-SPO-73577",
"R-GGA-419440",
"R-BTA-73577",
"R-SCE-73577",
"R-XTR-73577",
"R-DDI-73577",
"R-HSA-73577",
"R-PFA-73577",
"R-TGU-73577",
"R-SSC-73577",
"R-DME-73577"
],
"rhea":[
"18635",
"18633",
"18636",
"18634"
],
"sabiork":[
"203"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00414"
]
}
},
{
"id":"NTPP8",
"name":"Nucleoside triphosphate pyrophosphorylase (utp)",
"metabolites":{
"h2o_c":-1.0,
"h_c":1.0,
"ppi_c":1.0,
"ump_c":1.0,
"utp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07630",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NTPP8"
]
},
"annotation":{
"bigg.reaction":[
"NTPP8"
],
"biocyc":[
"META:RXN-14139"
],
"ec-code":[
"3.6.1.8",
"3.6.1.9"
],
"kegg.reaction":[
"R00662"
],
"metanetx.reaction":[
"MNXR102055"
],
"rhea":[
"29397",
"29398",
"29395",
"29396"
],
"sabiork":[
"202"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00463"
]
}
},
{
"id":"MEPCT",
"name":"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase",
"metabolites":{
"2me4p_c":-1.0,
"4c2me_c":1.0,
"ctp_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03490",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"MEPCT"
]
},
"annotation":{
"bigg.reaction":[
"MEPCT"
],
"biocyc":[
"META:2.7.7.60-RXN"
],
"ec-code":[
"2.7.7.60"
],
"kegg.reaction":[
"R05633"
],
"metanetx.reaction":[
"MNXR96807"
],
"rhea":[
"13430",
"13429",
"13432",
"13431"
],
"sabiork":[
"5231"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03907"
]
}
},
{
"id":"PDX5POi",
"name":"Pyridoxine 5'-phosphate oxidase",
"metabolites":{
"h2o2_c":1.0,
"o2_c":-1.0,
"pdx5p_c":-1.0,
"pydx5p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00345",
"subsystem":"Cofactor biosynthesis: Vitamin B6",
"notes":{
"original_bigg_ids":[
"PDX5POi"
]
},
"annotation":{
"bigg.reaction":[
"PDX5POi"
],
"biocyc":[
"META:PNPOXI-RXN"
],
"ec-code":[
"1.4.3.5"
],
"kegg.reaction":[
"R00278"
],
"metanetx.reaction":[
"MNXR102438"
],
"reactome.reaction":[
"R-CFA-965019",
"R-HSA-965019",
"R-CEL-965019",
"R-XTR-965019",
"R-MMU-965019",
"R-DRE-965019",
"R-SCE-965019",
"R-SPO-965019",
"R-GGA-965019",
"R-DME-965019",
"R-SSC-965019",
"R-BTA-965019",
"R-RNO-965019",
"R-DDI-965019"
],
"rhea":[
"15151",
"15149",
"15152",
"15150"
],
"sabiork":[
"778"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00209"
]
}
},
{
"id":"DHAD2",
"name":"Dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)",
"metabolites":{
"23dhmp_c":-1.0,
"3mop_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03210",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"DHAD2"
]
},
"annotation":{
"bigg.reaction":[
"DHAD2"
],
"biocyc":[
"META:DIHYDROXYMETVALDEHYDRAT-RXN"
],
"ec-code":[
"4.2.1.9"
],
"kegg.reaction":[
"R05070"
],
"metanetx.reaction":[
"MNXR97359"
],
"rhea":[
"27694",
"27696",
"27697",
"27695"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DHFS",
"name":"Dihydrofolate synthase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dhf_c":1.0,
"dhpt_c":-1.0,
"glu__L_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04855",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"DHFS"
]
},
"annotation":{
"bigg.reaction":[
"DHFS"
],
"biocyc":[
"META:DIHYDROFOLATESYNTH-RXN"
],
"ec-code":[
"6.3.2.12",
"6.3.2.17"
],
"kegg.reaction":[
"R02237"
],
"metanetx.reaction":[
"MNXR140043"
],
"rhea":[
"23585",
"23587",
"23584",
"23586"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01603"
]
}
},
{
"id":"PGCD",
"name":"Phosphoglycerate dehydrogenase",
"metabolites":{
"3pg_c":-1.0,
"3php_c":1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07670",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"PGCD"
]
},
"annotation":{
"bigg.reaction":[
"PGCD"
],
"biocyc":[
"META:PGLYCDEHYDROG-RXN"
],
"ec-code":[
"1.1.1.95"
],
"kegg.reaction":[
"R01513"
],
"metanetx.reaction":[
"MNXR102527"
],
"reactome.reaction":[
"R-DME-977348",
"R-RNO-977348",
"R-ATH-977348",
"R-GGA-977348",
"R-DDI-977348",
"R-HSA-977348",
"R-SCE-977348",
"R-SPO-977348",
"R-OSA-977348",
"R-SSC-977348",
"R-CEL-977348",
"R-MMU-977348",
"R-DRE-977348",
"R-BTA-977348",
"R-CFA-977348",
"R-XTR-977348"
],
"rhea":[
"12644",
"12643",
"12642",
"12641"
],
"sabiork":[
"8970"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01101"
]
}
},
{
"id":"SPMDabcpp",
"name":"Spermidine transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"spmd_c":1.0,
"spmd_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11515",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"SPMDabcpp"
]
},
"annotation":{
"bigg.reaction":[
"SPMDabcpp"
],
"biocyc":[
"META:ABC-24-RXN"
],
"ec-code":[
"3.6.3.31"
],
"metanetx.reaction":[
"MNXR104494"
],
"rhea":[
"30000#1",
"29999#1",
"30002#1",
"30001#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05175",
"rxn11262",
"rxn09263"
]
}
},
{
"id":"NTD6",
"name":"5'-nucleotidase (dAMP)",
"metabolites":{
"dad_2_c":1.0,
"damp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10465",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NTD6"
]
},
"annotation":{
"bigg.reaction":[
"NTD6"
],
"biocyc":[
"META:RXN-14161"
],
"ec-code":[
"3.1.3.5",
"3.1.3.89"
],
"kegg.reaction":[
"R02088"
],
"metanetx.reaction":[
"MNXR102036"
],
"rhea":[
"29371",
"29374",
"29372",
"29373"
],
"sabiork":[
"282"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn13134",
"rxn01507"
]
}
},
{
"id":"NNDMBRT",
"name":"Nicotinate-nucleotide dimethylbenzimidazole phosphoribosyltransferase",
"metabolites":{
"5prdmbz_c":1.0,
"dmbzid_c":-1.0,
"h_c":1.0,
"nac_c":1.0,
"nicrnt_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11525",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"NNDMBRT"
]
},
"annotation":{
"bigg.reaction":[
"NNDMBRT"
],
"biocyc":[
"META:DMBPPRIBOSYLTRANS-RXN"
],
"ec-code":[
"2.4.2.21"
],
"kegg.reaction":[
"R04148"
],
"metanetx.reaction":[
"MNXR101979"
],
"rhea":[
"11196",
"11197",
"11199",
"11198"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02897"
]
}
},
{
"id":"PRATPP",
"name":"Phosphoribosyl-ATP pyrophosphatase",
"metabolites":{
"h2o_c":-1.0,
"h_c":1.0,
"ppi_c":1.0,
"prbamp_c":1.0,
"prbatp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10115",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"PRATPP"
]
},
"annotation":{
"bigg.reaction":[
"PRATPP"
],
"biocyc":[
"META:HISTPRATPHYD-RXN"
],
"ec-code":[
"3.6.1.31"
],
"kegg.reaction":[
"R04035"
],
"metanetx.reaction":[
"MNXR103155"
],
"rhea":[
"22829",
"22828",
"22830",
"22831"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02834"
]
}
},
{
"id":"ASNN",
"name":"L-asparaginase",
"metabolites":{
"asn__L_c":-1.0,
"asp__L_c":1.0,
"h2o_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00840",
"subsystem":"Amino acid metabolism: Asparagine metabolism",
"notes":{
"original_bigg_ids":[
"ASNN"
]
},
"annotation":{
"bigg.reaction":[
"ASNN"
],
"biocyc":[
"META:ASPARAGHYD-RXN"
],
"ec-code":[
"3.5.1.38",
"3.5.5.4",
"3.5.1.1"
],
"kegg.reaction":[
"R00485"
],
"metanetx.reaction":[
"MNXR96056"
],
"reactome.reaction":[
"R-DDI-6797627",
"R-BTA-6797627",
"R-DRE-6797627",
"R-XTR-6797627",
"R-RNO-6797627",
"R-SPO-6797627",
"R-MMU-6797627",
"R-GGA-6797627",
"R-HSA-6797627",
"R-TGU-6797627",
"R-CEL-6797627",
"R-DME-6797627",
"R-CFA-6797627"
],
"rhea":[
"21017",
"21019",
"21016",
"21018"
],
"sabiork":[
"917"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00342"
]
}
},
{
"id":"SERAT",
"name":"Serine O-acetyltransferase",
"metabolites":{
"accoa_c":-1.0,
"acser_c":1.0,
"coa_c":1.0,
"ser__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12295 or SYNPCC7942_RS13375",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"SERAT"
]
},
"annotation":{
"bigg.reaction":[
"SERAT"
],
"biocyc":[
"META:SERINE-O-ACETTRAN-RXN"
],
"ec-code":[
"2.3.1.30"
],
"kegg.reaction":[
"R00586"
],
"metanetx.reaction":[
"MNXR104275"
],
"reactome.reaction":[
"R-MTU-936615"
],
"rhea":[
"24560",
"24563",
"24562",
"24561"
],
"sabiork":[
"986"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00423"
]
}
},
{
"id":"PRAIS",
"name":"Phosphoribosylaminoimidazole synthase",
"metabolites":{
"adp_c":1.0,
"air_c":1.0,
"atp_c":-1.0,
"fpram_c":-1.0,
"h_c":2.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04395",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"PRAIS"
]
},
"annotation":{
"bigg.reaction":[
"PRAIS"
],
"ec-code":[
"6.3.3.1"
],
"metanetx.reaction":[
"MNXR138720"
],
"rhea":[
"23033",
"23032",
"23034",
"23035"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PRAMPC",
"name":"Phosphoribosyl-AMP cyclohydrolase",
"metabolites":{
"h2o_c":-1.0,
"prbamp_c":-1.0,
"prfp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10115",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"PRAMPC"
]
},
"annotation":{
"bigg.reaction":[
"PRAMPC"
],
"biocyc":[
"META:HISTCYCLOHYD-RXN"
],
"ec-code":[
"3.5.4.19"
],
"kegg.reaction":[
"R04037"
],
"metanetx.reaction":[
"MNXR103154"
],
"rhea":[
"20049",
"20050",
"20051",
"20052"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02835"
]
}
},
{
"id":"AMPMS3",
"name":"4-amino-2-methyl-5-phosphomethylpyrimidine synthetase",
"metabolites":{
"4ampm_c":1.0,
"air_c":-1.0,
"amet_c":-1.0,
"co_c":1.0,
"dad_5_c":1.0,
"for_c":1.0,
"h_c":2.0,
"met__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05625",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"AMPMS3"
]
},
"annotation":{
"bigg.reaction":[
"AMPMS3"
],
"sbo":"SBO:0000176"
}
},
{
"id":"G1PCTYT",
"name":"Alpha-D-glucose cytidylyltransferase",
"metabolites":{
"cdpglc_c":1.0,
"ctp_c":-1.0,
"g1p_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00310",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"G1PCTYT"
]
},
"annotation":{
"bigg.reaction":[
"G1PCTYT"
],
"biocyc":[
"META:2.7.7.33-RXN"
],
"ec-code":[
"2.7.7.33"
],
"kegg.reaction":[
"R00956"
],
"metanetx.reaction":[
"MNXR99842"
],
"sabiork":[
"1269"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00702"
]
}
},
{
"id":"ACBIPGT",
"name":"Adenosyl cobinamide phosphate guanyltransferase",
"metabolites":{
"adocbip_c":-1.0,
"agdpcbi_c":1.0,
"gtp_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13875",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"ACBIPGT"
]
},
"annotation":{
"bigg.reaction":[
"ACBIPGT"
],
"biocyc":[
"META:COBINPGUANYLYLTRANS-RXN"
],
"ec-code":[
"2.7.7.62"
],
"kegg.reaction":[
"R05222"
],
"metanetx.reaction":[
"MNXR95216"
],
"rhea":[
"22712",
"22715",
"22713",
"22714"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03537"
]
}
},
{
"id":"SEPHCHCS",
"name":"2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase",
"metabolites":{
"2sephchc_c":1.0,
"akg_c":-1.0,
"co2_c":1.0,
"h_c":-1.0,
"ichor_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07340",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"SEPHCHCS"
]
},
"annotation":{
"bigg.reaction":[
"SEPHCHCS"
],
"ec-code":[
"2.2.1.9"
],
"kegg.reaction":[
"R08165"
],
"metanetx.reaction":[
"MNXR104329"
],
"rhea":[
"25593",
"25596",
"25595",
"25594"
],
"sabiork":[
"12389"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11702"
]
}
},
{
"id":"NMNDA",
"name":"Nicotinamide-nucleotide amidase",
"metabolites":{
"h2o_c":-1.0,
"nh4_c":1.0,
"nicrnt_c":1.0,
"nmn_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01425",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NMNDA"
]
},
"annotation":{
"bigg.reaction":[
"NMNDA"
],
"biocyc":[
"META:NMNAMIDOHYDRO-RXN"
],
"ec-code":[
"3.5.1.42"
],
"kegg.reaction":[
"R02322"
],
"metanetx.reaction":[
"MNXR101969"
],
"rhea":[
"12402",
"12400",
"12403",
"12401"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01669"
]
}
},
{
"id":"CA2abcpp",
"name":"Calcium transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"ca2_c":1.0,
"ca2_p":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05555",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"CA2abcpp"
]
},
"annotation":{
"bigg.reaction":[
"CA2abcpp"
],
"biocyc":[
"META:TRANS-RXN-193"
],
"ec-code":[
"3.6.3.8",
"3.6.3"
],
"metanetx.reaction":[
"MNXR96434"
],
"rhea":[
"18107#2",
"18106#2",
"18105#2",
"18108#2"
],
"sabiork":[
"6949#2"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10447"
]
}
},
{
"id":"ORNTAC",
"name":"Ornithine transacetylase",
"metabolites":{
"acglu_c":1.0,
"acorn_c":-1.0,
"glu__L_c":-1.0,
"orn_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09615",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ORNTAC"
]
},
"annotation":{
"bigg.reaction":[
"ORNTAC"
],
"biocyc":[
"META:GLUTAMATE-N-ACETYLTRANSFERASE-RXN"
],
"ec-code":[
"2.3.1.35"
],
"kegg.reaction":[
"R02282"
],
"metanetx.reaction":[
"MNXR102221"
],
"rhea":[
"15349",
"15350",
"15351",
"15352"
],
"sabiork":[
"2247"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01636"
]
}
},
{
"id":"SUCBZS",
"name":"O-succinylbenzoate-CoA synthase",
"metabolites":{
"2shchc_c":-1.0,
"h2o_c":1.0,
"sucbz_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05245",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"SUCBZS"
]
},
"annotation":{
"bigg.reaction":[
"SUCBZS"
],
"biocyc":[
"META:O-SUCCINYLBENZOATE-COA-SYN-RXN"
],
"ec-code":[
"4.2.1.113"
],
"kegg.reaction":[
"R04031"
],
"metanetx.reaction":[
"MNXR108605"
],
"rhea":[
"10196",
"10199",
"10198",
"10197"
],
"sabiork":[
"3766"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02832"
]
}
},
{
"id":"UHGADA2",
"name":"UDP-3-O-acetylglucosamine deacetylase (Synechococcus elongatus 7942)",
"metabolites":{
"ac_c":1.0,
"h2o_c":-1.0,
"u3aga2_c":-1.0,
"u3hga2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04780",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"UHGADA2"
]
},
"annotation":{
"bigg.reaction":[
"UHGADA2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DHNANT",
"name":"1,4-dihydroxy-2-napthoyl phytyltransferase",
"metabolites":{
"co2_c":1.0,
"dhna_c":-1.0,
"dmtphllqne_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"phdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06990 and SYNPCC7942_RS12725",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"DHNANT"
]
},
"annotation":{
"bigg.reaction":[
"DHNANT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ASPO6",
"name":"L-aspartate oxidase",
"metabolites":{
"asp__L_c":-1.0,
"h2o2_c":1.0,
"h_c":1.0,
"iasp_c":1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09540",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"ASPO6"
]
},
"annotation":{
"bigg.reaction":[
"ASPO6"
],
"biocyc":[
"META:L-ASPARTATE-OXID-RXN"
],
"ec-code":[
"1.4.3.16"
],
"kegg.reaction":[
"R00481"
],
"metanetx.reaction":[
"MNXR96094"
],
"rhea":[
"25879",
"25878",
"25877",
"25876"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00338"
]
}
},
{
"id":"HGYDAS",
"name":"Hydrogenobyrinic acid a,c-diamide synthase",
"metabolites":{
"adp_c":2.0,
"atp_c":-2.0,
"gln__L_c":-2.0,
"glu__L_c":2.0,
"h2o_c":-2.0,
"h_c":2.0,
"hgbam_c":1.0,
"hgbyr_c":-1.0,
"pi_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09410",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"HGYDAS"
]
},
"annotation":{
"bigg.reaction":[
"HGYDAS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GGDPR",
"name":"Geranylgeranyl diphosphate reductase",
"metabolites":{
"ggdp_c":-1.0,
"h_c":-3.0,
"nadp_c":3.0,
"nadph_c":-3.0,
"phdp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01965",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"GGDPR"
]
},
"annotation":{
"bigg.reaction":[
"GGDPR"
],
"biocyc":[
"META:RXN-10625"
],
"ec-code":[
"1.3.1.83"
],
"kegg.reaction":[
"R02063"
],
"metanetx.reaction":[
"MNXR100111"
],
"rhea":[
"26231",
"26232",
"26229",
"26230"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01487"
]
}
},
{
"id":"ASP1DC",
"name":"Aspartate 1-decarboxylase",
"metabolites":{
"ala_B_c":1.0,
"asp__L_c":-1.0,
"co2_c":1.0,
"h_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11740",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"ASP1DC"
]
},
"annotation":{
"bigg.reaction":[
"ASP1DC"
],
"biocyc":[
"META:ASPDECARBOX-RXN"
],
"ec-code":[
"4.1.1.15",
"4.1.1.11"
],
"kegg.reaction":[
"R00489"
],
"metanetx.reaction":[
"MNXR96077"
],
"rhea":[
"19500",
"19499",
"19498",
"19497"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00346"
]
}
},
{
"id":"PPNDH",
"name":"Prephenate dehydratase",
"metabolites":{
"co2_c":1.0,
"h2o_c":1.0,
"h_c":-1.0,
"phpyr_c":1.0,
"pphn_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04540",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"PPNDH"
]
},
"annotation":{
"bigg.reaction":[
"PPNDH"
],
"biocyc":[
"META:PREPHENATEDEHYDRAT-RXN"
],
"ec-code":[
"4.2.1.91",
"4.2.1.51"
],
"kegg.reaction":[
"R01373"
],
"metanetx.reaction":[
"MNXR126086"
],
"rhea":[
"21648",
"21649",
"21650",
"21651"
],
"sabiork":[
"1575"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01000"
]
}
},
{
"id":"ASPK",
"name":"Aspartate kinase",
"metabolites":{
"4pasp_c":1.0,
"adp_c":1.0,
"asp__L_c":-1.0,
"atp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05135",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"ASPK"
]
},
"annotation":{
"bigg.reaction":[
"ASPK"
],
"biocyc":[
"META:ASPARTATEKIN-RXN"
],
"ec-code":[
"2.7.2.4"
],
"kegg.reaction":[
"R00480"
],
"metanetx.reaction":[
"MNXR96085"
],
"rhea":[
"23779",
"23777",
"23776",
"23778"
],
"sabiork":[
"912"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00337"
]
}
},
{
"id":"DXPS",
"name":"1-deoxy-D-xylulose 5-phosphate synthase",
"metabolites":{
"co2_c":1.0,
"dxyl5p_c":1.0,
"g3p_c":-1.0,
"h_c":-1.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02195",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"DXPS"
]
},
"annotation":{
"bigg.reaction":[
"DXPS"
],
"biocyc":[
"META:DXS-RXN"
],
"ec-code":[
"2.2.1.7"
],
"kegg.reaction":[
"R05636"
],
"metanetx.reaction":[
"MNXR97831"
],
"rhea":[
"12605",
"12607",
"12608",
"12606"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03909"
]
}
},
{
"id":"ME2",
"name":"Malic enzyme (NADP)",
"metabolites":{
"co2_c":1.0,
"mal__L_c":-1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"pyr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06635",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"ME2"
]
},
"annotation":{
"bigg.reaction":[
"ME2"
],
"biocyc":[
"META:MALIC-NADP-RXN"
],
"ec-code":[
"1.1.1.40"
],
"kegg.reaction":[
"R00216"
],
"metanetx.reaction":[
"MNXR101443"
],
"rhea":[
"18255",
"18256",
"18254",
"18253"
],
"sabiork":[
"142"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00161"
]
}
},
{
"id":"3PGtcx",
"name":"3-phosphoglycerate transport out of the carboxyzome",
"metabolites":{
"3pg_c":1.0,
"3pg_cx":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: carboxyzome",
"notes":{
"original_bigg_ids":[
"3PGtcx"
]
},
"annotation":{
"bigg.reaction":[
"3PGtcx"
],
"sbo":"SBO:0000185"
}
},
{
"id":"DDPGA",
"name":"2-dehydro-3-deoxy-phosphogluconate aldolase",
"metabolites":{
"4h2oglt_c":-1.0,
"glx_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00090",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"DDPGA"
]
},
"annotation":{
"bigg.reaction":[
"DDPGA"
],
"biocyc":[
"META:4OH2OXOGLUTARALDOL-RXN"
],
"ec-code":[
"4.1.3.16",
"4.1.3.42"
],
"kegg.reaction":[
"R00470"
],
"metanetx.reaction":[
"MNXR97219"
],
"rhea":[
"18171",
"18172",
"18170",
"18169"
],
"sabiork":[
"903"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00328"
]
}
},
{
"id":"PAPSR",
"name":"Phosphoadenylyl-sulfate reductase (thioredoxin)",
"metabolites":{
"h_c":2.0,
"pap_c":1.0,
"paps_c":-1.0,
"so3_c":1.0,
"trdox_c":1.0,
"trdrd_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12715",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"PAPSR"
]
},
"annotation":{
"bigg.reaction":[
"PAPSR"
],
"biocyc":[
"META:1.8.4.8-RXN"
],
"ec-code":[
"1.8.4.8"
],
"kegg.reaction":[
"R02021"
],
"metanetx.reaction":[
"MNXR102376"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05239"
]
}
},
{
"id":"SADT",
"name":"Sulfate adenylyltransferase",
"metabolites":{
"aps_c":1.0,
"atp_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0,
"so4_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01505",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"SADT"
]
},
"annotation":{
"bigg.reaction":[
"SADT"
],
"biocyc":[
"META:SULFATE-ADENYLYLTRANS-RXN"
],
"ec-code":[
"2.7.7.4"
],
"kegg.reaction":[
"R00529"
],
"metanetx.reaction":[
"MNXR104240"
],
"reactome.reaction":[
"R-BTA-174392",
"R-SPO-174392",
"R-GGA-174392",
"R-DME-174392",
"R-OSA-174392",
"R-TGU-174392",
"R-SSC-174392",
"R-SCE-174392",
"R-CEL-174392",
"R-DRE-174392",
"R-CFA-174392",
"R-RNO-174392",
"R-ATH-174392",
"R-MMU-174392",
"R-HSA-174392",
"R-MTU-936729",
"R-XTR-174392"
],
"rhea":[
"18135",
"18134",
"18136",
"18133"
],
"sabiork":[
"947"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00379"
]
}
},
{
"id":"BIOMASS_COFACTORS",
"name":"Biomass: cofactor pool",
"metabolites":{
"5mthf_c":-0.0213,
"adocbl_c":-0.0043,
"bm_cofactors_c":1.0,
"btamp_c":-0.022,
"coa_c":-0.016,
"fad_c":-0.0214,
"fe2_c":-0.6518,
"fe3_c":-0.6518,
"gthbpt_c":-1.5013,
"hemeO_c":-0.0213,
"k_c":-0.0013,
"lipopb_c":-0.022,
"mlthf_c":-0.0214,
"na1_c":-0.0001,
"nad_c":-0.1708,
"nadh_c":-0.0043,
"nadp_c":-0.0107,
"nadph_c":-0.032,
"phllqne_c":-0.0169,
"pq_um":-0.015,
"ptrc_c":-0.0344,
"pydx5p_c":-0.022,
"sheme_c":-0.0213,
"spmd_c":-0.0736,
"thf_c":-0.0214,
"thmpp_c":-0.0213,
"udcpdp_c":-0.0096
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_COFACTORS"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_COFACTORS"
],
"sbo":"SBO:0000629"
}
},
{
"id":"DPCOAK",
"name":"Dephospho-CoA kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"coa_c":1.0,
"dpcoa_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01390",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"DPCOAK"
]
},
"annotation":{
"bigg.reaction":[
"DPCOAK"
],
"biocyc":[
"META:DEPHOSPHOCOAKIN-RXN"
],
"ec-code":[
"2.7.1.24"
],
"kegg.reaction":[
"R00130"
],
"metanetx.reaction":[
"MNXR97762"
],
"reactome.reaction":[
"R-XTR-196773",
"R-SSC-196773",
"R-RNO-196773",
"R-CFA-196773",
"R-DDI-196773",
"R-CEL-196773",
"R-GGA-196773",
"R-MMU-196773",
"R-OSA-196773",
"R-PFA-196773",
"R-SCE-196773",
"R-DRE-196773",
"R-TGU-196773",
"R-ATH-196773",
"R-DME-196773",
"R-HSA-196773",
"R-BTA-196773"
],
"rhea":[
"18248",
"18245",
"18247",
"18246"
],
"sabiork":[
"48"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00100"
]
}
},
{
"id":"NH4tpp",
"name":"Ammonia reversible transport (periplasm)",
"metabolites":{
"nh4_c":1.0,
"nh4_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02260 or SYNPCC7942_RS11585",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"NH4tpp"
]
},
"annotation":{
"bigg.reaction":[
"NH4tpp"
],
"biocyc":[
"META:TRANS-RXN0-206",
"META:RXN-9615",
"META:TRANS-RXN0-544"
],
"metanetx.reaction":[
"MNXR101950"
],
"reactome.reaction":[
"R-CEL-444416",
"R-SSC-444416",
"R-DDI-444416",
"R-MMU-444416",
"R-DRE-444416",
"R-GGA-444416",
"R-CFA-444416",
"R-HSA-444416",
"R-XTR-444416",
"R-BTA-444416",
"R-RNO-444416",
"R-TGU-444416",
"R-DME-444416"
],
"rhea":[
"28749",
"28748",
"28750",
"28747"
],
"sabiork":[
"11683"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn13364",
"rxn09835",
"rxn05466",
"rxn08987",
"rxn08986",
"rxn09736"
]
}
},
{
"id":"DM_h2_c",
"name":"Modeling: demand reaction (h2 c)",
"metabolites":{
"h2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_h2_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_h2_c"
],
"sbo":"SBO:0000628"
}
},
{
"id":"PC11M",
"name":"Precorrin-4 C11-methyltransferase",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"h_c":1.0,
"pre4_c":-1.0,
"pre5_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06300",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PC11M"
]
},
"annotation":{
"bigg.reaction":[
"PC11M"
],
"biocyc":[
"META:2.1.1.133-RXN"
],
"ec-code":[
"2.1.1.133"
],
"kegg.reaction":[
"R05181"
],
"metanetx.reaction":[
"MNXR138686"
],
"rhea":[
"22012",
"22015",
"22013",
"22014"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03514"
]
}
},
{
"id":"DPOR",
"name":"Light independent protochlorophyllide oxidoreductase",
"metabolites":{
"adp_c":2.0,
"atp_c":-2.0,
"chlld_c":1.0,
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h2o_c":-2.0,
"pchlld_c":-1.0,
"pi_c":2.0
},
"lower_bound":0.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS07260 and SYNPCC7942_RS07265 and SYNPCC7942_RS09325",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"DPOR"
]
},
"annotation":{
"bigg.reaction":[
"DPOR"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ARGSL",
"name":"Argininosuccinate lyase",
"metabolites":{
"arg__L_c":1.0,
"argsuc_c":-1.0,
"fum_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12575",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ARGSL"
]
},
"annotation":{
"bigg.reaction":[
"ARGSL"
],
"biocyc":[
"META:ARGSUCCINLYA-RXN"
],
"ec-code":[
"4.3.2.1"
],
"kegg.reaction":[
"R01086"
],
"metanetx.reaction":[
"MNXR138059"
],
"reactome.reaction":[
"R-SSC-70573",
"R-OSA-70573",
"R-SCE-70573",
"R-SPO-70573",
"R-GGA-70573",
"R-BTA-70573",
"R-DRE-70573",
"R-HSA-70573",
"R-TGU-70573",
"R-ATH-70573",
"R-XTR-70573",
"R-DME-70573"
],
"rhea":[
"24021",
"24020",
"24022",
"24023"
],
"sabiork":[
"573"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00802"
]
}
},
{
"id":"HSK",
"name":"Homoserine kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"hom__L_c":-1.0,
"phom_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07365",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"HSK"
]
},
"annotation":{
"bigg.reaction":[
"HSK"
],
"biocyc":[
"META:HOMOSERKIN-RXN"
],
"ec-code":[
"2.7.1.39"
],
"kegg.reaction":[
"R01771"
],
"metanetx.reaction":[
"MNXR100737"
],
"rhea":[
"13985",
"13987",
"13986",
"13988"
],
"sabiork":[
"1866"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01300"
]
}
},
{
"id":"MTHFD",
"name":"Methylenetetrahydrofolate dehydrogenase (NADP)",
"metabolites":{
"methf_c":1.0,
"mlthf_c":-1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04030",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"MTHFD"
]
},
"annotation":{
"bigg.reaction":[
"MTHFD"
],
"ec-code":[
"1.5.1.5"
],
"kegg.reaction":[
"R01220"
],
"metanetx.reaction":[
"MNXR101749"
],
"rhea":[
"22814",
"22813",
"22815",
"22812"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PMDPHT",
"name":"Pyrimidine phosphatase",
"metabolites":{
"4r5au_c":1.0,
"5aprbu_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05155",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"PMDPHT"
]
},
"annotation":{
"bigg.reaction":[
"PMDPHT"
],
"biocyc":[
"META:RIBOPHOSPHAT-RXN"
],
"ec-code":[
"3.1.3.104",
"3.1.3.-"
],
"kegg.reaction":[
"R07280"
],
"metanetx.reaction":[
"MNXR96145"
],
"rhea":[
"25197",
"25200",
"25198",
"25199"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05039"
]
}
},
{
"id":"ARGabcpp",
"name":"L-arginine transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"arg__L_c":1.0,
"arg__L_p":-1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01255 and SYNPCC7942_RS01260 and SYNPCC7942_RS01265 and SYNPCC7942_RS01270",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"ARGabcpp"
]
},
"annotation":{
"bigg.reaction":[
"ARGabcpp"
],
"biocyc":[
"META:ABC-4-RXN"
],
"ec-code":[
"3.6.3.21"
],
"metanetx.reaction":[
"MNXR95952"
],
"rhea":[
"29880#1",
"29882#1",
"29881#1",
"29879#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08151",
"rxn11236",
"rxn05154"
]
}
},
{
"id":"3HAD140",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C14:0)",
"metabolites":{
"3hmrsACP_c":-1.0,
"h2o_c":1.0,
"tmrs2eACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD140"
]
},
"annotation":{
"bigg.reaction":[
"3HAD140"
],
"biocyc":[
"META:RXN-9537"
],
"ec-code":[
"2.3.1.85",
"2.3.1.86",
"4.2.1.61",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04568"
],
"metanetx.reaction":[
"MNXR94879"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05335"
]
}
},
{
"id":"ARGOXRum",
"name":"Arginine:plastoquinone oxidoreductase (thylakoid)",
"metabolites":{
"5g2oxpt_c":1.0,
"arg__L_c":-1.0,
"h2o_c":-1.0,
"nh4_c":1.0,
"pq_um":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01880",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ARGOXRum"
]
},
"annotation":{
"bigg.reaction":[
"ARGOXRum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"DAPE",
"name":"Diaminopimelate epimerase",
"metabolites":{
"26dap_LL_c":-1.0,
"26dap__M_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09780",
"subsystem":"Amino acid metabolism: Lysine biosynthesis",
"notes":{
"original_bigg_ids":[
"DAPE"
]
},
"annotation":{
"bigg.reaction":[
"DAPE"
],
"biocyc":[
"META:DIAMINOPIMEPIM-RXN"
],
"ec-code":[
"5.1.1.7"
],
"kegg.reaction":[
"R02735"
],
"metanetx.reaction":[
"MNXR97143"
],
"rhea":[
"15396",
"15395",
"15393",
"15394"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01974"
]
}
},
{
"id":"BCAROHX2",
"name":"Beta-carotene hydroxylase",
"metabolites":{
"bcryptox_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0,
"zeax_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12395",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"BCAROHX2"
]
},
"annotation":{
"bigg.reaction":[
"BCAROHX2"
],
"metanetx.reaction":[
"MNXR96219"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HPPK",
"name":"2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase",
"metabolites":{
"2ahhmd_c":1.0,
"2ahhmp_c":-1.0,
"amp_c":1.0,
"atp_c":-1.0,
"h_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11545",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"HPPK"
]
},
"annotation":{
"bigg.reaction":[
"HPPK"
],
"metanetx.reaction":[
"MNXR138523"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PANTS",
"name":"Pantothenate synthase",
"metabolites":{
"ala_B_c":-1.0,
"amp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pant__R_c":-1.0,
"pnto__R_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05900",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PANTS"
]
},
"annotation":{
"bigg.reaction":[
"PANTS"
],
"biocyc":[
"META:PANTOATE-BETA-ALANINE-LIG-RXN"
],
"ec-code":[
"6.3.2.1"
],
"kegg.reaction":[
"R02473"
],
"metanetx.reaction":[
"MNXR102345"
],
"rhea":[
"10914",
"10913",
"10915",
"10912"
],
"sabiork":[
"2406"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01791"
]
}
},
{
"id":"AHCi",
"name":"Adenosylhomocysteinase",
"metabolites":{
"adn_c":1.0,
"ahcys_c":-1.0,
"h2o_c":-1.0,
"hcys__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03170",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"AHCi"
]
},
"annotation":{
"bigg.reaction":[
"AHCi"
],
"biocyc":[
"META:ADENOSYLHOMOCYSTEINASE-RXN"
],
"ec-code":[
"3.3.1.1"
],
"kegg.reaction":[
"R00192"
],
"metanetx.reaction":[
"MNXR95492"
],
"reactome.reaction":[
"R-RNO-174401",
"R-CFA-174401",
"R-OSA-174401",
"R-XTR-174401",
"R-SSC-174401",
"R-DME-174401",
"R-BTA-174401",
"R-GGA-174401",
"R-MMU-174401",
"R-TGU-174401",
"R-HSA-174401",
"R-ATH-174401",
"R-SCE-174401",
"R-DRE-174401",
"R-CEL-174401"
],
"rhea":[
"21708",
"21710",
"21711",
"21709"
],
"sabiork":[
"738",
"8119"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00141"
]
}
},
{
"id":"G6PDH2r",
"name":"Glucose 6-phosphate dehydrogenase",
"metabolites":{
"6pgl_c":1.0,
"g6p_c":-1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11865",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"G6PDH2r"
]
},
"annotation":{
"bigg.reaction":[
"G6PDH2r"
],
"biocyc":[
"META:GLU6PDEHYDROG-RXN"
],
"ec-code":[
"1.1.1.363",
"1.1.1.49"
],
"kegg.reaction":[
"R00835"
],
"metanetx.reaction":[
"MNXR99907"
],
"rhea":[
"15842",
"15843",
"15841",
"15844"
],
"sabiork":[
"1176",
"6509"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00604"
]
}
},
{
"id":"ALAD_L",
"name":"L-alanine dehydrogenase",
"metabolites":{
"ala__L_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"nh4_c":1.0,
"pyr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08945",
"subsystem":"Amino acid metabolism: Alanine, Aspartate and Glutamate metabolism",
"notes":{
"original_bigg_ids":[
"ALAD_L"
]
},
"annotation":{
"bigg.reaction":[
"ALAD_L"
],
"biocyc":[
"META:ALANINE-DEHYDROGENASE-RXN"
],
"ec-code":[
"1.4.1.1"
],
"kegg.reaction":[
"R00396"
],
"metanetx.reaction":[
"MNXR95687"
],
"rhea":[
"18405",
"18408",
"18406",
"18407"
],
"sabiork":[
"857"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00278"
]
}
},
{
"id":"GTPCII",
"name":"GTP cyclohydrolase II",
"metabolites":{
"25dhpp_c":1.0,
"for_c":1.0,
"gtp_c":-1.0,
"h2o_c":-3.0,
"h_c":2.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07325",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"GTPCII"
]
},
"annotation":{
"bigg.reaction":[
"GTPCII"
],
"metanetx.reaction":[
"MNXR100454"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLCBRAN3",
"name":"Glycogen branching enzyme",
"metabolites":{
"14glucan_c":-1.0,
"adp_c":1.0,
"adpglc_c":-1.0,
"glycogen_c":1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05570 or SYNPCC7942_RS09580",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"GLCBRAN3"
]
},
"annotation":{
"bigg.reaction":[
"GLCBRAN3"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DB4PS",
"name":"3,4-Dihydroxy-2-butanone-4-phosphate synthase",
"metabolites":{
"db4p_c":1.0,
"for_c":1.0,
"h_c":1.0,
"ru5p__D_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07325",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"DB4PS"
]
},
"annotation":{
"bigg.reaction":[
"DB4PS"
],
"ec-code":[
"4.1.99.12"
],
"kegg.reaction":[
"R07281"
],
"metanetx.reaction":[
"MNXR97178"
],
"sabiork":[
"9052"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05040"
]
}
},
{
"id":"DXPRIi",
"name":"1-deoxy-D-xylulose reductoisomerase",
"metabolites":{
"2me4p_c":1.0,
"dxyl5p_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07735",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"DXPRIi"
]
},
"annotation":{
"bigg.reaction":[
"DXPRIi"
],
"biocyc":[
"META:DXPREDISOM-RXN"
],
"ec-code":[
"1.1.1.267"
],
"kegg.reaction":[
"R05688"
],
"metanetx.reaction":[
"MNXR97830"
],
"rhea":[
"13720",
"13717",
"13718",
"13719"
],
"sabiork":[
"5284"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03958"
]
}
},
{
"id":"FBA3",
"name":"Sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase",
"metabolites":{
"dhap_c":1.0,
"e4p_c":1.0,
"s17bp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07385",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"FBA3"
]
},
"annotation":{
"bigg.reaction":[
"FBA3"
],
"biocyc":[
"META:SEDOBISALDOL-RXN"
],
"ec-code":[
"4.1.2.13",
"4.1.2"
],
"kegg.reaction":[
"R01829"
],
"metanetx.reaction":[
"MNXR99461"
],
"rhea":[
"30167",
"30170",
"30169",
"30168"
],
"sabiork":[
"45"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01334"
]
}
},
{
"id":"RBFSa",
"name":"Riboflavin synthase",
"metabolites":{
"4r5au_c":-1.0,
"db4p_c":-1.0,
"dmlz_c":1.0,
"h2o_c":2.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11395",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"RBFSa"
]
},
"annotation":{
"bigg.reaction":[
"RBFSa"
],
"ec-code":[
"2.5.1.9",
"2.5.1.78"
],
"kegg.reaction":[
"R04457"
],
"metanetx.reaction":[
"MNXR97501"
],
"sabiork":[
"8561"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03080"
]
}
},
{
"id":"GLUTRS",
"name":"Glutamyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"glu__L_c":-1.0,
"glutrna_c":1.0,
"ppi_c":1.0,
"trnaglu_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12160",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"GLUTRS"
]
},
"annotation":{
"bigg.reaction":[
"GLUTRS"
],
"ec-code":[
"6.1.1",
"6.1.1.17",
"6.1.1.24"
],
"kegg.reaction":[
"R05578"
],
"metanetx.reaction":[
"MNXR100295"
],
"reactome.reaction":[
"R-HSA-379861",
"R-HSA-380216"
],
"sabiork":[
"5179"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06937"
]
}
},
{
"id":"MPOMMM",
"name":"Magnesium-protoporphyrin-IX 13-monomethyl ester,NADPH oxygen oxidoreductase (hydroxylating)",
"metabolites":{
"h2o_c":2.0,
"h_c":-1.0,
"hmppp9_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0,
"omppp9_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09670",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"MPOMMM"
]
},
"annotation":{
"bigg.reaction":[
"MPOMMM"
],
"biocyc":[
"META:RXN-5283"
],
"ec-code":[
"1.14.13.81"
],
"kegg.reaction":[
"R06266"
],
"metanetx.reaction":[
"MNXR101719"
],
"rhea":[
"20544",
"20541",
"20542",
"20543"
],
"sbo":"SBO:0000176"
}
},
{
"id":"METAT",
"name":"Methionine adenosyltransferase",
"metabolites":{
"amet_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"met__L_c":-1.0,
"pi_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12520",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"METAT"
]
},
"annotation":{
"bigg.reaction":[
"METAT"
],
"biocyc":[
"META:S-ADENMETSYN-RXN"
],
"ec-code":[
"2.5.1.6"
],
"kegg.reaction":[
"R00177"
],
"metanetx.reaction":[
"MNXR101407"
],
"reactome.reaction":[
"R-RNO-174391",
"R-SPO-174391",
"R-SCE-174391",
"R-XTR-174391",
"R-ATH-5603114",
"R-MMU-174391",
"R-CFA-174391",
"R-OSA-174391",
"R-MMU-5603114",
"R-DRE-5603114",
"R-DDI-5603114",
"R-ATH-174391",
"R-GGA-174391",
"R-DME-174391",
"R-DRE-174391",
"R-HSA-174391",
"R-PFA-174391",
"R-BTA-5603114",
"R-SSC-5603114",
"R-HSA-5603114",
"R-BTA-174391",
"R-OSA-5603114",
"R-DDI-174391",
"R-RNO-5603114",
"R-TGU-174391",
"R-CFA-5603114",
"R-XTR-5603114",
"R-CEL-174391",
"R-SSC-174391"
],
"rhea":[
"21082",
"21081",
"21080",
"21083"
],
"sabiork":[
"96"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00126"
]
}
},
{
"id":"EAR160y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C16:0)",
"metabolites":{
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"palmACP_c":1.0,
"tpalm2eACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR160y"
]
},
"annotation":{
"bigg.reaction":[
"EAR160y"
],
"ec-code":[
"1.3.1.10"
],
"metanetx.reaction":[
"MNXR97856"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DHORTS",
"name":"Dihydroorotase",
"metabolites":{
"cbasp_c":1.0,
"dhor__S_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02485",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"DHORTS"
]
},
"annotation":{
"bigg.reaction":[
"DHORTS"
],
"biocyc":[
"META:DIHYDROOROT-RXN"
],
"ec-code":[
"3.5.2.3"
],
"kegg.reaction":[
"R01993"
],
"metanetx.reaction":[
"MNXR97428"
],
"reactome.reaction":[
"R-CFA-73571",
"R-BTA-73571",
"R-SCE-73571",
"R-MMU-73571",
"R-GGA-73571",
"R-CEL-73571",
"R-OSA-73571",
"R-SPO-73571",
"R-TGU-73571",
"R-SSC-73571",
"R-RNO-73571",
"R-GGA-419465",
"R-HSA-73571",
"R-DDI-73571",
"R-DRE-73571",
"R-XTR-73571",
"R-DME-73571",
"R-ATH-73571",
"R-PFA-73571"
],
"rhea":[
"24296",
"24298",
"24299",
"24297"
],
"sabiork":[
"399"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01465"
]
}
},
{
"id":"PDX5PS2",
"name":"Pyridoxine 5'-phosphate synthase",
"metabolites":{
"3a2oxpp_c":-1.0,
"dxyl5p_c":-1.0,
"h2o_c":2.0,
"h_c":1.0,
"pdx5p_c":1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06115",
"subsystem":"Cofactor biosynthesis: Vitamin B6",
"notes":{
"original_bigg_ids":[
"PDX5PS2"
]
},
"annotation":{
"bigg.reaction":[
"PDX5PS2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"KARI_23dhmp_1",
"name":"Ketol-acid reductoisomerase, (R)-2,3-Dihydroxy-3-methylpentanoate forming",
"metabolites":{
"23dhmp_c":1.0,
"3hmop_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07915",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"KARI_23dhmp"
]
},
"annotation":{
"bigg.reaction":[
"KARI_23dhmp_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ARGDC",
"name":"Arginine decarboxylase",
"metabolites":{
"agm_c":1.0,
"arg__L_c":-1.0,
"co2_c":1.0,
"h_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05325",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ARGDC"
]
},
"annotation":{
"bigg.reaction":[
"ARGDC"
],
"biocyc":[
"META:ARGDECARBOX-RXN"
],
"ec-code":[
"4.1.1.19"
],
"kegg.reaction":[
"R00566"
],
"metanetx.reaction":[
"MNXR95940"
],
"reactome.reaction":[
"R-SPO-350598",
"R-XTR-350598",
"R-CFA-350598",
"R-DDI-350598",
"R-GGA-350598",
"R-SSC-350598",
"R-PFA-350598",
"R-TGU-350598",
"R-MMU-350598",
"R-SCE-350598",
"R-OSA-350598",
"R-RNO-350598",
"R-BTA-350598",
"R-ATH-350598",
"R-HSA-350598",
"R-DME-350598",
"R-CEL-350598"
],
"rhea":[
"17641",
"17642",
"17644",
"17643"
],
"sabiork":[
"594"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00405"
]
}
},
{
"id":"GAPDi_nadp",
"name":"Glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating)",
"metabolites":{
"13dpg_c":-1.0,
"g3p_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08865",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"GAPDi_nadp"
]
},
"annotation":{
"bigg.reaction":[
"GAPDi_nadp"
],
"biocyc":[
"META:1.2.1.13-RXN"
],
"ec-code":[
"1.2.1.13",
"1.2.1.59"
],
"kegg.reaction":[
"R01063"
],
"metanetx.reaction":[
"MNXR100041"
],
"rhea":[
"10296",
"10298",
"10299",
"10297"
],
"sabiork":[
"7845"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00782"
]
}
},
{
"id":"NTD7",
"name":"5'-nucleotidase (AMP)",
"metabolites":{
"adn_c":1.0,
"amp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10465",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NTD7"
]
},
"annotation":{
"bigg.reaction":[
"NTD7"
],
"biocyc":[
"META:AMP-DEPHOSPHORYLATION-RXN"
],
"ec-code":[
"3.1.3.5"
],
"kegg.reaction":[
"R00183"
],
"metanetx.reaction":[
"MNXR102037"
],
"reactome.reaction":[
"R-CFA-109415",
"R-XTR-109415",
"R-GGA-109415",
"R-DRE-109415",
"R-BTA-109415",
"R-SSC-109415",
"R-HSA-109415",
"R-RNO-109415",
"R-TGU-109415",
"R-MMU-109415"
],
"rhea":[
"29376",
"29378",
"29375",
"29377"
],
"sabiork":[
"295"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00132"
]
}
},
{
"id":"AIRC3",
"name":"Phosphoribosylaminoimidazole carboxylase (mutase rxn)",
"metabolites":{
"5aizc_c":-1.0,
"5caiz_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02255",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"AIRC3"
]
},
"annotation":{
"bigg.reaction":[
"AIRC3"
],
"biocyc":[
"META:RXN0-743"
],
"ec-code":[
"5.4.99.18"
],
"kegg.reaction":[
"R07405"
],
"metanetx.reaction":[
"MNXR95645"
],
"rhea":[
"13194",
"13196",
"13195",
"13193"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05115"
]
}
},
{
"id":"UMPK",
"name":"UMP kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"udp_c":1.0,
"ump_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02570",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"UMPK"
]
},
"annotation":{
"bigg.reaction":[
"UMPK"
],
"biocyc":[
"META:RXN-12002"
],
"ec-code":[
"2.7.4.4",
"2.7.4.22",
"2.7.4.14"
],
"kegg.reaction":[
"R00158"
],
"metanetx.reaction":[
"MNXR105118"
],
"rhea":[
"24400",
"24402",
"24401",
"24403"
],
"sabiork":[
"201"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00119"
]
}
},
{
"id":"ASPOb",
"name":"L-aspartate oxidase (oxaloacetate forming)",
"metabolites":{
"h2o_c":-1.0,
"h_c":-1.0,
"iasp_c":-1.0,
"nh4_c":1.0,
"oaa_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09540",
"subsystem":"Amino acid metabolism: Alanine, Aspartate and Glutamate metabolism",
"notes":{
"original_bigg_ids":[
"ASPOb"
]
},
"annotation":{
"bigg.reaction":[
"ASPOb"
],
"sbo":"SBO:0000176"
}
},
{
"id":"RBFSb_1",
"name":"Riboflavin synthase",
"metabolites":{
"4r5au_c":1.0,
"dmlz_c":-2.0,
"h_c":1.0,
"ribflv_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08285",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"RBFSb"
]
},
"annotation":{
"bigg.reaction":[
"RBFSb_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SUCDum",
"name":"Succinate dehydrogenase (plastoquinone utilizing, thylakoid membrane localized)",
"metabolites":{
"fum_c":1.0,
"pq_um":-1.0,
"pqh2_um":1.0,
"succ_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01600 and SYNPCC7942_RS03290 and SYNPCC7942_RS07835",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"SUCDum"
]
},
"annotation":{
"bigg.reaction":[
"SUCDum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"FBP",
"name":"Fructose-bisphosphatase",
"metabolites":{
"f6p_c":1.0,
"fdp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02565 or SYNPCC7942_RS11870",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"FBP"
]
},
"annotation":{
"bigg.reaction":[
"FBP"
],
"ec-code":[
"3.1.3.11"
],
"metanetx.reaction":[
"MNXR99465"
],
"rhea":[
"11067",
"11065",
"11066",
"11064"
],
"sabiork":[
"2084"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CITCIb",
"name":"3-methylmalate hydratase",
"metabolites":{
"citac_c":-1.0,
"h2o_c":-1.0,
"r3mmal_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09625 and SYNPCC7942_RS12945",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"CITCIb"
]
},
"annotation":{
"bigg.reaction":[
"CITCIb"
],
"biocyc":[
"META:RXN-7744"
],
"ec-code":[
"4.2.1.35"
],
"kegg.reaction":[
"R03898"
],
"metanetx.reaction":[
"MNXR96730"
],
"rhea":[
"42424",
"42425",
"42426",
"42427"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02751"
]
}
},
{
"id":"MNabc_1",
"name":"Manganese Mn2 transport via ABC system periplasm ",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"mn2_c":1.0,
"mn2_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(SYNPCC7942_RS06730 and SYNPCC7942_RS06735 and SYNPCC7942_RS06740) or (SYNPCC7942_RS13075 and SYNPCC7942_RS13080 and SYNPCC7942_RS13085)",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"MNabc_1"
]
},
"annotation":{
"bigg.reaction":[
"MNabc_1"
],
"biocyc":[
"META:3.6.3.35-RXN"
],
"ec-code":[
"3.6.3.35"
],
"metanetx.reaction":[
"MNXR101680"
],
"rhea":[
"17365#1",
"17368#1",
"17366#1",
"17367#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05149"
]
}
},
{
"id":"TMPK",
"name":"Thiamine-phosphate kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"thmmp_c":-1.0,
"thmpp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13045",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"TMPK"
]
},
"annotation":{
"bigg.reaction":[
"TMPK"
],
"biocyc":[
"META:THI-P-KIN-RXN"
],
"ec-code":[
"2.7.4.16"
],
"kegg.reaction":[
"R00617"
],
"metanetx.reaction":[
"MNXR104907"
],
"rhea":[
"15913",
"15916",
"15915",
"15914"
],
"sabiork":[
"1007"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00438"
]
}
},
{
"id":"AGPR",
"name":"N-acetyl-g-glutamyl-phosphate reductase",
"metabolites":{
"acg5p_c":1.0,
"acg5sa_c":-1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"pi_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07330",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"AGPR"
]
},
"annotation":{
"bigg.reaction":[
"AGPR"
],
"biocyc":[
"META:N-ACETYLGLUTPREDUCT-RXN"
],
"ec-code":[
"1.2.1.38"
],
"kegg.reaction":[
"R03443"
],
"metanetx.reaction":[
"MNXR95530"
],
"rhea":[
"21590",
"21591",
"21588",
"21589"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02465"
]
}
},
{
"id":"IPMD",
"name":"3-isopropylmalate dehydrogenase",
"metabolites":{
"3c2hmp_c":-1.0,
"3c4mop_c":1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07690",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"IPMD"
]
},
"annotation":{
"bigg.reaction":[
"IPMD"
],
"biocyc":[
"META:3-ISOPROPYLMALDEHYDROG-RXN"
],
"ec-code":[
"1.1.1.85"
],
"kegg.reaction":[
"R04426"
],
"metanetx.reaction":[
"MNXR100878"
],
"rhea":[
"10894",
"10893",
"10895",
"10892"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03062"
]
}
},
{
"id":"CDPMEK",
"name":"4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase",
"metabolites":{
"2p4c2me_c":1.0,
"4c2me_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01580",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"CDPMEK"
]
},
"annotation":{
"bigg.reaction":[
"CDPMEK"
],
"biocyc":[
"META:2.7.1.148-RXN"
],
"ec-code":[
"2.7.1.148"
],
"kegg.reaction":[
"R05634"
],
"metanetx.reaction":[
"MNXR96558"
],
"rhea":[
"18437",
"18440",
"18438",
"18439"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03908"
]
}
},
{
"id":"DVOCHR_1",
"name":"Divinyl protochlorophyllide a 8-vinyl-reductase",
"metabolites":{
"dvpchlda_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pchlld_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06950",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"DVOCHR"
]
},
"annotation":{
"bigg.reaction":[
"DVOCHR_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"H2CO3_NAt_syn",
"name":"Bicarbonate transport (Na/HCO3 cotransport periplasme)",
"metabolites":{
"hco3_c":1.0,
"hco3_p":-1.0,
"na1_c":1.0,
"na1_p":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07540",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"H2CO3_NAt_syn"
]
},
"annotation":{
"bigg.reaction":[
"H2CO3_NAt_syn"
],
"metanetx.reaction":[
"MNXR100485"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn12800"
]
}
},
{
"id":"HEMEOS",
"name":"Heme O synthase",
"metabolites":{
"frdp_c":-1.0,
"h2o_c":-1.0,
"hemeO_c":1.0,
"pheme_c":-1.0,
"ppi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13245",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"HEMEOS"
]
},
"annotation":{
"bigg.reaction":[
"HEMEOS"
],
"ec-code":[
"2.5.1.-"
],
"kegg.reaction":[
"R07411"
],
"metanetx.reaction":[
"MNXR100596"
],
"reactome.reaction":[
"R-OSA-2995330",
"R-SPO-2995330",
"R-HSA-2995330",
"R-BTA-2995330",
"R-ATH-2995330",
"R-SSC-2995330",
"R-DDI-2995330",
"R-PFA-2995330",
"R-DRE-2995330",
"R-MMU-2995330",
"R-DME-2995330",
"R-RNO-2995330",
"R-TGU-2995330",
"R-SCE-2995330",
"R-XTR-2995330",
"R-CEL-2995330",
"R-GGA-2995330",
"R-CFA-2995330"
],
"rhea":[
"28073",
"28070",
"28071",
"28072"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PMANM",
"name":"Phosphomannomutase",
"metabolites":{
"man1p_c":-1.0,
"man6p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06495",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"MPPM"
]
},
"annotation":{
"bigg.reaction":[
"PMANM"
],
"biocyc":[
"META:PHOSMANMUT-RXN"
],
"ec-code":[
"5.4.2.8"
],
"kegg.reaction":[
"R01818"
],
"metanetx.reaction":[
"MNXR101729"
],
"reactome.reaction":[
"R-MMU-446201",
"R-SPO-446201",
"R-SSC-446201",
"R-RNO-446201",
"R-DDI-446201",
"R-SCE-446201",
"R-GGA-446201",
"R-OSA-446201",
"R-ATH-446201",
"R-DME-446201",
"R-PFA-446201",
"R-TGU-446201",
"R-XTR-446201",
"R-BTA-446201",
"R-CEL-446201",
"R-HSA-446201",
"R-CFA-446201",
"R-DRE-446201"
],
"rhea":[
"11141",
"11143",
"11142",
"11140"
],
"sabiork":[
"69"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01329"
]
}
},
{
"id":"RPE",
"name":"Ribulose 5-phosphate 3-epimerase",
"metabolites":{
"ru5p__D_c":-1.0,
"xu5p__D_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03100",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"RPE"
]
},
"annotation":{
"bigg.reaction":[
"RPE"
],
"biocyc":[
"META:RIBULP3EPIM-RXN"
],
"ec-code":[
"5.1.3.1"
],
"kegg.reaction":[
"R01529"
],
"metanetx.reaction":[
"MNXR104083"
],
"reactome.reaction":[
"R-SPO-71303",
"R-CFA-199803",
"R-ATH-71303",
"R-SCE-71303",
"R-CFA-71303",
"R-DME-199803",
"R-XTR-199803",
"R-SSC-199803",
"R-GGA-199803",
"R-TGU-71303",
"R-OSA-199803",
"R-SSC-71303",
"R-MMU-71303",
"R-OSA-71303",
"R-HSA-71303",
"R-MMU-199803",
"R-XTR-71303",
"R-SPO-199803",
"R-SCE-199803",
"R-DDI-71303",
"R-RNO-71303",
"R-DME-71303",
"R-HSA-199803",
"R-DRE-71303",
"R-PFA-199803",
"R-CEL-199803",
"R-RNO-199803",
"R-PFA-71303",
"R-CEL-71303",
"R-TGU-199803",
"R-GGA-71303",
"R-DDI-199803",
"R-BTA-71303",
"R-ATH-199803",
"R-DRE-199803",
"R-BTA-199803"
],
"rhea":[
"13677",
"13680",
"13678",
"13679"
],
"sabiork":[
"62"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01116"
]
}
},
{
"id":"MPOMT_1",
"name":"S-adenosyl-L-methionine magnesium-protoporphyrin-IX O-methyltransferase",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"mppp9_c":-1.0,
"mppp9me_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02245",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"MPOMT"
]
},
"annotation":{
"bigg.reaction":[
"MPOMT_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CPPPGO2",
"name":"Oxygen Independent coproporphyrinogen-III oxidase",
"metabolites":{
"amet_c":-2.0,
"co2_c":2.0,
"cpppg3_c":-1.0,
"dad_5_c":2.0,
"met__L_c":2.0,
"pppg9_c":1.0
},
"lower_bound":0.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS12105",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"CPPPGO2"
]
},
"annotation":{
"bigg.reaction":[
"CPPPGO2"
],
"biocyc":[
"META:HEMN-RXN"
],
"ec-code":[
"1.3.98.3",
"1.3.99.22"
],
"kegg.reaction":[
"R06895"
],
"metanetx.reaction":[
"MNXR96881"
],
"rhea":[
"15425",
"15427",
"15428",
"15426"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04704"
]
}
},
{
"id":"PC17M_1",
"name":"Precorrin-3B  methyltransferase",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"h_c":2.0,
"pre3b_c":-1.0,
"pre4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09405",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PC17M"
]
},
"annotation":{
"bigg.reaction":[
"PC17M_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UAMAS",
"name":"UDP-N-acetylmuramoyl-L-alanine synthetase",
"metabolites":{
"adp_c":1.0,
"ala__L_c":-1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"uama_c":1.0,
"uamr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08860",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UAMAS"
]
},
"annotation":{
"bigg.reaction":[
"UAMAS"
],
"biocyc":[
"META:UDP-NACMUR-ALA-LIG-RXN"
],
"ec-code":[
"6.3.2.8"
],
"kegg.reaction":[
"R03193"
],
"metanetx.reaction":[
"MNXR141024"
],
"rhea":[
"23372",
"23374",
"23373",
"23375"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11251",
"rxn02286"
]
}
},
{
"id":"GLUCYS",
"name":"Gamma-glutamylcysteine synthetase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cys__L_c":-1.0,
"glu__L_c":-1.0,
"glucys_c":1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11455",
"subsystem":"Metabolism of other amino acids: Glutathione metabolism",
"notes":{
"original_bigg_ids":[
"GLUCYS"
]
},
"annotation":{
"bigg.reaction":[
"GLUCYS"
],
"biocyc":[
"META:GLUTCYSLIG-RXN"
],
"ec-code":[
"6.3.2.2"
],
"kegg.reaction":[
"R00894"
],
"metanetx.reaction":[
"MNXR100074"
],
"reactome.reaction":[
"R-XTR-174367",
"R-RNO-174367",
"R-HSA-174367",
"R-SSC-174367",
"R-CEL-174367",
"R-SPO-174367",
"R-MMU-174367",
"R-DME-174367",
"R-CFA-174367",
"R-TGU-174367",
"R-DRE-174367",
"R-BTA-174367"
],
"rhea":[
"13285",
"13287",
"13286",
"13288"
],
"sabiork":[
"1217"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00646"
]
}
},
{
"id":"NDHPQRum",
"name":"NADH:plastoquinone reductase (non-electrogenic)",
"metabolites":{
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"pq_um":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01005 or SYNPCC7942_RS00515",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NDHPQRum"
]
},
"annotation":{
"bigg.reaction":[
"NDHPQRum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"CYNL",
"name":"Cyanate lyase",
"metabolites":{
"cbm_c":1.0,
"co2_c":1.0,
"cynt_c":-1.0,
"h_c":-1.0,
"hco3_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10665",
"subsystem":"Nitrogen metabolism",
"notes":{
"original_bigg_ids":[
"CYNL"
]
},
"annotation":{
"bigg.reaction":[
"CYNL"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DCTPD2",
"name":"DCTP deaminase",
"metabolites":{
"ctp_c":-1.0,
"h2o_c":-1.0,
"h_c":-1.0,
"nh4_c":1.0,
"utp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09635",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"DCTPD2"
]
},
"annotation":{
"bigg.reaction":[
"DCTPD2"
],
"biocyc":[
"META:RXN-14118"
],
"ec-code":[
"3.5.4.13"
],
"kegg.reaction":[
"R00568"
],
"metanetx.reaction":[
"MNXR97202"
],
"rhea":[
"30337",
"30336",
"30338",
"30335"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00407"
]
}
},
{
"id":"CYOOum",
"name":"Cytochrome aa3 oxidase (plastocyanin utilizing, H+/e-:  0.9)",
"metabolites":{
"h2o_c":2.0,
"h_c":-7.6,
"h_u":3.6,
"o2_c":-1.0,
"pcox_u":4.0,
"pcrd_u":-4.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13255 and SYNPCC7942_RS13260 and SYNPCC7942_RS13265",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"CYOOum"
]
},
"annotation":{
"bigg.reaction":[
"CYOOum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"BPNT2",
"name":"3'-Phospho-5'-adenylyl sulfate 3'-phosphohydrolase",
"metabolites":{
"aps_c":1.0,
"h2o_c":-1.0,
"paps_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00880 or SYNPCC7942_RS04960",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"BPNT2"
]
},
"annotation":{
"bigg.reaction":[
"BPNT2"
],
"biocyc":[
"META:R163-RXN"
],
"ec-code":[
"3.1.3.7"
],
"kegg.reaction":[
"R00508"
],
"metanetx.reaction":[
"MNXR96322"
],
"reactome.reaction":[
"R-MTU-936659"
],
"sabiork":[
"937"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00360"
]
}
},
{
"id":"METS_1",
"name":"Methionine synthase",
"metabolites":{
"5mthf_c":-1.0,
"hcys__L_c":-1.0,
"met__L_c":1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07020",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"METS"
]
},
"annotation":{
"bigg.reaction":[
"METS_1"
],
"ec-code":[
"2.1.1.13"
],
"kegg.reaction":[
"R00946"
],
"metanetx.reaction":[
"MNXR101481"
],
"rhea":[
"11173",
"11175",
"11174",
"11172"
],
"sabiork":[
"1260"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PRUK",
"name":"Phosphoribulokinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"rb15bp_c":1.0,
"ru5p__D_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05015",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"PRUK"
]
},
"annotation":{
"bigg.reaction":[
"PRUK"
],
"biocyc":[
"META:PHOSPHORIBULOKINASE-RXN"
],
"ec-code":[
"2.7.1.19"
],
"kegg.reaction":[
"R01523"
],
"metanetx.reaction":[
"MNXR103217"
],
"rhea":[
"19365",
"19367",
"19368",
"19366"
],
"sabiork":[
"1692"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01111"
]
}
},
{
"id":"FNOR_1",
"name":"Ferredoxin:NADPH oxidoreductase",
"metabolites":{
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h_c":-1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05020",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"FNOR"
]
},
"annotation":{
"bigg.reaction":[
"FNOR_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GART",
"name":"GAR transformylase-T",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"fgam_c":1.0,
"for_c":-1.0,
"gar_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03015",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"GART"
]
},
"annotation":{
"bigg.reaction":[
"GART"
],
"biocyc":[
"META:GARTRANSFORMYL2-RXN"
],
"ec-code":[
"2.1.2.-",
"2.1.2"
],
"kegg.reaction":[
"R06974"
],
"metanetx.reaction":[
"MNXR100042"
],
"rhea":[
"24830",
"24832",
"24831",
"24829"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04783"
]
}
},
{
"id":"IPPMIb",
"name":"2-isopropylmalate hydratase",
"metabolites":{
"2ippm_c":-1.0,
"3c3hmp_c":1.0,
"h2o_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS09625 and SYNPCC7942_RS12945",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"IMDHT"
]
},
"annotation":{
"bigg.reaction":[
"IPPMIb"
],
"biocyc":[
"META:3-ISOPROPYLMALISOM-RXN"
],
"ec-code":[
"4.2.1.33"
],
"kegg.reaction":[
"R03968"
],
"metanetx.reaction":[
"MNXR100826"
],
"rhea":[
"16293",
"16295",
"16296",
"16294"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02789"
]
}
},
{
"id":"DMTPHT",
"name":"Demethylphylloquinone methyltransferase",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"dmtphllqne_c":-1.0,
"h_c":1.0,
"phllqne_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05635",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"AMPQT"
]
},
"annotation":{
"bigg.reaction":[
"DMTPHT"
],
"ec-code":[
"2.1.1.163"
],
"kegg.reaction":[
"R06859"
],
"metanetx.reaction":[
"MNXR97536"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04674"
]
}
},
{
"id":"PC6YM_1",
"name":"Precorrin-6B  methyltransferase",
"metabolites":{
"ahcys_c":2.0,
"amet_c":-2.0,
"co2_c":1.0,
"h_c":3.0,
"pre6b_c":-1.0,
"pre8_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09385",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PC6YM"
]
},
"annotation":{
"bigg.reaction":[
"PC6YM_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PGL",
"name":"6-phosphogluconolactonase",
"metabolites":{
"6pgc_c":1.0,
"6pgl_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02690",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"PGL"
]
},
"annotation":{
"bigg.reaction":[
"PGL"
],
"biocyc":[
"META:6PGLUCONOLACT-RXN"
],
"ec-code":[
"3.1.1.31"
],
"kegg.reaction":[
"R02035"
],
"metanetx.reaction":[
"MNXR102539"
],
"reactome.reaction":[
"R-OSA-71296",
"R-CFA-71296",
"R-CEL-71296",
"R-GGA-71296",
"R-MMU-71296",
"R-SSC-71296",
"R-BTA-71296",
"R-ATH-71296",
"R-DME-71296",
"R-DRE-71296",
"R-SCE-71296",
"R-HSA-71296",
"R-XTR-71296",
"R-RNO-71296",
"R-DDI-71296",
"R-SPO-71296"
],
"rhea":[
"12559",
"12556",
"12557",
"12558"
],
"sabiork":[
"109"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01476"
]
}
},
{
"id":"DDPA",
"name":"3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase",
"metabolites":{
"2dda7p_c":1.0,
"e4p_c":-1.0,
"h2o_c":-1.0,
"pep_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12690",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"DDPA"
]
},
"annotation":{
"bigg.reaction":[
"DDPA"
],
"biocyc":[
"META:DAHPSYN-RXN"
],
"ec-code":[
"2.5.1.54"
],
"kegg.reaction":[
"R01826"
],
"metanetx.reaction":[
"MNXR97218"
],
"reactome.reaction":[
"R-MTU-964912"
],
"rhea":[
"14718",
"14719",
"14717",
"14720"
],
"sabiork":[
"1910"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01332"
]
}
},
{
"id":"ASPCT",
"name":"Aspartate carbamoyltransferase",
"metabolites":{
"asp__L_c":-1.0,
"cbasp_c":1.0,
"cbp_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02475 and SYNPCC7942_RS03430",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"ASPCT"
]
},
"annotation":{
"bigg.reaction":[
"ASPCT"
],
"biocyc":[
"META:ASPCARBTRANS-RXN"
],
"ec-code":[
"2.1.3.2"
],
"kegg.reaction":[
"R01397"
],
"metanetx.reaction":[
"MNXR96080"
],
"reactome.reaction":[
"R-DDI-73573",
"R-RNO-73573",
"R-SPO-73573",
"R-DRE-73573",
"R-DME-73573",
"R-SCE-73573",
"R-CEL-73573",
"R-GGA-73573",
"R-SSC-73573",
"R-CFA-73573",
"R-ATH-73573",
"R-GGA-419451",
"R-MMU-73573",
"R-PFA-73573",
"R-BTA-73573",
"R-OSA-73573",
"R-HSA-73573",
"R-TGU-73573",
"R-XTR-73573"
],
"rhea":[
"20015",
"20014",
"20016",
"20013"
],
"sabiork":[
"398"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01018"
]
}
},
{
"id":"HSERTA",
"name":"Homoserine O trans acetylase",
"metabolites":{
"accoa_c":-1.0,
"achms_c":1.0,
"coa_c":1.0,
"hom__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08720 or SYNPCC7942_RS01890",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"HSERTA"
]
},
"annotation":{
"bigg.reaction":[
"HSERTA"
],
"biocyc":[
"META:HOMOSERINE-O-ACETYLTRANSFERASE-RXN"
],
"ec-code":[
"2.3.1.31"
],
"kegg.reaction":[
"R01776"
],
"metanetx.reaction":[
"MNXR100736"
],
"rhea":[
"13701",
"13703",
"13704",
"13702"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01303"
]
}
},
{
"id":"OMCDC",
"name":"2-Oxo-4-methyl-3-carboxypentanoate decarboxylation",
"metabolites":{
"3c4mop_c":-1.0,
"4mop_c":1.0,
"co2_c":1.0,
"h_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"OMCDC"
]
},
"annotation":{
"bigg.reaction":[
"OMCDC"
],
"biocyc":[
"META:RXN-7800"
],
"ec-code":[
"1.1.1.85"
],
"kegg.reaction":[
"R01652"
],
"metanetx.reaction":[
"MNXR102180"
],
"rhea":[
"25078",
"25080",
"25081",
"25079"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01208"
]
}
},
{
"id":"CYRDAAT",
"name":"Cob(I)yrinic acid a,c-diamide adenosyltransferase",
"metabolites":{
"adcobdam_c":1.0,
"atp_c":-1.0,
"co1dam_c":-1.0,
"h_c":-1.0,
"pppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04920 or SYNPCC7942_RS05500 or SYNPCC7942_RS07095",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"CYRDAAT"
]
},
"annotation":{
"bigg.reaction":[
"CYRDAAT"
],
"ec-code":[
"2.5.1.17"
],
"metanetx.reaction":[
"MNXR96982"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MECDPDHf",
"name":"2-C-methyl-D-erythritol 2,4 cyclodiphosphate dehydratase (ferredoxin utilizing)",
"metabolites":{
"2mecdp_c":-1.0,
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h2mb4p_c":1.0,
"h2o_c":1.0,
"h_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03655",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"MECDPDHf"
]
},
"annotation":{
"bigg.reaction":[
"MECDPDHf"
],
"sbo":"SBO:0000176"
}
},
{
"id":"Htcx",
"name":"Proton transport to carboxysome via diffusion",
"metabolites":{
"h_c":-1.0,
"h_cx":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: carboxyzome",
"notes":{
"original_bigg_ids":[
"Htcx"
]
},
"annotation":{
"bigg.reaction":[
"Htcx"
],
"sbo":"SBO:0000185"
}
},
{
"id":"H2Otpp",
"name":"H2O transport via diffusion (periplasm)",
"metabolites":{
"h2o_c":1.0,
"h2o_p":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"H2Otpp"
]
},
"annotation":{
"bigg.reaction":[
"H2Otpp"
],
"biocyc":[
"META:TRANS-RXN-145",
"META:TRANS-RXN0-547"
],
"metanetx.reaction":[
"MNXR98641"
],
"reactome.reaction":[
"R-ATH-507868",
"R-CFA-432054",
"R-CFA-432010",
"R-RNO-507868",
"R-OSA-432065",
"R-GGA-432010",
"R-SPO-445714",
"R-PFA-445714",
"R-CFA-432065",
"R-GGA-432067",
"R-TGU-432054",
"R-TGU-445714",
"R-OSA-507868",
"R-DRE-507868",
"R-SPO-507868",
"R-BTA-432054",
"R-GGA-507870",
"R-OSA-432010",
"R-DME-432065",
"R-DRE-432067",
"R-PFA-507868",
"R-SSC-432054",
"R-HSA-432065",
"R-OSA-507870",
"R-HSA-432054",
"R-SSC-432065",
"R-CEL-507868",
"R-XTR-507868",
"R-ATH-507870",
"R-SCE-432065",
"R-BTA-507870",
"R-DME-432010",
"R-CFA-445714",
"R-DRE-445714",
"R-BTA-507868",
"R-GGA-507868",
"R-RNO-432054",
"R-RNO-432010",
"R-SSC-432067",
"R-CEL-445714",
"R-DDI-432065",
"R-ATH-432010",
"R-SCE-432054",
"R-MMU-432065",
"R-MMU-445714",
"R-GGA-432065",
"R-HSA-432067",
"R-SSC-507870",
"R-SCE-432067",
"R-RNO-507870",
"R-DME-432054",
"R-ATH-432067",
"R-BTA-445714",
"R-DRE-507870",
"R-DME-507868",
"R-DME-507870",
"R-DRE-432010",
"R-MMU-432010",
"R-HSA-445714",
"R-OSA-432054",
"R-RNO-432067",
"R-TGU-432010",
"R-TGU-507868",
"R-DDI-432054",
"R-PFA-507870",
"R-HSA-507870",
"R-XTR-432067",
"R-HSA-432010",
"R-SSC-507868",
"R-SCE-507870",
"R-CEL-507870",
"R-DDI-507868",
"R-DRE-432054",
"R-XTR-507870",
"R-DDI-432010",
"R-BTA-432065",
"R-CFA-432067",
"R-OSA-432067",
"R-ATH-432065",
"R-GGA-445714",
"R-SCE-507868",
"R-TGU-432065",
"R-MMU-432067",
"R-TGU-507870",
"R-CFA-507870",
"R-RNO-432065",
"R-MMU-432054",
"R-MMU-507868",
"R-SPO-507870",
"R-SCE-432010",
"R-MMU-507870",
"R-SSC-445714",
"R-HSA-507868",
"R-DME-432067",
"R-SSC-432010",
"R-TGU-432067",
"R-GGA-432054",
"R-BTA-432010",
"R-SCE-445714",
"R-DDI-507870",
"R-ATH-432054",
"R-DDI-432067",
"R-XTR-445714",
"R-BTA-432067",
"R-CFA-507868",
"R-RNO-445714"
],
"rhea":[
"29668",
"29669",
"29667",
"29670"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08687",
"rxn08686",
"rxn09745",
"rxn09838",
"rxn09874",
"rxn09812",
"rxn09643",
"rxn05319"
]
}
},
{
"id":"HISTP",
"name":"Histidinol-phosphatase",
"metabolites":{
"h2o_c":-1.0,
"hisp_c":-1.0,
"histd_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"HISTP"
]
},
"annotation":{
"bigg.reaction":[
"HISTP"
],
"biocyc":[
"META:HISTIDPHOS-RXN"
],
"ec-code":[
"3.1.3.15"
],
"kegg.reaction":[
"R03013"
],
"metanetx.reaction":[
"MNXR100642"
],
"rhea":[
"14466",
"14467",
"14468",
"14465"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02160"
]
}
},
{
"id":"MTHFR3_1",
"name":"5, 10 methylenetetrahydrofolate reductase NADPH ",
"metabolites":{
"5mthf_c":1.0,
"h_c":-1.0,
"mlthf_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06695",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"MTHFR3_1"
]
},
"annotation":{
"bigg.reaction":[
"MTHFR3_1"
],
"ec-code":[
"1.5.1.20"
],
"kegg.reaction":[
"R01224"
],
"metanetx.reaction":[
"MNXR101752"
],
"rhea":[
"19817",
"19818",
"19820",
"19819"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_ca2_e",
"name":"Calcium exchange",
"metabolites":{
"ca2_e":-1.0
},
"lower_bound":-0.024,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_ca2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_ca2_e"
],
"biocyc":[
"META:TRANS-RXN0-497",
"META:TRANS-RXN-144"
],
"ec-code":[
"3.6.3.8"
],
"metanetx.reaction":[
"MNXR96436"
],
"reactome.reaction":[
"R-HSA-210420",
"R-GGA-139855",
"R-HSA-432164",
"R-HSA-8863009",
"R-DME-2089943",
"R-CEL-2089943",
"R-CFA-3295579",
"R-TGU-5577213",
"R-SSC-2685505",
"R-RNO-210420",
"R-RNO-418309",
"R-TGU-5263618",
"R-DME-139854",
"R-SCE-418309",
"R-SSC-2534359",
"R-SSC-5263618",
"R-DRE-5263618",
"R-GGA-265645",
"R-RNO-3295579",
"R-ATH-2685505",
"R-TGU-265645",
"R-XTR-5263618",
"R-XTR-139854",
"R-XTR-418309",
"R-MMU-5263618",
"R-TGU-139854",
"R-GGA-418309",
"R-SSC-139854",
"R-CFA-418309",
"R-CEL-432164",
"R-SSC-2855020",
"R-DME-432164",
"R-DRE-139855",
"R-CEL-3295579",
"R-CFA-2089943",
"R-CFA-265645",
"R-GGA-432164",
"R-RNO-432164",
"R-MMU-2089943",
"R-GGA-2855020",
"R-CFA-2534359",
"R-RNO-182097",
"R-SSC-139855",
"R-CEL-139854",
"R-DRE-432164",
"R-SSC-418309",
"R-RNO-139854",
"R-DME-3295579",
"R-TGU-3295579",
"R-HSA-5263618",
"R-DDI-2685505",
"R-HSA-2534359",
"R-TGU-139855",
"R-XTR-5577213",
"R-CFA-5577213",
"R-DDI-3295579",
"R-HSA-2685505",
"R-XTR-210420",
"R-HSA-3295579",
"R-HSA-2855020",
"R-GGA-210420",
"R-DRE-2089943",
"R-CFA-2855020",
"R-RNO-139855",
"R-DME-418309",
"R-MMU-432164",
"R-BTA-139855",
"R-HSA-139854",
"R-DDI-418309",
"R-HSA-5577213",
"R-GGA-2089943",
"R-BTA-139854",
"R-CFA-2685505",
"R-MMU-2855020",
"R-HSA-418309",
"R-BTA-5577213",
"R-HSA-434798",
"R-XTR-2089943",
"R-BTA-2685505",
"R-MMU-418309",
"R-SSC-210420",
"R-HSA-169683",
"R-SSC-2089943",
"R-DRE-5577213",
"R-ATH-418309",
"R-RNO-2089943",
"R-RNO-265645",
"R-BTA-2855020",
"R-XTR-3295579",
"R-MMU-2685505",
"R-MMU-265645",
"R-CFA-139855",
"R-TGU-2685505",
"R-CFA-139854",
"R-CEL-418309",
"R-GGA-2685505",
"R-GGA-139854",
"R-XTR-2855020",
"R-BTA-265645",
"R-RNO-5263618",
"R-SSC-3295579",
"R-HSA-2089943",
"R-TGU-2855020",
"R-BTA-418309",
"R-DRE-139854",
"R-DRE-265645",
"R-GGA-3295579",
"R-XTR-2685505",
"R-BTA-2089943",
"R-MMU-210420",
"R-XTR-139855",
"R-SSC-265645",
"R-CFA-210420",
"R-XTR-265645",
"R-DME-434802",
"R-TGU-418309",
"R-MMU-3295579",
"R-RNO-2855020",
"R-SSC-5577213",
"R-OSA-2685505",
"R-HSA-4420052",
"R-DRE-2855020",
"R-BTA-5263618",
"R-GGA-5263618",
"R-CEL-5263618",
"R-RNO-2685505",
"R-GGA-5577213",
"R-BTA-210420",
"R-DRE-3295579",
"R-HSA-139855",
"R-DRE-210420",
"R-DRE-2685505",
"R-RNO-2534359",
"R-TGU-2089943",
"R-CFA-5263618",
"R-MMU-2534359",
"R-TGU-432164",
"R-BTA-2534359",
"R-MMU-139855",
"R-MMU-5577213",
"R-CFA-432164",
"R-XTR-432164",
"R-CEL-265645",
"R-SPO-418309",
"R-RNO-5577213",
"R-HSA-265645",
"R-OSA-418309",
"R-DRE-418309",
"R-BTA-3295579",
"R-TGU-210420",
"R-MMU-139854",
"R-SSC-432164",
"R-BTA-432164",
"R-DME-5263618"
],
"rhea":[
"29671",
"29674",
"29673",
"29672"
],
"sabiork":[
"12376"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08186"
]
}
},
{
"id":"3HAD40_2",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C4:0)",
"metabolites":{
"3hbutACP_c":-1.0,
"but2eACP_c":1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD40_1"
]
},
"annotation":{
"bigg.reaction":[
"3HAD40_2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ZCAROTDH1",
"name":"Zeta-carotene desaturase",
"metabolites":{
"h2o_c":2.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"neuspn_c":1.0,
"o2_c":-1.0,
"zcarote_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07730",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"ZDS"
]
},
"annotation":{
"bigg.reaction":[
"ZCAROTDH1"
],
"metanetx.reaction":[
"MNXR105274"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CYRDAR",
"name":"Cob(II)yrinic acid a,c-diamide reductase",
"metabolites":{
"co1dam_c":2.0,
"co2dam_c":-2.0,
"h_c":1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"CYRDAR"
]
},
"annotation":{
"bigg.reaction":[
"CYRDAR"
],
"metanetx.reaction":[
"MNXR96983"
],
"sbo":"SBO:0000176"
}
},
{
"id":"BIOMASS_MEM_LIPIDS",
"name":"BioLip",
"metabolites":{
"bm_memlip_c":1.0,
"dgdg1619Z160_c":-0.06332548303,
"dgdg161_c":-0.04039013237,
"dgdg1819Z160Z_c":-0.04396080608,
"dgdg1819Z1619Z_c":-0.02102545542,
"mgdg1619Z160_c":-0.2673176249,
"mgdg161_c":-0.1992320953,
"mgdg1819Z160_c":-0.1720707022,
"mgdg1819Z1619Z_c":-0.1039851725,
"pg1819Z160_c":-0.2726231733,
"sqdg160_c":-0.07211355618,
"sqdg1619Z160_c":-0.0482903278
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_MEM_LIPIDS"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_MEM_LIPIDS"
],
"sbo":"SBO:0000629"
}
},
{
"id":"HCO3tcx",
"name":"Bicarbonate transport to carboxyzome",
"metabolites":{
"hco3_c":-1.0,
"hco3_cx":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: carboxyzome",
"notes":{
"original_bigg_ids":[
"HCO3tcx"
]
},
"annotation":{
"bigg.reaction":[
"HCO3tcx"
],
"sbo":"SBO:0000185"
}
},
{
"id":"GLYALDDy",
"name":"Alcohol dehydrogenase (glycerol/NADPH utilizing)",
"metabolites":{
"glyald_c":-1.0,
"glyc__R_c":1.0,
"h2o_c":-1.0,
"h_c":2.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02490",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"GLYALDDy"
]
},
"annotation":{
"bigg.reaction":[
"GLYALDDy"
],
"sbo":"SBO:0000176"
}
},
{
"id":"IMPC",
"name":"IMP cyclohydrolase",
"metabolites":{
"fprica_c":1.0,
"h2o_c":-1.0,
"imp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02020",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"IMPC"
]
},
"annotation":{
"bigg.reaction":[
"IMPC"
],
"biocyc":[
"META:IMPCYCLOHYDROLASE-RXN"
],
"ec-code":[
"2.1.2.3",
"3.5.4.10"
],
"kegg.reaction":[
"R01127"
],
"metanetx.reaction":[
"MNXR100783"
],
"reactome.reaction":[
"R-SCE-73797",
"R-TGU-73797",
"R-GGA-419253",
"R-OSA-73797",
"R-GGA-73797",
"R-XTR-73797",
"R-RNO-73797",
"R-DDI-73797",
"R-SPO-73797",
"R-HSA-73797",
"R-BTA-73797",
"R-CFA-73797",
"R-MMU-73797",
"R-SSC-73797",
"R-ATH-73797",
"R-DME-73797",
"R-DRE-73797"
],
"rhea":[
"18446",
"18445",
"18447",
"18448"
],
"sabiork":[
"123"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00832"
]
}
},
{
"id":"BIOMASS_PROTEIN",
"name":"Biomass: protein",
"metabolites":{
"adp_c":9.0199,
"alatrna_c":-0.7662,
"argtrna_c":-0.4548,
"asntrna_c":-0.3658,
"asptrna_c":-0.4539,
"atp_c":-9.0199,
"bm_pro_c":1.0,
"cystrna_c":-0.0899,
"gdp_c":18.0398,
"glntrna_c":-0.502,
"glutrna_c":-0.5465,
"glytrna_c":-0.6663,
"gtp_c":-18.0398,
"h2o_c":-27.0597,
"h_c":36.0797,
"histrna_c":-0.1679,
"iletrna_c":-0.5665,
"leutrna_c":-1.0294,
"lystrna_c":-0.3777,
"mettrna_c":-0.177,
"phetrna_c":-0.3622,
"pi_c":27.0597,
"protrna_c":-0.463,
"sertrna_c":-0.5238,
"thrtrna_c":-0.4957,
"trnaala_c":0.7662,
"trnaarg_c":0.4548,
"trnaasn_c":0.3658,
"trnaasp_c":0.4539,
"trnacys_c":0.0899,
"trnagln_c":0.502,
"trnaglu_c":0.5465,
"trnagly_c":0.6663,
"trnahis_c":0.1679,
"trnaile_c":0.5665,
"trnaleu_c":1.0294,
"trnalys_c":0.3777,
"trnamet_c":0.177,
"trnaphe_c":0.3622,
"trnapro_c":0.463,
"trnaser_c":0.5238,
"trnathr_c":0.4957,
"trnatrp_c":0.1398,
"trnatyr_c":0.2633,
"trnaval_c":0.6082,
"trptrna_c":-0.1398,
"tyrtrna_c":-0.2633,
"valtrna_c":-0.6082
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_PROTEIN"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_PROTEIN"
],
"sbo":"SBO:0000629"
}
},
{
"id":"LDAPAT",
"name":"LL-diaminopimelate aminotransferase",
"metabolites":{
"26dap_LL_c":-1.0,
"akg_c":-1.0,
"glu__L_c":1.0,
"h2o_c":1.0,
"h_c":1.0,
"thdp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS04400",
"subsystem":"Amino acid metabolism: Lysine biosynthesis",
"notes":{
"original_bigg_ids":[
"DAPNH4T"
]
},
"annotation":{
"bigg.reaction":[
"LDAPAT"
],
"biocyc":[
"META:RXN-7737"
],
"ec-code":[
"2.6.1.83"
],
"kegg.reaction":[
"R07613"
],
"metanetx.reaction":[
"MNXR97144"
],
"rhea":[
"23991",
"23990",
"23989",
"23988"
],
"sabiork":[
"12290"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07441"
]
}
},
{
"id":"EX_nh4_e",
"name":"Ammonia exchange",
"metabolites":{
"nh4_e":-1.0
},
"lower_bound":-0.0031,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_nh4_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_nh4_e"
],
"biocyc":[
"META:TRANS-RXN0-206",
"META:RXN-9615",
"META:TRANS-RXN0-544"
],
"metanetx.reaction":[
"MNXR101950"
],
"reactome.reaction":[
"R-CEL-444416",
"R-SSC-444416",
"R-DDI-444416",
"R-MMU-444416",
"R-DRE-444416",
"R-GGA-444416",
"R-CFA-444416",
"R-HSA-444416",
"R-XTR-444416",
"R-BTA-444416",
"R-RNO-444416",
"R-TGU-444416",
"R-DME-444416"
],
"rhea":[
"28749",
"28748",
"28750",
"28747"
],
"sabiork":[
"11683"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn13364",
"rxn09835",
"rxn05466",
"rxn08987",
"rxn08986",
"rxn09736"
]
}
},
{
"id":"3OAR40_2",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C4:0)",
"metabolites":{
"3hbutACP_c":-1.0,
"actACP_c":1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR40_1"
]
},
"annotation":{
"bigg.reaction":[
"3OAR40_2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"RNDR2",
"name":"Ribonucleoside-diphosphate reductase (GDP)",
"metabolites":{
"dgdp_c":1.0,
"gdp_c":-1.0,
"h2o_c":1.0,
"trdox_c":1.0,
"trdrd_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08210",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"RNDR2"
]
},
"annotation":{
"bigg.reaction":[
"RNDR2"
],
"biocyc":[
"META:GDPREDUCT-RXN"
],
"ec-code":[
"1.17.4.1"
],
"kegg.reaction":[
"R02019"
],
"metanetx.reaction":[
"MNXR104062"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05233"
]
}
},
{
"id":"GRTT",
"name":"Geranyltranstransferase",
"metabolites":{
"frdp_c":1.0,
"grdp_c":-1.0,
"ipdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04025",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"GRTT"
]
},
"annotation":{
"bigg.reaction":[
"GRTT"
],
"biocyc":[
"META:FPPSYN-RXN"
],
"ec-code":[
"2.5.1.10"
],
"kegg.reaction":[
"R02003"
],
"metanetx.reaction":[
"MNXR99634"
],
"reactome.reaction":[
"R-BTA-191303",
"R-CFA-191303",
"R-CEL-191303",
"R-ATH-191303",
"R-DME-191303",
"R-OSA-191303",
"R-RNO-191303",
"R-GGA-191303",
"R-SCE-191303",
"R-PFA-191303",
"R-SPO-191303",
"R-SSC-191303",
"R-TGU-191303",
"R-HSA-191303",
"R-XTR-191303",
"R-DDI-191303",
"R-DRE-191303",
"R-MMU-191303"
],
"rhea":[
"19361",
"19364",
"19362",
"19363"
],
"sabiork":[
"2041"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01466"
]
}
},
{
"id":"NPDPS",
"name":"Nonaprenyl-diphosphate synthase (gyeranyl-diphosphate specific)",
"metabolites":{
"grdp_c":-1.0,
"ipdp_c":-7.0,
"npdp_c":1.0,
"ppi_c":7.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12000",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"NPDPS"
]
},
"annotation":{
"bigg.reaction":[
"NPDPS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3OAS100",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C10:0)",
"metabolites":{
"3odecACP_c":1.0,
"ACP_c":1.0,
"co2_c":1.0,
"h_c":-1.0,
"malACP_c":-1.0,
"ocACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS100"
]
},
"annotation":{
"bigg.reaction":[
"3OAS100"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94954"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ADSL2r",
"name":"Adenylosuccinate lyase",
"metabolites":{
"25aics_c":-1.0,
"aicar_c":1.0,
"fum_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01605",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"ADSL2r"
]
},
"annotation":{
"bigg.reaction":[
"ADSL2r"
],
"biocyc":[
"META:AICARSYN-RXN"
],
"ec-code":[
"4.3.2.2"
],
"kegg.reaction":[
"R04559"
],
"metanetx.reaction":[
"MNXR108966"
],
"reactome.reaction":[
"R-BTA-73800",
"R-SCE-73800",
"R-DME-73800",
"R-RNO-73800",
"R-ATH-73800",
"R-CEL-73800",
"R-TGU-73800",
"R-SSC-73800",
"R-PFA-73800",
"R-SPO-73800",
"R-GGA-419255",
"R-DDI-73800",
"R-OSA-73800",
"R-MMU-73800",
"R-GGA-73800",
"R-XTR-73800",
"R-DRE-73800",
"R-HSA-73800"
],
"rhea":[
"23920",
"23923",
"23922",
"23921"
],
"sabiork":[
"121"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MAN6PI",
"name":"Mannose-6-phosphate isomerase",
"metabolites":{
"f6p_c":1.0,
"man6p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08205",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"MAN6PI"
]
},
"annotation":{
"bigg.reaction":[
"MAN6PI"
],
"biocyc":[
"META:MANNPISOM-RXN"
],
"ec-code":[
"5.3.1.8"
],
"kegg.reaction":[
"R01819"
],
"metanetx.reaction":[
"MNXR101382"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HPROb",
"name":"L hydroxyproline reductase  NADP ",
"metabolites":{
"1p3h5c_c":-1.0,
"4hpro_LT_c":1.0,
"h_c":-2.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10440",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"HPROb"
]
},
"annotation":{
"bigg.reaction":[
"HPROb"
],
"ec-code":[
"1.5.1.2",
"1.5.1.12"
],
"kegg.reaction":[
"R03293"
],
"metanetx.reaction":[
"MNXR100699"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02358"
]
}
},
{
"id":"3OAS120",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C12:0)",
"metabolites":{
"3oddecACP_c":1.0,
"ACP_c":1.0,
"co2_c":1.0,
"dcaACP_c":-1.0,
"h_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS120"
]
},
"annotation":{
"bigg.reaction":[
"3OAS120"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94955"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NTPP2",
"name":"Nucleoside triphosphate pyrophosphorylase (gtp)",
"metabolites":{
"gmp_c":1.0,
"gtp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07630",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NTPP2"
]
},
"annotation":{
"bigg.reaction":[
"NTPP2"
],
"biocyc":[
"META:RXN-14140"
],
"ec-code":[
"3.6.1.8",
"3.6.1.-",
"3.6.1.9"
],
"kegg.reaction":[
"R00426"
],
"metanetx.reaction":[
"MNXR102052"
],
"rhea":[
"29391",
"29392",
"29393",
"29394"
],
"sabiork":[
"301"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00301"
]
}
},
{
"id":"EAR180y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C18:0)",
"metabolites":{
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"ocdcaACP_c":1.0,
"toctd2eACP_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR180y"
]
},
"annotation":{
"bigg.reaction":[
"EAR180y"
],
"ec-code":[
"1.3.1.10"
],
"metanetx.reaction":[
"MNXR97860"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DHQTi",
"name":"3-dehydroquinate dehydratase, irreversible",
"metabolites":{
"3dhq_c":-1.0,
"3dhsk_c":1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04705",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"DHQTi"
]
},
"annotation":{
"bigg.reaction":[
"DHQTi"
],
"biocyc":[
"META:3-DEHYDROQUINATE-DEHYDRATASE-RXN"
],
"ec-code":[
"4.2.1.10"
],
"kegg.reaction":[
"R03084"
],
"metanetx.reaction":[
"MNXR97449"
],
"rhea":[
"21099",
"21097",
"21096",
"21098"
],
"sabiork":[
"2924"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02213"
]
}
},
{
"id":"3OAS60",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C6:0)",
"metabolites":{
"3ohexACP_c":1.0,
"ACP_c":1.0,
"butACP_c":-1.0,
"co2_c":1.0,
"h_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS60"
]
},
"annotation":{
"bigg.reaction":[
"3OAS60"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94963"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR40y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C4:0)",
"metabolites":{
"but2eACP_c":-1.0,
"butACP_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR40y"
]
},
"annotation":{
"bigg.reaction":[
"EAR40y"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR97864"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MG2uabcpp",
"name":"Magnesium (Mg+2) ABC transporter (ubtake, periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"mg2_c":1.0,
"mg2_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06500",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"MG2uabcpp"
]
},
"annotation":{
"bigg.reaction":[
"MG2uabcpp"
],
"biocyc":[
"META:TRANS-RXN-250",
"META:3.6.3.2-RXN"
],
"ec-code":[
"3.6.3.2"
],
"metanetx.reaction":[
"MNXR101505"
],
"rhea":[
"10261#1",
"10262#1",
"10260#1",
"10263#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08924",
"rxn10571"
]
}
},
{
"id":"KARA1",
"name":"Ketol-acid reductoisomerase (2,3-dihydroxy-3-methylbutanoate)",
"metabolites":{
"23dhmb_c":-1.0,
"alac__S_c":1.0,
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS07915",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"KARA1i"
]
},
"annotation":{
"bigg.reaction":[
"KARA1"
],
"biocyc":[
"META:ACETOLACTREDUCTOISOM-RXN"
],
"ec-code":[
"1.1.1.86",
"1.1.1.383"
],
"kegg.reaction":[
"R04439"
],
"metanetx.reaction":[
"MNXR97523"
],
"rhea":[
"22070",
"22068",
"22069",
"22071"
],
"sbo":"SBO:0000176"
}
},
{
"id":"TKT1",
"name":"Transketolase",
"metabolites":{
"g3p_c":1.0,
"r5p_c":-1.0,
"s7p_c":1.0,
"xu5p__D_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02735",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"TKT1"
]
},
"annotation":{
"bigg.reaction":[
"TKT1"
],
"ec-code":[
"2.2.1.1"
],
"metanetx.reaction":[
"MNXR104868"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PTRCabcpp",
"name":"Putrescine transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"ptrc_c":1.0,
"ptrc_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11515",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"PTRCabcpp"
]
},
"annotation":{
"bigg.reaction":[
"PTRCabcpp"
],
"biocyc":[
"META:ABC-25-RXN"
],
"ec-code":[
"3.6.3.31"
],
"metanetx.reaction":[
"MNXR103338"
],
"rhea":[
"29998#1",
"29996#1",
"29995#1",
"29997#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn11263",
"rxn05163",
"rxn09213"
]
}
},
{
"id":"IPDDI",
"name":"Isopentenyl-diphosphate D-isomerase",
"metabolites":{
"dmpp_c":1.0,
"ipdp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09810",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"IPDDI"
]
},
"annotation":{
"bigg.reaction":[
"IPDDI"
],
"biocyc":[
"META:IPPISOM-RXN"
],
"ec-code":[
"5.3.3.2"
],
"kegg.reaction":[
"R01123"
],
"metanetx.reaction":[
"MNXR100796"
],
"reactome.reaction":[
"R-ATH-191382",
"R-SPO-191382",
"R-MMU-191382",
"R-CFA-191382",
"R-OSA-191382",
"R-RNO-191382",
"R-GGA-191382",
"R-DDI-191382",
"R-HSA-191382",
"R-CEL-191382",
"R-TGU-191382",
"R-XTR-191382",
"R-SSC-191382",
"R-DME-191382",
"R-BTA-191382",
"R-DRE-191382",
"R-SCE-191382"
],
"rhea":[
"23286",
"23287",
"23285",
"23284"
],
"sabiork":[
"1382"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00830"
]
}
},
{
"id":"PKETF",
"name":"Phosphoketolase (fructose-6-phosphate utilizing)",
"metabolites":{
"actp_c":1.0,
"e4p_c":1.0,
"f6p_c":-1.0,
"h2o_c":1.0,
"pi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10545",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"PKETF"
]
},
"annotation":{
"bigg.reaction":[
"PKETF"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACODA",
"name":"Acetylornithine deacetylase",
"metabolites":{
"ac_c":1.0,
"acorn_c":-1.0,
"h2o_c":-1.0,
"orn_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01305 or Synpcc7942_1971",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ACODA"
]
},
"annotation":{
"bigg.reaction":[
"ACODA"
],
"biocyc":[
"META:ACETYLORNDEACET-RXN"
],
"ec-code":[
"3.5.1.16",
"3.5.1.14"
],
"kegg.reaction":[
"R00669"
],
"metanetx.reaction":[
"MNXR95377"
],
"rhea":[
"15941",
"15942",
"15944",
"15943"
],
"sabiork":[
"1049"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00469"
]
}
},
{
"id":"ENO",
"name":"Enolase",
"metabolites":{
"2pg_c":-1.0,
"h2o_c":1.0,
"pep_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03280",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"ENO"
]
},
"annotation":{
"bigg.reaction":[
"ENO"
],
"biocyc":[
"META:2PGADEHYDRAT-RXN"
],
"ec-code":[
"4.2.1.11"
],
"kegg.reaction":[
"R00658"
],
"metanetx.reaction":[
"MNXR97932"
],
"reactome.reaction":[
"R-BTA-71660",
"R-RNO-70494",
"R-TGU-71660",
"R-SSC-71660",
"R-GGA-352981",
"R-DME-70494",
"R-CFA-70494",
"R-OSA-70494",
"R-SCE-71660",
"R-GGA-353044",
"R-CFA-71660",
"R-GGA-70494",
"R-PFA-71660",
"R-SPO-71660",
"R-SPO-70494",
"R-DDI-70494",
"R-RNO-71660",
"R-MMU-70494",
"R-ATH-70494",
"R-SCE-70494",
"R-SSC-70494",
"R-HSA-70494",
"R-DME-71660",
"R-CEL-71660",
"R-HSA-71660",
"R-TGU-70494",
"R-XTR-71660",
"R-DRE-70494",
"R-DRE-71660",
"R-MMU-71660",
"R-ATH-71660",
"R-BTA-70494",
"R-CEL-70494",
"R-XTR-70494",
"R-DDI-71660",
"R-OSA-71660",
"R-PFA-70494",
"R-GGA-71660"
],
"rhea":[
"10166",
"10165",
"10164",
"10167"
],
"sabiork":[
"8"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00459"
]
}
},
{
"id":"NDHPQRcm",
"name":"NADH:plastoquinone reductase (non-electrogenic)",
"metabolites":{
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0,
"pq_cm":-1.0,
"pqh2_cm":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01005 or SYNPCC7942_RS00515",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NDHPQRcm"
]
},
"annotation":{
"bigg.reaction":[
"NDHPQRcm"
],
"sbo":"SBO:0000185"
}
},
{
"id":"NI2uabcpp",
"name":"Nickel transport via ABC system (uptake, periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"ni2_c":1.0,
"ni2_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08020 or SYNPCC7942_RS11780",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"NI2uabcpp"
]
},
"annotation":{
"bigg.reaction":[
"NI2uabcpp"
],
"biocyc":[
"META:ABC-20-RXN",
"META:3.6.3.24-RXN"
],
"ec-code":[
"3.6.3.24"
],
"metanetx.reaction":[
"MNXR101959"
],
"rhea":[
"15557#1",
"15558#1",
"15560#1",
"15559#1"
],
"sbo":"SBO:0000185"
}
},
{
"id":"Kabcpp",
"name":"Potassium ABC transporter (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"k_c":1.0,
"k_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08505 and SYNPCC7942_RS08510 and SYNPCC7942_RS08515 and SYNPCC7942_RS08800",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"Kabcpp"
]
},
"annotation":{
"bigg.reaction":[
"Kabcpp"
],
"biocyc":[
"META:3.6.3.12-RXN",
"META:TRANS-RXN-2",
"META:3.6.3.10-RXN"
],
"ec-code":[
"3.6.3.10",
"3.6.3.12"
],
"metanetx.reaction":[
"MNXR100657"
],
"rhea":[
"16777#1",
"16778#1",
"16779#1",
"16780#1"
],
"sabiork":[
"9646#2"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08762",
"rxn10168",
"rxn10558"
]
}
},
{
"id":"TDPDRR",
"name":"DTDP-4-dehydrorhamnose reductase",
"metabolites":{
"dtdp4d6dm_c":-1.0,
"dtdprmn_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10640",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"TDPDRR"
]
},
"annotation":{
"bigg.reaction":[
"TDPDRR"
],
"biocyc":[
"META:DTDPDEHYRHAMREDUCT-RXN"
],
"ec-code":[
"1.1.1.133"
],
"kegg.reaction":[
"R02777"
],
"metanetx.reaction":[
"MNXR104760"
],
"rhea":[
"21796",
"21797",
"21798",
"21799"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02003"
]
}
},
{
"id":"UAGCVT",
"name":"UDP-N-acetylglucosamine 1-carboxyvinyltransferase",
"metabolites":{
"pep_c":-1.0,
"pi_c":1.0,
"uaccg_c":1.0,
"uacgam_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03670",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UAGCVT"
]
},
"annotation":{
"bigg.reaction":[
"UAGCVT"
],
"biocyc":[
"META:UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN"
],
"ec-code":[
"2.5.1.7"
],
"kegg.reaction":[
"R00660"
],
"metanetx.reaction":[
"MNXR105032"
],
"rhea":[
"18681",
"18682",
"18683",
"18684"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00461"
]
}
},
{
"id":"TDPGDH",
"name":"DTDPglucose 4,6-dehydratase",
"metabolites":{
"dtdp4d6dg_c":1.0,
"dtdpglu_c":-1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10645",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"TDPGDH"
]
},
"annotation":{
"bigg.reaction":[
"TDPGDH"
],
"biocyc":[
"META:DTDPGLUCDEHYDRAT-RXN"
],
"ec-code":[
"4.2.1.46"
],
"kegg.reaction":[
"R06513"
],
"metanetx.reaction":[
"MNXR104761"
],
"rhea":[
"17221",
"17222",
"17224",
"17223"
],
"sabiork":[
"2648"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01997"
]
}
},
{
"id":"PRASCSi",
"name":"Phosphoribosylaminoimidazolesuccinocarboxamide synthase",
"metabolites":{
"25aics_c":1.0,
"5aizc_c":-1.0,
"adp_c":1.0,
"asp__L_c":-1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04770",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"PRASCSi"
]
},
"annotation":{
"bigg.reaction":[
"PRASCSi"
],
"biocyc":[
"META:SAICARSYN-RXN"
],
"ec-code":[
"6.3.2.6"
],
"kegg.reaction":[
"R04591"
],
"metanetx.reaction":[
"MNXR108987"
],
"reactome.reaction":[
"R-TGU-73805",
"R-DME-73805",
"R-GGA-419223",
"R-GGA-73805",
"R-CEL-73805",
"R-HSA-73805",
"R-BTA-73805",
"R-XTR-73805",
"R-DRE-73805",
"R-RNO-73805",
"R-CFA-73805",
"R-MMU-73805",
"R-SSC-73805"
],
"rhea":[
"22631",
"22628",
"22629",
"22630"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PRFGS",
"name":"Phosphoribosylformylglycinamidine synthase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"fgam_c":-1.0,
"fpram_c":1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00015 and SYNPCC7942_RS04230 and SYNPCC7942_RS04235",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"PRFGS"
]
},
"annotation":{
"bigg.reaction":[
"PRFGS"
],
"ec-code":[
"6.3.5.3"
],
"metanetx.reaction":[
"MNXR138721"
],
"reactome.reaction":[
"R-DME-73812",
"R-DDI-73812",
"R-DRE-73812",
"R-GGA-73812",
"R-MMU-73812",
"R-RNO-73812",
"R-SCE-73812",
"R-SSC-73812",
"R-XTR-73812",
"R-HSA-73812",
"R-BTA-73812",
"R-ATH-73812",
"R-GGA-419144",
"R-CEL-73812",
"R-CFA-73812",
"R-SPO-73812",
"R-OSA-73812"
],
"rhea":[
"17132",
"17129",
"17131",
"17130"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MG2tex",
"name":"Magnesium (Mg+2) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"mg2_e":-1.0,
"mg2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07015",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"MG2tex"
]
},
"annotation":{
"bigg.reaction":[
"MG2tex"
],
"biocyc":[
"META:TRANS-RXN-141"
],
"metanetx.reaction":[
"MNXR101507"
],
"reactome.reaction":[
"R-MMU-442661",
"R-OSA-5336466",
"R-BTA-5336453",
"R-SSC-442661",
"R-MMU-5336453",
"R-HSA-5339528",
"R-MMU-5336466",
"R-TGU-5339538",
"R-SCE-5336466",
"R-SCE-5339538",
"R-XTR-5336466",
"R-GGA-442661",
"R-ATH-5336453",
"R-BTA-5336466",
"R-RNO-5339538",
"R-SSC-5339538",
"R-SPO-5339528",
"R-DME-5339528",
"R-GGA-5339538",
"R-CEL-5336453",
"R-TGU-5336453",
"R-OSA-5336453",
"R-SCE-5339528",
"R-ATH-5336466",
"R-CFA-5336453",
"R-CEL-5339528",
"R-SPO-5339538",
"R-SSC-5336466",
"R-XTR-5339528",
"R-SSC-5339528",
"R-DRE-5339528",
"R-BTA-5339528",
"R-CFA-442661",
"R-CFA-5339538",
"R-DME-442661",
"R-DME-5339538",
"R-DRE-5339538",
"R-MMU-5339538",
"R-RNO-442661",
"R-RNO-5336453",
"R-DDI-5336466",
"R-RNO-5339528",
"R-HSA-442661",
"R-HSA-5336453",
"R-TGU-5336466",
"R-DRE-5336466",
"R-BTA-442661",
"R-DRE-5336453",
"R-HSA-5339538",
"R-HSA-5336454",
"R-TGU-5339528",
"R-GGA-5339528",
"R-XTR-5339538",
"R-MMU-5339528",
"R-DME-5336453",
"R-RNO-5336466",
"R-CFA-5336466",
"R-CEL-442661",
"R-SPO-5336466",
"R-GGA-5336453",
"R-BTA-5339538",
"R-TGU-442661",
"R-HSA-5336466",
"R-XTR-442661",
"R-CEL-5339538",
"R-MMU-5336430",
"R-DRE-442661",
"R-GGA-5336466",
"R-CFA-5339528"
],
"rhea":[
"29827",
"29828",
"29829",
"29830"
],
"sabiork":[
"12062"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05616",
"rxn08922",
"rxn08923"
]
}
},
{
"id":"GLU5K",
"name":"Glutamate 5-kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glu5p_c":1.0,
"glu__L_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11160",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"GLU5K"
]
},
"annotation":{
"bigg.reaction":[
"GLU5K"
],
"biocyc":[
"META:GLUTKIN-RXN"
],
"ec-code":[
"2.7.2.11"
],
"kegg.reaction":[
"R00239"
],
"metanetx.reaction":[
"MNXR100277"
],
"rhea":[
"14878",
"14880",
"14877",
"14879"
],
"sabiork":[
"752"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00179"
]
}
},
{
"id":"TRDR",
"name":"Thioredoxin reductase (NADPH)",
"metabolites":{
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"trdox_c":-1.0,
"trdrd_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03195",
"subsystem":"Cofactor Regeneration",
"notes":{
"original_bigg_ids":[
"TRDR"
]
},
"annotation":{
"bigg.reaction":[
"TRDR"
],
"biocyc":[
"META:THIOREDOXIN-REDUCT-NADPH-RXN"
],
"ec-code":[
"1.8.1.9",
"1.6.4.5"
],
"kegg.reaction":[
"R02016"
],
"metanetx.reaction":[
"MNXR104766"
],
"sabiork":[
"489"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05289"
]
}
},
{
"id":"GLUPRT",
"name":"Glutamine phosphoribosyldiphosphate amidotransferase",
"metabolites":{
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"ppi_c":1.0,
"pram_c":1.0,
"prpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00020",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"GLUPRT"
]
},
"annotation":{
"bigg.reaction":[
"GLUPRT"
],
"biocyc":[
"META:PRPPAMIDOTRANS-RXN"
],
"ec-code":[
"2.4.2.14"
],
"kegg.reaction":[
"R01072"
],
"metanetx.reaction":[
"MNXR100287"
],
"reactome.reaction":[
"R-DME-73815",
"R-GGA-73815",
"R-SPO-73815",
"R-OSA-73815",
"R-TGU-73815",
"R-GGA-419152",
"R-ATH-73815",
"R-MMU-73815",
"R-SSC-73815",
"R-DDI-73815",
"R-CEL-73815",
"R-CFA-73815",
"R-SCE-73815",
"R-BTA-73815",
"R-RNO-73815",
"R-XTR-73815",
"R-DRE-73815",
"R-HSA-73815"
],
"rhea":[
"14905",
"14908",
"14906",
"14907"
],
"sabiork":[
"114"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00790"
]
}
},
{
"id":"PSERT",
"name":"Phosphoserine transaminase",
"metabolites":{
"3php_c":-1.0,
"akg_c":1.0,
"glu__L_c":-1.0,
"pser__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00970",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"PSERT"
]
},
"annotation":{
"bigg.reaction":[
"PSERT"
],
"biocyc":[
"META:PSERTRANSAM-RXN"
],
"ec-code":[
"2.6.1.52"
],
"kegg.reaction":[
"R04173"
],
"metanetx.reaction":[
"MNXR103225"
],
"reactome.reaction":[
"R-DRE-977333",
"R-DDI-977333",
"R-CEL-977333",
"R-BTA-977333",
"R-HSA-977333",
"R-SPO-977333",
"R-XTR-977333",
"R-CFA-977333",
"R-DME-977333",
"R-GGA-977333",
"R-MMU-977333",
"R-SCE-977333",
"R-RNO-977333",
"R-ATH-977333",
"R-OSA-977333",
"R-TGU-977333",
"R-SSC-977333"
],
"rhea":[
"14331",
"14329",
"14330",
"14332"
],
"sabiork":[
"3893"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02914"
]
}
},
{
"id":"PC8XM",
"name":"Precorrin-8X methylmutase",
"metabolites":{
"h_c":-1.0,
"hgbyr_c":1.0,
"pre8_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09395",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PC8XM"
]
},
"annotation":{
"bigg.reaction":[
"PC8XM"
],
"biocyc":[
"META:5.4.1.2-RXN"
],
"ec-code":[
"5.4.99.61"
],
"kegg.reaction":[
"R05177"
],
"metanetx.reaction":[
"MNXR138689"
],
"rhea":[
"22515",
"22512",
"22513",
"22514"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03512"
]
}
},
{
"id":"GMPS2",
"name":"GMP synthase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"gmp_c":1.0,
"h2o_c":-1.0,
"h_c":2.0,
"ppi_c":1.0,
"xmp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00960",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"GMPS2"
]
},
"annotation":{
"bigg.reaction":[
"GMPS2"
],
"biocyc":[
"META:GMP-SYN-GLUT-RXN"
],
"ec-code":[
"6.3.5.2"
],
"kegg.reaction":[
"R01231"
],
"metanetx.reaction":[
"MNXR100384"
],
"rhea":[
"11680",
"11682",
"11681",
"11683"
],
"sabiork":[
"215"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00917"
]
}
},
{
"id":"RBFK",
"name":"Riboflavin kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"fmn_c":1.0,
"h_c":1.0,
"ribflv_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02505",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"RBFK"
]
},
"annotation":{
"bigg.reaction":[
"RBFK"
],
"biocyc":[
"META:RIBOFLAVINKIN-RXN"
],
"ec-code":[
"2.7.1.26"
],
"kegg.reaction":[
"R00549"
],
"metanetx.reaction":[
"MNXR103429"
],
"reactome.reaction":[
"R-TGU-196964",
"R-RNO-196964",
"R-SPO-196964",
"R-CEL-196964",
"R-HSA-196964",
"R-MMU-196964",
"R-DME-196964",
"R-BTA-196964",
"R-SSC-196964",
"R-CFA-196964",
"R-GGA-196964",
"R-XTR-196964",
"R-SCE-196964",
"R-DRE-196964",
"R-PFA-196964"
],
"rhea":[
"14360",
"14359",
"14358",
"14357"
],
"sabiork":[
"277"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00392"
]
}
},
{
"id":"NTRIRfx",
"name":"Nitrite reductase (ferredoxin)",
"metabolites":{
"fdxox_c":6.0,
"fdxrd_c":-6.0,
"h2o_c":2.0,
"h_c":-8.0,
"nh4_c":1.0,
"no2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06355",
"subsystem":"Nitrogen metabolism",
"notes":{
"original_bigg_ids":[
"NTRIRfx"
]
},
"annotation":{
"bigg.reaction":[
"NTRIRfx"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UPP3MT",
"name":"Uroporphyrinogen methyltransferase",
"metabolites":{
"ahcys_c":2.0,
"amet_c":-2.0,
"dscl_c":1.0,
"h_c":1.0,
"uppg3_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01380",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"UPP3MT"
]
},
"annotation":{
"bigg.reaction":[
"UPP3MT"
],
"biocyc":[
"META:RXN-13403"
],
"ec-code":[
"2.1.1.107"
],
"kegg.reaction":[
"R03194"
],
"metanetx.reaction":[
"MNXR105137"
],
"rhea":[
"32462",
"32461",
"32459",
"32460"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02287"
]
}
},
{
"id":"ACS",
"name":"Acetyl-CoA synthetase",
"metabolites":{
"ac_c":-1.0,
"accoa_c":1.0,
"amp_c":1.0,
"atp_c":-1.0,
"coa_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06910",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"ACS"
]
},
"annotation":{
"bigg.reaction":[
"ACS"
],
"biocyc":[
"META:ACETATE--COA-LIGASE-RXN"
],
"ec-code":[
"6.2.1.1"
],
"kegg.reaction":[
"R00235"
],
"metanetx.reaction":[
"MNXR95413"
],
"reactome.reaction":[
"R-DME-71735",
"R-TGU-449911",
"R-BTA-8875071",
"R-CEL-71735",
"R-DRE-449911",
"R-CFA-71735",
"R-TGU-71735",
"R-SCE-71735",
"R-CFA-8875071",
"R-BTA-71735",
"R-SPO-449911",
"R-CFA-449911",
"R-MMU-8875071",
"R-GGA-8875071",
"R-OSA-71735",
"R-HSA-71735",
"R-HSA-449911",
"R-SSC-8875071",
"R-RNO-71735",
"R-SSC-449911",
"R-BTA-449911",
"R-GGA-71735",
"R-SSC-71735",
"R-XTR-449911",
"R-ATH-71735",
"R-DRE-71735",
"R-DME-8875071",
"R-DDI-8875071",
"R-XTR-8875071",
"R-PFA-449911",
"R-SCE-449911",
"R-SCE-8875071",
"R-DRE-8875071",
"R-MMU-71735",
"R-MMU-449911",
"R-XTR-71735",
"R-RNO-8875071",
"R-DDI-449911",
"R-TGU-8875071",
"R-HSA-8875071",
"R-GGA-449911",
"R-RNO-449911"
],
"rhea":[
"23179",
"23178",
"23176",
"23177"
],
"sabiork":[
"179"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00175"
]
}
},
{
"id":"DHNCOAS",
"name":"1,4-dihydroxy-2-napthoyl-CoA synthase",
"metabolites":{
"14dhncoa_c":1.0,
"h2o_c":1.0,
"h_c":-1.0,
"sbzcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03060",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"DHNCOAS"
]
},
"annotation":{
"bigg.reaction":[
"DHNCOAS"
],
"metanetx.reaction":[
"MNXR97412"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MCOATA",
"name":"Malonyl-CoA-ACP transacylase",
"metabolites":{
"ACP_c":-1.0,
"coa_c":1.0,
"malACP_c":1.0,
"malcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07450",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"MCOATA"
]
},
"annotation":{
"bigg.reaction":[
"MCOATA"
],
"biocyc":[
"META:MALONYL-COA-ACP-TRANSACYL-RXN"
],
"ec-code":[
"2.3.1.85",
"2.3.1.86",
"2.3.1.0",
"2.3.1.39",
"2.3.1.-"
],
"kegg.reaction":[
"R01626"
],
"metanetx.reaction":[
"MNXR101421"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05465"
]
}
},
{
"id":"GTHPi",
"name":"Glutathione peridoxase",
"metabolites":{
"gthox_c":1.0,
"gthrd_c":-2.0,
"h2o2_c":-1.0,
"h2o_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06220",
"subsystem":"Cofactor Regeneration",
"notes":{
"original_bigg_ids":[
"GTHPi"
]
},
"annotation":{
"bigg.reaction":[
"GTHPi"
],
"biocyc":[
"META:GLUTATHIONE-PEROXIDASE-RXN"
],
"ec-code":[
"1.11.1.9"
],
"kegg.reaction":[
"R00274"
],
"metanetx.reaction":[
"MNXR100446"
],
"reactome.reaction":[
"R-PFA-3341397",
"R-CFA-71676",
"R-SPO-71676",
"R-SPO-3341397",
"R-MMU-71676",
"R-RNO-3341277",
"R-SPO-3341277",
"R-HSA-3341397",
"R-MMU-3343700",
"R-SPO-3323013",
"R-RNO-3323013",
"R-SCE-3341277",
"R-DRE-3341277",
"R-GGA-3341397",
"R-GGA-71676",
"R-CEL-3343700",
"R-SCE-3341397",
"R-CEL-3323013",
"R-GGA-3341277",
"R-GGA-3323013",
"R-BTA-3341397",
"R-CEL-3341277",
"R-CEL-3341397",
"R-CFA-3341397",
"R-CFA-3343700",
"R-SCE-3323013",
"R-XTR-3341397",
"R-DRE-3343700",
"R-CEL-71676",
"R-RNO-3343700",
"R-TGU-71676",
"R-XTR-3341277",
"R-CFA-3341277",
"R-CFA-3323013",
"R-HSA-71676",
"R-RNO-71676",
"R-TGU-3341397",
"R-PFA-71676",
"R-BTA-3343700",
"R-MMU-3341277",
"R-TGU-3323013",
"R-RNO-3341397",
"R-XTR-3343700",
"R-SSC-3341277",
"R-PFA-3341277",
"R-HSA-3341277",
"R-MMU-3323013",
"R-HSA-3323013",
"R-DRE-3341397",
"R-BTA-3341277",
"R-PFA-3323013",
"R-HSA-3343700",
"R-SCE-71676",
"R-MMU-3341397"
],
"rhea":[
"16833",
"16836",
"16834",
"16835"
],
"sabiork":[
"376"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00205"
]
}
},
{
"id":"ARGSS",
"name":"Argininosuccinate synthase",
"metabolites":{
"amp_c":1.0,
"argsuc_c":1.0,
"asp__L_c":-1.0,
"atp_c":-1.0,
"citr__L_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00045",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ARGSS"
]
},
"annotation":{
"bigg.reaction":[
"ARGSS"
],
"biocyc":[
"META:ARGSUCCINSYN-RXN"
],
"ec-code":[
"6.3.4.5"
],
"kegg.reaction":[
"R01954"
],
"metanetx.reaction":[
"MNXR138060"
],
"reactome.reaction":[
"R-MMU-70577",
"R-RNO-70577",
"R-GGA-70577",
"R-BTA-70577",
"R-SSC-70577",
"R-CFA-70577",
"R-XTR-70577",
"R-TGU-70577",
"R-HSA-70577"
],
"rhea":[
"10933",
"10935",
"10934",
"10932"
],
"sabiork":[
"572"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01434"
]
}
},
{
"id":"PKETX",
"name":"Phosphoketolase (xylulose-5-phosphate utilizing)",
"metabolites":{
"actp_c":1.0,
"g3p_c":1.0,
"h2o_c":1.0,
"pi_c":-1.0,
"xu5p__D_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10545",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"PKETX"
]
},
"annotation":{
"bigg.reaction":[
"PKETX"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PMPK",
"name":"Phosphomethylpyrimidine kinase",
"metabolites":{
"2mahmp_c":1.0,
"4ampm_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12090",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"PMPK"
]
},
"annotation":{
"bigg.reaction":[
"PMPK"
],
"ec-code":[
"2.7.4.7"
],
"metanetx.reaction":[
"MNXR143305"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03108"
]
}
},
{
"id":"HMBS",
"name":"Hydroxymethylbilane synthase",
"metabolites":{
"h2o_c":-1.0,
"hmbil_c":1.0,
"nh4_c":4.0,
"ppbng_c":-4.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04970",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"HMBS"
]
},
"annotation":{
"bigg.reaction":[
"HMBS"
],
"biocyc":[
"META:OHMETHYLBILANESYN-RXN"
],
"ec-code":[
"2.5.1.61",
"4.3.1.8"
],
"kegg.reaction":[
"R00084"
],
"metanetx.reaction":[
"MNXR100658"
],
"reactome.reaction":[
"R-GGA-421439",
"R-XTR-189406",
"R-DRE-189406",
"R-BTA-189406",
"R-GGA-189406",
"R-MMU-189406",
"R-OSA-189406",
"R-PFA-189406",
"R-SSC-189406",
"R-SPO-189406",
"R-DDI-189406",
"R-DME-189406",
"R-SCE-189406",
"R-HSA-189406",
"R-RNO-189406",
"R-CFA-189406",
"R-ATH-189406",
"R-TGU-189406"
],
"rhea":[
"13187",
"13186",
"13185",
"13188"
],
"sabiork":[
"669"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00060"
]
}
},
{
"id":"PTPATi",
"name":"Pantetheine-phosphate adenylyltransferase",
"metabolites":{
"atp_c":-1.0,
"dpcoa_c":1.0,
"h_c":-1.0,
"pan4p_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10180",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PTPATi"
]
},
"annotation":{
"bigg.reaction":[
"PTPATi"
],
"biocyc":[
"META:PANTEPADENYLYLTRAN-RXN"
],
"ec-code":[
"2.7.7.3"
],
"kegg.reaction":[
"R03035"
],
"metanetx.reaction":[
"MNXR95892"
],
"reactome.reaction":[
"R-CFA-196754",
"R-ATH-196754",
"R-SSC-196754",
"R-DDI-196754",
"R-XTR-196754",
"R-CEL-196754",
"R-RNO-196754",
"R-PFA-196754",
"R-GGA-196754",
"R-HSA-196754",
"R-SCE-196754",
"R-DRE-196754",
"R-TGU-196754",
"R-OSA-196754",
"R-MMU-196754",
"R-BTA-196754",
"R-DME-196754"
],
"rhea":[
"19803",
"19802",
"19801",
"19804"
],
"sabiork":[
"2884",
"12078"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02175"
]
}
},
{
"id":"PGLYCP",
"name":"Phosphoglycolate phosphatase",
"metabolites":{
"2pglyc_c":-1.0,
"glyclt_c":1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13310",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"PGLYCP"
]
},
"annotation":{
"bigg.reaction":[
"PGLYCP"
],
"biocyc":[
"META:GPH-RXN"
],
"ec-code":[
"3.1.3.18"
],
"kegg.reaction":[
"R01334"
],
"metanetx.reaction":[
"MNXR102543"
],
"rhea":[
"14369",
"14371",
"14370",
"14372"
],
"sabiork":[
"433"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00980"
]
}
},
{
"id":"HTHRPDH",
"name":"4-hydroxythreonine-4-phosphate dehydrogenase",
"metabolites":{
"2a3pp_c":1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"phthr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04160",
"subsystem":"Cofactor biosynthesis: Vitamin B6",
"notes":{
"original_bigg_ids":[
"HTHRPDH"
]
},
"annotation":{
"bigg.reaction":[
"HTHRPDH"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UAGAAT2",
"name":"UDP-N-acetylglucosamine acyltransferase (Synechococcus elongatus 7942)",
"metabolites":{
"3hpalmACP_c":-1.0,
"ACP_c":1.0,
"u3aga2_c":1.0,
"uacgam_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04790 or SYNPCC7942_RS12050",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"UAGAAT2"
]
},
"annotation":{
"bigg.reaction":[
"UAGAAT2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SPTc",
"name":"Serine-pyruvate aminotransferase",
"metabolites":{
"ala__L_c":1.0,
"hpyr_c":1.0,
"pyr_c":-1.0,
"ser__L_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10975",
"subsystem":"Amino acid metabolism: Alanine, Aspartate and Glutamate metabolism",
"notes":{
"original_bigg_ids":[
"SPTr"
]
},
"annotation":{
"bigg.reaction":[
"SPTc"
],
"biocyc":[
"META:SERINE--PYRUVATE-AMINOTRANSFERASE-RXN"
],
"ec-code":[
"2.6.1.51"
],
"kegg.reaction":[
"R00585"
],
"metanetx.reaction":[
"MNXR104504"
],
"rhea":[
"22852",
"22853",
"22855",
"22854"
],
"sabiork":[
"985"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00422"
]
}
},
{
"id":"GTHOr",
"name":"Glutathione oxidoreductase",
"metabolites":{
"gthox_c":-1.0,
"gthrd_c":2.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04355",
"subsystem":"Cofactor Regeneration",
"notes":{
"original_bigg_ids":[
"GTHOr"
]
},
"annotation":{
"bigg.reaction":[
"GTHOr"
],
"biocyc":[
"META:GLUTATHIONE-REDUCT-NADPH-RXN"
],
"ec-code":[
"1.8.1.7"
],
"kegg.reaction":[
"R00115"
],
"metanetx.reaction":[
"MNXR100098"
],
"reactome.reaction":[
"R-BTA-3323079",
"R-DDI-3323079",
"R-DDI-71682",
"R-SPO-71682",
"R-DRE-3323079",
"R-CEL-71682",
"R-GGA-71682",
"R-ATH-3323079",
"R-XTR-71682",
"R-DRE-71682",
"R-SCE-3323079",
"R-ATH-71682",
"R-MMU-3323079",
"R-OSA-71682",
"R-SPO-3323079",
"R-BTA-71682",
"R-TGU-71682",
"R-GGA-3323079",
"R-MMU-71682",
"R-CFA-71682",
"R-SSC-3323079",
"R-HSA-3323079",
"R-RNO-71682",
"R-CFA-3323079",
"R-PFA-3323079",
"R-CEL-3323079",
"R-HSA-71682",
"R-XTR-3323079",
"R-SCE-71682",
"R-TGU-3323079",
"R-PFA-71682",
"R-SSC-71682",
"R-RNO-3323079",
"R-OSA-3323079"
],
"rhea":[
"11740",
"11743",
"11742",
"11741"
],
"sabiork":[
"695"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00086"
]
}
},
{
"id":"TDPDRE",
"name":"DTDP-4-dehydrorhamnose 3,5-epimerase",
"metabolites":{
"dtdp4d6dg_c":-1.0,
"dtdp4d6dm_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10635 or SYNPCC7942_RS00290",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"TDPDRE"
]
},
"annotation":{
"bigg.reaction":[
"TDPDRE"
],
"biocyc":[
"META:DTDPDEHYDRHAMEPIM-RXN"
],
"ec-code":[
"5.1.3.13"
],
"kegg.reaction":[
"R06514"
],
"metanetx.reaction":[
"MNXR104759"
],
"rhea":[
"16970",
"16969",
"16972",
"16971"
],
"sabiork":[
"2651"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02000"
]
}
},
{
"id":"SHK3Dr",
"name":"Shikimate dehydrogenase",
"metabolites":{
"3dhsk_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"skm_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12540",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"SHK3Dr"
]
},
"annotation":{
"bigg.reaction":[
"SHK3Dr"
],
"biocyc":[
"META:SHIKIMATE-5-DEHYDROGENASE-RXN"
],
"ec-code":[
"1.1.1.25",
"1.1.1.282"
],
"kegg.reaction":[
"R02413"
],
"metanetx.reaction":[
"MNXR104378"
],
"reactome.reaction":[
"R-MTU-964842"
],
"rhea":[
"17739",
"17738",
"17737",
"17740"
],
"sabiork":[
"2351"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01740"
]
}
},
{
"id":"ORPT",
"name":"Orotate phosphoribosyltransferase",
"metabolites":{
"orot5p_c":-1.0,
"orot_c":1.0,
"ppi_c":-1.0,
"prpp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13200",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"ORPT"
]
},
"annotation":{
"bigg.reaction":[
"ORPT"
],
"biocyc":[
"META:OROPRIBTRANS-RXN"
],
"ec-code":[
"2.4.2.10"
],
"kegg.reaction":[
"R01870"
],
"metanetx.reaction":[
"MNXR102231"
],
"reactome.reaction":[
"R-SSC-73567",
"R-CFA-73567",
"R-GGA-73567",
"R-PFA-73567",
"R-XTR-73567",
"R-BTA-73567",
"R-SCE-73567",
"R-CEL-73567",
"R-SPO-73567",
"R-DRE-73567",
"R-MMU-73567",
"R-GGA-419462",
"R-DDI-73567",
"R-HSA-73567",
"R-ATH-73567",
"R-TGU-73567",
"R-OSA-73567",
"R-DME-73567",
"R-RNO-73567"
],
"rhea":[
"10381",
"10383",
"10382",
"10380"
],
"sabiork":[
"401"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01362"
]
}
},
{
"id":"PRPPS",
"name":"Phosphoribosylpyrophosphate synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"prpp_c":1.0,
"r5p_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10710",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"PRPPS"
]
},
"annotation":{
"bigg.reaction":[
"PRPPS"
],
"ec-code":[
"2.7.6.1"
],
"metanetx.reaction":[
"MNXR103215"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CITMS",
"name":"Citramalate synthase",
"metabolites":{
"accoa_c":-1.0,
"citm_c":1.0,
"coa_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02185 or SYNPCC7942_RS07215",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"CITMS"
]
},
"annotation":{
"bigg.reaction":[
"CITMS"
],
"metanetx.reaction":[
"MNXR96734"
],
"sbo":"SBO:0000176"
}
},
{
"id":"BCT1_syn",
"name":"Bicarbonate transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"hco3_c":1.0,
"hco3_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07605 and SYNPCC7942_RS07610 and SYNPCC7942_RS07615 and SYNPCC7942_RS07620",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"BCT1_syn"
]
},
"annotation":{
"bigg.reaction":[
"BCT1_syn"
],
"metanetx.reaction":[
"MNXR96227"
],
"sbo":"SBO:0000185"
}
},
{
"id":"SPODM",
"name":"Superoxide dismutase",
"metabolites":{
"h2o2_c":1.0,
"h_c":-2.0,
"o2_c":1.0,
"o2s_c":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04145",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"SPODM"
]
},
"annotation":{
"bigg.reaction":[
"SPODM"
],
"biocyc":[
"META:SUPEROX-DISMUT-RXN"
],
"ec-code":[
"1.15.1.1"
],
"kegg.reaction":[
"R00275"
],
"metanetx.reaction":[
"MNXR104498"
],
"rhea":[
"20696",
"20699",
"20698",
"20697"
],
"sbo":"SBO:0000176"
}
},
{
"id":"TRDRf",
"name":"Thioredoxin:ferredoxin reductase",
"metabolites":{
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h_c":-2.0,
"trdox_c":-1.0,
"trdrd_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05790 and SYNPCC7942_RS08825",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"TRDRf"
]
},
"annotation":{
"bigg.reaction":[
"TRDRf"
],
"sbo":"SBO:0000176"
}
},
{
"id":"AMPTASECG",
"name":"Alanyl aminopeptidase (cys-gly)",
"metabolites":{
"cgly_c":-1.0,
"cys__L_c":1.0,
"gly_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05815 or SYNPCC7942_RS06095",
"subsystem":"Metabolism of other amino acids: Glutathione metabolism",
"notes":{
"original_bigg_ids":[
"AMPTASECG"
]
},
"annotation":{
"bigg.reaction":[
"AMPTASECG"
],
"biocyc":[
"META:RXN-6622"
],
"ec-code":[
"3.4.11.2",
"3.4.13.18",
"3.4.11.23",
"3.4.11.1",
"3.4.13.-"
],
"kegg.reaction":[
"R00899"
],
"metanetx.reaction":[
"MNXR95828"
],
"reactome.reaction":[
"R-CEL-1247910",
"R-SSC-1247910",
"R-HSA-1247910",
"R-MMU-1247910",
"R-TGU-1247910",
"R-DRE-1247910",
"R-DME-1247910",
"R-RNO-1247910",
"R-SPO-1247910",
"R-XTR-1247910",
"R-BTA-1247910",
"R-CFA-1247910",
"R-DDI-1247910",
"R-SCE-1247910",
"R-GGA-1247910"
],
"rhea":[
"28786",
"28785",
"28784",
"28783"
],
"sabiork":[
"1221"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00650"
]
}
},
{
"id":"SPRMS",
"name":"Spermine synthase",
"metabolites":{
"5mta_c":1.0,
"ametam_c":-1.0,
"h_c":1.0,
"spmd_c":-1.0,
"sprm_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03225",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"SPRMS"
]
},
"annotation":{
"bigg.reaction":[
"SPRMS"
],
"biocyc":[
"META:SPERMINE-SYNTHASE-RXN"
],
"ec-code":[
"2.5.1.22",
"2.5.1.16"
],
"kegg.reaction":[
"R02869"
],
"metanetx.reaction":[
"MNXR96042"
],
"rhea":[
"19976",
"19973",
"19974",
"19975"
],
"sabiork":[
"2733"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02061"
]
}
},
{
"id":"PGAMT",
"name":"Phosphoglucosamine mutase",
"metabolites":{
"gam1p_c":-1.0,
"gam6p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"PGAMT"
]
},
"annotation":{
"bigg.reaction":[
"PGAMT"
],
"biocyc":[
"META:5.4.2.10-RXN"
],
"ec-code":[
"5.4.2.10"
],
"kegg.reaction":[
"R02060"
],
"metanetx.reaction":[
"MNXR102526"
],
"rhea":[
"23427",
"23425",
"23426",
"23424"
],
"sabiork":[
"2077"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01485"
]
}
},
{
"id":"NNDPR",
"name":"Nicotinate-nucleotide diphosphorylase (carboxylating)",
"metabolites":{
"co2_c":1.0,
"h_c":-2.0,
"nicrnt_c":1.0,
"ppi_c":1.0,
"prpp_c":-1.0,
"quln_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04890",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NNDPR"
]
},
"annotation":{
"bigg.reaction":[
"NNDPR"
],
"biocyc":[
"META:QUINOPRIBOTRANS-RXN"
],
"ec-code":[
"2.4.2.19"
],
"kegg.reaction":[
"R03348"
],
"metanetx.reaction":[
"MNXR101980"
],
"reactome.reaction":[
"R-CFA-197268",
"R-HSA-197268",
"R-SSC-197268",
"R-RNO-197268",
"R-XTR-197268",
"R-MMU-197268",
"R-ATH-197268",
"R-OSA-197268",
"R-SCE-197268",
"R-BTA-197268",
"R-DDI-197268",
"R-TGU-197268"
],
"rhea":[
"12735",
"12733",
"12734",
"12736"
],
"sabiork":[
"3155"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02402"
]
}
},
{
"id":"ADSK",
"name":"Adenylyl-sulfate kinase",
"metabolites":{
"adp_c":1.0,
"aps_c":-1.0,
"atp_c":-1.0,
"h_c":1.0,
"paps_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04830",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"ADSK"
]
},
"annotation":{
"bigg.reaction":[
"ADSK"
],
"biocyc":[
"META:ADENYLYLSULFKIN-RXN"
],
"ec-code":[
"2.7.1.25"
],
"kegg.reaction":[
"R00509"
],
"metanetx.reaction":[
"MNXR95159"
],
"reactome.reaction":[
"R-GGA-174389",
"R-CFA-174389",
"R-DRE-174389",
"R-HSA-174389",
"R-SCE-174389",
"R-XTR-174389",
"R-TGU-174389",
"R-SPO-174389",
"R-CEL-174389",
"R-RNO-174389",
"R-ATH-174389",
"R-MMU-174389",
"R-SSC-174389",
"R-OSA-174389",
"R-DME-174389",
"R-BTA-174389"
],
"rhea":[
"24155",
"24152",
"24154",
"24153"
],
"sabiork":[
"237"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00361"
]
}
},
{
"id":"MECDPS",
"name":"2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase",
"metabolites":{
"2mecdp_c":1.0,
"2p4c2me_c":-1.0,
"cmp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06000",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"MECDPS"
]
},
"annotation":{
"bigg.reaction":[
"MECDPS"
],
"biocyc":[
"META:RXN0-302"
],
"ec-code":[
"4.6.1.12"
],
"kegg.reaction":[
"R05637"
],
"metanetx.reaction":[
"MNXR101424"
],
"rhea":[
"23864",
"23867",
"23866",
"23865"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03910"
]
}
},
{
"id":"FCLT",
"name":"Ferrochelatase",
"metabolites":{
"fe2_c":-1.0,
"h_c":2.0,
"pheme_c":1.0,
"ppp9_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00695",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"FCLT"
]
},
"annotation":{
"bigg.reaction":[
"FCLT"
],
"biocyc":[
"META:PROTOHEMEFERROCHELAT-RXN"
],
"ec-code":[
"4.99.1.1"
],
"kegg.reaction":[
"R00310"
],
"metanetx.reaction":[
"MNXR99471"
],
"rhea":[
"22585",
"22586",
"22584",
"22587"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SHCHCS3",
"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene 1-carboxylate synthase",
"metabolites":{
"2sephchc_c":-1.0,
"2shchc_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04015 or SYNPCC7942_RS12830",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"SHCHCS3"
]
},
"annotation":{
"bigg.reaction":[
"SHCHCS3"
],
"ec-code":[
"4.2.99.20"
],
"kegg.reaction":[
"R08166"
],
"metanetx.reaction":[
"MNXR111742"
],
"rhea":[
"25598",
"25600",
"25599",
"25597"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11703"
]
}
},
{
"id":"PPA",
"name":"Inorganic diphosphatase",
"metabolites":{
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":2.0,
"ppi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07080",
"subsystem":"Inorganic Ion Transport and Metabolism",
"notes":{
"original_bigg_ids":[
"PPA"
]
},
"annotation":{
"bigg.reaction":[
"PPA"
],
"biocyc":[
"META:INORGPYROPHOSPHAT-RXN"
],
"ec-code":[
"3.6.1.1"
],
"kegg.reaction":[
"R00004"
],
"metanetx.reaction":[
"MNXR100808"
],
"reactome.reaction":[
"R-GGA-6788912",
"R-HSA-449937",
"R-RNO-449937",
"R-DME-449937",
"R-RNO-71732",
"R-SSC-449937",
"R-HSA-71732",
"R-SCE-449937",
"R-SSC-71732",
"R-GGA-71732",
"R-DRE-6788912",
"R-TGU-6788912",
"R-DRE-71732",
"R-PFA-71732",
"R-BTA-6788912",
"R-CEL-71732",
"R-SPO-71732",
"R-MMU-449937",
"R-ATH-449937",
"R-CFA-6788912",
"R-DRE-449937",
"R-MMU-71732",
"R-OSA-71732",
"R-XTR-449937",
"R-CFA-71732",
"R-ATH-71732",
"R-SSC-6788912",
"R-CEL-449937",
"R-OSA-449937",
"R-BTA-449937",
"R-XTR-6788912",
"R-GGA-449937",
"R-BTA-71732",
"R-DDI-71732",
"R-HSA-6788912",
"R-SCE-71732",
"R-SPO-449937",
"R-TGU-449937",
"R-CEL-6788912",
"R-MMU-6788912",
"R-PFA-449937",
"R-TGU-71732",
"R-XTR-71732",
"R-CFA-449937",
"R-RNO-6788912",
"R-DME-71732",
"R-DDI-449937"
],
"rhea":[
"24577",
"24576",
"24579",
"24578"
],
"sabiork":[
"76"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00001",
"rxn11226"
]
}
},
{
"id":"ADCYRS",
"name":"Adenosylcobyric acid synthase (glutamine-hydrolysing)",
"metabolites":{
"adcobdam_c":-1.0,
"adcobhex_c":1.0,
"adp_c":4.0,
"atp_c":-4.0,
"gln__L_c":-4.0,
"glu__L_c":4.0,
"h2o_c":-4.0,
"h_c":4.0,
"pi_c":4.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01070",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"ADCYRS"
]
},
"annotation":{
"bigg.reaction":[
"ADCYRS"
],
"ec-code":[
"6.3.5.10"
],
"metanetx.reaction":[
"MNXR95441"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03540"
]
}
},
{
"id":"ATPPRT",
"name":"ATP phosphoribosyltransferase",
"metabolites":{
"atp_c":-1.0,
"ppi_c":1.0,
"prbatp_c":1.0,
"prpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04060 and SYNPCC7942_RS04205",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"ATPPRT"
]
},
"annotation":{
"bigg.reaction":[
"ATPPRT"
],
"biocyc":[
"META:ATPPHOSPHORIBOSYLTRANS-RXN"
],
"ec-code":[
"2.4.2.17"
],
"kegg.reaction":[
"R01071"
],
"metanetx.reaction":[
"MNXR96132"
],
"rhea":[
"18476",
"18475",
"18473",
"18474"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00789"
]
}
},
{
"id":"CUabcpp",
"name":"Copper transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cu2_c":1.0,
"cu2_p":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08020 or SYNPCC7942_RS11780",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"CUabcpp"
]
},
"annotation":{
"bigg.reaction":[
"CUabcpp"
],
"ec-code":[
"3.6.3.4"
],
"metanetx.reaction":[
"MNXR96952"
],
"rhea":[
"10377#2",
"10378#2",
"10376#2",
"10379#2"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10481"
]
}
},
{
"id":"DHQS",
"name":"3-dehydroquinate synthase",
"metabolites":{
"2dda7p_c":-1.0,
"3dhq_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02670",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"DHQS"
]
},
"annotation":{
"bigg.reaction":[
"DHQS"
],
"biocyc":[
"META:3-DEHYDROQUINATE-SYNTHASE-RXN"
],
"ec-code":[
"4.2.3.4"
],
"kegg.reaction":[
"R03083"
],
"metanetx.reaction":[
"MNXR97447"
],
"rhea":[
"21968",
"21970",
"21971",
"21969"
],
"sabiork":[
"2923"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02212"
]
}
},
{
"id":"GTHRDH_syn",
"name":"Glutathione hydralase (periplasmic)",
"metabolites":{
"cgly_c":1.0,
"glu__L_c":1.0,
"gthrd_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00940 or SYNPCC7942_RS13430",
"subsystem":"Metabolism of other amino acids: Glutathione metabolism",
"notes":{
"original_bigg_ids":[
"GTHRDH"
]
},
"annotation":{
"bigg.reaction":[
"GTHRDH_syn"
],
"biocyc":[
"META:RXN-12618",
"META:RXN-15856"
],
"ec-code":[
"3.4.19",
"3.4.19.13"
],
"kegg.reaction":[
"R00494"
],
"metanetx.reaction":[
"MNXR100136"
],
"reactome.reaction":[
"R-CEL-8943279",
"R-RNO-8943279",
"R-MMU-8943279",
"R-SPO-8943279",
"R-ATH-8943279",
"R-OSA-8943279",
"R-TGU-8943279",
"R-HSA-8943279",
"R-XTR-8943279",
"R-SSC-8943279",
"R-CFA-8943279",
"R-GGA-8943279",
"R-DME-8943279",
"R-BTA-8943279",
"R-DRE-8943279",
"R-SCE-8943279"
],
"rhea":[
"28809",
"28808",
"28807",
"28810"
],
"sabiork":[
"926"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00350"
]
}
},
{
"id":"ANPRT",
"name":"Anthranilate phosphoribosyltransferase",
"metabolites":{
"anth_c":-1.0,
"ppi_c":1.0,
"pran_c":1.0,
"prpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10765",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"ANPRT"
]
},
"annotation":{
"bigg.reaction":[
"ANPRT"
],
"biocyc":[
"META:PRTRANS-RXN"
],
"ec-code":[
"2.4.2.18"
],
"kegg.reaction":[
"R01073"
],
"metanetx.reaction":[
"MNXR95842"
],
"rhea":[
"11771",
"11770",
"11768",
"11769"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00791"
]
}
},
{
"id":"PC6AR_1",
"name":"Precorrin-6A reductase",
"metabolites":{
"h_c":2.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"pre6a_c":1.0,
"pre6b_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00110",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PC6AR"
]
},
"annotation":{
"bigg.reaction":[
"PC6AR_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ADK1",
"name":"Adenylate kinase",
"metabolites":{
"adp_c":2.0,
"amp_c":-1.0,
"atp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11240",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"ADK1"
]
},
"annotation":{
"bigg.reaction":[
"ADK1"
],
"biocyc":[
"META:ADENYL-KIN-RXN"
],
"ec-code":[
"2.7.4.3"
],
"kegg.reaction":[
"R00127"
],
"metanetx.reaction":[
"MNXR95450"
],
"reactome.reaction":[
"R-ATH-110145",
"R-SSC-110144",
"R-ATH-110144",
"R-SSC-110145",
"R-GGA-110145",
"R-PFA-110144",
"R-HSA-110145",
"R-RNO-110144",
"R-OSA-110145",
"R-SCE-110145",
"R-RNO-110145",
"R-XTR-110144",
"R-SCE-110144",
"R-PFA-110145",
"R-OSA-110144",
"R-HSA-110144",
"R-BTA-110144",
"R-DRE-110145",
"R-DRE-110144",
"R-SPO-110145",
"R-CEL-110144",
"R-CFA-110144",
"R-XTR-110145",
"R-MMU-110144",
"R-DME-110144",
"R-SPO-110144",
"R-DDI-110145",
"R-GGA-110144",
"R-TGU-110144",
"R-BTA-110145",
"R-CEL-110145",
"R-CFA-110145",
"R-DME-110145",
"R-TGU-110145",
"R-DDI-110144",
"R-MMU-110145"
],
"rhea":[
"12975",
"12973",
"12976",
"12974"
],
"sabiork":[
"82"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00097"
]
}
},
{
"id":"PRAIi",
"name":"Phosphoribosylanthranilate isomerase (irreversible)",
"metabolites":{
"2cpr5p_c":1.0,
"pran_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02080",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"PRAIi"
]
},
"annotation":{
"bigg.reaction":[
"PRAIi"
],
"biocyc":[
"META:PRAISOM-RXN"
],
"ec-code":[
"5.3.1.24"
],
"kegg.reaction":[
"R03509"
],
"metanetx.reaction":[
"MNXR103156"
],
"rhea":[
"21543",
"21542",
"21540",
"21541"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02508"
]
}
},
{
"id":"TRSARyr",
"name":"Tartronate semialdehyde reductase (NADP)",
"metabolites":{
"2h3oppan_c":-1.0,
"glyc__R_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09420",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"TRSARyr"
]
},
"annotation":{
"bigg.reaction":[
"TRSARyr"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CYNTtabcpp",
"name":"Cyanate transport",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cynt_c":1.0,
"cynt_p":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10670 and SYNPCC7942_RS10675 and Synpcc7942_2107",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"CYNTtabcpp"
]
},
"annotation":{
"bigg.reaction":[
"CYNTtabcpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"RBPCcx",
"name":"Ribulose-bisphosphate carboxylase",
"metabolites":{
"2pglyc_cx":0.01,
"3pg_cx":1.99,
"co2_cx":-0.99,
"h2o_cx":-0.99,
"h_cx":2.0,
"o2_cx":-0.01,
"rb15bp_cx":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07295 and SYNPCC7942_RS07300 and SYNPCC7942_RS07280 and SYNPCC7942_RS07270 and SYNPCC7942_RS07275 and SYNPCC7942_RS01450 and SYNPCC7942_RS01445 and SYNPCC7942_RS07285 and SYNPCC7942_RS07290",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"RBPCcx"
]
},
"annotation":{
"bigg.reaction":[
"RBPCcx"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UPP3S",
"name":"Uroporphyrinogen-III synthase",
"metabolites":{
"h2o_c":1.0,
"hmbil_c":-1.0,
"uppg3_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01385",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"UPP3S"
]
},
"annotation":{
"bigg.reaction":[
"UPP3S"
],
"biocyc":[
"META:UROGENIIISYN-RXN"
],
"ec-code":[
"4.2.1.75"
],
"kegg.reaction":[
"R03165"
],
"metanetx.reaction":[
"MNXR105139"
],
"reactome.reaction":[
"R-MMU-189488",
"R-DME-189488",
"R-RNO-189488",
"R-SCE-189488",
"R-DRE-189488",
"R-CFA-189488",
"R-TGU-189488",
"R-SSC-189488",
"R-HSA-189488",
"R-GGA-189488",
"R-GGA-421482",
"R-XTR-189488",
"R-BTA-189488",
"R-SPO-189488"
],
"rhea":[
"18966",
"18968",
"18965",
"18967"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02264"
]
}
},
{
"id":"DHNPA_1",
"name":"Dihydroneopterin aldolase",
"metabolites":{
"2ahhmp_c":1.0,
"dhnpt_c":-1.0,
"gcald_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00200",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"DHNPA_1"
]
},
"annotation":{
"bigg.reaction":[
"DHNPA_1"
],
"metanetx.reaction":[
"MNXR138235"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MOBDabcpp",
"name":"Molybdate transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"mobd_c":1.0,
"mobd_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07820 and SYNPCC7942_RS07825 and SYNPCC7942_RS07830",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"MOBDabcpp"
]
},
"annotation":{
"bigg.reaction":[
"MOBDabcpp"
],
"biocyc":[
"META:3.6.3.29-RXN",
"META:ABC-19-RXN"
],
"ec-code":[
"3.6.3.29"
],
"metanetx.reaction":[
"MNXR101689"
],
"rhea":[
"22020#1",
"22023#1",
"22021#1",
"22022#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05619",
"rxn08955"
]
}
},
{
"id":"NADK",
"name":"NAD kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09465 or SYNPCC7942_RS11710",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NADK"
]
},
"annotation":{
"bigg.reaction":[
"NADK"
],
"biocyc":[
"META:NAD-KIN-RXN"
],
"ec-code":[
"2.7.1.23"
],
"kegg.reaction":[
"R00104"
],
"metanetx.reaction":[
"MNXR101882"
],
"reactome.reaction":[
"R-DDI-197198",
"R-OSA-197198",
"R-TGU-197198",
"R-XTR-197198",
"R-SCE-197198",
"R-SPO-197198",
"R-DRE-197198",
"R-GGA-197198",
"R-ATH-197198",
"R-CFA-197198",
"R-DME-197198",
"R-MMU-197198",
"R-HSA-197198",
"R-RNO-197198",
"R-BTA-197198"
],
"rhea":[
"18631",
"18632",
"18629",
"18630"
],
"sabiork":[
"47"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00077"
]
}
},
{
"id":"BIOMASS_RNA",
"name":"Biomass: RNA",
"metabolites":{
"atp_c":-0.69466,
"bm_rna_c":1.0,
"ctp_c":-0.86375,
"gtp_c":-0.86375,
"ppi_c":3.11683,
"utp_c":-0.69466
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_RNA"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_RNA"
],
"sbo":"SBO:0000629"
}
},
{
"id":"NADTRHD",
"name":"NAD transhydrogenase",
"metabolites":{
"nad_c":-1.0,
"nadh_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08215 and SYNPCC7942_RS08220 and SYNPCC7942_RS08225",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NADTRHD"
]
},
"annotation":{
"bigg.reaction":[
"NADTRHD"
],
"biocyc":[
"META:PYRNUTRANSHYDROGEN-RXN"
],
"ec-code":[
"1.6.1.3",
"1.6.1.2",
"1.6.1.1"
],
"kegg.reaction":[
"R00112"
],
"metanetx.reaction":[
"MNXR101898"
],
"rhea":[
"11692",
"11695",
"11694",
"11693"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00083"
]
}
},
{
"id":"PGM",
"name":"Phosphoglycerate mutase",
"metabolites":{
"2pg_c":-1.0,
"3pg_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02390 or SYNPCC7942_RS10535",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"PGM"
]
},
"annotation":{
"bigg.reaction":[
"PGM"
],
"biocyc":[
"META:3PGAREARR-RXN",
"META:RXN-15513"
],
"ec-code":[
"5.4.2.1",
"5.4.2.11",
"5.4.2.12"
],
"kegg.reaction":[
"R01518"
],
"metanetx.reaction":[
"MNXR102547"
],
"reactome.reaction":[
"R-XTR-71654",
"R-SSC-71654",
"R-DME-71445",
"R-XTR-71445",
"R-RNO-71445",
"R-GGA-71654",
"R-SSC-71445",
"R-GGA-71445",
"R-DDI-71654",
"R-SPO-71654",
"R-MMU-71445",
"R-BTA-71445",
"R-CFA-71445",
"R-PFA-71445",
"R-GGA-352994",
"R-TGU-71654",
"R-SPO-71445",
"R-HSA-71445",
"R-ATH-71654",
"R-MMU-71654",
"R-BTA-71654",
"R-GGA-353014",
"R-DRE-71654",
"R-HSA-71654",
"R-CFA-71654",
"R-OSA-71654",
"R-DDI-71445",
"R-RNO-71654",
"R-DRE-71445",
"R-OSA-71445",
"R-PFA-71654",
"R-DME-71654",
"R-TGU-71445",
"R-SCE-71445",
"R-ATH-71445",
"R-SCE-71654"
],
"rhea":[
"15902",
"15903",
"15901",
"15904"
],
"sabiork":[
"7641"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01106"
]
}
},
{
"id":"FE3abcpp",
"name":"Iron (III) transport via ABC system (periplasm to cytoplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"fe3_c":1.0,
"fe3_p":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(SYNPCC7942_RS07195 and SYNPCC7942_RS07200 and SYNPCC7942_RS07210) or (SYNPCC7942_RS07195 and SYNPCC7942_RS07200 and SYNPCC7942_RS11055)",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"FE3abcpp"
]
},
"annotation":{
"bigg.reaction":[
"FE3abcpp"
],
"biocyc":[
"META:3.6.3.30-RXN"
],
"ec-code":[
"3.6.3.30"
],
"metanetx.reaction":[
"MNXR99525"
],
"rhea":[
"12335#1",
"12332#1",
"12334#1",
"12333#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05195",
"rxn08477"
]
}
},
{
"id":"DM_dialurate_c",
"name":"Modeling: demand reaction (dialurate c)",
"metabolites":{
"dialurate_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_dialurate_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_dialurate_c"
],
"sbo":"SBO:0000628"
}
},
{
"id":"CO2tex",
"name":"CO2 transport via diffusion (extracellular to periplasm)",
"metabolites":{
"co2_e":-1.0,
"co2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"CO2tex"
]
},
"annotation":{
"bigg.reaction":[
"CO2tex"
],
"biocyc":[
"META:TRANS-RXN0-545"
],
"metanetx.reaction":[
"MNXR96810"
],
"reactome.reaction":[
"R-DDI-1247645",
"R-CFA-1237069",
"R-TGU-1247649",
"R-CFA-1237042",
"R-CEL-1247645",
"R-XTR-1237069",
"R-HSA-1247645",
"R-OSA-1237042",
"R-GGA-1237042",
"R-BTA-1247645",
"R-GGA-1247649",
"R-RNO-1247645",
"R-XTR-1247645",
"R-TGU-1237042",
"R-SCE-1247649",
"R-MMU-1247649",
"R-CFA-1247649",
"R-GGA-1247645",
"R-SSC-1247645",
"R-BTA-1237069",
"R-RNO-1237069",
"R-SCE-1237042",
"R-DDI-1247649",
"R-SSC-1237042",
"R-DRE-1247649",
"R-DRE-1237042",
"R-DDI-1237042",
"R-DME-1237042",
"R-MMU-1237042",
"R-SSC-1247649",
"R-TGU-1237069",
"R-BTA-1247649",
"R-CFA-1247645",
"R-RNO-1247649",
"R-HSA-1237069",
"R-CEL-1237069",
"R-DDI-1237069",
"R-MMU-1237069",
"R-DME-1247645",
"R-ATH-1237042",
"R-OSA-1247649",
"R-HSA-1237042",
"R-DRE-1247645",
"R-HSA-1247649",
"R-MMU-1247645",
"R-DME-1237069",
"R-RNO-1237042",
"R-TGU-1247645",
"R-BTA-1237042",
"R-GGA-1237069",
"R-DME-1247649",
"R-SSC-1237069",
"R-DRE-1237069",
"R-ATH-1247649"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05467",
"rxn08237",
"rxn09706",
"rxn09821",
"rxn09775",
"rxn09876",
"rxn08238",
"rxn09860"
]
}
},
{
"id":"USHD2",
"name":"UDP-sugar hydrolase (Synechococcus elongatus 7942)",
"metabolites":{
"h2o_c":-1.0,
"h_c":2.0,
"lipidX2_c":1.0,
"u23ga2_c":-1.0,
"ump_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"USHD2"
]
},
"annotation":{
"bigg.reaction":[
"USHD2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DHNCOAT",
"name":"1,4-dihydroxy-2-napthoyl-CoA thioesterase",
"metabolites":{
"14dhncoa_c":-1.0,
"coa_c":1.0,
"dhna_c":1.0,
"h2o_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08875",
"subsystem":"Phylloquinone biosynthesis",
"notes":{
"original_bigg_ids":[
"DHNCOAT"
]
},
"annotation":{
"bigg.reaction":[
"DHNCOAT"
],
"metanetx.reaction":[
"MNXR97413"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NPHBDC",
"name":"Nonaprenyl-hydroxybenzoate decarboxylase",
"metabolites":{
"2m6sbenzq_c":1.0,
"3nphb_c":-1.0,
"ahcys_c":1.0,
"amet_c":-1.0,
"co2_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13180 and SYNPCC7942_RS10425 and SYNPCC7942_RS00685",
"subsystem":"Plastoquinol biosynthesis",
"notes":{
"original_bigg_ids":[
"NPHBDC"
]
},
"annotation":{
"bigg.reaction":[
"NPHBDC"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DM_co_c",
"name":"Modeling: demand reaction (co c)",
"metabolites":{
"co_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_co_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_co_c"
],
"sbo":"SBO:0000628"
}
},
{
"id":"HCO3E_1_cx",
"name":"Carbonic anhydrase",
"metabolites":{
"co2_cx":1.0,
"h2o_cx":1.0,
"h_cx":-1.0,
"hco3_cx":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07280 and SYNPCC7942_RS07405",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"HCO3E_1_cx"
]
},
"annotation":{
"bigg.reaction":[
"HCO3E_1_cx"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DESAT16a",
"name":"Palmitoyl ACP delta-9 desaturase",
"metabolites":{
"h2o_c":2.0,
"h_c":-1.0,
"hdeACP_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0,
"palmACP_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13015",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DESAT16a"
]
},
"annotation":{
"bigg.reaction":[
"DESAT16a"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UAGDP",
"name":"UDP-N-acetylglucosamine diphosphorylase",
"metabolites":{
"acgam1p_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0,
"uacgam_c":1.0,
"utp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01465",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UAGDP"
]
},
"annotation":{
"bigg.reaction":[
"UAGDP"
],
"ec-code":[
"2.7.7.23"
],
"metanetx.reaction":[
"MNXR105033"
],
"reactome.reaction":[
"R-CFA-446204",
"R-DME-446204",
"R-HSA-446204",
"R-PFA-446204",
"R-XTR-446204",
"R-ATH-446204",
"R-OSA-446204",
"R-TGU-446204",
"R-DDI-446204",
"R-SCE-446204",
"R-GGA-446204",
"R-SSC-446204",
"R-DRE-446204",
"R-MMU-446204",
"R-RNO-446204",
"R-CEL-446204",
"R-SPO-446204",
"R-BTA-446204"
],
"sabiork":[
"870"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00293"
]
}
},
{
"id":"BIOMASS_CARB",
"name":"Biomass: carbohydrates (storage and misc.)",
"metabolites":{
"14glucan_c":-4.382,
"bm_carbs_c":1.0,
"glycogen_c":-0.8764
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"BIOMASS_CARB"
]
},
"annotation":{
"bigg.reaction":[
"BIOMASS_CARB"
],
"sbo":"SBO:0000629"
}
},
{
"id":"EX_fe2_e",
"name":"Fe2+ exchange",
"metabolites":{
"fe2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_fe2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_fe2_e"
],
"biocyc":[
"META:TRANS-RXN-8"
],
"metanetx.reaction":[
"MNXR99505"
],
"rhea":[
"28488",
"28487",
"28489",
"28486"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08476",
"rxn08475",
"rxn13286",
"rxn10963"
]
}
},
{
"id":"PQH2tcm",
"name":"Plastoquinine insertion into the cytoplasmic membrane",
"metabolites":{
"pqh2_c":-1.0,
"pqh2_cm":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"PQH2tcm"
]
},
"annotation":{
"bigg.reaction":[
"PQH2tcm"
],
"sbo":"SBO:0000185"
}
},
{
"id":"2PGLYCtcx",
"name":"2-phosphoglycolate transport out of the carboxyzome",
"metabolites":{
"2pglyc_c":1.0,
"2pglyc_cx":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: carboxyzome",
"notes":{
"original_bigg_ids":[
"2PGLYCtcx"
]
},
"annotation":{
"bigg.reaction":[
"2PGLYCtcx"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PDS1_1",
"name":"Phytoene dehydrogenase",
"metabolites":{
"h_c":1.0,
"nadp_c":-1.0,
"nadph_c":1.0,
"phytfl_c":1.0,
"phyto_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10055",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"PDS1"
]
},
"annotation":{
"bigg.reaction":[
"PDS1_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_cu2_e",
"name":"Cu2+ exchange",
"metabolites":{
"cu2_e":-1.0
},
"lower_bound":-3e-05,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_cu2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_cu2_e"
],
"biocyc":[
"META:RXN0-14"
],
"metanetx.reaction":[
"MNXR96951"
],
"reactome.reaction":[
"R-HSA-437300",
"R-DME-437300",
"R-RNO-437300",
"R-SCE-437300",
"R-DRE-437300",
"R-XTR-437300",
"R-TGU-437300",
"R-BTA-437300",
"R-CFA-437300",
"R-SSC-437300",
"R-MMU-437300",
"R-GGA-437300"
],
"rhea":[
"28705",
"28706",
"28704",
"28703"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08274",
"rxn05212",
"rxn08273"
]
}
},
{
"id":"FRTT",
"name":"Farnesyltranstransferase",
"metabolites":{
"frdp_c":-1.0,
"ggdp_c":1.0,
"ipdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04025",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"FRTT"
]
},
"annotation":{
"bigg.reaction":[
"FRTT"
],
"biocyc":[
"META:FARNESYLTRANSTRANSFERASE-RXN"
],
"ec-code":[
"2.5.1.29"
],
"kegg.reaction":[
"R02061"
],
"metanetx.reaction":[
"MNXR99650"
],
"rhea":[
"17656",
"17653",
"17654",
"17655"
],
"sabiork":[
"2078"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01486"
]
}
},
{
"id":"3OAS180",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C18:0)",
"metabolites":{
"3ooctdACP_c":1.0,
"ACP_c":1.0,
"co2_c":1.0,
"h_c":-1.0,
"malACP_c":-1.0,
"palmACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS180"
]
},
"annotation":{
"bigg.reaction":[
"3OAS180"
],
"ec-code":[
"2.3.1.41"
],
"metanetx.reaction":[
"MNXR94961"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR80y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C8:0)",
"metabolites":{
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"ocACP_c":1.0,
"toct2eACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR80y"
]
},
"annotation":{
"bigg.reaction":[
"EAR80y"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR97868"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DM_5drib_c",
"name":"Sink needed to allow 5'-deoxyribose to leave system",
"metabolites":{
"5drib_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_5drib_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_5drib_c"
],
"metanetx.reaction":[
"MNXR142736"
],
"sbo":"SBO:0000628"
}
},
{
"id":"SK_amylose_c",
"name":"Modeling: sink reaction (amylose c)",
"metabolites":{
"amylose_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular source/sink",
"notes":{
"original_bigg_ids":[
"SK_amylose_c"
]
},
"annotation":{
"bigg.reaction":[
"SK_amylose_c"
],
"sbo":"SBO:0000632"
}
},
{
"id":"EAR140y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C14:0)",
"metabolites":{
"h_c":-1.0,
"myrsACP_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"tmrs2eACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR140y"
]
},
"annotation":{
"bigg.reaction":[
"EAR140y"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR97852"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_k_e",
"name":"K+ exchange",
"metabolites":{
"k_e":-1.0
},
"lower_bound":-0.046,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_k_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_k_e"
],
"biocyc":[
"META:TRANS-RXN-190",
"META:TRANS-RXN-186",
"META:TRANS-RXN-185",
"META:TRANS-RXN-143",
"META:TRANS-RXN-187"
],
"metanetx.reaction":[
"MNXR100950"
],
"reactome.reaction":[
"R-CEL-1296046",
"R-CFA-1299297",
"R-DRE-1296127",
"R-CEL-1296035",
"R-GGA-1299318",
"R-XTR-1296046",
"R-RNO-5678261",
"R-ATH-1296043",
"R-MMU-877187",
"R-SSC-1296037",
"R-BTA-1299359",
"R-TGU-1296024",
"R-TGU-1296127",
"R-TGU-5678261",
"R-RNO-1296348",
"R-DME-5577234",
"R-RNO-1299297",
"R-HSA-5577050",
"R-DRE-1296037",
"R-DRE-1296024",
"R-XTR-5577050",
"R-MMU-1296348",
"R-RNO-5578910",
"R-DRE-5578910",
"R-RNO-1296024",
"R-CFA-1369017",
"R-TGU-1296348",
"R-RNO-2534365",
"R-GGA-1296045",
"R-CFA-5678261",
"R-XTR-1369017",
"R-DRE-1296043",
"R-GGA-1013020",
"R-HSA-5577234",
"R-CEL-1299338",
"R-CFA-1296043",
"R-BTA-1296127",
"R-HSA-5578910",
"R-BTA-1299338",
"R-BTA-1299318",
"R-RNO-5577237",
"R-HSA-1299359",
"R-CEL-1299318",
"R-HSA-1299318",
"R-DRE-1299304",
"R-MMU-1013020",
"R-XTR-1296039",
"R-TGU-1296045",
"R-BTA-1296045",
"R-XTR-1296037",
"R-SSC-5678261",
"R-MMU-1299297",
"R-DME-1296348",
"R-HSA-5683209",
"R-BTA-5578910",
"R-CFA-1296046",
"R-DME-1296035",
"R-CFA-1299359",
"R-HSA-1296043",
"R-DRE-1296039",
"R-GGA-1296348",
"R-XTR-1296043",
"R-SSC-2534365",
"R-XTR-5678261",
"R-CEL-1013020",
"R-GGA-1296127",
"R-MMU-1296039",
"R-HSA-1299304",
"R-BTA-1299304",
"R-DME-1296043",
"R-BTA-1296024",
"R-RNO-1296037",
"R-CFA-1296024",
"R-CFA-1013020",
"R-HSA-1296046",
"R-CFA-1296037",
"R-CEL-1299297",
"R-BTA-5577237",
"R-DME-1296039",
"R-TGU-1299359",
"R-CFA-1296127",
"R-HSA-1369017",
"R-RNO-1296046",
"R-XTR-1299338",
"R-DRE-5678261",
"R-XTR-5577234",
"R-HSA-1296024",
"R-RNO-1296045",
"R-GGA-5578910",
"R-DRE-1299338",
"R-GGA-1296046",
"R-RNO-1369017",
"R-CEL-1296045",
"R-DRE-5577050",
"R-DRE-1013020",
"R-BTA-1299297",
"R-SSC-1299338",
"R-SSC-1369017",
"R-GGA-5577050",
"R-CEL-1299359",
"R-BTA-5678261",
"R-BTA-1296043",
"R-RNO-1296127",
"R-OSA-1296043",
"R-CFA-5577050",
"R-CFA-5577234",
"R-SSC-1296045",
"R-MMU-1299304",
"R-MMU-1369017",
"R-SSC-1299304",
"R-MMU-1296035",
"R-HSA-1296035",
"R-TGU-1296037",
"R-GGA-1296039",
"R-SSC-5578910",
"R-GGA-1296024",
"R-CFA-1299304",
"R-GGA-5577234",
"R-RNO-1299338",
"R-DME-1296127",
"R-HSA-877187",
"R-DRE-1369017",
"R-HSA-1296348",
"R-BTA-1296348",
"R-MMU-1296043",
"R-RNO-1013020",
"R-MMU-1296127",
"R-RNO-5577050",
"R-CFA-1296045",
"R-BTA-1296039",
"R-RNO-5577234",
"R-TGU-1299338",
"R-RNO-1296039",
"R-TGU-1296039",
"R-XTR-1296127",
"R-SSC-1296039",
"R-DME-1296046",
"R-MMU-1299359",
"R-CEL-1296348",
"R-BTA-1296046",
"R-RNO-1299318",
"R-MMU-1299338",
"R-DRE-877187",
"R-MMU-5577050",
"R-BTA-1296037",
"R-RNO-1299359",
"R-GGA-1296043",
"R-DME-1013020",
"R-HSA-1299338",
"R-XTR-1296348",
"R-XTR-1299318",
"R-GGA-1299338",
"R-DRE-5577234",
"R-SSC-1296046",
"R-XTR-5578910",
"R-CFA-1296035",
"R-CFA-1296348",
"R-CFA-5577237",
"R-SSC-1296024",
"R-CEL-5577234",
"R-CFA-5578910",
"R-DRE-1296035",
"R-SSC-1296043",
"R-CFA-1299338",
"R-GGA-877187",
"R-HSA-5678261",
"R-CFA-2534365",
"R-HSA-1296127",
"R-HSA-1013020",
"R-BTA-5577234",
"R-DRE-1296348",
"R-MMU-1296024",
"R-BTA-1296035",
"R-DME-1299318",
"R-MMU-1296037",
"R-DRE-1296045",
"R-DRE-5577237",
"R-TGU-5577234",
"R-SSC-1299359",
"R-MMU-5578910",
"R-SSC-1013020",
"R-MMU-1296045",
"R-HSA-1296045",
"R-XTR-1296045",
"R-TGU-1299304",
"R-RNO-877187",
"R-MMU-2534365",
"R-CFA-877187",
"R-DRE-1296046",
"R-DRE-1299359",
"R-TGU-1296046",
"R-DME-1299338",
"R-TGU-5578910",
"R-RNO-1296035",
"R-SSC-1296348",
"R-XTR-1299359",
"R-MMU-5678261",
"R-SSC-1296127",
"R-BTA-1013020",
"R-CEL-5578910",
"R-GGA-1296037",
"R-GGA-5577237",
"R-XTR-1299304",
"R-GGA-5678261",
"R-SSC-1299297",
"R-MMU-1296046",
"R-TGU-5577050",
"R-DME-5578910",
"R-BTA-5577050",
"R-RNO-1299304",
"R-TGU-1013020",
"R-GGA-1299359",
"R-XTR-1013020",
"R-MMU-5577234",
"R-MMU-5577237",
"R-TGU-1369017",
"R-RNO-1296043",
"R-TGU-1296043",
"R-XTR-1296035",
"R-HSA-1296037",
"R-SSC-1296035",
"R-SSC-877187",
"R-CFA-1299318",
"R-DME-1296045",
"R-GGA-1296035",
"R-HSA-1299297",
"R-CFA-1296039",
"R-BTA-2534365",
"R-DME-1299359",
"R-BTA-877187",
"R-HSA-2534365",
"R-GGA-1369017",
"R-XTR-5577237",
"R-HSA-5577237",
"R-SSC-5577234",
"R-HSA-1296039",
"R-CEL-1296039",
"R-XTR-877187",
"R-SSC-5577237",
"R-DRE-1299318",
"R-GGA-1299304",
"R-BTA-1369017",
"R-MMU-1299318"
],
"rhea":[
"29463",
"29464",
"29466",
"29465"
],
"sabiork":[
"7044"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn05206",
"rxn08771"
]
}
},
{
"id":"ACGS",
"name":"N-acetylglutamate synthase",
"metabolites":{
"accoa_c":-1.0,
"acglu_c":1.0,
"coa_c":1.0,
"glu__L_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09615",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ACGS"
]
},
"annotation":{
"bigg.reaction":[
"ACGS"
],
"biocyc":[
"META:N-ACETYLTRANSFER-RXN"
],
"ec-code":[
"2.3.1.1"
],
"kegg.reaction":[
"R00259"
],
"metanetx.reaction":[
"MNXR95259"
],
"reactome.reaction":[
"R-HSA-70542",
"R-SPO-70542",
"R-XTR-70542",
"R-SSC-70542",
"R-DRE-70542",
"R-DDI-70542",
"R-MMU-70542",
"R-SCE-70542",
"R-BTA-70542",
"R-CFA-70542",
"R-RNO-70542"
],
"rhea":[
"24295",
"24292",
"24293",
"24294"
],
"sabiork":[
"764"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00192"
]
}
},
{
"id":"CYTBD4um",
"name":"Cytochrome bd oxidase (plastoquinone utilizing, non-proton translocating)",
"metabolites":{
"h2o_c":2.0,
"h_c":-4.0,
"h_u":4.0,
"o2_c":-1.0,
"pq_um":2.0,
"pqh2_um":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08975 and SYNPCC7942_RS08980",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"CYTBD4um"
]
},
"annotation":{
"bigg.reaction":[
"CYTBD4um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"DHPPDA",
"name":"Diaminohydroxyphosphoribosylaminopyrimidine deaminase",
"metabolites":{
"25dhpp_c":-1.0,
"5apru_c":1.0,
"h2o_c":-1.0,
"h_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01030",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"DHPPDA"
]
},
"annotation":{
"bigg.reaction":[
"DHPPDA"
],
"metanetx.reaction":[
"MNXR97430"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DHFR",
"name":"Dihydrofolate reductase",
"metabolites":{
"dhf_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06075",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"DHFR"
]
},
"annotation":{
"bigg.reaction":[
"DHFR"
],
"ec-code":[
"1.5.1.3"
],
"kegg.reaction":[
"R00939"
],
"metanetx.reaction":[
"MNXR97401"
],
"reactome.reaction":[
"R-SCE-197972",
"R-HSA-197972",
"R-RNO-197972",
"R-CEL-197972",
"R-TGU-197972",
"R-XTR-197972",
"R-SPO-197972",
"R-SSC-197972",
"R-CFA-197972",
"R-GGA-197972",
"R-BTA-197972",
"R-DRE-197972",
"R-DDI-197972",
"R-MMU-197972",
"R-DME-197972"
],
"rhea":[
"15010",
"15009",
"15012",
"15011"
],
"sabiork":[
"100"
],
"sbo":"SBO:0000176"
}
},
{
"id":"BCAROHX",
"name":"Beta-carotene hydroxylase",
"metabolites":{
"bcryptox_c":1.0,
"caro_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12395",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"BCAROHX"
]
},
"annotation":{
"bigg.reaction":[
"BCAROHX"
],
"metanetx.reaction":[
"MNXR96218"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SK_14glucan_c",
"name":"Modeling: sink reaction (14glucan c)",
"metabolites":{
"14glucan_c":-1.0
},
"lower_bound":0.0,
"upper_bound":0.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular source/sink",
"notes":{
"original_bigg_ids":[
"SK_14glucan_c"
]
},
"annotation":{
"bigg.reaction":[
"SK_14glucan_c"
],
"sbo":"SBO:0000632"
}
},
{
"id":"SK_glycogen_c",
"name":"Modeling: sink reaction (glycogen c)",
"metabolites":{
"glycogen_c":-1.0
},
"lower_bound":0.0,
"upper_bound":0.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular source/sink",
"notes":{
"original_bigg_ids":[
"SK_glycogen_c"
]
},
"annotation":{
"bigg.reaction":[
"SK_glycogen_c"
],
"sbo":"SBO:0000632"
}
},
{
"id":"EX_h2o_e",
"name":"H2O exchange",
"metabolites":{
"h2o_e":-1.0
},
"lower_bound":-100.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_h2o_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_h2o_e"
],
"biocyc":[
"META:TRANS-RXN-145",
"META:TRANS-RXN0-547"
],
"metanetx.reaction":[
"MNXR98641"
],
"reactome.reaction":[
"R-ATH-507868",
"R-CFA-432054",
"R-CFA-432010",
"R-RNO-507868",
"R-OSA-432065",
"R-GGA-432010",
"R-SPO-445714",
"R-PFA-445714",
"R-CFA-432065",
"R-GGA-432067",
"R-TGU-432054",
"R-TGU-445714",
"R-OSA-507868",
"R-DRE-507868",
"R-SPO-507868",
"R-BTA-432054",
"R-GGA-507870",
"R-OSA-432010",
"R-DME-432065",
"R-DRE-432067",
"R-PFA-507868",
"R-SSC-432054",
"R-HSA-432065",
"R-OSA-507870",
"R-HSA-432054",
"R-SSC-432065",
"R-CEL-507868",
"R-XTR-507868",
"R-ATH-507870",
"R-SCE-432065",
"R-BTA-507870",
"R-DME-432010",
"R-CFA-445714",
"R-DRE-445714",
"R-BTA-507868",
"R-GGA-507868",
"R-RNO-432054",
"R-RNO-432010",
"R-SSC-432067",
"R-CEL-445714",
"R-DDI-432065",
"R-ATH-432010",
"R-SCE-432054",
"R-MMU-432065",
"R-MMU-445714",
"R-GGA-432065",
"R-HSA-432067",
"R-SSC-507870",
"R-SCE-432067",
"R-RNO-507870",
"R-DME-432054",
"R-ATH-432067",
"R-BTA-445714",
"R-DRE-507870",
"R-DME-507868",
"R-DME-507870",
"R-DRE-432010",
"R-MMU-432010",
"R-HSA-445714",
"R-OSA-432054",
"R-RNO-432067",
"R-TGU-432010",
"R-TGU-507868",
"R-DDI-432054",
"R-PFA-507870",
"R-HSA-507870",
"R-XTR-432067",
"R-HSA-432010",
"R-SSC-507868",
"R-SCE-507870",
"R-CEL-507870",
"R-DDI-507868",
"R-DRE-432054",
"R-XTR-507870",
"R-DDI-432010",
"R-BTA-432065",
"R-CFA-432067",
"R-OSA-432067",
"R-ATH-432065",
"R-GGA-445714",
"R-SCE-507868",
"R-TGU-432065",
"R-MMU-432067",
"R-TGU-507870",
"R-CFA-507870",
"R-RNO-432065",
"R-MMU-432054",
"R-MMU-507868",
"R-SPO-507870",
"R-SCE-432010",
"R-MMU-507870",
"R-SSC-445714",
"R-HSA-507868",
"R-DME-432067",
"R-SSC-432010",
"R-TGU-432067",
"R-GGA-432054",
"R-BTA-432010",
"R-SCE-445714",
"R-DDI-507870",
"R-ATH-432054",
"R-DDI-432067",
"R-XTR-445714",
"R-BTA-432067",
"R-CFA-507868",
"R-RNO-445714"
],
"rhea":[
"29668",
"29669",
"29667",
"29670"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08687",
"rxn08686",
"rxn09745",
"rxn09838",
"rxn09874",
"rxn09812",
"rxn09643",
"rxn05319"
]
}
},
{
"id":"EX_o2_e",
"name":"O2 exchange",
"metabolites":{
"o2_e":-1.0
},
"lower_bound":-100.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_o2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_o2_e"
],
"biocyc":[
"META:TRANS-RXN0-474"
],
"metanetx.reaction":[
"MNXR102090"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn09641",
"rxn05468",
"rxn09031",
"rxn09032",
"rxn09734"
]
}
},
{
"id":"EX_co2_e",
"name":"CO2 exchange",
"metabolites":{
"co2_e":-1.0
},
"lower_bound":-1.99,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_co2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_co2_e"
],
"biocyc":[
"META:TRANS-RXN0-545"
],
"metanetx.reaction":[
"MNXR96810"
],
"reactome.reaction":[
"R-DDI-1247645",
"R-CFA-1237069",
"R-TGU-1247649",
"R-CFA-1237042",
"R-CEL-1247645",
"R-XTR-1237069",
"R-HSA-1247645",
"R-OSA-1237042",
"R-GGA-1237042",
"R-BTA-1247645",
"R-GGA-1247649",
"R-RNO-1247645",
"R-XTR-1247645",
"R-TGU-1237042",
"R-SCE-1247649",
"R-MMU-1247649",
"R-CFA-1247649",
"R-GGA-1247645",
"R-SSC-1247645",
"R-BTA-1237069",
"R-RNO-1237069",
"R-SCE-1237042",
"R-DDI-1247649",
"R-SSC-1237042",
"R-DRE-1247649",
"R-DRE-1237042",
"R-DDI-1237042",
"R-DME-1237042",
"R-MMU-1237042",
"R-SSC-1247649",
"R-TGU-1237069",
"R-BTA-1247649",
"R-CFA-1247645",
"R-RNO-1247649",
"R-HSA-1237069",
"R-CEL-1237069",
"R-DDI-1237069",
"R-MMU-1237069",
"R-DME-1247645",
"R-ATH-1237042",
"R-OSA-1247649",
"R-HSA-1237042",
"R-DRE-1247645",
"R-HSA-1247649",
"R-MMU-1247645",
"R-DME-1237069",
"R-RNO-1237042",
"R-TGU-1247645",
"R-BTA-1237042",
"R-GGA-1237069",
"R-DME-1247649",
"R-SSC-1237069",
"R-DRE-1237069",
"R-ATH-1247649"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn05467",
"rxn08237",
"rxn09706",
"rxn09821",
"rxn09775",
"rxn09876",
"rxn08238",
"rxn09860"
]
}
},
{
"id":"EX_leu__L_e",
"name":"L-Leucine exchange",
"metabolites":{
"leu__L_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_leu__L_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_leu__L_e"
],
"biocyc":[
"META:RXN66-447"
],
"metanetx.reaction":[
"MNXR101057"
],
"sabiork":[
"13056"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08786",
"rxn11003"
]
}
},
{
"id":"MPOMC1_1",
"name":"Magnesium-protoporphyrin-IX 13-monomethyl ester,NADPH oxygen oxidoreductase (hydroxylating)",
"metabolites":{
"h2o_c":1.0,
"h_c":-1.0,
"hmppp9_c":1.0,
"mppp9me_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09670",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"MPOMC1"
]
},
"annotation":{
"bigg.reaction":[
"MPOMC1_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ERTHMMOR",
"name":"D-erythro-3-methylmalate: NAD oxidoreductase",
"metabolites":{
"2obut_c":1.0,
"co2_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"r3mmal_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07690",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"ERTHMMOR"
]
},
"annotation":{
"bigg.reaction":[
"ERTHMMOR"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_cobalt2_e",
"name":"Co2+ exchange",
"metabolites":{
"cobalt2_e":-1.0
},
"lower_bound":-1.7e-05,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_cobalt2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_cobalt2_e"
],
"biocyc":[
"META:TRANS-RXN-141A"
],
"metanetx.reaction":[
"MNXR96821"
],
"rhea":[
"28579",
"28580",
"28581",
"28578"
],
"sabiork":[
"12148"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08241",
"rxn08242",
"rxn10474"
]
}
},
{
"id":"EX_no3_e",
"name":"Nitrate exchange",
"metabolites":{
"no3_e":-1.0
},
"lower_bound":-1.76,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_no3_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_no3_e"
],
"metanetx.reaction":[
"MNXR101992"
],
"rhea":[
"34924",
"34926",
"34923",
"34925"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn09005",
"rxn10935"
]
}
},
{
"id":"EX_zn2_e",
"name":"Zinc exchange",
"metabolites":{
"zn2_e":-1.0
},
"lower_bound":-7.7e-05,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_zn2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_zn2_e"
],
"biocyc":[
"META:RXN0-12"
],
"metanetx.reaction":[
"MNXR105280"
],
"reactome.reaction":[
"R-RNO-442359",
"R-TGU-437085",
"R-TGU-437139",
"R-DRE-442393",
"R-HSA-437084",
"R-PFA-437136",
"R-CFA-442422",
"R-BTA-437139",
"R-SSC-442393",
"R-HSA-437129",
"R-XTR-435366",
"R-RNO-442422",
"R-RNO-437136",
"R-SCE-437085",
"R-DME-442422",
"R-DDI-442422",
"R-MMU-435366",
"R-RNO-442317",
"R-DDI-437136",
"R-CEL-442393",
"R-SSC-437139",
"R-CEL-442422",
"R-ATH-437085",
"R-MMU-437136",
"R-MMU-442317",
"R-DRE-442422",
"R-MMU-437139",
"R-SPO-435366",
"R-DME-437136",
"R-OSA-442393",
"R-XTR-437085",
"R-OSA-442422",
"R-CEL-435366",
"R-DRE-442317",
"R-BTA-442317",
"R-DDI-435366",
"R-SSC-442422",
"R-HSA-442387",
"R-HSA-437139",
"R-SCE-435366",
"R-MMU-437085",
"R-ATH-442422",
"R-HSA-442405",
"R-GGA-435366",
"R-CEL-442317",
"R-SSC-442317",
"R-DRE-442387",
"R-DRE-437085",
"R-MMU-437092",
"R-SCE-442422",
"R-CFA-442393",
"R-BTA-442393",
"R-SSC-437136",
"R-TGU-442422",
"R-BTA-442387",
"R-OSA-437085",
"R-RNO-442393",
"R-SCE-442393",
"R-RNO-437139",
"R-SSC-437085",
"R-XTR-442317",
"R-XTR-442393",
"R-GGA-437136",
"R-SCE-437136",
"R-XTR-437136",
"R-HSA-437085",
"R-ATH-442393",
"R-XTR-437139",
"R-BTA-437085",
"R-GGA-442317",
"R-GGA-437085",
"R-CEL-442387",
"R-SSC-435366",
"R-TGU-442387",
"R-SCE-437139",
"R-CEL-437136",
"R-MMU-442387",
"R-MMU-442422",
"R-BTA-442422",
"R-RNO-435366",
"R-RNO-442387",
"R-CFA-437085",
"R-DME-442317",
"R-HSA-435366",
"R-DRE-437139",
"R-TGU-437136",
"R-TGU-435366",
"R-SCE-442387",
"R-HSA-442422",
"R-ATH-437136",
"R-HSA-442317",
"R-HSA-442393",
"R-CEL-437139",
"R-HSA-442345",
"R-GGA-442387",
"R-CFA-442317",
"R-GGA-442422",
"R-DRE-437136",
"R-MMU-442319",
"R-MMU-442393",
"R-GGA-437139",
"R-OSA-437136",
"R-BTA-435366",
"R-CEL-437085",
"R-XTR-442387",
"R-SSC-442387",
"R-DRE-435366",
"R-DDI-437085",
"R-MMU-437145",
"R-CFA-442387",
"R-SPO-442393",
"R-TGU-442317",
"R-DME-442393",
"R-XTR-442422",
"R-SCE-442317",
"R-SPO-437085",
"R-CFA-435366",
"R-RNO-437085",
"R-CFA-437139",
"R-HSA-435375",
"R-RNO-437094",
"R-CFA-437136",
"R-HSA-437136",
"R-DME-435366"
],
"rhea":[
"29353",
"29351",
"29352",
"29354"
],
"sabiork":[
"13042"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn09391",
"rxn09390"
]
}
},
{
"id":"EX_fe3_e",
"name":"Fe3+ exchange",
"metabolites":{
"fe3_e":-1.0
},
"lower_bound":-0.001,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_fe3_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_fe3_e"
],
"metanetx.reaction":[
"MNXR99522"
],
"reactome.reaction":[
"R-RNO-442368",
"R-HSA-442368",
"R-BTA-442368",
"R-SSC-442368",
"R-MMU-442368",
"R-CFA-442368",
"R-GGA-442368",
"R-TGU-442368"
],
"rhea":[
"34973",
"34972",
"34974",
"34971"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn05292",
"rxn08492"
]
}
},
{
"id":"EX_so4_e",
"name":"Sulfate exchange",
"metabolites":{
"so4_e":-1.0
},
"lower_bound":-0.03,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_so4_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_so4_e"
],
"metanetx.reaction":[
"MNXR104469"
],
"reactome.reaction":[
"R-TGU-8875871",
"R-DRE-8875871",
"R-GGA-8875871",
"R-BTA-8875871",
"R-SCE-8875871",
"R-HSA-8875871",
"R-SPO-8875871",
"R-XTR-8875871",
"R-MMU-8875871",
"R-RNO-8875871",
"R-SSC-8875871",
"R-PFA-8875871",
"R-ATH-8875871",
"R-CFA-8875871",
"R-OSA-8875871",
"R-DME-8875871"
],
"rhea":[
"34983",
"34984",
"34986",
"34985"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn09261",
"rxn05238"
]
}
},
{
"id":"AFAT",
"name":"ATP:FMN adenylyltransferase",
"metabolites":{
"atp_c":-1.0,
"fad_c":1.0,
"fmn_c":-1.0,
"h_c":-2.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02505",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"AFAT"
]
},
"annotation":{
"bigg.reaction":[
"AFAT"
],
"biocyc":[
"META:FADSYN-RXN"
],
"ec-code":[
"2.7.7.2"
],
"kegg.reaction":[
"R00161"
],
"metanetx.reaction":[
"MNXR95501"
],
"reactome.reaction":[
"R-XTR-196929",
"R-ATH-196929",
"R-GGA-196929",
"R-SSC-196929",
"R-DRE-196929",
"R-HSA-196929",
"R-RNO-196929",
"R-SCE-196929",
"R-CEL-196929",
"R-DDI-196929",
"R-BTA-196929",
"R-MMU-196929",
"R-DME-196929",
"R-SPO-196929",
"R-TGU-196929",
"R-PFA-196929",
"R-CFA-196929"
],
"rhea":[
"17239",
"17240",
"17238",
"17237"
],
"sabiork":[
"390"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00122"
]
}
},
{
"id":"EX_spmd_e",
"name":"Spermidine exchange",
"metabolites":{
"spmd_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_spmd_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_spmd_e"
],
"metanetx.reaction":[
"MNXR104495"
],
"rhea":[
"35040",
"35039",
"35042",
"35041"
],
"sabiork":[
"13767"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn13397",
"rxn09266"
]
}
},
{
"id":"EX_mobd_e",
"name":"Molybdate exchange",
"metabolites":{
"mobd_e":-1.0
},
"lower_bound":-0.00016,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_mobd_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_mobd_e"
],
"metanetx.reaction":[
"MNXR101690"
],
"rhea":[
"34909",
"34907",
"34910",
"34908"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08956"
]
}
},
{
"id":"DADK",
"name":"Deoxyadenylate kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dadp_c":1.0,
"damp_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11240",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"DADK"
]
},
"annotation":{
"bigg.reaction":[
"DADK"
],
"biocyc":[
"META:DEOXYADENYLATE-KINASE-RXN"
],
"ec-code":[
"2.7.4.11",
"2.7.4.13",
"2.7.4.3"
],
"kegg.reaction":[
"R01547"
],
"metanetx.reaction":[
"MNXR96117"
],
"reactome.reaction":[
"R-DME-74220",
"R-BTA-74220",
"R-MMU-110141",
"R-PFA-74220",
"R-TGU-110141",
"R-SCE-74220",
"R-HSA-110141",
"R-XTR-110141",
"R-CFA-110141",
"R-CEL-110141",
"R-HSA-74220",
"R-BTA-110141",
"R-CFA-74220",
"R-SSC-110141",
"R-CEL-74220",
"R-DRE-74220",
"R-SCE-110141",
"R-DRE-110141",
"R-GGA-110141",
"R-RNO-110141",
"R-SSC-74220",
"R-DME-110141",
"R-MMU-74220",
"R-PFA-110141",
"R-XTR-74220",
"R-TGU-74220",
"R-GGA-74220",
"R-RNO-74220"
],
"rhea":[
"23100",
"23103",
"23102",
"23101"
],
"sabiork":[
"314"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01127"
]
}
},
{
"id":"G1SAT",
"name":"Glutamate-1-semialdehyde aminotransferase",
"metabolites":{
"5aop_c":1.0,
"glu1sa_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03310",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"G1SAT"
]
},
"annotation":{
"bigg.reaction":[
"G1SAT"
],
"biocyc":[
"META:GSAAMINOTRANS-RXN"
],
"ec-code":[
"5.4.3.8"
],
"kegg.reaction":[
"R02272"
],
"metanetx.reaction":[
"MNXR99850"
],
"rhea":[
"14265",
"14267",
"14268",
"14266"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01629"
]
}
},
{
"id":"EX_ni2_e",
"name":"Ni2+ exchange",
"metabolites":{
"ni2_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_ni2_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_ni2_e"
],
"biocyc":[
"META:TRANS-RXN-141B"
],
"metanetx.reaction":[
"MNXR101958"
],
"rhea":[
"29833",
"29831",
"29834",
"29832"
],
"sbo":"SBO:0000627"
}
},
{
"id":"UAAGDS",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelate synthetase",
"metabolites":{
"26dap__M_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"uamag_c":-1.0,
"ugmd_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07585",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UAAGDS"
]
},
"annotation":{
"bigg.reaction":[
"UAAGDS"
],
"ec-code":[
"6.3.2.13"
],
"metanetx.reaction":[
"MNXR105013"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HEX1",
"name":"Hexokinase (D-glucose:ATP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"g6p_c":1.0,
"glc__D_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01125",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"HEX1"
]
},
"annotation":{
"bigg.reaction":[
"HEX1"
],
"biocyc":[
"META:GLUCOKIN-RXN"
],
"ec-code":[
"2.7.1.1",
"2.7.1.2"
],
"kegg.reaction":[
"R00299"
],
"metanetx.reaction":[
"MNXR100612"
],
"rhea":[
"17827",
"17828",
"17826",
"17825"
],
"sabiork":[
"9175",
"793",
"6915"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00216"
]
}
},
{
"id":"URIDK2r",
"name":"Uridylate kinase (dUMP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dudp_c":1.0,
"dump_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00470",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"URIDK2r"
]
},
"annotation":{
"bigg.reaction":[
"URIDK2r"
],
"biocyc":[
"META:RXN-14122"
],
"ec-code":[
"2.7.4.13",
"2.7.4.4",
"2.7.4.9"
],
"kegg.reaction":[
"R02098"
],
"metanetx.reaction":[
"MNXR105160"
],
"rhea":[
"30658",
"30655",
"30656",
"30657"
],
"sabiork":[
"499"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01517"
]
}
},
{
"id":"CHPHYS",
"name":"Chlorophyll a synthase",
"metabolites":{
"chlld_c":-1.0,
"cholphya_c":1.0,
"h_c":-1.0,
"phdp_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10565",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"CHPHYS"
]
},
"annotation":{
"bigg.reaction":[
"CHPHYS"
],
"biocyc":[
"META:RXN1F-66"
],
"ec-code":[
"2.5.1.62"
],
"metanetx.reaction":[
"MNXR96676"
],
"rhea":[
"17320",
"17318",
"17317",
"17319"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_na1_e",
"name":"Sodium exchange",
"metabolites":{
"na1_e":-1.0
},
"lower_bound":-1.79854,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_na1_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_na1_e"
],
"biocyc":[
"META:TRANS-RXN-189"
],
"metanetx.reaction":[
"MNXR101804"
],
"reactome.reaction":[
"R-TGU-2671885",
"R-MMU-3295580",
"R-GGA-5576895",
"R-GGA-2672334",
"R-BTA-2672334",
"R-DRE-2671885",
"R-MMU-2730664",
"R-BTA-3295580",
"R-BTA-2730664",
"R-CFA-3295580",
"R-XTR-2672334",
"R-RNO-2671885",
"R-HSA-2671885",
"R-RNO-2730664",
"R-SSC-2671885",
"R-HSA-3295580",
"R-SSC-2672334",
"R-TGU-2672334",
"R-DRE-5576895",
"R-CEL-2730664",
"R-HSA-5576895",
"R-MMU-2672334",
"R-BTA-5576895",
"R-TGU-2730664",
"R-CFA-2672334",
"R-HSA-2730664",
"R-CFA-5576895",
"R-XTR-2671885",
"R-XTR-5576895",
"R-CFA-2730664",
"R-DME-2730664",
"R-XTR-3295580",
"R-GGA-3295580",
"R-BTA-2671885",
"R-DRE-3295580",
"R-MMU-2671885",
"R-SSC-3295580",
"R-CEL-3295580",
"R-GGA-2671885",
"R-GGA-2730664",
"R-HSA-2672334",
"R-SSC-5576895",
"R-CEL-2671885",
"R-DME-3295580",
"R-RNO-2672334",
"R-RNO-3295580",
"R-MMU-5576895",
"R-RNO-5576895",
"R-TGU-3295580",
"R-XTR-2730664",
"R-CFA-2671885"
],
"rhea":[
"34963",
"34966",
"34965",
"34964"
],
"sabiork":[
"12962"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08985",
"rxn10899"
]
}
},
{
"id":"PIuabcpp",
"name":"Phosphate transport via ABC system (uptake, periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":2.0,
"pi_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12405 and SYNPCC7942_RS12410 and SYNPCC7942_RS12415 and SYNPCC7942_RS12420 and SYNPCC7942_RS12425",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"PIuabcpp"
]
},
"annotation":{
"bigg.reaction":[
"PIuabcpp"
],
"biocyc":[
"META:ABC-27-RXN"
],
"ec-code":[
"3.6.3.27"
],
"metanetx.reaction":[
"MNXR102870"
],
"rhea":[
"24441#1",
"24442#1",
"24443#1",
"24440#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05145",
"rxn09122"
]
}
},
{
"id":"ARGDHpp",
"name":"L-arginine oxidoreductase",
"metabolites":{
"5g2oxpt_p":1.0,
"arg__L_p":-1.0,
"h2o2_p":1.0,
"h2o_p":-1.0,
"nh4_p":1.0,
"o2_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04865",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ARGDHpp"
]
},
"annotation":{
"bigg.reaction":[
"ARGDHpp"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PHETA1",
"name":"Phenylalanine transaminase",
"metabolites":{
"akg_c":-1.0,
"glu__L_c":1.0,
"phe__L_c":-1.0,
"phpyr_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05290",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"PHETA1"
]
},
"annotation":{
"bigg.reaction":[
"PHETA1"
],
"biocyc":[
"META:PHEAMINOTRANS-RXN",
"META:RXN-10814"
],
"ec-code":[
"2.6.1.57",
"2.6.1.5",
"2.6.1.9",
"2.6.1.1"
],
"kegg.reaction":[
"R00694"
],
"metanetx.reaction":[
"MNXR126234"
],
"rhea":[
"25153",
"25155",
"25152",
"25154"
],
"sabiork":[
"1074"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00493"
]
}
},
{
"id":"PFK",
"name":"Phosphofructokinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"f6p_c":-1.0,
"fdp_c":1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03035",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"PFK"
]
},
"annotation":{
"bigg.reaction":[
"PFK"
],
"ec-code":[
"2.7.1.11"
],
"metanetx.reaction":[
"MNXR102507"
],
"rhea":[
"16111",
"16109",
"16110",
"16112"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DMPPS_syn",
"name":"1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase (dmpp)",
"metabolites":{
"dmpp_c":1.0,
"h2mb4p_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00360",
"subsystem":"Terpenoid Biosynthesis",
"notes":{
"original_bigg_ids":[
"DMPPS_syn"
]
},
"annotation":{
"bigg.reaction":[
"DMPPS_syn"
],
"ec-code":[
"1.17.1.2"
],
"metanetx.reaction":[
"MNXR97525"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04996"
]
}
},
{
"id":"ANS2",
"name":"Anthranilate synthase 2",
"metabolites":{
"anth_c":1.0,
"chor_c":-1.0,
"h2o_c":1.0,
"h_c":1.0,
"nh4_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02040 and SYNPCC7942_RS05145",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"ANS2"
]
},
"annotation":{
"bigg.reaction":[
"ANS2"
],
"ec-code":[
"4.1.3.27"
],
"kegg.reaction":[
"R00985"
],
"metanetx.reaction":[
"MNXR95844"
],
"sabiork":[
"1279"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11283",
"rxn00726"
]
}
},
{
"id":"3OAS160",
"name":"3-oxoacyl-[acyl-carrier-protein] synthase (n-C16:0)",
"metabolites":{
"3opalmACP_c":1.0,
"ACP_c":1.0,
"co2_c":1.0,
"h_c":-1.0,
"malACP_c":-1.0,
"myrsACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAS160"
]
},
"annotation":{
"bigg.reaction":[
"3OAS160"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR94959"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACHBSb",
"name":"2-aceto-2-hydroxybutanoate synthase (step 2)",
"metabolites":{
"2ahbut_c":1.0,
"2ahethmpp_c":-1.0,
"2obut_c":-1.0,
"thmpp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00705 and SYNPCC7942_RS12365",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"ACHBSb"
]
},
"annotation":{
"bigg.reaction":[
"ACHBSb"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PC20M",
"name":"Precorrin-2 C20-methyltransferase",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"dscl_c":-1.0,
"h_c":1.0,
"pre3a_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09400",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"PC20M"
]
},
"annotation":{
"bigg.reaction":[
"PC20M"
],
"biocyc":[
"META:2.1.1.130-RXN"
],
"ec-code":[
"2.1.1.130"
],
"kegg.reaction":[
"R03948"
],
"metanetx.reaction":[
"MNXR102394"
],
"rhea":[
"16844",
"16841",
"16842",
"16843"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02775"
]
}
},
{
"id":"ADSS",
"name":"Adenylosuccinate synthase",
"metabolites":{
"asp__L_c":-1.0,
"dcamp_c":1.0,
"gdp_c":1.0,
"gtp_c":-1.0,
"h_c":2.0,
"imp_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12245",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"ADSS"
]
},
"annotation":{
"bigg.reaction":[
"ADSS"
],
"biocyc":[
"META:ADENYLOSUCCINATE-SYNTHASE-RXN"
],
"ec-code":[
"6.3.4.4"
],
"kegg.reaction":[
"R01135"
],
"metanetx.reaction":[
"MNXR95495"
],
"reactome.reaction":[
"R-GGA-421201",
"R-HSA-111524",
"R-SSC-111524",
"R-SCE-111524",
"R-MMU-111524",
"R-MMU-111519",
"R-DDI-111524",
"R-RNO-111524",
"R-SPO-111524",
"R-CFA-111524",
"R-OSA-111524",
"R-CEL-111524",
"R-DRE-111524",
"R-DME-111524",
"R-ATH-111524",
"R-GGA-111524",
"R-BTA-111524",
"R-TGU-111524",
"R-XTR-111524",
"R-PFA-111524"
],
"rhea":[
"15755",
"15756",
"15753",
"15754"
],
"sabiork":[
"228"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00838"
]
}
},
{
"id":"THRPDC",
"name":"L threonine phosphate decarboxylase",
"metabolites":{
"applp_c":1.0,
"co2_c":1.0,
"h_c":-1.0,
"thrp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05685",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"THRPD"
]
},
"annotation":{
"bigg.reaction":[
"THRPDC"
],
"biocyc":[
"META:4.1.1.81-RXN"
],
"ec-code":[
"4.1.1.81"
],
"kegg.reaction":[
"R06530"
],
"metanetx.reaction":[
"MNXR104843"
],
"rhea":[
"11495",
"11492",
"11494",
"11493"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn04385"
]
}
},
{
"id":"MPOMOR_1",
"name":"Magnesium-protoporphyrin-IX 13-monomethyl ester NADPH oxygen oxidoreductase (hydroxylating)",
"metabolites":{
"dvpchlda_c":1.0,
"h2o_c":2.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0,
"omppp9_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09670",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"MPOMOR"
]
},
"annotation":{
"bigg.reaction":[
"MPOMOR_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_cynt_e",
"name":"Cyanate exchange",
"metabolites":{
"cynt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_cynt_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_cynt_e"
],
"biocyc":[
"META:TRANS-RXN-14"
],
"metanetx.reaction":[
"MNXR96963"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn08279"
]
}
},
{
"id":"IPPMIa",
"name":"3-isopropylmalate dehydratase",
"metabolites":{
"2ippm_c":1.0,
"3c2hmp_c":-1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS09625 and SYNPCC7942_RS12945",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"IMDHT_3c2hmp"
]
},
"annotation":{
"bigg.reaction":[
"IPPMIa"
],
"biocyc":[
"META:RXN-8991"
],
"ec-code":[
"4.2.1.33"
],
"kegg.reaction":[
"R04001"
],
"metanetx.reaction":[
"MNXR100827"
],
"rhea":[
"10679",
"10677",
"10678",
"10676"
],
"sabiork":[
"3736"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02811"
]
}
},
{
"id":"SPMS",
"name":"Spermidine synthase",
"metabolites":{
"5mta_c":1.0,
"ametam_c":-1.0,
"h_c":1.0,
"ptrc_c":-1.0,
"spmd_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03225",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"SPMS"
]
},
"annotation":{
"bigg.reaction":[
"SPMS"
],
"biocyc":[
"META:SPERMIDINESYN-RXN"
],
"ec-code":[
"2.5.1.16"
],
"kegg.reaction":[
"R01920"
],
"metanetx.reaction":[
"MNXR95860"
],
"rhea":[
"12724",
"12721",
"12722",
"12723"
],
"sabiork":[
"1974"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01406"
]
}
},
{
"id":"EX_h_e",
"name":"H+ exchange",
"metabolites":{
"h_e":-1.0
},
"lower_bound":-100.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_h_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_h_e"
],
"biocyc":[
"META:RXN-14452"
],
"metanetx.reaction":[
"MNXR100765"
],
"reactome.reaction":[
"R-HSA-2534378",
"R-DDI-74723",
"R-BTA-170026",
"R-CFA-170026",
"R-SCE-74723",
"R-DRE-74723",
"R-HSA-170026",
"R-TGU-2534378",
"R-HSA-74723",
"R-CFA-2534378",
"R-TGU-74723",
"R-OSA-170026",
"R-RNO-2534378",
"R-GGA-2534378",
"R-MMU-2534378",
"R-BTA-2534378",
"R-SSC-2534378",
"R-DRE-170026",
"R-TGU-170026",
"R-GGA-170026",
"R-SCE-170026",
"R-DRE-2534378",
"R-BTA-74723",
"R-SPO-74723",
"R-XTR-74723",
"R-RNO-74723",
"R-XTR-2534378",
"R-MMU-74723",
"R-CFA-74723",
"R-GGA-74723",
"R-CEL-170026",
"R-MMU-170026",
"R-ATH-74723",
"R-DME-74723",
"R-PFA-74723",
"R-SSC-74723",
"R-XTR-170026",
"R-SSC-170026",
"R-CEL-74723",
"R-ATH-170026",
"R-RNO-170026",
"R-DME-170026"
],
"rhea":[
"34980",
"34981",
"34982",
"34979"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn11009",
"rxn08730"
]
}
},
{
"id":"BPNT",
"name":"3',5'-bisphosphate nucleotidase",
"metabolites":{
"amp_c":1.0,
"h2o_c":-1.0,
"pap_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00880 or SYNPCC7942_RS04960",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"BPNT"
]
},
"annotation":{
"bigg.reaction":[
"BPNT"
],
"biocyc":[
"META:325-BISPHOSPHATE-NUCLEOTIDASE-RXN"
],
"ec-code":[
"3.1.3.7",
"3.1.3.97"
],
"kegg.reaction":[
"R00188"
],
"metanetx.reaction":[
"MNXR96321"
],
"reactome.reaction":[
"R-DRE-176606",
"R-HSA-176606",
"R-RNO-176606",
"R-XTR-176606",
"R-SSC-176606",
"R-TGU-176606",
"R-CEL-176606",
"R-CFA-176606",
"R-DDI-176606",
"R-BTA-176606",
"R-DME-176606",
"R-GGA-176606",
"R-MMU-176606"
],
"rhea":[
"10041",
"10040",
"10043",
"10042"
],
"sabiork":[
"736"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00137",
"rxn11357"
]
}
},
{
"id":"ICDHyr",
"name":"Isocitrate dehydrogenase (NADP)",
"metabolites":{
"akg_c":1.0,
"co2_c":1.0,
"icit_c":-1.0,
"nadp_c":-1.0,
"nadph_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08745",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"ICDHyr"
]
},
"annotation":{
"bigg.reaction":[
"ICDHyr"
],
"ec-code":[
"1.1.1.42"
],
"kegg.reaction":[
"R00267"
],
"metanetx.reaction":[
"MNXR100781"
],
"rhea":[
"19629",
"19630",
"19631",
"19632"
],
"sabiork":[
"269"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00198"
]
}
},
{
"id":"TMDS3",
"name":"Thymidylate synthase (FAD dependent)",
"metabolites":{
"dtmp_c":1.0,
"dump_c":-1.0,
"h_c":-1.0,
"mlthf_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05355",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"TMDS3"
]
},
"annotation":{
"bigg.reaction":[
"TMDS3"
],
"ec-code":[
"2.1.1.148"
],
"kegg.reaction":[
"R06613"
],
"metanetx.reaction":[
"MNXR104890"
],
"rhea":[
"29045",
"29046",
"29043",
"29044"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLYOX_1",
"name":"Glyoxalase I; Ni-dependent",
"metabolites":{
"gthrd_c":1.0,
"lgt__S_c":-1.0,
"mthgxl_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03275",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"GLYOX_1"
]
},
"annotation":{
"bigg.reaction":[
"GLYOX_1"
],
"biocyc":[
"META:GLYOXI-RXN"
],
"ec-code":[
"4.4.1.5"
],
"kegg.reaction":[
"R02530"
],
"metanetx.reaction":[
"MNXR100355"
],
"reactome.reaction":[
"R-SPO-5694071",
"R-SCE-5694071",
"R-XTR-5694071",
"R-DRE-5694071",
"R-GGA-5694071",
"R-ATH-5694071",
"R-OSA-5694071",
"R-DME-5694071",
"R-MMU-5694071",
"R-TGU-5694071",
"R-CFA-5694071",
"R-HSA-5694071",
"R-RNO-5694071",
"R-SSC-5694071",
"R-BTA-5694071",
"R-DDI-5694071",
"R-PFA-5694071"
],
"rhea":[
"19071",
"19072",
"19069",
"19070"
],
"sabiork":[
"177"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01834"
]
}
},
{
"id":"MTRI",
"name":"5-methylthioribose-1-phosphate isomerase",
"metabolites":{
"5mdr1p_c":-1.0,
"5mdru1p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10100",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"MTRI"
]
},
"annotation":{
"bigg.reaction":[
"MTRI"
],
"biocyc":[
"META:5.3.1.23-RXN"
],
"ec-code":[
"5.3.1.23"
],
"kegg.reaction":[
"R04420"
],
"metanetx.reaction":[
"MNXR101759"
],
"reactome.reaction":[
"R-BTA-1299507",
"R-RNO-1237096",
"R-GGA-1299507",
"R-DME-1299507",
"R-CEL-1237096",
"R-MMU-1237096",
"R-SSC-1299507",
"R-CFA-1237096",
"R-DDI-1299507",
"R-CFA-1299507",
"R-DRE-1237096",
"R-SPO-1237096",
"R-RNO-1299507",
"R-SPO-1299507",
"R-XTR-1237096",
"R-ATH-1299507",
"R-OSA-1237096",
"R-DME-1237096",
"R-SCE-1237096",
"R-HSA-1237096",
"R-DRE-1299507",
"R-GGA-1237096",
"R-SCE-1299507",
"R-CEL-1299507",
"R-DDI-1237096",
"R-OSA-1299507",
"R-MMU-1299507",
"R-HSA-1299507",
"R-SSC-1237096",
"R-XTR-1299507",
"R-BTA-1237096",
"R-ATH-1237096"
],
"rhea":[
"19991",
"19992",
"19990",
"19989"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03057"
]
}
},
{
"id":"CTPS2",
"name":"CTP synthase (glutamine)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"ctp_c":1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"h_c":2.0,
"pi_c":1.0,
"utp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09920",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"CTPS2"
]
},
"annotation":{
"bigg.reaction":[
"CTPS2"
],
"biocyc":[
"META:CTPSYN-RXN"
],
"ec-code":[
"6.3.4.2"
],
"kegg.reaction":[
"R00573"
],
"metanetx.reaction":[
"MNXR96945"
],
"reactome.reaction":[
"R-RNO-504054",
"R-TGU-73647",
"R-RNO-73647",
"R-PFA-73647",
"R-BTA-504054",
"R-MMU-504054",
"R-SSC-73647",
"R-BTA-73647",
"R-SCE-504054",
"R-XTR-504054",
"R-OSA-73647",
"R-SPO-504054",
"R-TGU-504054",
"R-PFA-504054",
"R-DRE-73647",
"R-DME-504054",
"R-MMU-73647",
"R-OSA-504054",
"R-CFA-73647",
"R-HSA-73647",
"R-DDI-73647",
"R-DME-73647",
"R-SCE-73647",
"R-HSA-504054",
"R-GGA-73647",
"R-CFA-504054",
"R-ATH-504054",
"R-ATH-73647",
"R-DDI-504054",
"R-XTR-73647",
"R-GGA-504054",
"R-SPO-73647",
"R-SSC-504054"
],
"rhea":[
"26427",
"26429",
"26426",
"26428"
],
"sabiork":[
"459"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00412",
"rxn11276"
]
}
},
{
"id":"FE3tex",
"name":"Iron (III) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"fe3_e":-1.0,
"fe3_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"FE3tex"
]
},
"annotation":{
"bigg.reaction":[
"FE3tex"
],
"metanetx.reaction":[
"MNXR99522"
],
"reactome.reaction":[
"R-RNO-442368",
"R-HSA-442368",
"R-BTA-442368",
"R-SSC-442368",
"R-MMU-442368",
"R-CFA-442368",
"R-GGA-442368",
"R-TGU-442368"
],
"rhea":[
"34973",
"34972",
"34974",
"34971"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05292",
"rxn08492"
]
}
},
{
"id":"GTHS",
"name":"Glutathione synthetase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"glucys_c":-1.0,
"gly_c":-1.0,
"gthrd_c":1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11815",
"subsystem":"Metabolism of other amino acids: Glutathione metabolism",
"notes":{
"original_bigg_ids":[
"GTHS"
]
},
"annotation":{
"bigg.reaction":[
"GTHS"
],
"biocyc":[
"META:GLUTATHIONE-SYN-RXN"
],
"ec-code":[
"6.3.2.3"
],
"kegg.reaction":[
"R00497"
],
"metanetx.reaction":[
"MNXR100450"
],
"reactome.reaction":[
"R-RNO-174394",
"R-DDI-174394",
"R-SSC-174394",
"R-SCE-174394",
"R-TGU-174394",
"R-PFA-174394",
"R-CFA-174394",
"R-DRE-174394",
"R-DME-174394",
"R-ATH-174394",
"R-GGA-174394",
"R-HSA-174394",
"R-CEL-174394",
"R-MMU-174394",
"R-OSA-174394",
"R-XTR-174394",
"R-SPO-174394",
"R-BTA-174394"
],
"rhea":[
"13558",
"13557",
"13560",
"13559"
],
"sabiork":[
"927"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00351"
]
}
},
{
"id":"AHSERL2_1",
"name":"O-aceytlhomoserine thiol lyase",
"metabolites":{
"ac_c":1.0,
"achms_c":-1.0,
"h2s_c":-1.0,
"hcys__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01885",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"AHSERL2"
]
},
"annotation":{
"bigg.reaction":[
"AHSERL2_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PEPC",
"name":"Phosphoenolpyruvate carboxylase",
"metabolites":{
"hco3_c":-1.0,
"oaa_c":1.0,
"pep_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11450",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"PEPC"
]
},
"annotation":{
"bigg.reaction":[
"PEPC"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CHORM",
"name":"Chorismate mutase",
"metabolites":{
"chor_c":-1.0,
"pphn_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09720",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"CHORM"
]
},
"annotation":{
"bigg.reaction":[
"CHORM"
],
"biocyc":[
"META:CHORISMATEMUT-RXN"
],
"ec-code":[
"5.4.99.5"
],
"kegg.reaction":[
"R01715"
],
"metanetx.reaction":[
"MNXR96708"
],
"rhea":[
"13897",
"13899",
"13898",
"13900"
],
"sabiork":[
"1827"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01256"
]
}
},
{
"id":"NTRARf2",
"name":"Nitrite reductase (ferredoxin)",
"metabolites":{
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h2o_c":1.0,
"h_c":-2.0,
"no2_c":1.0,
"no3_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06330",
"subsystem":"Nitrogen metabolism",
"notes":{
"original_bigg_ids":[
"NTRARf2"
]
},
"annotation":{
"bigg.reaction":[
"NTRARf2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"FE2tex",
"name":"Iron (II) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"fe2_e":-1.0,
"fe2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"FE2tex"
]
},
"annotation":{
"bigg.reaction":[
"FE2tex"
],
"biocyc":[
"META:TRANS-RXN-8"
],
"metanetx.reaction":[
"MNXR99505"
],
"rhea":[
"28488",
"28487",
"28489",
"28486"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08476",
"rxn08475",
"rxn13286",
"rxn10963"
]
}
},
{
"id":"G6PDA",
"name":"Glucosamine-6-phosphate deaminase",
"metabolites":{
"f6p_c":1.0,
"gam6p_c":-1.0,
"h2o_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05655",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"G6PDA"
]
},
"annotation":{
"bigg.reaction":[
"G6PDA"
],
"ec-code":[
"3.5.99.6"
],
"kegg.reaction":[
"R00765"
],
"metanetx.reaction":[
"MNXR99905"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00552"
]
}
},
{
"id":"MPML",
"name":"Mg-protoporphyrin IX magnesium-lyase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":3.0,
"mg2_c":-1.0,
"mppp9_c":1.0,
"pi_c":1.0,
"ppp9_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02965 and SYNPCC7942_RS10840 and SYNPCC7942_RS11555",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"MPML"
]
},
"annotation":{
"bigg.reaction":[
"MPML"
],
"biocyc":[
"META:RXN1F-20"
],
"ec-code":[
"6.6.1.1"
],
"kegg.reaction":[
"R03877"
],
"metanetx.reaction":[
"MNXR101721"
],
"rhea":[
"13964",
"13961",
"13962",
"13963"
],
"sabiork":[
"3625"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02733"
]
}
},
{
"id":"Nat_Kpp",
"name":"Sodium:potassium antiporter (periplasm to cytosol)",
"metabolites":{
"k_c":1.0,
"k_p":-1.0,
"na1_c":-1.0,
"na1_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05550 and SYNPCC7942_RS05545",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"Nat_Kpp"
]
},
"annotation":{
"bigg.reaction":[
"Nat_Kpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PDH",
"name":"Pyruvate dehydrogenase",
"metabolites":{
"accoa_c":1.0,
"co2_c":1.0,
"coa_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05480 and SYNPCC7942_RS06135 and SYNPCC7942_RS00725 and SYNPCC7942_RS09865",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"PDH"
]
},
"annotation":{
"bigg.reaction":[
"PDH"
],
"biocyc":[
"META:PYRUVDEH-RXN"
],
"ec-code":[
"1.2.1",
"1.8.1.4",
"1.2.1.51",
"1.2.4.1",
"2.3.1.12"
],
"kegg.reaction":[
"R00209"
],
"metanetx.reaction":[
"MNXR102425"
],
"reactome.reaction":[
"R-RNO-71397",
"R-OSA-71397",
"R-GGA-373177",
"R-DME-71397",
"R-TGU-71397",
"R-XTR-71397",
"R-CFA-71397",
"R-BTA-71397",
"R-HSA-71397",
"R-GGA-71397",
"R-SPO-71397",
"R-CEL-71397",
"R-DDI-71397",
"R-DRE-71397",
"R-SSC-71397",
"R-SCE-71397",
"R-ATH-71397",
"R-MMU-71397"
],
"rhea":[
"28043",
"28045",
"28044",
"28042"
],
"sabiork":[
"523"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00154"
]
}
},
{
"id":"TPI",
"name":"Triose-phosphate isomerase",
"metabolites":{
"dhap_c":-1.0,
"g3p_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06460",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"TPI"
]
},
"annotation":{
"bigg.reaction":[
"TPI"
],
"biocyc":[
"META:TRIOSEPISOMERIZATION-RXN"
],
"ec-code":[
"5.3.1.1"
],
"kegg.reaction":[
"R01015"
],
"metanetx.reaction":[
"MNXR104918"
],
"reactome.reaction":[
"R-RNO-70481",
"R-MMU-70481",
"R-XTR-70481",
"R-SSC-70481",
"R-GGA-352927",
"R-SCE-70454",
"R-CEL-70481",
"R-PFA-70454",
"R-XTR-70454",
"R-BTA-70481",
"R-BTA-70454",
"R-GGA-352914",
"R-ATH-70481",
"R-CFA-70454",
"R-OSA-70454",
"R-HSA-70481",
"R-DRE-70454",
"R-DME-70481",
"R-OSA-70481",
"R-DRE-70481",
"R-ATH-70454",
"R-HSA-70454",
"R-SSC-70454",
"R-DDI-70454",
"R-SCE-70481",
"R-CFA-70481",
"R-PFA-70481",
"R-DDI-70481",
"R-SPO-70454",
"R-SPO-70481",
"R-RNO-70454",
"R-MMU-70454",
"R-CEL-70454",
"R-GGA-70481",
"R-GGA-70454",
"R-DME-70454"
],
"rhea":[
"18587",
"18588",
"18586",
"18585"
],
"sabiork":[
"4"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00747"
]
}
},
{
"id":"E4PD",
"name":"Erythrose 4-phosphate dehydrogenase",
"metabolites":{
"4per_c":1.0,
"e4p_c":-1.0,
"h2o_c":-1.0,
"h_c":2.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01250 or SYNPCC7942_RS09840",
"subsystem":"Cofactor biosynthesis: Vitamin B6",
"notes":{
"original_bigg_ids":[
"E4PD"
]
},
"annotation":{
"bigg.reaction":[
"E4PD"
],
"biocyc":[
"META:ERYTH4PDEHYDROG-RXN"
],
"ec-code":[
"1.2.1.72"
],
"kegg.reaction":[
"R01825"
],
"metanetx.reaction":[
"MNXR97842"
],
"rhea":[
"12058",
"12057",
"12059",
"12056"
],
"sabiork":[
"1909"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01331"
]
}
},
{
"id":"GAPD",
"name":"Glyceraldehyde-3-phosphate dehydrogenase",
"metabolites":{
"13dpg_c":1.0,
"g3p_c":-1.0,
"h_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pi_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01250 or SYNPCC7942_RS09840",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"GAPD"
]
},
"annotation":{
"bigg.reaction":[
"GAPD"
],
"biocyc":[
"META:GAPOXNPHOSPHN-RXN"
],
"ec-code":[
"1.2.1.12",
"1.2.1.59"
],
"kegg.reaction":[
"R01061"
],
"metanetx.reaction":[
"MNXR100040"
],
"reactome.reaction":[
"R-ATH-70482",
"R-DME-70449",
"R-PFA-70482",
"R-SPO-70449",
"R-DRE-70449",
"R-CEL-70449",
"R-CEL-70482",
"R-CFA-70449",
"R-MMU-70482",
"R-HSA-70449",
"R-OSA-70482",
"R-GGA-352956",
"R-RNO-70449",
"R-SCE-70449",
"R-SSC-70482",
"R-ATH-70449",
"R-GGA-70482",
"R-OSA-70449",
"R-GGA-352921",
"R-DDI-70449",
"R-SPO-70482",
"R-TGU-70482",
"R-SCE-70482",
"R-HSA-70482",
"R-DME-70482",
"R-PFA-70449",
"R-XTR-70449",
"R-DRE-70482",
"R-XTR-70482",
"R-GGA-70449",
"R-RNO-70482",
"R-SSC-70449",
"R-DDI-70482",
"R-TGU-70449",
"R-MMU-70449",
"R-CFA-70482",
"R-BTA-70449",
"R-BTA-70482"
],
"rhea":[
"10303",
"10300",
"10302",
"10301"
],
"sabiork":[
"7844"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00781"
]
}
},
{
"id":"CPPPGO",
"name":"Coproporphyrinogen oxidase (O2 required)",
"metabolites":{
"co2_c":2.0,
"cpppg3_c":-1.0,
"h2o_c":2.0,
"h_c":-2.0,
"o2_c":-1.0,
"pppg9_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03450",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"CPPPGO"
]
},
"annotation":{
"bigg.reaction":[
"CPPPGO"
],
"biocyc":[
"META:RXN0-1461"
],
"ec-code":[
"1.3.3.3"
],
"kegg.reaction":[
"R03220"
],
"metanetx.reaction":[
"MNXR96880"
],
"rhea":[
"18257",
"18258",
"18259",
"18260"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02303"
]
}
},
{
"id":"PRMICI",
"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase",
"metabolites":{
"prfp_c":-1.0,
"prlp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09280",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"PRMICI"
]
},
"annotation":{
"bigg.reaction":[
"PRMICI"
],
"biocyc":[
"META:PRIBFAICARPISOM-RXN"
],
"ec-code":[
"5.3.1.16"
],
"kegg.reaction":[
"R04640"
],
"metanetx.reaction":[
"MNXR103169"
],
"rhea":[
"15471",
"15472",
"15469",
"15470"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03175"
]
}
},
{
"id":"CAT",
"name":"Catalase",
"metabolites":{
"h2o2_c":-2.0,
"h2o_c":2.0,
"o2_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08445",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"CAT"
]
},
"annotation":{
"bigg.reaction":[
"CAT"
],
"biocyc":[
"META:CATAL-RXN"
],
"ec-code":[
"1.11.1.21",
"1.11.1.6"
],
"kegg.reaction":[
"R00009"
],
"metanetx.reaction":[
"MNXR96455"
],
"reactome.reaction":[
"R-XTR-76031",
"R-DME-76031",
"R-CEL-76031",
"R-GGA-76031",
"R-RNO-76031",
"R-SCE-76031",
"R-TGU-76031",
"R-ATH-76031",
"R-HSA-76031",
"R-MMU-76031",
"R-SPO-76031",
"R-BTA-76031",
"R-OSA-76031",
"R-SSC-76031",
"R-DRE-76031",
"R-CFA-76031",
"R-HSA-1222704",
"R-DDI-76031"
],
"rhea":[
"20309",
"20310",
"20311",
"20312"
],
"sabiork":[
"373"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00006"
]
}
},
{
"id":"GLUR",
"name":"Glutamate racemase",
"metabolites":{
"glu__D_c":-1.0,
"glu__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11995",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"GLUR"
]
},
"annotation":{
"bigg.reaction":[
"GLUR"
],
"biocyc":[
"META:GLUTRACE-RXN"
],
"ec-code":[
"5.1.1.3"
],
"kegg.reaction":[
"R00260"
],
"metanetx.reaction":[
"MNXR100288"
],
"rhea":[
"12813",
"12814",
"12815",
"12816"
],
"sabiork":[
"765"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00193"
]
}
},
{
"id":"OCBT",
"name":"Ornithine carbamoyltransferase",
"metabolites":{
"cbp_c":-1.0,
"citr__L_c":1.0,
"h_c":1.0,
"orn_c":-1.0,
"pi_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12760",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"OCBT"
]
},
"annotation":{
"bigg.reaction":[
"OCBT"
],
"biocyc":[
"META:RXN-13482",
"META:ORNCARBAMTRANSFER-RXN"
],
"ec-code":[
"2.1.3.3"
],
"kegg.reaction":[
"R01398"
],
"metanetx.reaction":[
"MNXR102137"
],
"reactome.reaction":[
"R-OSA-70560",
"R-ATH-70560",
"R-CFA-70560",
"R-HSA-70560",
"R-BTA-70560",
"R-DRE-70560",
"R-RNO-70560",
"R-GGA-70560",
"R-SPO-70560",
"R-TGU-70560",
"R-XTR-70560",
"R-SSC-70560",
"R-MMU-70560",
"R-GGA-187588",
"R-SCE-70560"
],
"rhea":[
"19514",
"19516",
"19513",
"19515"
],
"sabiork":[
"98"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01019"
]
}
},
{
"id":"NI2tex",
"name":"Nickel transport via diffusion (extracellular to periplasm)",
"metabolites":{
"ni2_e":-1.0,
"ni2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"NI2tex"
]
},
"annotation":{
"bigg.reaction":[
"NI2tex"
],
"biocyc":[
"META:TRANS-RXN-141B"
],
"metanetx.reaction":[
"MNXR101958"
],
"rhea":[
"29833",
"29831",
"29834",
"29832"
],
"sbo":"SBO:0000185"
}
},
{
"id":"GLGC",
"name":"Glucose-1-phosphate adenylyltransferase",
"metabolites":{
"adpglc_c":1.0,
"atp_c":-1.0,
"g1p_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03095",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"GLGC"
]
},
"annotation":{
"bigg.reaction":[
"GLGC"
],
"biocyc":[
"META:GLUC1PADENYLTRANS-RXN"
],
"ec-code":[
"2.7.7.27"
],
"kegg.reaction":[
"R00948"
],
"metanetx.reaction":[
"MNXR100243"
],
"rhea":[
"12122",
"12121",
"12120",
"12123"
],
"sabiork":[
"9396",
"1262"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00695"
]
}
},
{
"id":"PYK",
"name":"Pyruvate kinase",
"metabolites":{
"adp_c":-1.0,
"atp_c":1.0,
"h_c":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00500",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"PYK"
]
},
"annotation":{
"bigg.reaction":[
"PYK"
],
"biocyc":[
"META:PEPDEPHOS-RXN"
],
"ec-code":[
"2.7.1.40"
],
"kegg.reaction":[
"R00200"
],
"metanetx.reaction":[
"MNXR103371"
],
"reactome.reaction":[
"R-SSC-71670",
"R-GGA-353056",
"R-DRE-71670",
"R-OSA-71670",
"R-SPO-71670",
"R-DDI-71670",
"R-SCE-71670",
"R-CEL-71670",
"R-PFA-71670",
"R-HSA-71670",
"R-TGU-71670",
"R-DME-71670",
"R-ATH-71670",
"R-BTA-71670",
"R-MMU-71670",
"R-RNO-71670",
"R-GGA-71670",
"R-CFA-71670",
"R-XTR-71670"
],
"rhea":[
"18160",
"18159",
"18158",
"18157"
],
"sabiork":[
"9"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00148"
]
}
},
{
"id":"CA2t2pp",
"name":"Calcium (Ca+2) transport out via proton antiport (periplasm)",
"metabolites":{
"ca2_c":-1.0,
"ca2_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00120",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"CA2t2pp"
]
},
"annotation":{
"bigg.reaction":[
"CA2t2pp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"ALAR",
"name":"Alanine racemase",
"metabolites":{
"ala__D_c":1.0,
"ala__L_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11185",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"ALAR"
]
},
"annotation":{
"bigg.reaction":[
"ALAR"
],
"biocyc":[
"META:ALARACECAT-RXN"
],
"ec-code":[
"5.1.1.1"
],
"kegg.reaction":[
"R00401"
],
"metanetx.reaction":[
"MNXR95693"
],
"rhea":[
"20252",
"20251",
"20249",
"20250"
],
"sabiork":[
"862"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00283"
]
}
},
{
"id":"SULR_2",
"name":"Ferredoxin-sulfite reductase",
"metabolites":{
"fdxox_c":6.0,
"fdxrd_c":-6.0,
"h2o_c":3.0,
"h2s_c":1.0,
"h_c":-7.0,
"so3_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00100",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"SULR"
]
},
"annotation":{
"bigg.reaction":[
"SULR_2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ADCS",
"name":"4-amino-4-deoxychorismate synthase",
"metabolites":{
"4adcho_c":1.0,
"chor_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06820",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"ADCS"
]
},
"annotation":{
"bigg.reaction":[
"ADCS"
],
"biocyc":[
"META:PABASYN-RXN"
],
"ec-code":[
"2.6.1.85"
],
"kegg.reaction":[
"R01716"
],
"metanetx.reaction":[
"MNXR95440"
],
"rhea":[
"11672",
"11675",
"11673",
"11674"
],
"sabiork":[
"1828"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01257"
]
}
},
{
"id":"UGMDDS",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine synthetase",
"metabolites":{
"adp_c":1.0,
"alaala_c":-1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"ugmd_c":-1.0,
"ugmda_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09340",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UGMDDS"
]
},
"annotation":{
"bigg.reaction":[
"UGMDDS"
],
"ec-code":[
"6.3.2.10"
],
"metanetx.reaction":[
"MNXR105094"
],
"sabiork":[
"4284"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLCDBRAN3",
"name":"Glycogen debranching enzyme",
"metabolites":{
"14glucan_c":1.0,
"glc__D_c":1.0,
"glycogen_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00425 and SYNPCC7942_RS05240",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"GLCDBRAN3"
]
},
"annotation":{
"bigg.reaction":[
"GLCDBRAN3"
],
"sbo":"SBO:0000176"
}
},
{
"id":"IG3PS",
"name":"Imidazole-glycerol-3-phosphate synthase",
"metabolites":{
"aicar_c":1.0,
"eig3p_c":1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h_c":1.0,
"prlp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10580 and SYNPCC7942_RS07570",
"subsystem":"Histidine Metabolism",
"notes":{
"original_bigg_ids":[
"IG3PS"
]
},
"annotation":{
"bigg.reaction":[
"IG3PS"
],
"biocyc":[
"META:GLUTAMIDOTRANS-RXN"
],
"ec-code":[
"4.1.3.-",
"4.3.2.M2",
"2.4.2.-"
],
"kegg.reaction":[
"R04558"
],
"metanetx.reaction":[
"MNXR100811"
],
"rhea":[
"24796",
"24794",
"24793",
"24795"
],
"sabiork":[
"4234"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03135"
]
}
},
{
"id":"RPI",
"name":"Ribose-5-phosphate isomerase",
"metabolites":{
"r5p_c":-1.0,
"ru5p__D_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02970",
"subsystem":"Calvin cycle/Pentose phosphate pathway",
"notes":{
"original_bigg_ids":[
"RPI"
]
},
"annotation":{
"bigg.reaction":[
"RPI"
],
"ec-code":[
"5.3.1.6"
],
"metanetx.reaction":[
"MNXR104084"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NAt3pp",
"name":"Sodium transport out via proton antiport (cytoplasm to periplasm)",
"metabolites":{
"h_c":1.0,
"h_p":-1.0,
"na1_c":-1.0,
"na1_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11985 or SYNPCC7942_RS04195 or SYNPCC7942_RS06475 or SYNPCC7942_RS02780 or SYNPCC7942_RS01565 or SYNPCC7942_RS12165 or SYNPCC7942_RS11110",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"NAt3ipp"
]
},
"annotation":{
"bigg.reaction":[
"NAt3pp"
],
"biocyc":[
"META:TRANS-RXN-101"
],
"metanetx.reaction":[
"MNXR101803"
],
"reactome.reaction":[
"R-DME-425983",
"R-MMU-425983",
"R-HSA-2872463",
"R-OSA-425965",
"R-SCE-426015",
"R-BTA-2872444",
"R-DME-425994",
"R-DME-426015",
"R-SPO-425983",
"R-CFA-425994",
"R-HSA-2872444",
"R-MMU-425994",
"R-HSA-426015",
"R-SSC-425983",
"R-RNO-426015",
"R-DME-2872444",
"R-ATH-426015",
"R-XTR-425983",
"R-HSA-425983",
"R-SSC-425965",
"R-DME-425965",
"R-RNO-425983",
"R-TGU-425994",
"R-MMU-425965",
"R-MMU-426015",
"R-CFA-425965",
"R-BTA-425983",
"R-SSC-425994",
"R-GGA-425994",
"R-RNO-2872444",
"R-XTR-2872444",
"R-CFA-425983",
"R-CEL-425965",
"R-TGU-425983",
"R-OSA-425983",
"R-XTR-426015",
"R-OSA-426015",
"R-ATH-425983",
"R-DRE-426015",
"R-XTR-425965",
"R-HSA-425994",
"R-SCE-425983",
"R-GGA-426015",
"R-SPO-425965",
"R-XTR-425994",
"R-GGA-425983",
"R-MMU-2872452",
"R-RNO-425965",
"R-HSA-425965",
"R-DDI-426015",
"R-TGU-425965",
"R-BTA-426015",
"R-CEL-425994",
"R-BTA-425994",
"R-BTA-425965",
"R-CEL-425983",
"R-CEL-426015",
"R-CFA-2872444",
"R-DRE-425994",
"R-MMU-2872444",
"R-RNO-425994",
"R-SCE-425965",
"R-SCE-425994",
"R-SPO-426015",
"R-SSC-426015",
"R-ATH-425965",
"R-TGU-2872444",
"R-GGA-2872444",
"R-DRE-425983",
"R-GGA-425965",
"R-SSC-2872444",
"R-TGU-426015",
"R-DRE-2872444",
"R-CFA-426015",
"R-CEL-2872444"
],
"rhea":[
"29422",
"29420",
"29421",
"29419"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08984",
"rxn05209"
]
}
},
{
"id":"MNtex",
"name":"Manganese (Mn+2) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"mn2_e":-1.0,
"mn2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"MNtex"
]
},
"annotation":{
"bigg.reaction":[
"MNtex"
],
"biocyc":[
"META:RXN0-16",
"META:TRANS-RXN0-487"
],
"metanetx.reaction":[
"MNXR101670"
],
"rhea":[
"28702",
"28699",
"28700",
"28701"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08952",
"rxn08947"
]
}
},
{
"id":"GLYCLTDx",
"name":"Glycolate dehydrogenase (NAD)",
"metabolites":{
"glx_c":-1.0,
"glyclt_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":0.0,
"gene_reaction_rule":"(SYNPCC7942_RS01405 and SYNPCC7942_RS08735 and SYNPCC7942_RS08740) or SYNPCC7942_RS02885",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"GLYCLTDx"
]
},
"annotation":{
"bigg.reaction":[
"GLYCLTDx"
],
"biocyc":[
"META:GLYCOLATE-REDUCTASE-RXN"
],
"ec-code":[
"1.1.1.79",
"1.1.1.26",
"1.1.1.29"
],
"kegg.reaction":[
"R00717"
],
"metanetx.reaction":[
"MNXR100331"
],
"rhea":[
"18231",
"18230",
"18232",
"18229"
],
"sabiork":[
"425"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00512"
]
}
},
{
"id":"FMNRy_1",
"name":"FMN reductase NADPH dependent",
"metabolites":{
"fmn_c":-1.0,
"fmnh2_c":1.0,
"h_c":-2.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02765",
"subsystem":"Cofactor biosynthesis: Riboflavin biosynthesis",
"notes":{
"original_bigg_ids":[
"FMNRy"
]
},
"annotation":{
"bigg.reaction":[
"FMNRy_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GHMT2r",
"name":"Glycine hydroxymethyltransferase, reversible",
"metabolites":{
"gly_c":1.0,
"h2o_c":1.0,
"mlthf_c":1.0,
"ser__L_c":-1.0,
"thf_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01435",
"subsystem":"Amino acid metabolism: Glycine, Serine and Threonine metabolism",
"notes":{
"original_bigg_ids":[
"GHMT2r"
]
},
"annotation":{
"bigg.reaction":[
"GHMT2r"
],
"ec-code":[
"2.1.2.1"
],
"kegg.reaction":[
"R00945"
],
"metanetx.reaction":[
"MNXR100142"
],
"rhea":[
"15481",
"15483",
"15484",
"15482"
],
"sbo":"SBO:0000176"
}
},
{
"id":"COBALT2tex",
"name":"Cobalt (Co+2) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"cobalt2_e":-1.0,
"cobalt2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"COBALT2tex"
]
},
"annotation":{
"bigg.reaction":[
"COBALT2tex"
],
"biocyc":[
"META:TRANS-RXN-141A"
],
"metanetx.reaction":[
"MNXR96821"
],
"rhea":[
"28579",
"28580",
"28581",
"28578"
],
"sabiork":[
"12148"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08241",
"rxn08242",
"rxn10474"
]
}
},
{
"id":"PGPP_OLE_PALM",
"name":"Phosphatidylglycerol phosphate phosphatase (18:1(9Z)/16:0)",
"metabolites":{
"h2o_c":-1.0,
"pg1819Z160_c":1.0,
"pgp1819Z160_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"PGPP_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"PGPP_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CU2tex",
"name":"Copper (Cu+2) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"cu2_e":-1.0,
"cu2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"CU2tex"
]
},
"annotation":{
"bigg.reaction":[
"CU2tex"
],
"biocyc":[
"META:RXN0-14"
],
"metanetx.reaction":[
"MNXR96951"
],
"reactome.reaction":[
"R-HSA-437300",
"R-DME-437300",
"R-RNO-437300",
"R-SCE-437300",
"R-DRE-437300",
"R-XTR-437300",
"R-TGU-437300",
"R-BTA-437300",
"R-CFA-437300",
"R-SSC-437300",
"R-MMU-437300",
"R-GGA-437300"
],
"rhea":[
"28705",
"28706",
"28704",
"28703"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08274",
"rxn05212",
"rxn08273"
]
}
},
{
"id":"MEOHtrpp",
"name":"Methanol reversible transport via diffusion (periplasm)",
"metabolites":{
"meoh_c":1.0,
"meoh_p":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"MEOHtpp"
]
},
"annotation":{
"bigg.reaction":[
"MEOHtrpp"
],
"biocyc":[
"META:TRANS-RXN0-459"
],
"metanetx.reaction":[
"MNXR101464"
],
"rhea":[
"34873",
"34872",
"34874",
"34871"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10570"
]
}
},
{
"id":"MEOHtex",
"name":"Methanol transport via diffusion (extracellular to periplasm)",
"metabolites":{
"meoh_e":-1.0,
"meoh_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"MEOHtex"
]
},
"annotation":{
"bigg.reaction":[
"MEOHtex"
],
"biocyc":[
"META:TRANS-RXN0-459"
],
"metanetx.reaction":[
"MNXR101464"
],
"rhea":[
"34873",
"34872",
"34874",
"34871"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10570"
]
}
},
{
"id":"H2Otcx",
"name":"H2O transport into CAX (diffusion)",
"metabolites":{
"h2o_c":-1.0,
"h2o_cx":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: carboxyzome",
"notes":{
"original_bigg_ids":[
"H2Otcx"
]
},
"annotation":{
"bigg.reaction":[
"H2Otcx"
],
"sbo":"SBO:0000185"
}
},
{
"id":"Zn2tex",
"name":"Zinc (Zn+2) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"zn2_e":-1.0,
"zn2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"Zn2tex"
]
},
"annotation":{
"bigg.reaction":[
"Zn2tex"
],
"biocyc":[
"META:RXN0-12"
],
"metanetx.reaction":[
"MNXR105280"
],
"reactome.reaction":[
"R-RNO-442359",
"R-TGU-437085",
"R-TGU-437139",
"R-DRE-442393",
"R-HSA-437084",
"R-PFA-437136",
"R-CFA-442422",
"R-BTA-437139",
"R-SSC-442393",
"R-HSA-437129",
"R-XTR-435366",
"R-RNO-442422",
"R-RNO-437136",
"R-SCE-437085",
"R-DME-442422",
"R-DDI-442422",
"R-MMU-435366",
"R-RNO-442317",
"R-DDI-437136",
"R-CEL-442393",
"R-SSC-437139",
"R-CEL-442422",
"R-ATH-437085",
"R-MMU-437136",
"R-MMU-442317",
"R-DRE-442422",
"R-MMU-437139",
"R-SPO-435366",
"R-DME-437136",
"R-OSA-442393",
"R-XTR-437085",
"R-OSA-442422",
"R-CEL-435366",
"R-DRE-442317",
"R-BTA-442317",
"R-DDI-435366",
"R-SSC-442422",
"R-HSA-442387",
"R-HSA-437139",
"R-SCE-435366",
"R-MMU-437085",
"R-ATH-442422",
"R-HSA-442405",
"R-GGA-435366",
"R-CEL-442317",
"R-SSC-442317",
"R-DRE-442387",
"R-DRE-437085",
"R-MMU-437092",
"R-SCE-442422",
"R-CFA-442393",
"R-BTA-442393",
"R-SSC-437136",
"R-TGU-442422",
"R-BTA-442387",
"R-OSA-437085",
"R-RNO-442393",
"R-SCE-442393",
"R-RNO-437139",
"R-SSC-437085",
"R-XTR-442317",
"R-XTR-442393",
"R-GGA-437136",
"R-SCE-437136",
"R-XTR-437136",
"R-HSA-437085",
"R-ATH-442393",
"R-XTR-437139",
"R-BTA-437085",
"R-GGA-442317",
"R-GGA-437085",
"R-CEL-442387",
"R-SSC-435366",
"R-TGU-442387",
"R-SCE-437139",
"R-CEL-437136",
"R-MMU-442387",
"R-MMU-442422",
"R-BTA-442422",
"R-RNO-435366",
"R-RNO-442387",
"R-CFA-437085",
"R-DME-442317",
"R-HSA-435366",
"R-DRE-437139",
"R-TGU-437136",
"R-TGU-435366",
"R-SCE-442387",
"R-HSA-442422",
"R-ATH-437136",
"R-HSA-442317",
"R-HSA-442393",
"R-CEL-437139",
"R-HSA-442345",
"R-GGA-442387",
"R-CFA-442317",
"R-GGA-442422",
"R-DRE-437136",
"R-MMU-442319",
"R-MMU-442393",
"R-GGA-437139",
"R-OSA-437136",
"R-BTA-435366",
"R-CEL-437085",
"R-XTR-442387",
"R-SSC-442387",
"R-DRE-435366",
"R-DDI-437085",
"R-MMU-437145",
"R-CFA-442387",
"R-SPO-442393",
"R-TGU-442317",
"R-DME-442393",
"R-XTR-442422",
"R-SCE-442317",
"R-SPO-437085",
"R-CFA-435366",
"R-RNO-437085",
"R-CFA-437139",
"R-HSA-435375",
"R-RNO-437094",
"R-CFA-437136",
"R-HSA-437136",
"R-DME-435366"
],
"rhea":[
"29353",
"29351",
"29352",
"29354"
],
"sabiork":[
"13042"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09391",
"rxn09390"
]
}
},
{
"id":"EX_photon410_e",
"name":"Modeling: exchange reaction, photon absorption (400nm-420nm)",
"metabolites":{
"photon410_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon410_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon410_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon430_e",
"name":"Modeling: exchange reaction, photon absorption (420nm-440nm) ",
"metabolites":{
"photon430_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon430_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon430_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon450_e",
"name":"Modeling: exchange reaction, photon absorption (440nm-460nm) ",
"metabolites":{
"photon450_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon450_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon450_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon470_e",
"name":"Modeling: exchange reaction, photon absorption (460nm-480nm) ",
"metabolites":{
"photon470_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon470_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon470_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon490_e",
"name":"Modeling: exchange reaction, photon absorption (480-500nm) ",
"metabolites":{
"photon490_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon490_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon490_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon510_e",
"name":"Modeling: exchange reaction, photon absorption (500nm-520nm)",
"metabolites":{
"photon510_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon510_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon510_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"DM_amob_c",
"name":"Sink needed to allow S-Adenosyl-4-methylthio-2-oxobutanoate to leave system",
"metabolites":{
"amob_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_amob_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_amob_c"
],
"metanetx.reaction":[
"MNXR142748"
],
"sbo":"SBO:0000628"
}
},
{
"id":"ADNK1",
"name":"Adenosine kinase",
"metabolites":{
"adn_c":-1.0,
"adp_c":1.0,
"amp_c":1.0,
"atp_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"ADNK1"
]
},
"annotation":{
"bigg.reaction":[
"ADNK1"
],
"biocyc":[
"META:ADENOSINE-KINASE-RXN"
],
"ec-code":[
"2.7.1.74",
"2.7.1.20"
],
"kegg.reaction":[
"R00185"
],
"metanetx.reaction":[
"MNXR95456"
],
"rhea":[
"20827",
"20824",
"20826",
"20825"
],
"sabiork":[
"252"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00134"
]
}
},
{
"id":"OPMEACPD",
"name":"3-Oxo-pimeloyl-[ACP] methyl ester dehydratase",
"metabolites":{
"epmeACP_c":1.0,
"h2o_c":1.0,
"hpmeACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"OPMEACPD"
]
},
"annotation":{
"bigg.reaction":[
"OPMEACPD"
],
"biocyc":[
"META:RXN-11481"
],
"ec-code":[
"4.2.1.59"
],
"kegg.reaction":[
"R10121"
],
"metanetx.reaction":[
"MNXR102206"
],
"sbo":"SBO:0000176"
}
},
{
"id":"OPMEACPR",
"name":"3-Oxo-pimeloyl-[ACP] methyl ester reductase",
"metabolites":{
"h_c":-1.0,
"hpmeACP_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"opmeACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"OPMEACPR"
]
},
"annotation":{
"bigg.reaction":[
"OPMEACPR"
],
"metanetx.reaction":[
"MNXR102207"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_photon530_e",
"name":"Modeling: exchange reaction, photon absorption (520nm-540nm) ",
"metabolites":{
"photon530_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon530_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon530_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon550_e",
"name":"Modeling: exchange reaction, photon absorption (540nm-560nm) ",
"metabolites":{
"photon550_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon550_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon550_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"SPP",
"name":"Sucrose-phosphate phosphatase",
"metabolites":{
"h2o_c":-1.0,
"pi_c":1.0,
"suc6p_c":-1.0,
"sucr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04180",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"SPP"
]
},
"annotation":{
"bigg.reaction":[
"SPP"
],
"biocyc":[
"META:SUCROSE-PHOSPHATASE-RXN"
],
"ec-code":[
"3.1.3.24"
],
"kegg.reaction":[
"R06211",
"R00805"
],
"metanetx.reaction":[
"MNXR104499"
],
"rhea":[
"19289",
"19292",
"19290",
"19291"
],
"sabiork":[
"1150"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00578"
]
}
},
{
"id":"SPMDtex",
"name":"Spermidine transport via diffusion (extracellular to periplasm)",
"metabolites":{
"spmd_e":-1.0,
"spmd_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"SPMDtex"
]
},
"annotation":{
"bigg.reaction":[
"SPMDtex"
],
"metanetx.reaction":[
"MNXR104495"
],
"rhea":[
"35040",
"35039",
"35042",
"35041"
],
"sabiork":[
"13767"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn13397",
"rxn09266"
]
}
},
{
"id":"AGPAT160",
"name":"1-hexadecanoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:0)",
"metabolites":{
"1hdecg3p_c":-1.0,
"ACP_c":1.0,
"pa160_c":1.0,
"palmACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07455",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"AGPAT160"
]
},
"annotation":{
"bigg.reaction":[
"AGPAT160"
],
"ec-code":[
"2.3.1.51"
],
"metanetx.reaction":[
"MNXR95561"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_photon570_e",
"name":"Modeling: exchange reaction, photon absorption (560nm-580nm) ",
"metabolites":{
"photon570_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon570_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon570_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon590_e",
"name":"Modeling: exchange reaction, photon absorption (580-600nm) ",
"metabolites":{
"photon590_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon590_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon590_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon610_e",
"name":"Modeling: exchange reaction, photon absorption (600nm-620nm)",
"metabolites":{
"photon610_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon610_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon610_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"AGPATACP_HDE_PALM",
"name":"1-9-Hexadecenoyl-sn-glycerol-3-phosphate O-acyltransferase (16:0) (ACP Substrate)",
"metabolites":{
"1hdec9eg3p_c":-1.0,
"ACP_c":1.0,
"pa1619Z160_c":1.0,
"palmACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07455",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"AGPATACP_HDE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"AGPATACP_HDE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"LEUtex",
"name":"L-leucine transport via diffusion (extracellular to periplasm)",
"metabolites":{
"leu__L_e":-1.0,
"leu__L_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"LEUtex"
]
},
"annotation":{
"bigg.reaction":[
"LEUtex"
],
"biocyc":[
"META:RXN66-447"
],
"metanetx.reaction":[
"MNXR101057"
],
"sabiork":[
"13056"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08786",
"rxn11003"
]
}
},
{
"id":"BTS6",
"name":"Biotin synthase",
"metabolites":{
"ala__L_c":1.0,
"amet_c":-1.0,
"btn_c":1.0,
"cys__L_c":-1.0,
"dad_5_c":1.0,
"dtbt_c":-1.0,
"h_c":1.0,
"met__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02140 and SYNPCC7942_RS02300 and SYNPCC7942_RS08825 and SYNPCC7942_RS08830 and SYNPCC7942_RS08835 and SYNPCC7942_RS08840 and SYNPCC7942_RS08845",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"BTS6"
]
},
"annotation":{
"bigg.reaction":[
"BTS6"
],
"sbo":"SBO:0000176"
}
},
{
"id":"QUERT",
"name":"Querine tRNA-ribosyltransferase",
"metabolites":{
"preq1_c":-1.0,
"preqtrna_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02325",
"subsystem":"tRNA modification: queuosine",
"notes":{
"original_bigg_ids":[
"QUERT"
]
},
"annotation":{
"bigg.reaction":[
"QUERT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_photon630_e",
"name":"Modeling: exchange reaction, photon absorption (620nm-640nm) ",
"metabolites":{
"photon630_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon630_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon630_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon650_e",
"name":"Modeling: exchange reaction, photon absorption (640nm-660nm) ",
"metabolites":{
"photon650_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon650_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon650_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon670_e",
"name":"Modeling: exchange reaction, photon absorption (660nm-680nm) ",
"metabolites":{
"photon670_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon670_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon670_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"EX_photon690_e",
"name":"Modeling: exchange reaction, photon absorption (680-700nm) ",
"metabolites":{
"photon690_e":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_photon690_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_photon690_e"
],
"sbo":"SBO:0000627"
}
},
{
"id":"PMEACPE",
"name":"Pimeloyl-[ACP] methyl ester esterase",
"metabolites":{
"h2o_c":-1.0,
"meoh_c":1.0,
"pimACP_c":1.0,
"pmeACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00145",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"PMEACPE"
]
},
"annotation":{
"bigg.reaction":[
"PMEACPE"
],
"biocyc":[
"META:RXN-11483"
],
"ec-code":[
"3.1.1.85"
],
"kegg.reaction":[
"R09725"
],
"metanetx.reaction":[
"MNXR103041"
],
"sbo":"SBO:0000176"
}
},
{
"id":"G3PAT160",
"name":"Glycerol-3-phosphate acyltransferase (C16:0)",
"metabolites":{
"1hdecg3p_c":1.0,
"ACP_c":1.0,
"glyc3p_c":-1.0,
"palmACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10435 and SYNPCC7942_RS07440",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"G3PAT160"
]
},
"annotation":{
"bigg.reaction":[
"G3PAT160"
],
"ec-code":[
"2.3.1.15"
],
"metanetx.reaction":[
"MNXR99857"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLUDGE_HDE_HDE",
"name":"Monoglucosyldiacylglycerol epimerase(16:1(9Z)/16:1(9Z))",
"metabolites":{
"glcdg161_c":-1.0,
"mgdg161_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04440",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGE_HDE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGE_HDE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"G3PAT161",
"name":"Glycerol-3-phosphate acyltransferase (C16:1)",
"metabolites":{
"1hdec9eg3p_c":1.0,
"ACP_c":1.0,
"glyc3p_c":-1.0,
"hdeACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10435 and SYNPCC7942_RS07440",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"G3PAT161"
]
},
"annotation":{
"bigg.reaction":[
"G3PAT161"
],
"ec-code":[
"2.3.1.15"
],
"metanetx.reaction":[
"MNXR99859"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HCO3tex",
"name":"Bicarbonate transport via diffusion (extracellular to periplasm)",
"metabolites":{
"hco3_e":-1.0,
"hco3_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"HCO3tex"
]
},
"annotation":{
"bigg.reaction":[
"HCO3tex"
],
"metanetx.reaction":[
"MNXR100484"
],
"reactome.reaction":[
"R-HSA-2752067",
"R-CFA-2752067",
"R-MMU-2752067",
"R-SSC-2752067",
"R-DRE-2752067",
"R-CEL-2752067",
"R-BTA-2752067",
"R-RNO-2752067",
"R-GGA-2752067",
"R-TGU-2752067",
"R-XTR-2752067",
"R-DME-2752067"
],
"rhea":[
"28697",
"28698",
"28695",
"28696"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn13310",
"rxn10826"
]
}
},
{
"id":"G3PAT1819Z_1",
"name":"Glycerol-3-phosphate: acyl-ACP acyltransferase (18:1(9Z))",
"metabolites":{
"1odec9eg3p_c":1.0,
"ACP_c":1.0,
"glyc3p_c":-1.0,
"octe9ACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10435 and SYNPCC7942_RS07440",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"G3PAT1819Z"
]
},
"annotation":{
"bigg.reaction":[
"G3PAT1819Z_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EPMEACPR",
"name":"Enoylpimeloyl-[ACP] methyl ester reductase",
"metabolites":{
"epmeACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pmeACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"EPMEACPR"
]
},
"annotation":{
"bigg.reaction":[
"EPMEACPR"
],
"ec-code":[
"1.3.1.10"
],
"kegg.reaction":[
"R10122"
],
"metanetx.reaction":[
"MNXR97945"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLUDGE_OLE_HDE",
"name":"Monoglucosyldiacylglycerol epimerase(18:1(9Z)/16:1(9Z))",
"metabolites":{
"glcdg1819Z1619Z_c":-1.0,
"mgdg1819Z1619Z_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04440",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGE_OLE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGE_OLE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLUDGE_OLE_PALM",
"name":"Monoglucosyldiacylglycerol epimerase(18:1(9Z)/16:0)",
"metabolites":{
"glcdg1819Z160_c":-1.0,
"mgdg1819Z160_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04440",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGE_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGE_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLUDGE_HDE_PALM",
"name":"Monoglucosyldiacylglycerol epimerase(16:1(9Z)/16:0)",
"metabolites":{
"glcdg1619Z160_c":-1.0,
"mgdg1619Z160_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04440",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGE_HDE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGE_HDE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLNtex",
"name":"L-glutamine transport via diffusion (extracellular to periplasm)",
"metabolites":{
"gln__L_e":-1.0,
"gln__L_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"GLNtex"
]
},
"annotation":{
"bigg.reaction":[
"GLNtex"
],
"biocyc":[
"META:TRANS-RXN-233"
],
"metanetx.reaction":[
"MNXR100259"
],
"reactome.reaction":[
"R-HSA-212651",
"R-BTA-212614",
"R-RNO-212614",
"R-SSC-212614",
"R-MMU-212614",
"R-HSA-212614",
"R-GGA-212614",
"R-CFA-212614",
"R-TGU-212614",
"R-SCE-212614"
],
"sabiork":[
"13421"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08625",
"rxn10928"
]
}
},
{
"id":"AGPAT161",
"name":"1-hexadec-7-enoyl-sn-glycerol 3-phosphate O-acyltransferase (n-C16:1)",
"metabolites":{
"1hdec9eg3p_c":-1.0,
"ACP_c":1.0,
"hdeACP_c":-1.0,
"pa161_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07455",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"AGPAT161"
]
},
"annotation":{
"bigg.reaction":[
"AGPAT161"
],
"ec-code":[
"2.3.1.51"
],
"metanetx.reaction":[
"MNXR95564"
],
"sbo":"SBO:0000176"
}
},
{
"id":"AGPATACP_OLE_HDE",
"name":"1-9-Octadecenoyl-sn-glycerol-3-phosphate O-acyltransferase (16:1(9Z)) (ACP Substrate)",
"metabolites":{
"1odec9eg3p_c":-1.0,
"ACP_c":1.0,
"hdeACP_c":-1.0,
"pa1819Z1619Z_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07455",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"AGPATACP_OLE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"AGPATACP_OLE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"AGPATACP_OLE_PALM",
"name":"1-9-Octadecenoyl-sn-glycerol-3-phosphate O-acyltransferase (16:0) (ACP Substrate)",
"metabolites":{
"1odec9eg3p_c":-1.0,
"ACP_c":1.0,
"pa1819Z160_c":1.0,
"palmACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07455",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"AGPATACP_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"AGPATACP_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLUDGS_OLE_HDE",
"name":"Monoglucosyldiacylglycerol synthase(18:1(9Z)/16:1(9Z))",
"metabolites":{
"12dgr1819Z1619Z_c":-1.0,
"glcdg1819Z1619Z_c":1.0,
"h_c":1.0,
"udp_c":1.0,
"udpg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05560",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGS_OLE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGS_OLE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CYNTtex",
"name":"Cyanate transport via diffusion (extracellular to periplasm)",
"metabolites":{
"cynt_e":-1.0,
"cynt_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"CYNTtex"
]
},
"annotation":{
"bigg.reaction":[
"CYNTtex"
],
"biocyc":[
"META:TRANS-RXN-14"
],
"metanetx.reaction":[
"MNXR96963"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08279"
]
}
},
{
"id":"GLUDGS_OLE_PALM",
"name":"Monoglucosyldiacylglycerol synthase(18:1(9Z)/16:0)",
"metabolites":{
"12dgr1819Z160_c":-1.0,
"glcdg1819Z160_c":1.0,
"h_c":1.0,
"udp_c":1.0,
"udpg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05560",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGS_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGS_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLUDGS_HDE_PALM",
"name":"Monoglucosyldiacylglycerol synthase(16:1(9Z)/16:0)",
"metabolites":{
"12dgr1619Z160_c":-1.0,
"glcdg1619Z160_c":1.0,
"h_c":1.0,
"udp_c":1.0,
"udpg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05560",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGS_HDE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGS_HDE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ARGtex",
"name":"L-arginine transport via diffusion (extracellular to periplasm)",
"metabolites":{
"arg__L_e":-1.0,
"arg__L_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"ARGtex"
]
},
"annotation":{
"bigg.reaction":[
"ARGtex"
],
"biocyc":[
"META:RXN66-448"
],
"metanetx.reaction":[
"MNXR95951"
],
"rhea":[
"32145",
"32143",
"32144",
"32146"
],
"sabiork":[
"7983"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10840",
"rxn08155"
]
}
},
{
"id":"GLUDGS_HDE_HDE",
"name":"Monoglucosyldiacylglycerol synthase(16:1(9Z)/16:1(9Z))",
"metabolites":{
"12dgr161_c":-1.0,
"glcdg161_c":1.0,
"h_c":1.0,
"udp_c":1.0,
"udpg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05560",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"GLUDGS_HDE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"GLUDGS_HDE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"TYRTRS",
"name":"Tyrosyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"trnatyr_c":-1.0,
"tyr__L_c":-1.0,
"tyrtrna_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13060",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"TYRTRS"
]
},
"annotation":{
"bigg.reaction":[
"TYRTRS"
],
"ec-code":[
"6.1.1.1"
],
"kegg.reaction":[
"R02918"
],
"metanetx.reaction":[
"MNXR105001"
],
"reactome.reaction":[
"R-HSA-379980",
"R-HSA-380170"
],
"sabiork":[
"354"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06280"
]
}
},
{
"id":"DAGK160",
"name":"Diacylglycerol kinase (n-C16:0)",
"metabolites":{
"12dgr160_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pa160_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02045",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DAGK160"
]
},
"annotation":{
"bigg.reaction":[
"DAGK160"
],
"ec-code":[
"2.7.1.107"
],
"metanetx.reaction":[
"MNXR97094"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MOBDtex",
"name":"Molybdate transport via diffusion (extracellular to periplasm)",
"metabolites":{
"mobd_e":-1.0,
"mobd_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"MOBDtex"
]
},
"annotation":{
"bigg.reaction":[
"MOBDtex"
],
"metanetx.reaction":[
"MNXR101690"
],
"rhea":[
"34909",
"34907",
"34910",
"34908"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08956"
]
}
},
{
"id":"DAGK_HDE_PALM",
"name":"Diacylglycerol kinase(16:1(9Z)/16:0)",
"metabolites":{
"12dgr1619Z160_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pa1619Z160_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02045",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DAGK_HDE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"DAGK_HDE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DAGK161",
"name":"Diacylglycerol kinase (n-C16:1)",
"metabolites":{
"12dgr161_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pa161_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02045",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DAGK161"
]
},
"annotation":{
"bigg.reaction":[
"DAGK161"
],
"metanetx.reaction":[
"MNXR97097"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NH4tex",
"name":"Ammonia transport via diffusion (extracellular to periplasm)",
"metabolites":{
"nh4_e":-1.0,
"nh4_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"NH4tex"
]
},
"annotation":{
"bigg.reaction":[
"NH4tex"
],
"biocyc":[
"META:TRANS-RXN0-206",
"META:RXN-9615",
"META:TRANS-RXN0-544"
],
"metanetx.reaction":[
"MNXR101950"
],
"reactome.reaction":[
"R-CEL-444416",
"R-SSC-444416",
"R-DDI-444416",
"R-MMU-444416",
"R-DRE-444416",
"R-GGA-444416",
"R-CFA-444416",
"R-HSA-444416",
"R-XTR-444416",
"R-BTA-444416",
"R-RNO-444416",
"R-TGU-444416",
"R-DME-444416"
],
"rhea":[
"28749",
"28748",
"28750",
"28747"
],
"sabiork":[
"11683"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn13364",
"rxn09835",
"rxn05466",
"rxn08987",
"rxn08986",
"rxn09736"
]
}
},
{
"id":"SQDGS_PALM_PALM",
"name":"Sulfoquinovosyldiacylglycerol synthase(16:0/16:0)",
"metabolites":{
"12dgr160_c":-1.0,
"h_c":1.0,
"sqdg160_c":1.0,
"udp_c":1.0,
"udpsq_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02945",
"subsystem":"Sulfolipid biosynthesis",
"notes":{
"original_bigg_ids":[
"SQDGS_PALM_PALM"
]
},
"annotation":{
"bigg.reaction":[
"SQDGS_PALM_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SO4tex",
"name":"Sulfate transport via diffusion (extracellular to periplasm)",
"metabolites":{
"so4_e":-1.0,
"so4_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"SO4tex"
]
},
"annotation":{
"bigg.reaction":[
"SO4tex"
],
"metanetx.reaction":[
"MNXR104469"
],
"reactome.reaction":[
"R-TGU-8875871",
"R-DRE-8875871",
"R-GGA-8875871",
"R-BTA-8875871",
"R-SCE-8875871",
"R-HSA-8875871",
"R-SPO-8875871",
"R-XTR-8875871",
"R-MMU-8875871",
"R-RNO-8875871",
"R-SSC-8875871",
"R-PFA-8875871",
"R-ATH-8875871",
"R-CFA-8875871",
"R-OSA-8875871",
"R-DME-8875871"
],
"rhea":[
"34983",
"34984",
"34986",
"34985"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09261",
"rxn05238"
]
}
},
{
"id":"SQDGS_HDE_PALM",
"name":"Sulfoquinovosyldiacylglycerol synthase(16:1(9Z)/16:0)",
"metabolites":{
"12dgr1619Z160_c":-1.0,
"h_c":1.0,
"sqdg1619Z160_c":1.0,
"udp_c":1.0,
"udpsq_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02945",
"subsystem":"Sulfolipid biosynthesis",
"notes":{
"original_bigg_ids":[
"SQDGS_HDE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"SQDGS_HDE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PGPS_OLE_PALM",
"name":"Phosphatidylglycerol phosphate synthetase (18:1(9Z)/16:0)",
"metabolites":{
"cdp12dgr1819Z160_c":-1.0,
"cmp_c":1.0,
"glyc3p_c":-1.0,
"h_c":1.0,
"pgp1819Z160_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09260",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"PGPS_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"PGPS_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGS_HDE_PALM",
"name":"UDP-galactose-dependent DGDG synthase(16:1(9Z)/16:0)",
"metabolites":{
"dgdg1619Z160_c":1.0,
"h_c":1.0,
"mgdg1619Z160_c":-1.0,
"udp_c":1.0,
"udpgal_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05065",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DGDGS_HDE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"DGDGS_HDE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PTRCtex",
"name":"Putrescine transport via diffusion (extracellular to periplasm)",
"metabolites":{
"ptrc_e":-1.0,
"ptrc_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"PTRCtex"
]
},
"annotation":{
"bigg.reaction":[
"PTRCtex"
],
"metanetx.reaction":[
"MNXR103339"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09216",
"rxn13393"
]
}
},
{
"id":"DGDGS_HDE_HDE",
"name":"UDP-galactose-dependent DGDG synthase(16:1(9Z)/16:1(9Z))",
"metabolites":{
"dgdg161_c":1.0,
"h_c":1.0,
"mgdg161_c":-1.0,
"udp_c":1.0,
"udpgal_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05065",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DGDGS_HDE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"DGDGS_HDE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NO3tex",
"name":"Nitrate transport via diffusion (extracellular to periplasm)",
"metabolites":{
"no3_e":-1.0,
"no3_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"NO3tex"
]
},
"annotation":{
"bigg.reaction":[
"NO3tex"
],
"metanetx.reaction":[
"MNXR101992"
],
"rhea":[
"34924",
"34926",
"34923",
"34925"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09005",
"rxn10935"
]
}
},
{
"id":"DGDGS_OLE_HDE",
"name":"UDP-galactose-dependent DGDG synthase(18:1(9Z)/16:1(9Z))",
"metabolites":{
"dgdg1819Z1619Z_c":1.0,
"h_c":1.0,
"mgdg1819Z1619Z_c":-1.0,
"udp_c":1.0,
"udpgal_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05065",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DGDGS_OLE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"DGDGS_OLE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DGDGS_OLE_PALM",
"name":"UDP-galactose-dependent DGDG synthase(18:1(9Z)/16:0)",
"metabolites":{
"dgdg1819Z160Z_c":1.0,
"h_c":1.0,
"mgdg1819Z160_c":-1.0,
"udp_c":1.0,
"udpgal_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05065",
"subsystem":"Galactoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DGDGS_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"DGDGS_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CDPDAGS_OLE_PALM",
"name":"CDP-diacylglycerol synthase (18:1(9Z)/16:0)",
"metabolites":{
"cdp12dgr1819Z160_c":1.0,
"ctp_c":-1.0,
"h_c":-1.0,
"pa1819Z160_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02010",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"CDPDAGS_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"CDPDAGS_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLNTRS",
"name":"Glutaminyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"gln__L_c":-1.0,
"glntrna_c":1.0,
"ppi_c":1.0,
"trnagln_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00590 and SYNPCC7942_RS10735 and SYNPCC7942_RS11805 and SYNPCC7942_RS12160",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"GLNTRS"
]
},
"annotation":{
"bigg.reaction":[
"GLNTRS"
],
"ec-code":[
"6.1.1.18"
],
"kegg.reaction":[
"R03652"
],
"metanetx.reaction":[
"MNXR100257"
],
"reactome.reaction":[
"R-HSA-379982",
"R-HSA-380241"
],
"sabiork":[
"3430"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06437"
]
}
},
{
"id":"METTRS",
"name":"Methionyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"met__L_c":-1.0,
"mettrna_c":1.0,
"ppi_c":1.0,
"trnamet_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05845",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"METTRS"
]
},
"annotation":{
"bigg.reaction":[
"METTRS"
],
"ec-code":[
"6.1.1.10"
],
"kegg.reaction":[
"R03659"
],
"metanetx.reaction":[
"MNXR101488"
],
"sabiork":[
"355"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06443"
]
}
},
{
"id":"SERTRS",
"name":"Seryl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"ser__L_c":-1.0,
"sertrna_c":1.0,
"trnaser_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02295",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"SERTRS"
]
},
"annotation":{
"bigg.reaction":[
"SERTRS"
],
"ec-code":[
"6.1.1.11"
],
"kegg.reaction":[
"R03662"
],
"metanetx.reaction":[
"MNXR104350"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06446"
]
}
},
{
"id":"NAtex",
"name":"Sodium transport via diffusion (extracellular to periplasm)",
"metabolites":{
"na1_e":-1.0,
"na1_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"NAtex"
]
},
"annotation":{
"bigg.reaction":[
"NAtex"
],
"biocyc":[
"META:TRANS-RXN-189"
],
"metanetx.reaction":[
"MNXR101804"
],
"reactome.reaction":[
"R-TGU-2671885",
"R-MMU-3295580",
"R-GGA-5576895",
"R-GGA-2672334",
"R-BTA-2672334",
"R-DRE-2671885",
"R-MMU-2730664",
"R-BTA-3295580",
"R-BTA-2730664",
"R-CFA-3295580",
"R-XTR-2672334",
"R-RNO-2671885",
"R-HSA-2671885",
"R-RNO-2730664",
"R-SSC-2671885",
"R-HSA-3295580",
"R-SSC-2672334",
"R-TGU-2672334",
"R-DRE-5576895",
"R-CEL-2730664",
"R-HSA-5576895",
"R-MMU-2672334",
"R-BTA-5576895",
"R-TGU-2730664",
"R-CFA-2672334",
"R-HSA-2730664",
"R-CFA-5576895",
"R-XTR-2671885",
"R-XTR-5576895",
"R-CFA-2730664",
"R-DME-2730664",
"R-XTR-3295580",
"R-GGA-3295580",
"R-BTA-2671885",
"R-DRE-3295580",
"R-MMU-2671885",
"R-SSC-3295580",
"R-CEL-3295580",
"R-GGA-2671885",
"R-GGA-2730664",
"R-HSA-2672334",
"R-SSC-5576895",
"R-CEL-2671885",
"R-DME-3295580",
"R-RNO-2672334",
"R-RNO-3295580",
"R-MMU-5576895",
"R-RNO-5576895",
"R-TGU-3295580",
"R-XTR-2730664",
"R-CFA-2671885"
],
"rhea":[
"34963",
"34966",
"34965",
"34964"
],
"sabiork":[
"12962"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08985",
"rxn10899"
]
}
},
{
"id":"PROTRS",
"name":"Prolyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"pro__L_c":-1.0,
"protrna_c":1.0,
"trnapro_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09940",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"PROTRS"
]
},
"annotation":{
"bigg.reaction":[
"PROTRS"
],
"ec-code":[
"6.1.1.15"
],
"kegg.reaction":[
"R03661"
],
"metanetx.reaction":[
"MNXR103208"
],
"reactome.reaction":[
"R-HSA-380198",
"R-HSA-379865"
],
"sabiork":[
"404"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06445"
]
}
},
{
"id":"GLYTRS",
"name":"Glycyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"gly_c":-1.0,
"glytrna_c":1.0,
"ppi_c":1.0,
"trnagly_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00095 and SYNPCC7942_RS12485",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"GLYTRS"
]
},
"annotation":{
"bigg.reaction":[
"GLYTRS"
],
"ec-code":[
"6.1.1.14"
],
"kegg.reaction":[
"R03654"
],
"metanetx.reaction":[
"MNXR100365"
],
"reactome.reaction":[
"R-HSA-380240",
"R-HSA-380048"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06438"
]
}
},
{
"id":"CYSTRS",
"name":"Cysteinyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"cys__L_c":-1.0,
"cystrna_c":1.0,
"ppi_c":1.0,
"trnacys_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08475",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"CYSTRS"
]
},
"annotation":{
"bigg.reaction":[
"CYSTRS"
],
"ec-code":[
"6.1.1.16",
"6.1.1.15"
],
"kegg.reaction":[
"R03650"
],
"metanetx.reaction":[
"MNXR97018"
],
"reactome.reaction":[
"R-HSA-379887",
"R-HSA-380158"
],
"sabiork":[
"405"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06435"
]
}
},
{
"id":"CA2tex",
"name":"Calcium (Ca+2) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"ca2_e":-1.0,
"ca2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"CA2tex"
]
},
"annotation":{
"bigg.reaction":[
"CA2tex"
],
"biocyc":[
"META:TRANS-RXN0-497",
"META:TRANS-RXN-144"
],
"ec-code":[
"3.6.3.8"
],
"metanetx.reaction":[
"MNXR96436"
],
"reactome.reaction":[
"R-HSA-210420",
"R-GGA-139855",
"R-HSA-432164",
"R-HSA-8863009",
"R-DME-2089943",
"R-CEL-2089943",
"R-CFA-3295579",
"R-TGU-5577213",
"R-SSC-2685505",
"R-RNO-210420",
"R-RNO-418309",
"R-TGU-5263618",
"R-DME-139854",
"R-SCE-418309",
"R-SSC-2534359",
"R-SSC-5263618",
"R-DRE-5263618",
"R-GGA-265645",
"R-RNO-3295579",
"R-ATH-2685505",
"R-TGU-265645",
"R-XTR-5263618",
"R-XTR-139854",
"R-XTR-418309",
"R-MMU-5263618",
"R-TGU-139854",
"R-GGA-418309",
"R-SSC-139854",
"R-CFA-418309",
"R-CEL-432164",
"R-SSC-2855020",
"R-DME-432164",
"R-DRE-139855",
"R-CEL-3295579",
"R-CFA-2089943",
"R-CFA-265645",
"R-GGA-432164",
"R-RNO-432164",
"R-MMU-2089943",
"R-GGA-2855020",
"R-CFA-2534359",
"R-RNO-182097",
"R-SSC-139855",
"R-CEL-139854",
"R-DRE-432164",
"R-SSC-418309",
"R-RNO-139854",
"R-DME-3295579",
"R-TGU-3295579",
"R-HSA-5263618",
"R-DDI-2685505",
"R-HSA-2534359",
"R-TGU-139855",
"R-XTR-5577213",
"R-CFA-5577213",
"R-DDI-3295579",
"R-HSA-2685505",
"R-XTR-210420",
"R-HSA-3295579",
"R-HSA-2855020",
"R-GGA-210420",
"R-DRE-2089943",
"R-CFA-2855020",
"R-RNO-139855",
"R-DME-418309",
"R-MMU-432164",
"R-BTA-139855",
"R-HSA-139854",
"R-DDI-418309",
"R-HSA-5577213",
"R-GGA-2089943",
"R-BTA-139854",
"R-CFA-2685505",
"R-MMU-2855020",
"R-HSA-418309",
"R-BTA-5577213",
"R-HSA-434798",
"R-XTR-2089943",
"R-BTA-2685505",
"R-MMU-418309",
"R-SSC-210420",
"R-HSA-169683",
"R-SSC-2089943",
"R-DRE-5577213",
"R-ATH-418309",
"R-RNO-2089943",
"R-RNO-265645",
"R-BTA-2855020",
"R-XTR-3295579",
"R-MMU-2685505",
"R-MMU-265645",
"R-CFA-139855",
"R-TGU-2685505",
"R-CFA-139854",
"R-CEL-418309",
"R-GGA-2685505",
"R-GGA-139854",
"R-XTR-2855020",
"R-BTA-265645",
"R-RNO-5263618",
"R-SSC-3295579",
"R-HSA-2089943",
"R-TGU-2855020",
"R-BTA-418309",
"R-DRE-139854",
"R-DRE-265645",
"R-GGA-3295579",
"R-XTR-2685505",
"R-BTA-2089943",
"R-MMU-210420",
"R-XTR-139855",
"R-SSC-265645",
"R-CFA-210420",
"R-XTR-265645",
"R-DME-434802",
"R-TGU-418309",
"R-MMU-3295579",
"R-RNO-2855020",
"R-SSC-5577213",
"R-OSA-2685505",
"R-HSA-4420052",
"R-DRE-2855020",
"R-BTA-5263618",
"R-GGA-5263618",
"R-CEL-5263618",
"R-RNO-2685505",
"R-GGA-5577213",
"R-BTA-210420",
"R-DRE-3295579",
"R-HSA-139855",
"R-DRE-210420",
"R-DRE-2685505",
"R-RNO-2534359",
"R-TGU-2089943",
"R-CFA-5263618",
"R-MMU-2534359",
"R-TGU-432164",
"R-BTA-2534359",
"R-MMU-139855",
"R-MMU-5577213",
"R-CFA-432164",
"R-XTR-432164",
"R-CEL-265645",
"R-SPO-418309",
"R-RNO-5577213",
"R-HSA-265645",
"R-OSA-418309",
"R-DRE-418309",
"R-BTA-3295579",
"R-TGU-210420",
"R-MMU-139854",
"R-SSC-432164",
"R-BTA-432164",
"R-DME-5263618"
],
"rhea":[
"29671",
"29674",
"29673",
"29672"
],
"sabiork":[
"12376"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08186"
]
}
},
{
"id":"ARGTRS",
"name":"Arginyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"arg__L_c":-1.0,
"argtrna_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"trnaarg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08055",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"ARGTRS"
]
},
"annotation":{
"bigg.reaction":[
"ARGTRS"
],
"ec-code":[
"6.1.1.19"
],
"kegg.reaction":[
"R03646"
],
"metanetx.reaction":[
"MNXR95950"
],
"reactome.reaction":[
"R-HSA-379993",
"R-HSA-380224"
],
"sabiork":[
"407"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06432"
]
}
},
{
"id":"Ktex",
"name":"Potassium transport via diffusion (extracellular to periplasm)",
"metabolites":{
"k_e":-1.0,
"k_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"Ktex"
]
},
"annotation":{
"bigg.reaction":[
"Ktex"
],
"biocyc":[
"META:TRANS-RXN-190",
"META:TRANS-RXN-186",
"META:TRANS-RXN-185",
"META:TRANS-RXN-143",
"META:TRANS-RXN-187"
],
"metanetx.reaction":[
"MNXR100950"
],
"reactome.reaction":[
"R-CEL-1296046",
"R-CFA-1299297",
"R-DRE-1296127",
"R-CEL-1296035",
"R-GGA-1299318",
"R-XTR-1296046",
"R-RNO-5678261",
"R-ATH-1296043",
"R-MMU-877187",
"R-SSC-1296037",
"R-BTA-1299359",
"R-TGU-1296024",
"R-TGU-1296127",
"R-TGU-5678261",
"R-RNO-1296348",
"R-DME-5577234",
"R-RNO-1299297",
"R-HSA-5577050",
"R-DRE-1296037",
"R-DRE-1296024",
"R-XTR-5577050",
"R-MMU-1296348",
"R-RNO-5578910",
"R-DRE-5578910",
"R-RNO-1296024",
"R-CFA-1369017",
"R-TGU-1296348",
"R-RNO-2534365",
"R-GGA-1296045",
"R-CFA-5678261",
"R-XTR-1369017",
"R-DRE-1296043",
"R-GGA-1013020",
"R-HSA-5577234",
"R-CEL-1299338",
"R-CFA-1296043",
"R-BTA-1296127",
"R-HSA-5578910",
"R-BTA-1299338",
"R-BTA-1299318",
"R-RNO-5577237",
"R-HSA-1299359",
"R-CEL-1299318",
"R-HSA-1299318",
"R-DRE-1299304",
"R-MMU-1013020",
"R-XTR-1296039",
"R-TGU-1296045",
"R-BTA-1296045",
"R-XTR-1296037",
"R-SSC-5678261",
"R-MMU-1299297",
"R-DME-1296348",
"R-HSA-5683209",
"R-BTA-5578910",
"R-CFA-1296046",
"R-DME-1296035",
"R-CFA-1299359",
"R-HSA-1296043",
"R-DRE-1296039",
"R-GGA-1296348",
"R-XTR-1296043",
"R-SSC-2534365",
"R-XTR-5678261",
"R-CEL-1013020",
"R-GGA-1296127",
"R-MMU-1296039",
"R-HSA-1299304",
"R-BTA-1299304",
"R-DME-1296043",
"R-BTA-1296024",
"R-RNO-1296037",
"R-CFA-1296024",
"R-CFA-1013020",
"R-HSA-1296046",
"R-CFA-1296037",
"R-CEL-1299297",
"R-BTA-5577237",
"R-DME-1296039",
"R-TGU-1299359",
"R-CFA-1296127",
"R-HSA-1369017",
"R-RNO-1296046",
"R-XTR-1299338",
"R-DRE-5678261",
"R-XTR-5577234",
"R-HSA-1296024",
"R-RNO-1296045",
"R-GGA-5578910",
"R-DRE-1299338",
"R-GGA-1296046",
"R-RNO-1369017",
"R-CEL-1296045",
"R-DRE-5577050",
"R-DRE-1013020",
"R-BTA-1299297",
"R-SSC-1299338",
"R-SSC-1369017",
"R-GGA-5577050",
"R-CEL-1299359",
"R-BTA-5678261",
"R-BTA-1296043",
"R-RNO-1296127",
"R-OSA-1296043",
"R-CFA-5577050",
"R-CFA-5577234",
"R-SSC-1296045",
"R-MMU-1299304",
"R-MMU-1369017",
"R-SSC-1299304",
"R-MMU-1296035",
"R-HSA-1296035",
"R-TGU-1296037",
"R-GGA-1296039",
"R-SSC-5578910",
"R-GGA-1296024",
"R-CFA-1299304",
"R-GGA-5577234",
"R-RNO-1299338",
"R-DME-1296127",
"R-HSA-877187",
"R-DRE-1369017",
"R-HSA-1296348",
"R-BTA-1296348",
"R-MMU-1296043",
"R-RNO-1013020",
"R-MMU-1296127",
"R-RNO-5577050",
"R-CFA-1296045",
"R-BTA-1296039",
"R-RNO-5577234",
"R-TGU-1299338",
"R-RNO-1296039",
"R-TGU-1296039",
"R-XTR-1296127",
"R-SSC-1296039",
"R-DME-1296046",
"R-MMU-1299359",
"R-CEL-1296348",
"R-BTA-1296046",
"R-RNO-1299318",
"R-MMU-1299338",
"R-DRE-877187",
"R-MMU-5577050",
"R-BTA-1296037",
"R-RNO-1299359",
"R-GGA-1296043",
"R-DME-1013020",
"R-HSA-1299338",
"R-XTR-1296348",
"R-XTR-1299318",
"R-GGA-1299338",
"R-DRE-5577234",
"R-SSC-1296046",
"R-XTR-5578910",
"R-CFA-1296035",
"R-CFA-1296348",
"R-CFA-5577237",
"R-SSC-1296024",
"R-CEL-5577234",
"R-CFA-5578910",
"R-DRE-1296035",
"R-SSC-1296043",
"R-CFA-1299338",
"R-GGA-877187",
"R-HSA-5678261",
"R-CFA-2534365",
"R-HSA-1296127",
"R-HSA-1013020",
"R-BTA-5577234",
"R-DRE-1296348",
"R-MMU-1296024",
"R-BTA-1296035",
"R-DME-1299318",
"R-MMU-1296037",
"R-DRE-1296045",
"R-DRE-5577237",
"R-TGU-5577234",
"R-SSC-1299359",
"R-MMU-5578910",
"R-SSC-1013020",
"R-MMU-1296045",
"R-HSA-1296045",
"R-XTR-1296045",
"R-TGU-1299304",
"R-RNO-877187",
"R-MMU-2534365",
"R-CFA-877187",
"R-DRE-1296046",
"R-DRE-1299359",
"R-TGU-1296046",
"R-DME-1299338",
"R-TGU-5578910",
"R-RNO-1296035",
"R-SSC-1296348",
"R-XTR-1299359",
"R-MMU-5678261",
"R-SSC-1296127",
"R-BTA-1013020",
"R-CEL-5578910",
"R-GGA-1296037",
"R-GGA-5577237",
"R-XTR-1299304",
"R-GGA-5678261",
"R-SSC-1299297",
"R-MMU-1296046",
"R-TGU-5577050",
"R-DME-5578910",
"R-BTA-5577050",
"R-RNO-1299304",
"R-TGU-1013020",
"R-GGA-1299359",
"R-XTR-1013020",
"R-MMU-5577234",
"R-MMU-5577237",
"R-TGU-1369017",
"R-RNO-1296043",
"R-TGU-1296043",
"R-XTR-1296035",
"R-HSA-1296037",
"R-SSC-1296035",
"R-SSC-877187",
"R-CFA-1299318",
"R-DME-1296045",
"R-GGA-1296035",
"R-HSA-1299297",
"R-CFA-1296039",
"R-BTA-2534365",
"R-DME-1299359",
"R-BTA-877187",
"R-HSA-2534365",
"R-GGA-1369017",
"R-XTR-5577237",
"R-HSA-5577237",
"R-SSC-5577234",
"R-HSA-1296039",
"R-CEL-1296039",
"R-XTR-877187",
"R-SSC-5577237",
"R-DRE-1299318",
"R-GGA-1299304",
"R-BTA-1369017",
"R-MMU-1299318"
],
"rhea":[
"29463",
"29464",
"29466",
"29465"
],
"sabiork":[
"7044"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05206",
"rxn08771"
]
}
},
{
"id":"TRPTRS",
"name":"Tryptophanyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"trnatrp_c":-1.0,
"trp__L_c":-1.0,
"trptrna_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06690",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"TRPTRS"
]
},
"annotation":{
"bigg.reaction":[
"TRPTRS"
],
"ec-code":[
"6.1.1.2"
],
"kegg.reaction":[
"R03664"
],
"metanetx.reaction":[
"MNXR104948"
],
"reactome.reaction":[
"R-HSA-379977",
"R-HSA-380222"
],
"sabiork":[
"408"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06448"
]
}
},
{
"id":"HISTRS",
"name":"Histidyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"his__L_c":-1.0,
"histrna_c":1.0,
"ppi_c":1.0,
"trnahis_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11500",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"HISTRS"
]
},
"annotation":{
"bigg.reaction":[
"HISTRS"
],
"ec-code":[
"6.1.1.21"
],
"kegg.reaction":[
"R03655"
],
"metanetx.reaction":[
"MNXR100643"
],
"reactome.reaction":[
"R-HSA-380234",
"R-HSA-379844"
],
"sabiork":[
"410"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06439"
]
}
},
{
"id":"CO2tpp",
"name":"CO2 transporter via diffusion (periplasm)",
"metabolites":{
"co2_c":1.0,
"co2_p":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"CO2tpp"
]
},
"annotation":{
"bigg.reaction":[
"CO2tpp"
],
"biocyc":[
"META:TRANS-RXN0-545"
],
"metanetx.reaction":[
"MNXR96810"
],
"reactome.reaction":[
"R-DDI-1247645",
"R-CFA-1237069",
"R-TGU-1247649",
"R-CFA-1237042",
"R-CEL-1247645",
"R-XTR-1237069",
"R-HSA-1247645",
"R-OSA-1237042",
"R-GGA-1237042",
"R-BTA-1247645",
"R-GGA-1247649",
"R-RNO-1247645",
"R-XTR-1247645",
"R-TGU-1237042",
"R-SCE-1247649",
"R-MMU-1247649",
"R-CFA-1247649",
"R-GGA-1247645",
"R-SSC-1247645",
"R-BTA-1237069",
"R-RNO-1237069",
"R-SCE-1237042",
"R-DDI-1247649",
"R-SSC-1237042",
"R-DRE-1247649",
"R-DRE-1237042",
"R-DDI-1237042",
"R-DME-1237042",
"R-MMU-1237042",
"R-SSC-1247649",
"R-TGU-1237069",
"R-BTA-1247649",
"R-CFA-1247645",
"R-RNO-1247649",
"R-HSA-1237069",
"R-CEL-1237069",
"R-DDI-1237069",
"R-MMU-1237069",
"R-DME-1247645",
"R-ATH-1237042",
"R-OSA-1247649",
"R-HSA-1237042",
"R-DRE-1247645",
"R-HSA-1247649",
"R-MMU-1247645",
"R-DME-1237069",
"R-RNO-1237042",
"R-TGU-1247645",
"R-BTA-1237042",
"R-GGA-1237069",
"R-DME-1247649",
"R-SSC-1237069",
"R-DRE-1237069",
"R-ATH-1247649"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05467",
"rxn08237",
"rxn09706",
"rxn09821",
"rxn09775",
"rxn09876",
"rxn08238",
"rxn09860"
]
}
},
{
"id":"PHETRS",
"name":"Phenylalanyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"phe__L_c":-1.0,
"phetrna_c":1.0,
"ppi_c":1.0,
"trnaphe_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06615 and SYNPCC7942_RS10470",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"PHETRS"
]
},
"annotation":{
"bigg.reaction":[
"PHETRS"
],
"ec-code":[
"6.1.1.20"
],
"kegg.reaction":[
"R03660"
],
"metanetx.reaction":[
"MNXR102634"
],
"reactome.reaction":[
"R-HSA-379848",
"R-HSA-380203"
],
"sabiork":[
"409"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06444"
]
}
},
{
"id":"EX_pi_e",
"name":"Phosphate exchange",
"metabolites":{
"pi_e":-1.0
},
"lower_bound":-0.023,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_pi_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_pi_e"
],
"biocyc":[
"META:TRANS-RXN0-470"
],
"metanetx.reaction":[
"MNXR102871"
],
"rhea":[
"32824",
"32826",
"32825",
"32823"
],
"sabiork":[
"10985"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn10838",
"rxn09722",
"rxn09121",
"rxn13178"
]
}
},
{
"id":"ASNTRS",
"name":"Asparaginyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"asn__L_c":-1.0,
"asntrna_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"trnaasn_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04290",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"ASNTRS"
]
},
"annotation":{
"bigg.reaction":[
"ASNTRS"
],
"ec-code":[
"6.1.1.22"
],
"kegg.reaction":[
"R03648"
],
"metanetx.reaction":[
"MNXR96064"
],
"reactome.reaction":[
"R-HSA-380227",
"R-HSA-379996"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11114",
"rxn06434"
]
}
},
{
"id":"ASPTRS",
"name":"Aspartyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"asp__L_c":-1.0,
"asptrna_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"trnaasp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06715",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"ASPTRS"
]
},
"annotation":{
"bigg.reaction":[
"ASPTRS"
],
"ec-code":[
"6.1.1.12",
"6.1.1.23"
],
"kegg.reaction":[
"R05577"
],
"metanetx.reaction":[
"MNXR96101"
],
"sabiork":[
"402"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06936"
]
}
},
{
"id":"UDPGLDC",
"name":"UDP-D-glucuronate decarboxylase",
"metabolites":{
"co2_c":1.0,
"h_c":-1.0,
"udpglcur_c":-1.0,
"udpxyl_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05885",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"UDPGLDC"
]
},
"annotation":{
"bigg.reaction":[
"UDPGLDC"
],
"biocyc":[
"META:UDP-GLUCURONATE-DECARBOXYLASE-RXN"
],
"ec-code":[
"4.1.1.35"
],
"kegg.reaction":[
"R01384"
],
"metanetx.reaction":[
"MNXR105068"
],
"rhea":[
"23916",
"23919",
"23918",
"23917"
],
"sabiork":[
"9400"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01007"
]
}
},
{
"id":"PItex",
"name":"Phosphate transport via diffusion (extracellular to periplasm)",
"metabolites":{
"pi_e":-1.0,
"pi_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"PItex"
]
},
"annotation":{
"bigg.reaction":[
"PItex"
],
"biocyc":[
"META:TRANS-RXN0-470"
],
"metanetx.reaction":[
"MNXR102871"
],
"rhea":[
"32824",
"32826",
"32825",
"32823"
],
"sabiork":[
"10985"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10838",
"rxn09722",
"rxn09121",
"rxn13178"
]
}
},
{
"id":"AGTi",
"name":"Alanine glyoxylate aminotransferase  irreversible ",
"metabolites":{
"ala__L_c":-1.0,
"glx_c":-1.0,
"gly_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10975",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"AGTi"
]
},
"annotation":{
"bigg.reaction":[
"AGTi"
],
"biocyc":[
"META:ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"
],
"ec-code":[
"2.6.1.44"
],
"kegg.reaction":[
"R00369"
],
"metanetx.reaction":[
"MNXR95618"
],
"reactome.reaction":[
"R-SCE-904864",
"R-RNO-389684",
"R-SCE-389684",
"R-DDI-389684",
"R-GGA-389684",
"R-DRE-389684",
"R-CFA-904864",
"R-CEL-904864",
"R-DME-904864",
"R-XTR-904864",
"R-OSA-904864",
"R-SPO-904864",
"R-CEL-389684",
"R-CFA-389684",
"R-SSC-904864",
"R-OSA-389684",
"R-ATH-904864",
"R-DME-389684",
"R-BTA-389684",
"R-GGA-904864",
"R-MMU-904864",
"R-TGU-904864",
"R-RNO-904864",
"R-BTA-904864",
"R-SSC-389684",
"R-HSA-389684",
"R-XTR-389684",
"R-HSA-904864",
"R-MMU-389684",
"R-TGU-389684",
"R-DRE-904864",
"R-ATH-389684"
],
"rhea":[
"24248",
"24251",
"24250",
"24249"
],
"sabiork":[
"836"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00272"
]
}
},
{
"id":"DBTS",
"name":"Dethiobiotin synthase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"co2_c":-1.0,
"dann_c":-1.0,
"dtbt_c":1.0,
"h_c":3.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00155",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"DBTS"
]
},
"annotation":{
"bigg.reaction":[
"DBTS"
],
"biocyc":[
"META:DETHIOBIOTIN-SYN-RXN"
],
"ec-code":[
"6.3.3.3"
],
"kegg.reaction":[
"R03182"
],
"metanetx.reaction":[
"MNXR97180"
],
"rhea":[
"15807",
"15808",
"15806",
"15805"
],
"sabiork":[
"3011"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02277"
]
}
},
{
"id":"THRTRS",
"name":"Threonyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"thr__L_c":-1.0,
"thrtrna_c":1.0,
"trnathr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13275",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"THRTRS"
]
},
"annotation":{
"bigg.reaction":[
"THRTRS"
],
"ec-code":[
"6.1.1.3"
],
"kegg.reaction":[
"R03663"
],
"metanetx.reaction":[
"MNXR104848"
],
"reactome.reaction":[
"R-HSA-380002",
"R-HSA-380201"
],
"sabiork":[
"391"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06447"
]
}
},
{
"id":"LEUTRS",
"name":"Leucyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"leu__L_c":-1.0,
"leutrna_c":1.0,
"ppi_c":1.0,
"trnaleu_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09745",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"LEUTRS"
]
},
"annotation":{
"bigg.reaction":[
"LEUTRS"
],
"ec-code":[
"6.1.1.4"
],
"kegg.reaction":[
"R03657"
],
"metanetx.reaction":[
"MNXR101053"
],
"reactome.reaction":[
"R-HSA-379974",
"R-HSA-380200"
],
"sabiork":[
"412"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06441"
]
}
},
{
"id":"ILETRS",
"name":"Isoleucyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"ile__L_c":-1.0,
"iletrna_c":1.0,
"ppi_c":1.0,
"trnaile_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12380",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"ILETRS"
]
},
"annotation":{
"bigg.reaction":[
"ILETRS"
],
"ec-code":[
"6.1.1.5"
],
"kegg.reaction":[
"R03656"
],
"metanetx.reaction":[
"MNXR100820"
],
"reactome.reaction":[
"R-HSA-380176",
"R-HSA-379893"
],
"sabiork":[
"413"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06440"
]
}
},
{
"id":"CHLADMT_1",
"name":"Chlorophyll Mg dechelatase",
"metabolites":{
"cholphya_c":-1.0,
"h_c":-2.0,
"mg2_c":1.0,
"phptna_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"CHLADMT"
]
},
"annotation":{
"bigg.reaction":[
"CHLADMT_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"LYSTRS",
"name":"Lysyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"lys__L_c":-1.0,
"lystrna_c":1.0,
"ppi_c":1.0,
"trnalys_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12270",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"LYSTRS"
]
},
"annotation":{
"bigg.reaction":[
"LYSTRS"
],
"ec-code":[
"6.1.1.6"
],
"kegg.reaction":[
"R03658"
],
"metanetx.reaction":[
"MNXR101264"
],
"reactome.reaction":[
"R-HSA-380008",
"R-HSA-380233"
],
"sabiork":[
"414"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08857",
"rxn06442"
]
}
},
{
"id":"AOXSr2",
"name":"8-amino-7-oxononanoate synthase",
"metabolites":{
"8aonn_c":1.0,
"ACP_c":1.0,
"ala__L_c":-1.0,
"co2_c":1.0,
"pimACP_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00140",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"AOXSr2"
]
},
"annotation":{
"bigg.reaction":[
"AOXSr2"
],
"biocyc":[
"META:RXN-11484"
],
"ec-code":[
"2.3.1.47"
],
"kegg.reaction":[
"R10124"
],
"metanetx.reaction":[
"MNXR95855"
],
"sbo":"SBO:0000176"
}
},
{
"id":"AMAOTr",
"name":"Adenosylmethionine-8-amino-7-oxononanoate transaminase",
"metabolites":{
"8aonn_c":-1.0,
"amet_c":-1.0,
"amob_c":1.0,
"dann_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00160",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"AMAOTr"
]
},
"annotation":{
"bigg.reaction":[
"AMAOTr"
],
"biocyc":[
"META:DAPASYN-RXN"
],
"ec-code":[
"2.6.1.62"
],
"kegg.reaction":[
"R03231"
],
"metanetx.reaction":[
"MNXR95806"
],
"rhea":[
"16863",
"16861",
"16862",
"16864"
],
"sabiork":[
"3057"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02312"
]
}
},
{
"id":"LIPOS2",
"name":"Lipoate synthase",
"metabolites":{
"ala__L_c":2.0,
"amet_c":-2.0,
"cys__L_c":-2.0,
"dad_5_c":2.0,
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"lipopb_c":1.0,
"met__L_c":2.0,
"octapb_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11955 and SYNPCC7942_RS09790 and SYNPCC7942_RS02300",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"LIPOS2"
]
},
"annotation":{
"bigg.reaction":[
"LIPOS2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ALATRS",
"name":"Alanyl-tRNA synthetase",
"metabolites":{
"ala__L_c":-1.0,
"alatrna_c":1.0,
"amp_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"trnaala_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04515",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"ALATRS"
]
},
"annotation":{
"bigg.reaction":[
"ALATRS"
],
"ec-code":[
"6.1.1.7"
],
"metanetx.reaction":[
"MNXR95701"
],
"reactome.reaction":[
"R-HSA-380177",
"R-HSA-379864"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11112"
]
}
},
{
"id":"TRNFE",
"name":"Transferrin: NAD+ oxidoreductase",
"metabolites":{
"fe2_c":2.0,
"fe3_c":-2.0,
"h_c":1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"TRNFE"
]
},
"annotation":{
"bigg.reaction":[
"TRNFE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"VALTRS",
"name":"Valyl-tRNA synthetase",
"metabolites":{
"amp_c":1.0,
"atp_c":-1.0,
"ppi_c":1.0,
"trnaval_c":-1.0,
"val__L_c":-1.0,
"valtrna_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03010",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"VALTRS"
]
},
"annotation":{
"bigg.reaction":[
"VALTRS"
],
"ec-code":[
"6.1.1.9"
],
"kegg.reaction":[
"R03665"
],
"metanetx.reaction":[
"MNXR105186"
],
"reactome.reaction":[
"R-HSA-380042",
"R-HSA-380199"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06449"
]
}
},
{
"id":"FMETTRS",
"name":"Methionyl-tRNA formyltransferase",
"metabolites":{
"10fthf_c":-1.0,
"fmettrna_c":1.0,
"h_c":1.0,
"mettrna_c":-1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10695",
"subsystem":"tRNA Charging",
"notes":{
"original_bigg_ids":[
"FMETTRS"
]
},
"annotation":{
"bigg.reaction":[
"FMETTRS"
],
"ec-code":[
"2.1.2.9"
],
"kegg.reaction":[
"R03940"
],
"metanetx.reaction":[
"MNXR99604"
],
"sbo":"SBO:0000176"
}
},
{
"id":"BACCL",
"name":"Biotin acetyl CoA carboxylase ligase",
"metabolites":{
"atp_c":-1.0,
"btamp_c":1.0,
"btn_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01760",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"BACCL"
]
},
"annotation":{
"bigg.reaction":[
"BACCL"
],
"ec-code":[
"6.3.4.10",
"6.2.1.11",
"6.3.4.15",
"6.3.4.11",
"6.3.4.9"
],
"metanetx.reaction":[
"MNXR138107"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00792"
]
}
},
{
"id":"BTNPL2",
"name":"Holocarboxylase synthestase (biotin protein ligase)",
"metabolites":{
"accp_c":-1.0,
"amp_c":1.0,
"btamp_c":-1.0,
"btnCCP_c":1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01760",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"BTNPL2"
]
},
"annotation":{
"bigg.reaction":[
"BTNPL2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"LIPAMPL_1",
"name":"Lipoyl-adenylate protein ligase",
"metabolites":{
"amp_c":1.0,
"lipamp_c":-1.0,
"lipopb_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07220",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"LIPAMPL"
]
},
"annotation":{
"bigg.reaction":[
"LIPAMPL_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"LIPOCT",
"name":"Lipoyl(octanoyl) transferase",
"metabolites":{
"ACP_c":1.0,
"h_c":-1.0,
"ocACP_c":-1.0,
"octapb_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02760 or SYNPCC7942_RS07705",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"LIPOCT"
]
},
"annotation":{
"bigg.reaction":[
"LIPOCT"
],
"metanetx.reaction":[
"MNXR101089"
],
"sbo":"SBO:0000176"
}
},
{
"id":"LIPATPT_1",
"name":"Lipoate-ATP adenylate transferase",
"metabolites":{
"atp_c":-1.0,
"h_c":-1.0,
"lipamp_c":1.0,
"lipoate_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07220",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"LIPATPT"
]
},
"annotation":{
"bigg.reaction":[
"LIPATPT_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ZXANHX",
"name":"Zeaxanthin hydroxylase (caloxanthin forming)",
"metabolites":{
"calxan_c":1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"o2_c":-1.0,
"zeax_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03485",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"ZXANHX"
]
},
"annotation":{
"bigg.reaction":[
"ZXANHX"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PHOA410um",
"name":"Photon absorption (400nm-420nm)",
"metabolites":{
"bcaro_exc_c":0.092,
"caro_c":-0.092,
"chla_soret_exc_c":0.9,
"cholphya_c":-0.9,
"photon410_e":-1.0,
"zeax_c":-0.008,
"zeax_exc_c":0.008
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA410um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA410um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA430um",
"name":"Photon absorption (420nm-440nm) ",
"metabolites":{
"bcaro_exc_c":0.138,
"caro_c":-0.138,
"chla_soret_exc_c":0.85,
"cholphya_c":-0.85,
"photon430_e":-1.0,
"zeax_c":-0.012,
"zeax_exc_c":0.012
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA430um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA430um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"CPH4S",
"name":"6-carboxy-5,6,7,8-tetrahydropterin synthase",
"metabolites":{
"acald_c":1.0,
"ahdt_c":-1.0,
"cph4_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09915",
"subsystem":"tRNA modification: queuosine",
"notes":{
"original_bigg_ids":[
"CPH4S"
]
},
"annotation":{
"bigg.reaction":[
"CPH4S"
],
"biocyc":[
"META:RXN0-5507"
],
"ec-code":[
"4.1.2.50"
],
"kegg.reaction":[
"R09959"
],
"metanetx.reaction":[
"MNXR95095"
],
"rhea":[
"27969",
"27968",
"27967",
"27966"
],
"sbo":"SBO:0000176"
}
},
{
"id":"OGMEACPR",
"name":"3-Oxo-glutaryl-[ACP] methyl ester reductase",
"metabolites":{
"h_c":-1.0,
"hgmeACP_c":1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"ogmeACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"OGMEACPR"
]
},
"annotation":{
"bigg.reaction":[
"OGMEACPR"
],
"metanetx.reaction":[
"MNXR102160"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CDGS",
"name":"7-deaza-7-carboxyguanine synthase",
"metabolites":{
"cdg_c":1.0,
"cph4_c":-1.0,
"h_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06810",
"subsystem":"tRNA modification: queuosine",
"notes":{
"original_bigg_ids":[
"CDGS"
]
},
"annotation":{
"bigg.reaction":[
"CDGS"
],
"biocyc":[
"META:RXN0-6575"
],
"ec-code":[
"4.3.99.3"
],
"kegg.reaction":[
"R10002"
],
"metanetx.reaction":[
"MNXR96522"
],
"rhea":[
"27974",
"27976",
"27977",
"27975"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PHOA450um",
"name":"Photon absorption (440nm-460nm) ",
"metabolites":{
"bcaro_exc_c":0.276,
"caro_c":-0.276,
"chla_soret_exc_c":0.7,
"cholphya_c":-0.7,
"photon450_e":-1.0,
"zeax_c":-0.024,
"zeax_exc_c":0.024
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA450um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA450um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA470um",
"name":"Photon absorption (460nm-480nm) ",
"metabolites":{
"bcaro_exc_c":0.92,
"caro_c":-0.92,
"photon470_e":-1.0,
"zeax_c":-0.08,
"zeax_exc_c":0.08
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA470um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA470um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA490um",
"name":"Photon absorption (480-500nm) ",
"metabolites":{
"bcaro_exc_c":0.92,
"caro_c":-0.92,
"photon490_e":-1.0,
"zeax_c":-0.08,
"zeax_exc_c":0.08
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA490um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA490um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"CCGS",
"name":"7-cyano-7-carbaguanine synthase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cdg_c":-1.0,
"h2o_c":1.0,
"h_c":1.0,
"nh4_c":-1.0,
"pi_c":1.0,
"preq0_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06815",
"subsystem":"tRNA modification: queuosine",
"notes":{
"original_bigg_ids":[
"CCGS"
]
},
"annotation":{
"bigg.reaction":[
"CCGS"
],
"biocyc":[
"META:RXN-12093"
],
"ec-code":[
"6.3.4.20"
],
"kegg.reaction":[
"R09978"
],
"metanetx.reaction":[
"MNXR96492"
],
"rhea":[
"27985",
"27984",
"27983",
"27982"
],
"sbo":"SBO:0000176"
}
},
{
"id":"CDGR",
"name":"7-cyano-7-deazaguanine reductase",
"metabolites":{
"h_c":-3.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"preq0_c":-1.0,
"preq1_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09355",
"subsystem":"tRNA modification: queuosine",
"notes":{
"original_bigg_ids":[
"CDGR"
]
},
"annotation":{
"bigg.reaction":[
"CDGR"
],
"biocyc":[
"META:RXN0-4022"
],
"ec-code":[
"1.7.1.13"
],
"kegg.reaction":[
"R07605"
],
"metanetx.reaction":[
"MNXR96521"
],
"rhea":[
"13410",
"13411",
"13412",
"13409"
],
"sabiork":[
"13537"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PHOA510um",
"name":"Photon absorption (500nm-520nm)",
"metabolites":{
"bcaro_exc_c":0.92,
"caro_c":-0.92,
"photon510_e":-1.0,
"zeax_c":-0.08,
"zeax_exc_c":0.08
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA510um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA510um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA530um",
"name":"Photon absorption (520nm-540nm) ",
"metabolites":{
"photon530_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA530um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA530um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PLYCOI",
"name":"7,9,7,9-tetracis-lycopene cis-trans-isomerase",
"metabolites":{
"lycop_c":1.0,
"ttclyco_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06385 or SYNPCC7942_RS08770 or SYNPCC7942_RS04985",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"PLYCOI"
]
},
"annotation":{
"bigg.reaction":[
"PLYCOI"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PHOA550um",
"name":"Photon absorption (540nm-560nm) ",
"metabolites":{
"photon550_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA550um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA550um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"SAMTRI",
"name":"S-adenosylmethionine:tRNA ribosyltransferase-isomerase",
"metabolites":{
"ade_c":1.0,
"amet_c":-1.0,
"epxqtrna_c":1.0,
"h_c":1.0,
"met__L_c":1.0,
"preqtrna_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11930",
"subsystem":"tRNA modification: queuosine",
"notes":{
"original_bigg_ids":[
"SAMTRI"
]
},
"annotation":{
"bigg.reaction":[
"SAMTRI"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EPXQR",
"name":"Epoxyqueuosine reductase",
"metabolites":{
"epxqtrna_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"quetrna_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02695",
"subsystem":"tRNA modification: queuosine",
"notes":{
"original_bigg_ids":[
"EPXQR"
]
},
"annotation":{
"bigg.reaction":[
"EPXQR"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UPPRT",
"name":"Uracil phosphoribosyltransferase",
"metabolites":{
"ppi_c":1.0,
"prpp_c":-1.0,
"ump_c":1.0,
"ura_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08725",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"UPPRT"
]
},
"annotation":{
"bigg.reaction":[
"UPPRT"
],
"biocyc":[
"META:URACIL-PRIBOSYLTRANS-RXN"
],
"ec-code":[
"2.4.2.9"
],
"kegg.reaction":[
"R00966"
],
"metanetx.reaction":[
"MNXR105142"
],
"rhea":[
"13018",
"13019",
"13020",
"13017"
],
"sabiork":[
"10227",
"86"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00711"
]
}
},
{
"id":"PHOA570um",
"name":"Photon absorption (560nm-580nm) ",
"metabolites":{
"photon570_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA570um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA570um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA590um",
"name":"Photon absorption (580-600nm) ",
"metabolites":{
"photon590_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA590um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA590um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA610um",
"name":"Photon absorption (600nm-620nm)",
"metabolites":{
"photon610_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA610um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA610um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"ZCARDS",
"name":"7,9,9-tricis-neurosporene:quinone oxidoreductase",
"metabolites":{
"dczcaro_c":-1.0,
"pq_um":-2.0,
"pqh2_um":2.0,
"ttclyco_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07730",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"ZCARDS"
]
},
"annotation":{
"bigg.reaction":[
"ZCARDS"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA630um",
"name":"Photon absorption (620nm-640nm) ",
"metabolites":{
"photon630_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA630um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA630um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA650um",
"name":"Photon absorption (640nm-660nm) ",
"metabolites":{
"photon650_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA650um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA650um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PHOA670um",
"name":"Photon absorption (660nm-680nm) ",
"metabolites":{
"photon670_e":-1.0,
"phycy_c":-1.0,
"phycy_exc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA670um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA670um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"UDPGD",
"name":"UDPglucose 6-dehydrogenase",
"metabolites":{
"h2o_c":-1.0,
"h_c":3.0,
"nad_c":-2.0,
"nadh_c":2.0,
"udpg_c":-1.0,
"udpglcur_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05000",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"UDPGD"
]
},
"annotation":{
"bigg.reaction":[
"UDPGD"
],
"biocyc":[
"META:UGD-RXN"
],
"ec-code":[
"1.1.1.22"
],
"kegg.reaction":[
"R00286"
],
"metanetx.reaction":[
"MNXR141783"
],
"reactome.reaction":[
"R-TGU-173597",
"R-SSC-173597",
"R-OSA-173597",
"R-RNO-173597",
"R-GGA-173597",
"R-MMU-173597",
"R-XTR-173597",
"R-DRE-173597",
"R-CEL-173597",
"R-CFA-173597",
"R-BTA-173597",
"R-DME-173597",
"R-ATH-173597",
"R-HSA-173597"
],
"rhea":[
"23598",
"23599",
"23597",
"23596"
],
"sabiork":[
"8582",
"784"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00211"
]
}
},
{
"id":"GMAND",
"name":"GDP-D-mannose dehydratase",
"metabolites":{
"gdpddman_c":1.0,
"gdpmann_c":-1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06860",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"GMAND"
]
},
"annotation":{
"bigg.reaction":[
"GMAND"
],
"biocyc":[
"META:GDPMANDEHYDRA-RXN"
],
"ec-code":[
"4.2.1.47"
],
"kegg.reaction":[
"R00888"
],
"metanetx.reaction":[
"MNXR100377"
],
"rhea":[
"23823",
"23822",
"23820",
"23821"
],
"sabiork":[
"588"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00642"
]
}
},
{
"id":"GFUCS",
"name":"GDP-L-fucose synthase",
"metabolites":{
"gdpddman_c":-1.0,
"gdpfuc_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08655",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"GFUCS"
]
},
"annotation":{
"bigg.reaction":[
"GFUCS"
],
"biocyc":[
"META:1.1.1.271-RXN"
],
"ec-code":[
"1.1.1.271"
],
"kegg.reaction":[
"R05692"
],
"metanetx.reaction":[
"MNXR100108"
],
"rhea":[
"18888",
"18885",
"18886",
"18887"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03962"
]
}
},
{
"id":"PHOA690um",
"name":"Photon absorption (680-700nm) ",
"metabolites":{
"chla_qy1_exc_c":0.9,
"chla_qy2_exc_c":0.1,
"cholphya_c":-1.0,
"photon690_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PHOA690um"
]
},
"annotation":{
"bigg.reaction":[
"PHOA690um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"NADDP",
"name":"NAD diphosphatase",
"metabolites":{
"amp_c":1.0,
"h2o_c":-1.0,
"h_c":2.0,
"nad_c":-1.0,
"nmn_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01040",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NADDP"
]
},
"annotation":{
"bigg.reaction":[
"NADDP"
],
"biocyc":[
"META:NADPYROPHOSPHAT-RXN"
],
"ec-code":[
"3.6.1.22",
"3.6.1.9"
],
"kegg.reaction":[
"R00103"
],
"metanetx.reaction":[
"MNXR101861"
],
"rhea":[
"11802",
"11800",
"11801",
"11803"
],
"sabiork":[
"684"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00076",
"rxn05823"
]
}
},
{
"id":"DM_pho_loss_c",
"name":"Photon energy loss (heat/fluorescence)",
"metabolites":{
"pho_loss_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_pho_loss_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_pho_loss_c"
],
"sbo":"SBO:0000628"
}
},
{
"id":"ETCHLAS",
"name":"Energy transfer (ChlA Soret to ChlA Qy)",
"metabolites":{
"chla_qy1_exc_c":0.315,
"chla_qy2_exc_c":0.035,
"chla_soret_exc_c":-1.0,
"cholphya_c":0.65,
"pho_loss_c":0.65
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"ETCHLAS"
]
},
"annotation":{
"bigg.reaction":[
"ETCHLAS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ETBCARO",
"name":"Energy transfer (Beta carotene to ChlA Qy)",
"metabolites":{
"bcaro_exc_c":-1.0,
"caro_c":1.0,
"chla_qy1_exc_c":0.75,
"cholphya_c":-0.75,
"pho_loss_c":0.25
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"ETBCARO"
]
},
"annotation":{
"bigg.reaction":[
"ETBCARO"
],
"sbo":"SBO:0000176"
}
},
{
"id":"COLIPAabcex",
"name":"O-antigen LPS transport (extracellular)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"colipacy_e":1.0,
"colipacy_p":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"COLIPAabcex"
]
},
"annotation":{
"bigg.reaction":[
"COLIPAabcex"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MLDCP1App",
"name":"Murein L,D-carboxypeptidase (murein5px4p) (periplasm)",
"metabolites":{
"alaala_p":1.0,
"h2o_p":-1.0,
"murein3px4p_p":1.0,
"murein5px4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLDCP1App"
]
},
"annotation":{
"bigg.reaction":[
"MLDCP1App"
],
"ec-code":[
"3.4.17.13"
],
"metanetx.reaction":[
"MNXR143237"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08926"
]
}
},
{
"id":"CDPGLC46DH",
"name":"CDP glucose 4 6 dehydratase",
"metabolites":{
"cdp4dh6doglc_c":1.0,
"cdpglc_c":-1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00305",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"CDPGLC46DH"
]
},
"annotation":{
"bigg.reaction":[
"CDPGLC46DH"
],
"biocyc":[
"META:CDP-GLUCOSE-46-DEHYDRATASE-RXN"
],
"ec-code":[
"4.2.1.45"
],
"kegg.reaction":[
"R02426"
],
"metanetx.reaction":[
"MNXR96556"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01750"
]
}
},
{
"id":"AACPS6",
"name":"Acyl-[acyl-carrier-protein] synthetase  (n-C18:0)",
"metabolites":{
"ACP_c":-1.0,
"amp_c":1.0,
"atp_c":-1.0,
"ocdcaACP_c":1.0,
"ocdca_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04725",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"AACPS6"
]
},
"annotation":{
"bigg.reaction":[
"AACPS6"
],
"ec-code":[
"6.2.1.20"
],
"metanetx.reaction":[
"MNXR95145"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ALDR18",
"name":"Aldehyde reductase octadecanal NADP",
"metabolites":{
"ACP_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"ocdcaACP_c":-1.0,
"ocdcal_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08140",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ALDR18"
]
},
"annotation":{
"bigg.reaction":[
"ALDR18"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ALDDC17",
"name":"Aldehyde decarbonylase- C17 forming",
"metabolites":{
"for_c":1.0,
"h2o_c":1.0,
"h_c":-1.0,
"hpdcn_c":1.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"o2_c":-1.0,
"ocdcal_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08135",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ALDDC17"
]
},
"annotation":{
"bigg.reaction":[
"ALDDC17"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ALCD19",
"name":"Alcohol dehydrogenase (glycerol)",
"metabolites":{
"glyald_c":-1.0,
"glyc_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11615 or SYNPCC7942_RS08430",
"subsystem":"Glycolysis/Gluconeogenesis",
"notes":{
"original_bigg_ids":[
"ALCD19"
]
},
"annotation":{
"bigg.reaction":[
"ALCD19"
],
"ec-code":[
"1.1.1.72",
"1.1.1.21"
],
"kegg.reaction":[
"R01036"
],
"metanetx.reaction":[
"MNXR95709"
],
"rhea":[
"30029",
"30027",
"30028",
"30030"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00763"
]
}
},
{
"id":"THZT",
"name":"Thiazole tautomerase (TenI)",
"metabolites":{
"2c4mthzep_c":-1.0,
"cthzp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05420",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"THZT"
]
},
"annotation":{
"bigg.reaction":[
"THZT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MLDCP1Bpp",
"name":"Murein L,D-carboxypeptidase (murein4p4p) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"h2o_p":-1.0,
"murein4p3p_p":1.0,
"murein4p4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLDCP1Bpp"
]
},
"annotation":{
"bigg.reaction":[
"MLDCP1Bpp"
],
"ec-code":[
"3.4.17.13"
],
"metanetx.reaction":[
"MNXR143238"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08927"
]
}
},
{
"id":"PHYPQOX",
"name":"15-cis-phytoene:plastoquinone oxidoreductase",
"metabolites":{
"phyto_c":-1.0,
"pq_um":-2.0,
"pqh2_um":2.0,
"tczcaro_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10055",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"PHYPQOX"
]
},
"annotation":{
"bigg.reaction":[
"PHYPQOX"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MLDCP2App",
"name":"Murein L,D-carboxypeptidase (murein5p5p) (periplasm)",
"metabolites":{
"alaala_p":1.0,
"h2o_p":-1.0,
"murein5p3p_p":1.0,
"murein5p5p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLDCP2App"
]
},
"annotation":{
"bigg.reaction":[
"MLDCP2App"
],
"ec-code":[
"3.4.17.13"
],
"metanetx.reaction":[
"MNXR143239"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08928"
]
}
},
{
"id":"MLDCP2Bpp",
"name":"Murein L,D-carboxypeptidase (murein4p3p) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"h2o_p":-1.0,
"murein3p3p_p":1.0,
"murein4p3p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLDCP2Bpp"
]
},
"annotation":{
"bigg.reaction":[
"MLDCP2Bpp"
],
"ec-code":[
"3.4.17.13"
],
"metanetx.reaction":[
"MNXR143240"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08929"
]
}
},
{
"id":"LALGP",
"name":"L-alanyl-gamma-L-glutamate peptidase",
"metabolites":{
"LalaLglu_c":-1.0,
"ala__L_c":1.0,
"glu__L_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"Synpcc7942_1971",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"LALGP"
]
},
"annotation":{
"bigg.reaction":[
"LALGP"
],
"biocyc":[
"META:RXN0-6981"
],
"ec-code":[
"3.4.13.18"
],
"metanetx.reaction":[
"MNXR101011"
],
"rhea":[
"29336",
"29337",
"29335",
"29338"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08775"
]
}
},
{
"id":"AGM4Pt2pp",
"name":"GlcNAc-anhMurNAc tetrapeptide transport in via proton symport (periplasm)",
"metabolites":{
"anhgm4p_c":1.0,
"anhgm4p_p":-1.0,
"h_c":1.0,
"h_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"AGM4Pt2pp"
]
},
"annotation":{
"bigg.reaction":[
"AGM4Pt2pp"
],
"metanetx.reaction":[
"MNXR95549"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08079"
]
}
},
{
"id":"AGMt2pp",
"name":"GlcNAc-anhMurNAc transport in via proton symport (periplasm)",
"metabolites":{
"anhgm_c":1.0,
"anhgm_p":-1.0,
"h_c":1.0,
"h_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGMt2pp"
]
},
"annotation":{
"bigg.reaction":[
"AGMt2pp"
],
"metanetx.reaction":[
"MNXR95555"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08081"
]
}
},
{
"id":"CXANHX",
"name":"Caloxanthin hydroxylase (nostoxanthin forming)",
"metabolites":{
"calxan_c":-1.0,
"h2o_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"nstxan_c":1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03485",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"CXANHX"
]
},
"annotation":{
"bigg.reaction":[
"CXANHX"
],
"sbo":"SBO:0000176"
}
},
{
"id":"OGMEACPS",
"name":"3-Oxo-glutaryl-[ACP] methyl ester synthase",
"metabolites":{
"co2_c":1.0,
"coa_c":1.0,
"h_c":-1.0,
"malACP_c":-1.0,
"malcoame_c":-1.0,
"ogmeACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"OGMEACPS"
]
},
"annotation":{
"bigg.reaction":[
"OGMEACPS"
],
"metanetx.reaction":[
"MNXR102161"
],
"sbo":"SBO:0000176"
}
},
{
"id":"A5PISO",
"name":"Arabinose-5-phosphate isomerase",
"metabolites":{
"ara5p_c":1.0,
"ru5p__D_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11645",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"A5PISO"
]
},
"annotation":{
"bigg.reaction":[
"A5PISO"
],
"biocyc":[
"META:DARAB5PISOM-RXN"
],
"ec-code":[
"5.3.1.13"
],
"kegg.reaction":[
"R01530"
],
"metanetx.reaction":[
"MNXR95132"
],
"rhea":[
"23105",
"23107",
"23104",
"23106"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01117"
]
}
},
{
"id":"KDOPS",
"name":"3-deoxy -D-manno-octulosonic -acid 8-phosphate synthase",
"metabolites":{
"ara5p_c":-1.0,
"h2o_c":-1.0,
"kdo8p_c":1.0,
"pep_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11635",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"KDOPS"
]
},
"annotation":{
"bigg.reaction":[
"KDOPS"
],
"ec-code":[
"2.5.1.55"
],
"kegg.reaction":[
"R03254"
],
"metanetx.reaction":[
"MNXR141202"
],
"rhea":[
"14054",
"14053",
"14055",
"14056"
],
"sabiork":[
"3075"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02331"
]
}
},
{
"id":"KDOPP",
"name":"3-deoxy-manno-octulosonate-8-phosphatase",
"metabolites":{
"h2o_c":-1.0,
"kdo8p_c":-1.0,
"kdo_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11630",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"KDOPP"
]
},
"annotation":{
"bigg.reaction":[
"KDOPP"
],
"biocyc":[
"META:KDO-8PPHOSPHAT-RXN"
],
"ec-code":[
"3.1.3.45"
],
"metanetx.reaction":[
"MNXR141191"
],
"rhea":[
"11501",
"11503",
"11502",
"11500"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EX_meoh_e",
"name":"Methanol exchange",
"metabolites":{
"meoh_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_meoh_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_meoh_e"
],
"biocyc":[
"META:TRANS-RXN0-459"
],
"metanetx.reaction":[
"MNXR101464"
],
"rhea":[
"34873",
"34872",
"34874",
"34871"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn10570"
]
}
},
{
"id":"NO2tex",
"name":"Nitrite transport via diffusion (extracellular to periplasm)",
"metabolites":{
"no2_e":-1.0,
"no2_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"NO2tex"
]
},
"annotation":{
"bigg.reaction":[
"NO2tex"
],
"biocyc":[
"META:TRANS-RXN-137"
],
"metanetx.reaction":[
"MNXR101912"
],
"rhea":[
"28983",
"28986",
"28984",
"28985"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10823",
"rxn08999"
]
}
},
{
"id":"KDOCT2",
"name":"3-deoxy-manno-octulosonate cytidylyltransferase",
"metabolites":{
"ckdo_c":1.0,
"ctp_c":-1.0,
"kdo_c":-1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11640",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"KDOCT2"
]
},
"annotation":{
"bigg.reaction":[
"KDOCT2"
],
"biocyc":[
"META:CPM-KDOSYNTH-RXN"
],
"ec-code":[
"2.7.7.38"
],
"metanetx.reaction":[
"MNXR100932"
],
"rhea":[
"23449",
"23448",
"23451",
"23450"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EGMEACPR",
"name":"Enoylglutaryl-[ACP] methyl ester reductase",
"metabolites":{
"egmeACP_c":-1.0,
"gmeACP_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"EGMEACPR"
]
},
"annotation":{
"bigg.reaction":[
"EGMEACPR"
],
"ec-code":[
"1.3.1.10"
],
"kegg.reaction":[
"R10118"
],
"metanetx.reaction":[
"MNXR97906"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DXYTST",
"name":"1-deoxy-D-xylulose 5-phosphate:thiol sulfurtransferase (ThiG)",
"metabolites":{
"2c4mthzep_c":1.0,
"dxyl5p_c":-1.0,
"h2o_c":2.0,
"h_c":1.0,
"imgly_c":-1.0,
"this_c":1.0,
"thissh_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02935",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"DXYTST"
]
},
"annotation":{
"bigg.reaction":[
"DXYTST"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UAG2E",
"name":"UDP-N-acetylglucosamine 2-epimerase",
"metabolites":{
"uacgam_c":-1.0,
"uacmam_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02810",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"UAG2E"
]
},
"annotation":{
"bigg.reaction":[
"UAG2E"
],
"biocyc":[
"META:UDPGLCNACEPIM-RXN"
],
"ec-code":[
"5.1.3.14"
],
"kegg.reaction":[
"R00420"
],
"metanetx.reaction":[
"MNXR141025"
],
"rhea":[
"17214",
"17215",
"17213",
"17216"
],
"sabiork":[
"875"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00297"
]
}
},
{
"id":"OANTS",
"name":"O-antigen synthesis (Synechococcus elongatus 7942)",
"metabolites":{
"gdp_c":2.2481,
"gdpmann_c":-2.2481,
"h_c":2.6255,
"oanticy_c":1.0,
"udp_c":0.3774,
"udpg_c":-0.0999,
"udpgal_c":-0.2775
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01430 and SYNPCC7942_RS09640 and SYNPCC7942_RS09645 and SYNPCC7942_RS09650 and SYNPCC7942_RS09570",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"OANTS"
]
},
"annotation":{
"bigg.reaction":[
"OANTS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACGAMT",
"name":"UDP-N-acetylglucosamine:undecaprenylphosphate N-acetylglucosamine -1-phosphate transferase",
"metabolites":{
"uacgam_c":-1.0,
"udcpp_c":-1.0,
"ump_c":1.0,
"unaga_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01430",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"ACGAMT"
]
},
"annotation":{
"bigg.reaction":[
"ACGAMT"
],
"metanetx.reaction":[
"MNXR95251"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08040"
]
}
},
{
"id":"Htabcpp",
"name":"Proton (H+) P-type ATPase (uptake, periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":2.0,
"h_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"Htabcpp"
]
},
"annotation":{
"bigg.reaction":[
"Htabcpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"ETAPCPSII",
"name":"Energy transfer (Allophycocyanin to PSII ChlA Qy)",
"metabolites":{
"allocy_c":1.0,
"allocy_exc_c":-1.0,
"chla_qy2_exc_c":0.95,
"cholphya_c":-0.95,
"pho_loss_c":0.05
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"ETAPCPSII"
]
},
"annotation":{
"bigg.reaction":[
"ETAPCPSII"
],
"sbo":"SBO:0000176"
}
},
{
"id":"STCHLPSIum",
"name":"State transition energy transfer (PSII ChlA Qy to PSI ChlA Qy)",
"metabolites":{
"chla_qy1_exc_c":0.9,
"chla_qy2_exc_c":-1.0,
"cholphya_c":0.1,
"pho_loss_c":0.1
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"STCHLPSIum"
]
},
"annotation":{
"bigg.reaction":[
"STCHLPSIum"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DEXZEAX",
"name":"Pigment de-excitation (xanthophylls)",
"metabolites":{
"pho_loss_c":1.0,
"zeax_c":1.0,
"zeax_exc_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"DEXZEAX"
]
},
"annotation":{
"bigg.reaction":[
"DEXZEAX"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PFOR",
"name":"Pyruvate flavodoxin oxidoreductase",
"metabolites":{
"accoa_c":1.0,
"co2_c":1.0,
"coa_c":-1.0,
"fldox_c":-1.0,
"fldrd_c":1.0,
"h_c":-1.0,
"pyr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12115",
"subsystem":"Pyruvate metabolism/TCA Reactions",
"notes":{
"original_bigg_ids":[
"PFOR"
]
},
"annotation":{
"bigg.reaction":[
"PFOR"
],
"biocyc":[
"META:PYFLAVOXRE-RXN"
],
"ec-code":[
"1.2.7.-",
"1.2.7.1"
],
"kegg.reaction":[
"R10866"
],
"metanetx.reaction":[
"MNXR102515"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACMAMT",
"name":"UDP-N-acetyl-D-mannosamine transferase",
"metabolites":{
"h_c":1.0,
"uacmam_c":-1.0,
"udp_c":1.0,
"unaga_c":-1.0,
"unagam_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08420",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"ACMAMT"
]
},
"annotation":{
"bigg.reaction":[
"ACMAMT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ICLIPAabcpp",
"name":"Inner core lipid A transport (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"icolipacy_c":-1.0,
"icolipacy_p":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00405",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"ICLIPAabcpp"
]
},
"annotation":{
"bigg.reaction":[
"ICLIPAabcpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"ICLIPAS",
"name":"Inner core lipid A biosynthesis",
"metabolites":{
"gdp_c":0.3128,
"gdpfuc_c":-0.3128,
"icolipacy_c":1.0,
"kdolipid4cy_c":-0.0865,
"udcpdp_c":0.0558,
"unagam_c":-0.0558
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11885 and SYNPCC7942_RS09555 and SYNPCC7942_RS10275 and SYNPCC7942_RS10280 and SYNPCC7942_RS10285 and SYNPCC7942_RS10290",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"ICLIPAS"
]
},
"annotation":{
"bigg.reaction":[
"ICLIPAS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MOAT_1",
"name":"3-deoxy-D-manno-octulosonic acid transferase",
"metabolites":{
"ckdo_c":-1.0,
"cmp_c":1.0,
"kdolipid4cy_c":1.0,
"lipidAds2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11620 and SYNPCC7942_RS11625",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"MOAT"
]
},
"annotation":{
"bigg.reaction":[
"MOAT_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MPTG",
"name":"Murein polymerizing transglycosylase",
"metabolites":{
"h_c":2.0,
"murein5p5p_p":1.0,
"uaagmda_c":-2.0,
"udcpdp_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10355 and SYNPCC7942_RS10140",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MPTG"
]
},
"annotation":{
"bigg.reaction":[
"MPTG"
],
"metanetx.reaction":[
"MNXR143249"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MPTG2",
"name":"Murein polymerizing transglycosylase 2 (three linked units)",
"metabolites":{
"h_c":1.0,
"murein5p5p5p_p":1.0,
"murein5p5p_p":-1.0,
"uaagmda_c":-1.0,
"udcpdp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10355 and SYNPCC7942_RS10140",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MPTG2"
]
},
"annotation":{
"bigg.reaction":[
"MPTG2"
],
"metanetx.reaction":[
"MNXR143250"
],
"sbo":"SBO:0000185"
}
},
{
"id":"UAGPT3",
"name":"UDP-N-acetylglucosamine-N-acetylmuramyl-(pentapeptide)pyrophosphoryl-undecaprenol N-acetylglucosamine transferase",
"metabolites":{
"h_c":1.0,
"uaagmda_c":1.0,
"uacgam_c":-1.0,
"uagmda_c":-1.0,
"udp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11755",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UAGPT3"
]
},
"annotation":{
"bigg.reaction":[
"UAGPT3"
],
"biocyc":[
"META:NACGLCTRANS-RXN"
],
"ec-code":[
"2.4.1.227"
],
"kegg.reaction":[
"R05032",
"R06174"
],
"metanetx.reaction":[
"MNXR139325"
],
"rhea":[
"31228",
"31227",
"31229",
"31230"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03408"
]
}
},
{
"id":"GLYCOX1",
"name":"Glycine oxidase (ThiO)",
"metabolites":{
"gly_c":-1.0,
"h2o2_c":1.0,
"imgly_c":1.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12230",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"GLYCOX1"
]
},
"annotation":{
"bigg.reaction":[
"GLYCOX1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UM4PL",
"name":"UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate-D-alanine ligase",
"metabolites":{
"LalaDgluMdapDala_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"uamr_c":-1.0,
"um4p_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08860",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UM4PL"
]
},
"annotation":{
"bigg.reaction":[
"UM4PL"
],
"metanetx.reaction":[
"MNXR143441"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn09360"
]
}
},
{
"id":"UM3PL",
"name":"UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase",
"metabolites":{
"LalaDgluMdap_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"uamr_c":-1.0,
"ugmd_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08860",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UM3PL"
]
},
"annotation":{
"bigg.reaction":[
"UM3PL"
],
"metanetx.reaction":[
"MNXR143440"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PAPPT3",
"name":"Phospho-N-acetylmuramoyl-pentapeptide-transferase (meso-2,6-diaminopimelate)",
"metabolites":{
"uagmda_c":1.0,
"udcpp_c":-1.0,
"ugmda_c":-1.0,
"ump_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00770",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"PAPPT3"
]
},
"annotation":{
"bigg.reaction":[
"PAPPT3"
],
"ec-code":[
"2.7.8.13"
],
"metanetx.reaction":[
"MNXR102373"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn03904"
]
}
},
{
"id":"OANTIabcpp",
"name":"O-antigen transport (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"oanticy_c":-1.0,
"oanticy_p":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06375 and SYNPCC7942_RS05765",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"OANTIabcpp"
]
},
"annotation":{
"bigg.reaction":[
"OANTIabcpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"OANTILpp",
"name":"O-antigen ligation (periplasm)",
"metabolites":{
"colipacy_p":1.0,
"h2o_p":1.0,
"icolipacy_p":-1.0,
"oanticy_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06375 and SYNPCC7942_RS05765",
"subsystem":"Lipopolysaccharide/O-antigen Biosynthesis",
"notes":{
"original_bigg_ids":[
"OANTILpp"
]
},
"annotation":{
"bigg.reaction":[
"OANTILpp"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MDDCP1pp",
"name":"Murein D,D-carboxypeptidase (murein5px4p) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"h2o_p":-1.0,
"murein4px4p_p":1.0,
"murein5px4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08520 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDCP1pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDCP1pp"
],
"ec-code":[
"3.4.16.4"
],
"metanetx.reaction":[
"MNXR143206"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08890"
]
}
},
{
"id":"MDDCP2pp",
"name":"Murein D,D-carboxypeptidase (murein5px4px4p) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"h2o_p":-1.0,
"murein4px4px4p_p":1.0,
"murein5px4px4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08520 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDCP2pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDCP2pp"
],
"ec-code":[
"3.4.16.4"
],
"metanetx.reaction":[
"MNXR143207"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08891"
]
}
},
{
"id":"STACPSI",
"name":"State transition energy transfer (Allophycocyanin to PSI ChlA Qy)",
"metabolites":{
"allocy_c":1.0,
"allocy_exc_c":-1.0,
"chla_qy1_exc_c":0.9,
"cholphya_c":-0.9,
"pho_loss_c":0.1
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01220",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"STACPSI"
]
},
"annotation":{
"bigg.reaction":[
"STACPSI"
],
"sbo":"SBO:0000176"
}
},
{
"id":"UDCPDP",
"name":"Undecaprenyl-diphosphatase",
"metabolites":{
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"udcpdp_c":-1.0,
"udcpp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09980",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UDCPDP"
]
},
"annotation":{
"bigg.reaction":[
"UDCPDP"
],
"metanetx.reaction":[
"MNXR105042"
],
"rhea":[
"17069",
"17070",
"17072",
"17071"
],
"sabiork":[
"5225"
],
"sbo":"SBO:0000176"
}
},
{
"id":"MLTGY1pp",
"name":"Murein lytic transglycosylase (murein4p4p) (periplasm)",
"metabolites":{
"anhgm4p_p":2.0,
"murein4p4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02000",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLTGY1pp"
]
},
"annotation":{
"bigg.reaction":[
"MLTGY1pp"
],
"metanetx.reaction":[
"MNXR143245"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08937"
]
}
},
{
"id":"ETCPC",
"name":"Energy transfer (Phycocyanin to allophycocyanin)",
"metabolites":{
"allocy_c":-1.0,
"allocy_exc_c":1.0,
"phycy_c":1.0,
"phycy_exc_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01655 and SYNPCC7942_RS01660 and SYNPCC7942_RS01665 and SYNPCC7942_RS01670 and SYNPCC7942_RS05370 and SYNPCC7942_RS05375 and SYNPCC7942_RS05395 and SYNPCC7942_RS05400 and SYNPCC7942_RS05410 and SYNPCC7942_RS05380 and SYNPCC7942_RS05385 and SYNPCC7942_RS10300 and SYNPCC7942_RS05390",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"ETCPC"
]
},
"annotation":{
"bigg.reaction":[
"ETCPC"
],
"sbo":"SBO:0000176"
}
},
{
"id":"GLYCOX2",
"name":"Glycine oxidase",
"metabolites":{
"glx_c":1.0,
"h2o_c":-1.0,
"imgly_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12230",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"GLYCOX2"
]
},
"annotation":{
"bigg.reaction":[
"GLYCOX2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NO2tabcpp",
"name":"Nitrite ABC ATPase (uptake, periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"no2_c":1.0,
"no2_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10670 and SYNPCC7942_RS10675 and Synpcc7942_2107",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"NO2tabcpp"
]
},
"annotation":{
"bigg.reaction":[
"NO2tabcpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MLTGY2pp",
"name":"Murein lytic transglycosylase (murein4p3p) (periplasm)",
"metabolites":{
"anhgm3p_p":1.0,
"anhgm4p_p":1.0,
"murein4p3p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02000",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLTGY2pp"
]
},
"annotation":{
"bigg.reaction":[
"MLTGY2pp"
],
"metanetx.reaction":[
"MNXR143246"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08938"
]
}
},
{
"id":"MLTGY3pp",
"name":"Murein lytic transglycosylase (murein3p3p) (periplasm)",
"metabolites":{
"anhgm3p_p":2.0,
"murein3p3p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02000",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLTGY3pp"
]
},
"annotation":{
"bigg.reaction":[
"MLTGY3pp"
],
"metanetx.reaction":[
"MNXR143247"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08939"
]
}
},
{
"id":"MLTGY4pp",
"name":"Murein lytic transglycosylase (murein4px4p4p) (periplasm)",
"metabolites":{
"anhgm4p_p":1.0,
"murein4px4p4p_p":-1.0,
"murein4px4p_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02000",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MLTGY4pp"
]
},
"annotation":{
"bigg.reaction":[
"MLTGY4pp"
],
"metanetx.reaction":[
"MNXR143248"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08940"
]
}
},
{
"id":"AGM4PA",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide amidase",
"metabolites":{
"LalaDgluMdapDala_c":1.0,
"anhgm4p_c":-1.0,
"anhgm_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11990",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGM4PA"
]
},
"annotation":{
"bigg.reaction":[
"AGM4PA"
],
"metanetx.reaction":[
"MNXR95546"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08076"
]
}
},
{
"id":"FALGTHLs",
"name":"Formaldehyde glutathione ligase (spontaneous)",
"metabolites":{
"fald_c":-1.0,
"gthrd_c":-1.0,
"hmgth_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"FALGTHLs"
]
},
"annotation":{
"bigg.reaction":[
"FALGTHLs"
],
"biocyc":[
"META:RXN-2961"
],
"ec-code":[
"4.4.1.22"
],
"kegg.reaction":[
"R06982"
],
"metanetx.reaction":[
"MNXR99239"
],
"rhea":[
"22488",
"22490",
"22491",
"22489"
],
"sabiork":[
"7488"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08463",
"rxn04791"
]
}
},
{
"id":"CLtex",
"name":"Chloride (Cl-1) transport via diffusion (extracellular to periplasm)",
"metabolites":{
"cl_e":-1.0,
"cl_p":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"Cltex"
]
},
"annotation":{
"bigg.reaction":[
"CLtex"
],
"biocyc":[
"META:TRANS-RXN-139"
],
"metanetx.reaction":[
"MNXR96797"
],
"reactome.reaction":[
"R-TGU-975340",
"R-OSA-2684901",
"R-RNO-2744228",
"R-DDI-2744228",
"R-HSA-2744228",
"R-SSC-975449",
"R-CFA-2744242",
"R-CFA-975449",
"R-GGA-975389",
"R-TGU-975449",
"R-HSA-2684901",
"R-DRE-2744349",
"R-RNO-975449",
"R-GGA-427570",
"R-XTR-2684901",
"R-SSC-2744349",
"R-BTA-2684901",
"R-HSA-427570",
"R-TGU-975389",
"R-BTA-2744349",
"R-DME-2684901",
"R-SSC-2684901",
"R-SSC-975389",
"R-BTA-975389",
"R-MMU-975389",
"R-TGU-2744242",
"R-DME-2744242",
"R-CEL-975340",
"R-PFA-427570",
"R-GGA-975449",
"R-XTR-427570",
"R-CFA-975389",
"R-DRE-975449",
"R-SSC-427570",
"R-XTR-2744349",
"R-CEL-427570",
"R-DME-2744349",
"R-HSA-2744242",
"R-GGA-2744228",
"R-SSC-975340",
"R-BTA-2744228",
"R-CEL-975389",
"R-HSA-975340",
"R-DME-975389",
"R-DRE-2684901",
"R-RNO-2744242",
"R-MMU-975449",
"R-CFA-427570",
"R-DME-427570",
"R-HSA-975449",
"R-SSC-2744242",
"R-DRE-2744228",
"R-DRE-2744242",
"R-RNO-975340",
"R-GGA-2744242",
"R-RNO-2744361",
"R-MMU-2744361",
"R-BTA-975340",
"R-SCE-427570",
"R-OSA-427570",
"R-GGA-975340",
"R-RNO-427570",
"R-XTR-975340",
"R-MMU-2684901",
"R-CFA-2744361",
"R-CFA-975340",
"R-MMU-2744242",
"R-RNO-2744349",
"R-TGU-2744228",
"R-DME-2744228",
"R-DRE-2744361",
"R-BTA-427570",
"R-SSC-2744228",
"R-SSC-2744361",
"R-DDI-427570",
"R-CEL-2684901",
"R-MMU-2744349",
"R-CFA-2744228",
"R-MMU-975340",
"R-XTR-2744228",
"R-XTR-2744361",
"R-BTA-975449",
"R-SPO-2684901",
"R-ATH-427570",
"R-TGU-427570",
"R-BTA-2744242",
"R-CFA-2744349",
"R-GGA-2684901",
"R-DDI-2684901",
"R-CFA-2684901",
"R-DRE-975389",
"R-MMU-2744228",
"R-RNO-975389",
"R-HSA-2744349",
"R-BTA-2744361",
"R-GGA-2744361",
"R-RNO-2684901",
"R-XTR-975449",
"R-TGU-2684901",
"R-CEL-2744228",
"R-DRE-975340",
"R-XTR-975389",
"R-DME-2744361",
"R-HSA-975389",
"R-MMU-427570",
"R-HSA-2744361",
"R-CEL-2744361",
"R-TGU-2744361",
"R-XTR-2744242",
"R-DME-975340",
"R-SCE-2744228",
"R-ATH-2684901"
],
"rhea":[
"29823",
"29824",
"29826",
"29825"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn10473",
"rxn08234"
]
}
},
{
"id":"EX_cl_e",
"name":"Chloride exchange",
"metabolites":{
"cl_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Extracellular exchange",
"notes":{
"original_bigg_ids":[
"EX_cl_e"
]
},
"annotation":{
"bigg.reaction":[
"EX_cl_e"
],
"biocyc":[
"META:TRANS-RXN-139"
],
"metanetx.reaction":[
"MNXR96797"
],
"reactome.reaction":[
"R-TGU-975340",
"R-OSA-2684901",
"R-RNO-2744228",
"R-DDI-2744228",
"R-HSA-2744228",
"R-SSC-975449",
"R-CFA-2744242",
"R-CFA-975449",
"R-GGA-975389",
"R-TGU-975449",
"R-HSA-2684901",
"R-DRE-2744349",
"R-RNO-975449",
"R-GGA-427570",
"R-XTR-2684901",
"R-SSC-2744349",
"R-BTA-2684901",
"R-HSA-427570",
"R-TGU-975389",
"R-BTA-2744349",
"R-DME-2684901",
"R-SSC-2684901",
"R-SSC-975389",
"R-BTA-975389",
"R-MMU-975389",
"R-TGU-2744242",
"R-DME-2744242",
"R-CEL-975340",
"R-PFA-427570",
"R-GGA-975449",
"R-XTR-427570",
"R-CFA-975389",
"R-DRE-975449",
"R-SSC-427570",
"R-XTR-2744349",
"R-CEL-427570",
"R-DME-2744349",
"R-HSA-2744242",
"R-GGA-2744228",
"R-SSC-975340",
"R-BTA-2744228",
"R-CEL-975389",
"R-HSA-975340",
"R-DME-975389",
"R-DRE-2684901",
"R-RNO-2744242",
"R-MMU-975449",
"R-CFA-427570",
"R-DME-427570",
"R-HSA-975449",
"R-SSC-2744242",
"R-DRE-2744228",
"R-DRE-2744242",
"R-RNO-975340",
"R-GGA-2744242",
"R-RNO-2744361",
"R-MMU-2744361",
"R-BTA-975340",
"R-SCE-427570",
"R-OSA-427570",
"R-GGA-975340",
"R-RNO-427570",
"R-XTR-975340",
"R-MMU-2684901",
"R-CFA-2744361",
"R-CFA-975340",
"R-MMU-2744242",
"R-RNO-2744349",
"R-TGU-2744228",
"R-DME-2744228",
"R-DRE-2744361",
"R-BTA-427570",
"R-SSC-2744228",
"R-SSC-2744361",
"R-DDI-427570",
"R-CEL-2684901",
"R-MMU-2744349",
"R-CFA-2744228",
"R-MMU-975340",
"R-XTR-2744228",
"R-XTR-2744361",
"R-BTA-975449",
"R-SPO-2684901",
"R-ATH-427570",
"R-TGU-427570",
"R-BTA-2744242",
"R-CFA-2744349",
"R-GGA-2684901",
"R-DDI-2684901",
"R-CFA-2684901",
"R-DRE-975389",
"R-MMU-2744228",
"R-RNO-975389",
"R-HSA-2744349",
"R-BTA-2744361",
"R-GGA-2744361",
"R-RNO-2684901",
"R-XTR-975449",
"R-TGU-2684901",
"R-CEL-2744228",
"R-DRE-975340",
"R-XTR-975389",
"R-DME-2744361",
"R-HSA-975389",
"R-MMU-427570",
"R-HSA-2744361",
"R-CEL-2744361",
"R-TGU-2744361",
"R-XTR-2744242",
"R-DME-975340",
"R-SCE-2744228",
"R-ATH-2684901"
],
"rhea":[
"29823",
"29824",
"29826",
"29825"
],
"sbo":"SBO:0000627",
"seed.reaction":[
"rxn10473",
"rxn08234"
]
}
},
{
"id":"AM3PA",
"name":"Anhydrous-N-Acetylmuramyl-tripeptide amidase",
"metabolites":{
"LalaDgluMdap_c":1.0,
"anhm3p_c":-1.0,
"anhm_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11990",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AM3PA"
]
},
"annotation":{
"bigg.reaction":[
"AM3PA"
],
"metanetx.reaction":[
"MNXR95792"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08123"
]
}
},
{
"id":"AM4PA",
"name":"Anhydrous-N-Acetylmuramyl-tetrapeptide amidase",
"metabolites":{
"LalaDgluMdapDala_c":1.0,
"anhm4p_c":-1.0,
"anhm_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11990",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AM4PA"
]
},
"annotation":{
"bigg.reaction":[
"AM4PA"
],
"metanetx.reaction":[
"MNXR95793"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08124"
]
}
},
{
"id":"SK_fum_c",
"name":"EX fum e",
"metabolites":{
"fum_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_fum_c"
]
},
"annotation":{
"bigg.reaction":[
"SK_fum_c"
],
"biocyc":[
"META:TRANS-RXN0-553"
],
"metanetx.reaction":[
"MNXR99715"
],
"sbo":"SBO:0000632",
"seed.reaction":[
"rxn08544",
"rxn11013"
]
}
},
{
"id":"MALCOAMT",
"name":"Malonyl-CoA methyltransferase",
"metabolites":{
"ahcys_c":1.0,
"amet_c":-1.0,
"malcoa_c":-1.0,
"malcoame_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00150",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"MALCOAMT"
]
},
"annotation":{
"bigg.reaction":[
"MALCOAMT"
],
"metanetx.reaction":[
"MNXR101337"
],
"rhea":[
"34900",
"34899",
"34902",
"34901"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DM_succ_c",
"name":"Modeling: demand reaction (succ c)",
"metabolites":{
"succ_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_succ_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_succ_c"
],
"biocyc":[
"META:TRANS-RXN0-552"
],
"metanetx.reaction":[
"MNXR104619"
],
"sbo":"SBO:0000628",
"seed.reaction":[
"rxn10952",
"rxn09271"
]
}
},
{
"id":"AGM3PApp",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide amidase (periplasm)",
"metabolites":{
"LalaDgluMdap_p":1.0,
"anhgm3p_p":-1.0,
"anhgm_p":1.0,
"h2o_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10825",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGM3PApp"
]
},
"annotation":{
"bigg.reaction":[
"AGM3PApp"
],
"metanetx.reaction":[
"MNXR95543"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08073"
]
}
},
{
"id":"AGM4PApp",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide amidase (periplasm)",
"metabolites":{
"LalaDgluMdapDala_p":1.0,
"anhgm4p_p":-1.0,
"anhgm_p":1.0,
"h2o_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10825",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGM4PApp"
]
},
"annotation":{
"bigg.reaction":[
"AGM4PApp"
],
"metanetx.reaction":[
"MNXR95546"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08076"
]
}
},
{
"id":"UM4PCP",
"name":"UDP-N-acetylmuramoyl-L-alanyl-D-gamma-glutamyl-meso-2,6-diaminopimelate-D-alanine L,D-carboxypeptidase",
"metabolites":{
"ala__D_c":1.0,
"h2o_c":-1.0,
"ugmd_c":1.0,
"um4p_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09960",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"UM4PCP"
]
},
"annotation":{
"bigg.reaction":[
"UM4PCP"
],
"metanetx.reaction":[
"MNXR105116"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SK_akg_c",
"name":"Sink akg(c)",
"metabolites":{
"akg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_akg_c"
]
},
"annotation":{
"bigg.reaction":[
"SK_akg_c"
],
"metanetx.reaction":[
"MNXR95663"
],
"sabiork":[
"13794"
],
"sbo":"SBO:0000632",
"seed.reaction":[
"rxn10923",
"rxn08096",
"rxn13220"
]
}
},
{
"id":"MDRPD",
"name":"5-Methylthio-5-deoxy-D-ribulose 1-phosphate dehydratase",
"metabolites":{
"5mdru1p_c":-1.0,
"dkmpp_c":1.0,
"h2o_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10105",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"MDRPD"
]
},
"annotation":{
"bigg.reaction":[
"MDRPD"
],
"biocyc":[
"META:R145-RXN"
],
"ec-code":[
"4.2.1.109"
],
"kegg.reaction":[
"R07392"
],
"metanetx.reaction":[
"MNXR125830"
],
"reactome.reaction":[
"R-HSA-1237140",
"R-SCE-1237121"
],
"rhea":[
"15550",
"15549",
"15551",
"15552"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05104"
]
}
},
{
"id":"NGAM_D1um",
"name":"Non-growth associated maintenance: PSII D1 protein repair",
"metabolites":{
"adp_c":360.0,
"atp_c":-360.0,
"gdp_c":720.0,
"gtp_c":-720.0,
"h2o_c":-1080.0,
"h_c":1080.0,
"pi_c":1080.0,
"ps2d1_exc_um":-1.0,
"ps2d1_um":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NGAM_D1um"
]
},
"annotation":{
"bigg.reaction":[
"NGAM_D1um"
],
"sbo":"SBO:0000185"
}
},
{
"id":"PSICRum",
"name":"Photosystem I charge recombination",
"metabolites":{
"o2_c":-1.0,
"o2s_c":1.0,
"p700_exc_um":-1.0,
"p700_um":1.0,
"pcox_u":1.0,
"pcrd_u":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PSICRum"
]
},
"annotation":{
"bigg.reaction":[
"PSICRum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"AM4PCP",
"name":"Anhydrous-N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase",
"metabolites":{
"ala__D_c":1.0,
"anhm3p_c":1.0,
"anhm4p_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09960",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AM4PCP"
]
},
"annotation":{
"bigg.reaction":[
"AM4PCP"
],
"metanetx.reaction":[
"MNXR95794"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08125"
]
}
},
{
"id":"4PCP",
"name":"Tetrapeptide L,D-carboxypeptidase",
"metabolites":{
"LalaDgluMdapDala_c":-1.0,
"LalaDgluMdap_c":1.0,
"ala__D_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09960",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"4PCP"
]
},
"annotation":{
"bigg.reaction":[
"4PCP"
],
"metanetx.reaction":[
"MNXR95049"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08007"
]
}
},
{
"id":"AGM4PCP",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide L,D-carboxypeptidase",
"metabolites":{
"ala__D_c":1.0,
"anhgm3p_c":1.0,
"anhgm4p_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09960",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGM4PCP"
]
},
"annotation":{
"bigg.reaction":[
"AGM4PCP"
],
"metanetx.reaction":[
"MNXR95547"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08077"
]
}
},
{
"id":"AGMH",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl beta -1,4-N-acetylglucosaminidase",
"metabolites":{
"acgam_c":1.0,
"anhgm_c":-1.0,
"anhm_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01800",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGMH"
]
},
"annotation":{
"bigg.reaction":[
"AGMH"
],
"metanetx.reaction":[
"MNXR95550"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08080"
]
}
},
{
"id":"PSIICRum",
"name":"Photosystem II charge recombination",
"metabolites":{
"p680_exc_um":-1.0,
"p680_um":1.0,
"ps2d1_exc_um":0.01,
"ps2d1_um":-0.01
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PSIICRum"
]
},
"annotation":{
"bigg.reaction":[
"PSIICRum"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DM_ac_c",
"name":"Modeling: demand reaction (ac c)",
"metabolites":{
"ac_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_ac_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_ac_c"
],
"sbo":"SBO:0000628"
}
},
{
"id":"AGM3PH",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tripeptide beta -1,4-N-acetylglucosaminidase",
"metabolites":{
"acgam_c":1.0,
"anhgm3p_c":-1.0,
"anhm3p_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01800",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGM3PH"
]
},
"annotation":{
"bigg.reaction":[
"AGM3PH"
],
"metanetx.reaction":[
"MNXR95544"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08074"
]
}
},
{
"id":"DM_lac__D_c",
"name":"Modeling: demand reaction (lac  D c)",
"metabolites":{
"lac__D_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Intracellular demand",
"notes":{
"original_bigg_ids":[
"DM_lac__D_c"
]
},
"annotation":{
"bigg.reaction":[
"DM_lac__D_c"
],
"sbo":"SBO:0000628"
}
},
{
"id":"ENOPH",
"name":"Enolase-phosphatase E1",
"metabolites":{
"dhmtp_c":1.0,
"dkmpp_c":-1.0,
"h2o_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10110",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"ENOPH"
]
},
"annotation":{
"bigg.reaction":[
"ENOPH"
],
"biocyc":[
"META:3.1.3.77-RXN"
],
"ec-code":[
"3.1.3.77"
],
"kegg.reaction":[
"R07395"
],
"metanetx.reaction":[
"MNXR126089"
],
"reactome.reaction":[
"R-RNO-1237129",
"R-SCE-1237129",
"R-DDI-1237129",
"R-CFA-1237129",
"R-XTR-1237129",
"R-DRE-1237129",
"R-SPO-1237129",
"R-ATH-1237129",
"R-TGU-1237129",
"R-GGA-1237129",
"R-OSA-1237129",
"R-MMU-1237129",
"R-HSA-1237129",
"R-DME-1237129",
"R-BTA-1237129",
"R-SSC-1237129",
"R-CEL-1237129"
],
"rhea":[
"21702",
"21700",
"21701",
"21703"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05107"
]
}
},
{
"id":"NGAM",
"name":"Modeling: Non-growth associated maintenance",
"metabolites":{
"h2o_c":2.0,
"o2_c":-1.0,
"pq_um":2.0,
"pqh2_um":-2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Biomass and maintenance functions",
"notes":{
"original_bigg_ids":[
"NGAM"
]
},
"annotation":{
"bigg.reaction":[
"NGAM"
],
"sbo":"SBO:0000185"
}
},
{
"id":"QULNS",
"name":"Quinolinate synthase",
"metabolites":{
"dhap_c":-1.0,
"h2o_c":2.0,
"iasp_c":-1.0,
"pi_c":1.0,
"quln_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07410",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"QULNS"
]
},
"annotation":{
"bigg.reaction":[
"QULNS"
],
"biocyc":[
"META:QUINOLINATE-SYNTHA-RXN"
],
"ec-code":[
"2.5.1.72"
],
"kegg.reaction":[
"R04292"
],
"metanetx.reaction":[
"MNXR103400"
],
"rhea":[
"25889",
"25891",
"25890",
"25888"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02988"
]
}
},
{
"id":"AGM4PH",
"name":"N-Acetyl-D-glucosamine(anhydrous)N-Acetylmuramyl-tetrapeptide beta -1,4-N-acetylglucosaminidase",
"metabolites":{
"acgam_c":1.0,
"anhgm4p_c":-1.0,
"anhm4p_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01800",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"AGM4PH"
]
},
"annotation":{
"bigg.reaction":[
"AGM4PH"
],
"metanetx.reaction":[
"MNXR95548"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08078"
]
}
},
{
"id":"LADGMDH",
"name":"L-alanyl-gamma-D-glutamyl-meso-diaminopimelate hydrolase",
"metabolites":{
"26dap__M_c":1.0,
"LalaDgluMdap_c":-1.0,
"LalaDglu_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08075",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"LADGMDH"
]
},
"annotation":{
"bigg.reaction":[
"LADGMDH"
],
"metanetx.reaction":[
"MNXR101002"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08773"
]
}
},
{
"id":"ILETA",
"name":"Isoleucine transaminase",
"metabolites":{
"3mop_c":1.0,
"akg_c":-1.0,
"glu__L_c":1.0,
"ile__L_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05285",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"ILETA"
]
},
"annotation":{
"bigg.reaction":[
"ILETA"
],
"biocyc":[
"META:BRANCHED-CHAINAMINOTRANSFERILEU-RXN"
],
"ec-code":[
"2.6.1.42"
],
"kegg.reaction":[
"R02199"
],
"metanetx.reaction":[
"MNXR96228"
],
"rhea":[
"24803",
"24802",
"24804",
"24801"
],
"sabiork":[
"9086"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01575"
]
}
},
{
"id":"ALAGLUE",
"name":"L-alanyl-gamma-glutamate epimerase",
"metabolites":{
"LalaDglu_c":-1.0,
"LalaLglu_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12060",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"ALAGLUE"
]
},
"annotation":{
"bigg.reaction":[
"ALAGLUE"
],
"biocyc":[
"META:RXN0-5228"
],
"ec-code":[
"5.1.1.20"
],
"kegg.reaction":[
"R10938"
],
"metanetx.reaction":[
"MNXR95690"
],
"rhea":[
"28394",
"28395",
"28396",
"28397"
],
"sabiork":[
"7810"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08100"
]
}
},
{
"id":"CELLSYN",
"name":"Cellulose synthase",
"metabolites":{
"b14glucan_c":1.0,
"glc__D_c":-1.0,
"h2o_c":1.0,
"h_c":1.0,
"udp_c":1.0,
"udpg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07155 and SYNPCC7942_RS02375 and SYNPCC7942_RS10930",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"CELLSYN"
]
},
"annotation":{
"bigg.reaction":[
"CELLSYN"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ALAALAabcpp",
"name":"D-alanyl-D-alanine (DalaDala) transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"alaala_c":1.0,
"alaala_p":-1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11355 and SYNPCC7942_RS04250 and SYNPCC7942_RS05995 and SYNPCC7942_RS02275 and SYNPCC7942_RS04245 and SYNPCC7942_RS06675",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"ALAALAabcpp"
]
},
"annotation":{
"bigg.reaction":[
"ALAALAabcpp"
],
"metanetx.reaction":[
"MNXR95677"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08098"
]
}
},
{
"id":"LEUTA",
"name":"Leucine transaminase",
"metabolites":{
"4mop_c":1.0,
"akg_c":-1.0,
"glu__L_c":1.0,
"leu__L_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05285",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"LEUTA"
]
},
"annotation":{
"bigg.reaction":[
"LEUTA"
],
"biocyc":[
"META:BRANCHED-CHAINAMINOTRANSFERLEU-RXN"
],
"ec-code":[
"2.6.1.42",
"2.6.1.6",
"2.6.1.67"
],
"kegg.reaction":[
"R01090"
],
"metanetx.reaction":[
"MNXR96229"
],
"rhea":[
"18323",
"18324",
"18321",
"18322"
],
"sabiork":[
"1352"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00806"
]
}
},
{
"id":"ARD",
"name":"1;2-dihydroxy-3-keto-5-methylthiopentene dioxygenase",
"metabolites":{
"2kmb_c":1.0,
"dhmtp_c":-1.0,
"for_c":1.0,
"h_c":2.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03120",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"ARD"
]
},
"annotation":{
"bigg.reaction":[
"ARD"
],
"biocyc":[
"META:R147-RXN"
],
"ec-code":[
"1.13.11.54"
],
"kegg.reaction":[
"R07364"
],
"metanetx.reaction":[
"MNXR95227"
],
"reactome.reaction":[
"R-BTA-1237119",
"R-SSC-1237119",
"R-TGU-1237119",
"R-SPO-1237119",
"R-ATH-1237119",
"R-OSA-1237119",
"R-GGA-1237119",
"R-DRE-1237119",
"R-CFA-1237119",
"R-XTR-1237119",
"R-MMU-1237119",
"R-SCE-1237119",
"R-HSA-1237119",
"R-CEL-1237119",
"R-DDI-1237119",
"R-RNO-1237119",
"R-DME-1237119"
],
"rhea":[
"24507",
"24505",
"24506",
"24504"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05092"
]
}
},
{
"id":"VALTA",
"name":"Valine transaminase",
"metabolites":{
"3mob_c":1.0,
"akg_c":-1.0,
"glu__L_c":1.0,
"val__L_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05285",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"VALTA"
]
},
"annotation":{
"bigg.reaction":[
"VALTA"
],
"biocyc":[
"META:BRANCHED-CHAINAMINOTRANSFERVAL-RXN"
],
"ec-code":[
"2.6.1.42",
"2.6.1.6"
],
"kegg.reaction":[
"R01214"
],
"metanetx.reaction":[
"MNXR96230"
],
"rhea":[
"24813",
"24816",
"24814",
"24815"
],
"sabiork":[
"1446"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00903"
]
}
},
{
"id":"NDPK3",
"name":"Nucleoside-diphosphate kinase (ATP:CDP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cdp_c":-1.0,
"ctp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK3"
]
},
"annotation":{
"bigg.reaction":[
"NDPK3"
],
"biocyc":[
"META:CDPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R00570"
],
"metanetx.reaction":[
"MNXR101936"
],
"rhea":[
"25240",
"25239",
"25237",
"25238"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00409"
]
}
},
{
"id":"NDPK6",
"name":"Nucleoside-diphosphate kinase (ATP:dUDP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dudp_c":-1.0,
"dutp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK6"
]
},
"annotation":{
"bigg.reaction":[
"NDPK6"
],
"biocyc":[
"META:DUDPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R02331"
],
"metanetx.reaction":[
"MNXR101938"
],
"rhea":[
"28584",
"28583",
"28582",
"28585"
],
"sabiork":[
"421"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01678"
]
}
},
{
"id":"NDPK1",
"name":"Nucleoside-diphosphate kinase (ATP:GDP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"gdp_c":-1.0,
"gtp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK1"
]
},
"annotation":{
"bigg.reaction":[
"NDPK1"
],
"biocyc":[
"META:GDPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R00330"
],
"metanetx.reaction":[
"MNXR96119"
],
"rhea":[
"27689",
"27686",
"27688",
"27687"
],
"sabiork":[
"138"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00237"
]
}
},
{
"id":"4PEPTabcpp",
"name":"Tetrapeptide (LalaDgluMdapDala) transport via ABC system (periplasm)",
"metabolites":{
"LalaDgluMdapDala_c":1.0,
"LalaDgluMdapDala_p":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11355 and SYNPCC7942_RS04250 and SYNPCC7942_RS05995 and SYNPCC7942_RS02275 and SYNPCC7942_RS04245 and SYNPCC7942_RS06675",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"4PEPTabcpp"
]
},
"annotation":{
"bigg.reaction":[
"4PEPTabcpp"
],
"metanetx.reaction":[
"MNXR95050"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08008"
]
}
},
{
"id":"ALAALAD",
"name":"D-alanine-D-alanine dipeptidase",
"metabolites":{
"ala__D_c":2.0,
"alaala_c":-1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02205",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"ALAALAD"
]
},
"annotation":{
"bigg.reaction":[
"ALAALAD"
],
"biocyc":[
"META:3.4.13.22-RXN"
],
"ec-code":[
"3.4.13.22"
],
"kegg.reaction":[
"R07651"
],
"metanetx.reaction":[
"MNXR95675"
],
"rhea":[
"20662",
"20664",
"20663",
"20661"
],
"sabiork":[
"7268"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07466"
]
}
},
{
"id":"ADPGLC",
"name":"ADPglucose diphosphatase",
"metabolites":{
"adpglc_c":-1.0,
"amp_c":1.0,
"g1p_c":1.0,
"h2o_c":-1.0,
"h_c":2.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11540",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"ADPGDP"
]
},
"annotation":{
"bigg.reaction":[
"ADPGLC"
],
"biocyc":[
"META:RXN-10770"
],
"ec-code":[
"3.6.1.21",
"3.6.1.13",
"3.6.1.9"
],
"kegg.reaction":[
"R00951"
],
"metanetx.reaction":[
"MNXR95478"
],
"sabiork":[
"1264",
"8816"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00697"
]
}
},
{
"id":"NDPK8",
"name":"Nucleoside-diphosphate kinase (ATP:dADP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dadp_c":-1.0,
"datp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK8"
]
},
"annotation":{
"bigg.reaction":[
"NDPK8"
],
"biocyc":[
"META:DADPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R01137"
],
"metanetx.reaction":[
"MNXR101940"
],
"rhea":[
"27675",
"27674",
"27677",
"27676"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00839"
]
}
},
{
"id":"UNK3",
"name":"2-keto-4-methylthiobutyrate transamination",
"metabolites":{
"2kmb_c":-1.0,
"akg_c":1.0,
"glu__L_c":-1.0,
"met__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09115",
"subsystem":"Amino acid metabolism: Cysteine and Methionine metabolism",
"notes":{
"original_bigg_ids":[
"UNK3"
]
},
"annotation":{
"bigg.reaction":[
"UNK3"
],
"biocyc":[
"META:RXN-14147"
],
"ec-code":[
"2.6.1.57",
"2.6.1.5"
],
"kegg.reaction":[
"R07396"
],
"metanetx.reaction":[
"MNXR95923"
],
"rhea":[
"25799",
"25797",
"25796",
"25798"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05108"
]
}
},
{
"id":"NDPK5",
"name":"Nucleoside-diphosphate kinase (ATP:dGDP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dgdp_c":-1.0,
"dgtp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK5"
]
},
"annotation":{
"bigg.reaction":[
"NDPK5"
],
"biocyc":[
"META:DGDPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R01857"
],
"metanetx.reaction":[
"MNXR96118"
],
"rhea":[
"27692",
"27690",
"27691",
"27693"
],
"sabiork":[
"183"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01353"
]
}
},
{
"id":"DALAabcpp",
"name":"D-alanine transport via ABC peptide transporter",
"metabolites":{
"adp_c":1.0,
"ala__D_c":1.0,
"ala__D_p":-1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11355 and SYNPCC7942_RS04250 and SYNPCC7942_RS05995 and SYNPCC7942_RS02275 and SYNPCC7942_RS04245 and SYNPCC7942_RS06675",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"3PEPTabcpp",
"DALAabcpp"
]
},
"annotation":{
"bigg.reaction":[
"DALAabcpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"NDPK4",
"name":"Nucleoside-diphosphate kinase (ATP:dTDP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"dtdp_c":-1.0,
"dttp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK4"
]
},
"annotation":{
"bigg.reaction":[
"NDPK4"
],
"biocyc":[
"META:DTDPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R02093"
],
"metanetx.reaction":[
"MNXR101937"
],
"rhea":[
"27682",
"27684",
"27683",
"27685"
],
"sabiork":[
"423"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01512"
]
}
},
{
"id":"ZISO",
"name":"9,15,9-tricis-zeta-carotene cis-trans-isomerase",
"metabolites":{
"dczcaro_c":1.0,
"tczcaro_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10035",
"subsystem":"Carotenoid biosynthesis",
"notes":{
"original_bigg_ids":[
"ZISO"
]
},
"annotation":{
"bigg.reaction":[
"ZISO"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NDPK2",
"name":"Nucleoside-diphosphate kinase (ATP:UDP)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"udp_c":-1.0,
"utp_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12670",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"NDPK2"
]
},
"annotation":{
"bigg.reaction":[
"NDPK2"
],
"biocyc":[
"META:UDPKIN-RXN"
],
"ec-code":[
"2.7.4.6"
],
"kegg.reaction":[
"R00156"
],
"metanetx.reaction":[
"MNXR101935"
],
"rhea":[
"25101",
"25098",
"25100",
"25099"
],
"sabiork":[
"199"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00117"
]
}
},
{
"id":"3OAR180",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C18:0)",
"metabolites":{
"3hoctaACP_c":1.0,
"3ooctdACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR180"
]
},
"annotation":{
"bigg.reaction":[
"3OAR180"
],
"ec-code":[
"1.1.1.100"
],
"metanetx.reaction":[
"MNXR94948"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn07992"
]
}
},
{
"id":"3OAR140",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C14:0)",
"metabolites":{
"3hmrsACP_c":1.0,
"3omrsACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR140"
]
},
"annotation":{
"bigg.reaction":[
"3OAR140"
],
"biocyc":[
"META:RXN-9536"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04566"
],
"metanetx.reaction":[
"MNXR94944"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05342"
]
}
},
{
"id":"PAPA160",
"name":"Phosphatidate phosphatase (n-C16:0)",
"metabolites":{
"12dgr160_c":1.0,
"h2o_c":-1.0,
"pa160_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04020",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"PAPA160"
]
},
"annotation":{
"bigg.reaction":[
"PAPA160"
],
"ec-code":[
"3.1.3.4"
],
"metanetx.reaction":[
"MNXR102350"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PHEOASE",
"name":"Pheophytin pheophorbide hydrolase",
"metabolites":{
"h2o_c":-1.0,
"h_c":1.0,
"phphbda_c":1.0,
"phptna_c":-1.0,
"phytol_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12855",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PHEOASE"
]
},
"annotation":{
"bigg.reaction":[
"PHEOASE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PAPA_HDE_PALM",
"name":"Phosphatidate phosphatase(16:1(9Z)/16:0)",
"metabolites":{
"12dgr1619Z160_c":1.0,
"h2o_c":-1.0,
"pa1619Z160_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04020",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"PAPA_HDE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"PAPA_HDE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PAPA161",
"name":"Phosphatidate phosphatase (n-C16:1)",
"metabolites":{
"12dgr161_c":1.0,
"h2o_c":-1.0,
"pa161_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04020",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"PAPA161"
]
},
"annotation":{
"bigg.reaction":[
"PAPA161"
],
"metanetx.reaction":[
"MNXR102353"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PAPA_OLE_HDE",
"name":"Phosphatidate phosphatase(18:1(9Z)/16:1(9Z))",
"metabolites":{
"12dgr1819Z1619Z_c":1.0,
"h2o_c":-1.0,
"pa1819Z1619Z_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04020",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"PAPA_OLE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"PAPA_OLE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACGK",
"name":"Acetylglutamate kinase",
"metabolites":{
"acg5p_c":1.0,
"acglu_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07645",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"ACGK"
]
},
"annotation":{
"bigg.reaction":[
"ACGK"
],
"biocyc":[
"META:ACETYLGLUTKIN-RXN"
],
"ec-code":[
"2.7.2.8"
],
"kegg.reaction":[
"R02649"
],
"metanetx.reaction":[
"MNXR95256"
],
"rhea":[
"14632",
"14631",
"14630",
"14629"
],
"sabiork":[
"2545"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01917"
]
}
},
{
"id":"MCTP2App",
"name":"Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)",
"metabolites":{
"ala__D_p":2.0,
"murein5p5p5p_p":-1.0,
"murein5px4px4p_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02455 or SYNPCC7942_RS02950",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MCTP2App"
]
},
"annotation":{
"bigg.reaction":[
"MCTP2App"
],
"metanetx.reaction":[
"MNXR143205"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08889"
]
}
},
{
"id":"MCTP1App",
"name":"Murein crosslinking transpeptidase 1A:(A2pm->D-ala) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"murein5p5p_p":-1.0,
"murein5px4p_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02455 or SYNPCC7942_RS02950",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MCTP1App"
]
},
"annotation":{
"bigg.reaction":[
"MCTP1App"
],
"metanetx.reaction":[
"MNXR101426"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08887"
]
}
},
{
"id":"MCTP1Bpp",
"name":"Murein crosslinking transpeptidase 1B:(A2pm->A2pm) (periplasm)",
"metabolites":{
"alaala_p":1.0,
"murein5p5p_p":-1.0,
"murein5px3p_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02455 or SYNPCC7942_RS02950",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MCTP1Bpp"
]
},
"annotation":{
"bigg.reaction":[
"MCTP1Bpp"
],
"metanetx.reaction":[
"MNXR143204"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08888"
]
}
},
{
"id":"LEUabcpp",
"name":"L-leucine transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"leu__L_c":1.0,
"leu__L_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04215 and SYNPCC7942_RS09440 and SYNPCC7942_RS09600 and SYNPCC7942_RS09605 and SYNPCC7942_RS11065",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"LEUabcpp"
]
},
"annotation":{
"bigg.reaction":[
"LEUabcpp"
],
"biocyc":[
"META:ABC-35-RXN"
],
"metanetx.reaction":[
"MNXR101054"
],
"rhea":[
"29810#1",
"29808#1",
"29809#1",
"29807#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05161",
"rxn08784"
]
}
},
{
"id":"ACLSa",
"name":"Acetolactate synthase (step 1)",
"metabolites":{
"2ahethmpp_c":1.0,
"co2_c":1.0,
"h_c":-1.0,
"pyr_c":-1.0,
"thmpp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00705 and SYNPCC7942_RS12365",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"ACLSa"
]
},
"annotation":{
"bigg.reaction":[
"ACLSa"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SULabcpp",
"name":"Sulfate transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0,
"so4_c":1.0,
"so4_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(SYNPCC7942_RS08560 and SYNPCC7942_RS08565 and SYNPCC7942_RS08570 and SYNPCC7942_RS08765) or (SYNPCC7942_RS08585 and SYNPCC7942_RS08590 and SYNPCC7942_RS08595 and SYNPCC7942_RS08600)",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"SULabcpp"
]
},
"annotation":{
"bigg.reaction":[
"SULabcpp"
],
"biocyc":[
"META:3.6.3.25-RXN",
"META:ABC-70-RXN"
],
"ec-code":[
"3.6.3.25"
],
"metanetx.reaction":[
"MNXR104655"
],
"rhea":[
"10192#1",
"10193#1",
"10194#1",
"10195#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09276",
"rxn05153"
]
}
},
{
"id":"PAPA_OLE_PALM",
"name":"Phosphatidate phosphatase(18:1(9Z)/16:0)",
"metabolites":{
"12dgr1819Z160_c":1.0,
"h2o_c":-1.0,
"pa1819Z160_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04020",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"PAPA_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"PAPA_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"TYRTA",
"name":"Tyrosine transaminase",
"metabolites":{
"34hpp_c":1.0,
"akg_c":-1.0,
"glu__L_c":1.0,
"tyr__L_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12930",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"TYRTA"
]
},
"annotation":{
"bigg.reaction":[
"TYRTA"
],
"biocyc":[
"META:TYROSINE-AMINOTRANSFERASE-RXN"
],
"ec-code":[
"2.6.1.57",
"2.6.1.5",
"2.6.1.9",
"2.6.1.1"
],
"kegg.reaction":[
"R00734"
],
"metanetx.reaction":[
"MNXR105000"
],
"reactome.reaction":[
"R-BTA-517444",
"R-ATH-517444",
"R-DRE-71155",
"R-MMU-517444",
"R-TGU-517444",
"R-CEL-517444",
"R-DRE-517444",
"R-BTA-71155",
"R-HSA-517444",
"R-CFA-71155",
"R-OSA-71155",
"R-XTR-71155",
"R-SSC-71155",
"R-SCE-71155",
"R-SCE-517444",
"R-XTR-517444",
"R-HSA-71155",
"R-DME-517444",
"R-RNO-517444",
"R-ATH-71155",
"R-GGA-517444",
"R-MMU-71155",
"R-DDI-517444",
"R-CFA-517444",
"R-OSA-517444",
"R-SSC-517444",
"R-DME-71155",
"R-GGA-71155",
"R-TGU-71155",
"R-CEL-71155",
"R-DDI-71155",
"R-RNO-71155"
],
"rhea":[
"15094",
"15096",
"15093",
"15095"
],
"sabiork":[
"1097"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00527"
]
}
},
{
"id":"ACLSb",
"name":"Acetolactate synthase (step 2)",
"metabolites":{
"2ahethmpp_c":-1.0,
"alac__S_c":1.0,
"pyr_c":-1.0,
"thmpp_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00705 and SYNPCC7942_RS12365",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"ACLSb"
]
},
"annotation":{
"bigg.reaction":[
"ACLSb"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PHEOX_1",
"name":"Pheophorbide a oxygenase",
"metabolites":{
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h_c":-2.0,
"o2_c":-1.0,
"phphbda_c":-1.0,
"rcc_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11000",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PHEOX"
]
},
"annotation":{
"bigg.reaction":[
"PHEOX_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"OPMEACPS",
"name":"3-Oxo-pimeloyl-[ACP] methyl ester synthase",
"metabolites":{
"ACP_c":1.0,
"co2_c":1.0,
"gmeACP_c":-1.0,
"h_c":-1.0,
"malACP_c":-1.0,
"opmeACP_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02730",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"OPMEACPS"
]
},
"annotation":{
"bigg.reaction":[
"OPMEACPS"
],
"metanetx.reaction":[
"MNXR102208"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EAR100y",
"name":"Enoyl-[acyl-carrier-protein] reductase (NADPH) (n-C10:0)",
"metabolites":{
"dcaACP_c":1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"tdec2eACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00640",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"EAR100y"
]
},
"annotation":{
"bigg.reaction":[
"EAR100y"
],
"ec-code":[
"2.3.1.86"
],
"metanetx.reaction":[
"MNXR97846"
],
"sbo":"SBO:0000176"
}
},
{
"id":"EHGLAT",
"name":"L erythro 4 Hydroxyglutamate2 oxoglutarate aminotransferase",
"metabolites":{
"4h2oglt_c":1.0,
"akg_c":-1.0,
"e4hglu_c":-1.0,
"glu__L_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12930",
"subsystem":"Amino acid metabolism: Proline and Arginine metabolism",
"notes":{
"original_bigg_ids":[
"EHGLAT"
]
},
"annotation":{
"bigg.reaction":[
"EHGLAT"
],
"biocyc":[
"META:4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN"
],
"ec-code":[
"2.6.1.23"
],
"metanetx.reaction":[
"MNXR97908"
],
"sbo":"SBO:0000176"
}
},
{
"id":"KAS15",
"name":"Beta-ketoacyl-ACP synthase (2)",
"metabolites":{
"accoa_c":-1.0,
"actACP_c":1.0,
"co2_c":1.0,
"coa_c":1.0,
"h_c":-1.0,
"malACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07445",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"KAS15"
]
},
"annotation":{
"bigg.reaction":[
"KAS15"
],
"biocyc":[
"META:2.3.1.180-RXN"
],
"ec-code":[
"2.3.1.180"
],
"kegg.reaction":[
"R10707"
],
"metanetx.reaction":[
"MNXR100913"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08766"
]
}
},
{
"id":"FALDH2",
"name":"Formaldehyde dehydrogenase",
"metabolites":{
"Sfglutth_c":1.0,
"h_c":1.0,
"hmgth_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02340",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"FALDH2"
]
},
"annotation":{
"bigg.reaction":[
"FALDH2"
],
"biocyc":[
"META:RXN0-276"
],
"ec-code":[
"1.1.1.284",
"1.1.1"
],
"kegg.reaction":[
"R06983"
],
"metanetx.reaction":[
"MNXR99237"
],
"reactome.reaction":[
"R-ATH-5692237",
"R-XTR-5692237",
"R-SSC-5692237",
"R-HSA-5692237",
"R-SCE-5692237",
"R-CFA-5692237",
"R-CEL-5692237",
"R-SPO-5692237",
"R-RNO-5692237",
"R-GGA-5692237",
"R-BTA-5692237",
"R-OSA-5692237",
"R-DDI-5692237",
"R-TGU-5692237",
"R-MMU-5692237",
"R-DME-5692237",
"R-DRE-5692237"
],
"rhea":[
"19985",
"19987",
"19986",
"19988"
],
"sabiork":[
"7489"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08460",
"rxn04792"
]
}
},
{
"id":"PHYTK",
"name":"Phytol kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"cdp_c":1.0,
"ctp_c":-1.0,
"h_c":1.0,
"phdp_c":1.0,
"phytol_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05350",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PHYTK"
]
},
"annotation":{
"bigg.reaction":[
"PHYTK"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NDH_1_4_um_copy2",
"name":"NAD(P)H dehydrogenase, carbon dioxide coupled (plastoquinone-8 & 4 protons)( Thylakoid)",
"metabolites":{
"co2_c":-1.0,
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h2o_c":-1.0,
"h_c":-4.0,
"h_u":3.0,
"hco3_c":1.0,
"pq_um":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS06865 and SYNPCC7942_RS07240 and SYNPCC7942_RS06045 and SYNPCC7942_RS06880 and SYNPCC7942_RS06875 and SYNPCC7942_RS08870 and SYNPCC7942_RS06870 and SYNPCC7942_RS06055 and SYNPCC7942_RS06050 and Synpcc7942_0413 and SYNPCC7942_RS11345 and SYNPCC7942_RS10050 and SYNPCC7942_RS12620 and SYNPCC7942_RS13830 and SYNPCC7942_RS09675 and SYNPCC7942_RS05670 and SYNPCC7942_RS03125 and SYNPCC7942_RS01575 and SYNPCC7942_RS01570",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NDH-1(3)um",
"NDH-1(4)um"
]
},
"annotation":{
"bigg.reaction":[
"NDH_1_4_um"
],
"sbo":"SBO:0000176"
}
},
{
"id":"KARI_1",
"name":"Ketol-acid reductoisomerase",
"metabolites":{
"2ahbut_c":-1.0,
"3hmop_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07915",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"KARI"
]
},
"annotation":{
"bigg.reaction":[
"KARI_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3HAD120",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C12:0)",
"metabolites":{
"3hddecACP_c":-1.0,
"h2o_c":1.0,
"tddec2eACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD120"
]
},
"annotation":{
"bigg.reaction":[
"3HAD120"
],
"ec-code":[
"2.3.1.85",
"4.2.1.58",
"4.2.1.60",
"2.3.1.86",
"4.2.1.61",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04965"
],
"metanetx.reaction":[
"MNXR94877"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05331"
]
}
},
{
"id":"OGMEACPD",
"name":"3-Oxo-glutaryl-[ACP] methyl ester dehydratase",
"metabolites":{
"egmeACP_c":1.0,
"h2o_c":1.0,
"hgmeACP_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Cofactor biosynthesis: Biotin biosynthesis",
"notes":{
"original_bigg_ids":[
"OGMEACPD"
]
},
"annotation":{
"bigg.reaction":[
"OGMEACPD"
],
"biocyc":[
"META:RXN-11477"
],
"ec-code":[
"4.2.1.59"
],
"kegg.reaction":[
"R10117"
],
"metanetx.reaction":[
"MNXR102159"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ACCOAC",
"name":"Acetyl-CoA carboxylase",
"metabolites":{
"accoa_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"hco3_c":-1.0,
"malcoa_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07060 and SYNPCC7942_RS08145 and SYNPCC7942_RS09925 and SYNPCC7942_RS13030",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"ACCOAC"
]
},
"annotation":{
"bigg.reaction":[
"ACCOAC"
],
"biocyc":[
"META:ACETYL-COA-CARBOXYLTRANSFER-RXN"
],
"ec-code":[
"6.4.1.2"
],
"kegg.reaction":[
"R00742"
],
"metanetx.reaction":[
"MNXR95219"
],
"reactome.reaction":[
"R-PFA-200555",
"R-SPO-75851",
"R-DRE-8876889",
"R-CFA-200555",
"R-DME-75851",
"R-HSA-75851",
"R-HSA-8876889",
"R-BTA-200555",
"R-BTA-8876889",
"R-DRE-75851",
"R-XTR-200555",
"R-SSC-8876889",
"R-CFA-8876889",
"R-MMU-200555",
"R-DRE-200555",
"R-MMU-8876889",
"R-RNO-200555",
"R-SPO-8876889",
"R-RNO-75851",
"R-PFA-75851",
"R-CEL-8876889",
"R-SCE-200555",
"R-TGU-8876889",
"R-GGA-200555",
"R-GGA-8876889",
"R-SCE-8876889",
"R-ATH-75851",
"R-SPO-200555",
"R-SSC-200555",
"R-DME-8876889",
"R-DDI-200555",
"R-ATH-200555",
"R-RNO-8876889",
"R-DME-200555",
"R-XTR-8876889",
"R-MMU-75851",
"R-DDI-8876889",
"R-CFA-75851",
"R-DDI-75851",
"R-PFA-8876889",
"R-CEL-200555",
"R-CEL-75851",
"R-HSA-200555",
"R-TGU-75851",
"R-BTA-75851",
"R-TGU-200555",
"R-ATH-8876889",
"R-SCE-75851",
"R-SSC-75851",
"R-GGA-75851",
"R-XTR-75851"
],
"rhea":[
"11308",
"11311",
"11310",
"11309"
],
"sabiork":[
"542"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00533"
]
}
},
{
"id":"ASPO5",
"name":"L-aspartate oxidase",
"metabolites":{
"asp__L_c":-1.0,
"fum_c":-1.0,
"h_c":1.0,
"iasp_c":1.0,
"succ_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09540",
"subsystem":"Cofactor biosynthesis: Nicotinate and Nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"ASPO5"
]
},
"annotation":{
"bigg.reaction":[
"ASPO5"
],
"biocyc":[
"META:RXN-9772"
],
"ec-code":[
"1.5.99"
],
"metanetx.reaction":[
"MNXR96093"
],
"rhea":[
"30043",
"30045",
"30044",
"30046"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08168"
]
}
},
{
"id":"PTHPS",
"name":"6-pyruvoyltetrahydropterin synthase",
"metabolites":{
"6pthp_c":1.0,
"ahdt_c":-1.0,
"pppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06065",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"PTHPS"
]
},
"annotation":{
"bigg.reaction":[
"PTHPS"
],
"biocyc":[
"META:4.2.3.12-RXN"
],
"ec-code":[
"4.2.3.12"
],
"kegg.reaction":[
"R04286"
],
"metanetx.reaction":[
"MNXR141260"
],
"rhea":[
"22050",
"22051",
"22048",
"22049"
],
"sabiork":[
"9435"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02986"
]
}
},
{
"id":"CITCIa",
"name":"Citramalate dehydratase",
"metabolites":{
"citac_c":1.0,
"citm_c":-1.0,
"h2o_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09625 and SYNPCC7942_RS12945",
"subsystem":"Amino acid metabolism: Valine, Leucine and Isoleucine biosynthesis",
"notes":{
"original_bigg_ids":[
"CITCIa"
]
},
"annotation":{
"bigg.reaction":[
"CITCIa"
],
"metanetx.reaction":[
"MNXR96729"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DAGK_OLE_HDE",
"name":"Diacylglycerol kinase(18:1(9Z)/16:1(9Z))",
"metabolites":{
"12dgr1819Z1619Z_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pa1819Z1619Z_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02045",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DAGK_OLE_HDE"
]
},
"annotation":{
"bigg.reaction":[
"DAGK_OLE_HDE"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DAGK_OLE_PALM",
"name":"Diacylglycerol kinase(18:1(9Z)/16:0)",
"metabolites":{
"12dgr1819Z160_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pa1819Z160_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02045",
"subsystem":"Phosphoglycerolipid metabolism",
"notes":{
"original_bigg_ids":[
"DAGK_OLE_PALM"
]
},
"annotation":{
"bigg.reaction":[
"DAGK_OLE_PALM"
],
"sbo":"SBO:0000176"
}
},
{
"id":"3HAD100",
"name":"3-hydroxyacyl-[acyl-carrier-protein] dehydratase (n-C10:0)",
"metabolites":{
"3hdecACP_c":-1.0,
"h2o_c":1.0,
"tdec2eACP_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS04785",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3HAD100"
]
},
"annotation":{
"bigg.reaction":[
"3HAD100"
],
"ec-code":[
"2.3.1.85",
"4.2.1.58",
"4.2.1.60",
"2.3.1.86",
"4.2.1.61",
"4.2.1.59",
"2.3.1.-"
],
"kegg.reaction":[
"R04535"
],
"metanetx.reaction":[
"MNXR94876"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05333"
]
}
},
{
"id":"PNTK",
"name":"Pantothenate kinase",
"metabolites":{
"4ppan_c":1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pnto__R_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09185",
"subsystem":"Cofactor biosynthesis: Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PNTK"
]
},
"annotation":{
"bigg.reaction":[
"PNTK"
],
"biocyc":[
"META:PANTOTHENATE-KIN-RXN"
],
"ec-code":[
"2.7.1.33"
],
"kegg.reaction":[
"R03018"
],
"metanetx.reaction":[
"MNXR103050"
],
"reactome.reaction":[
"R-MMU-199203",
"R-XTR-199203",
"R-HSA-196857",
"R-TGU-196857",
"R-BTA-199203",
"R-DRE-199203",
"R-CFA-199203",
"R-SSC-199203",
"R-CFA-196857",
"R-TGU-199203",
"R-SSC-196857",
"R-PFA-199203",
"R-MMU-196857",
"R-SCE-196857",
"R-RNO-199203",
"R-GGA-199203",
"R-DME-199203",
"R-DRE-196857",
"R-BTA-196857",
"R-HSA-199203",
"R-XTR-196857",
"R-GGA-196857",
"R-DME-196857",
"R-PFA-196857",
"R-SCE-199203",
"R-RNO-196857"
],
"rhea":[
"16376",
"16375",
"16373",
"16374"
],
"sabiork":[
"2868"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn12510"
]
}
},
{
"id":"3OAR120",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C12:0)",
"metabolites":{
"3hddecACP_c":1.0,
"3oddecACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR120"
]
},
"annotation":{
"bigg.reaction":[
"3OAR120"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04964"
],
"metanetx.reaction":[
"MNXR94942"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05340"
]
}
},
{
"id":"3OAR60",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C6:0)",
"metabolites":{
"3hhexACP_c":1.0,
"3ohexACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR60"
]
},
"annotation":{
"bigg.reaction":[
"3OAR60"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04953"
],
"metanetx.reaction":[
"MNXR94952"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05337"
]
}
},
{
"id":"3OAR100",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C10:0)",
"metabolites":{
"3hdecACP_c":1.0,
"3odecACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR100"
]
},
"annotation":{
"bigg.reaction":[
"3OAR100"
],
"biocyc":[
"META:RXN-9528"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04534"
],
"metanetx.reaction":[
"MNXR94941"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05338"
]
}
},
{
"id":"3OAR80",
"name":"3-oxoacyl-[acyl-carrier-protein] reductase (n-C8:0)",
"metabolites":{
"3hoctACP_c":1.0,
"3ooctACP_c":-1.0,
"h_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03505",
"subsystem":"Fatty acid biosynthesis",
"notes":{
"original_bigg_ids":[
"3OAR80"
]
},
"annotation":{
"bigg.reaction":[
"3OAR80"
],
"biocyc":[
"META:RXN-9524"
],
"ec-code":[
"2.3.1.86",
"2.3.1.-",
"2.3.1.85",
"1.1.1.100"
],
"kegg.reaction":[
"R04536"
],
"metanetx.reaction":[
"MNXR94953"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05341"
]
}
},
{
"id":"ALCD1",
"name":"Alcohol dehydrogenase (methanol)",
"metabolites":{
"fald_c":1.0,
"h_c":1.0,
"meoh_c":-1.0,
"nad_c":-1.0,
"nadh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS11615 or SYNPCC7942_RS08430",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"ALCD1"
]
},
"annotation":{
"bigg.reaction":[
"ALCD1"
],
"biocyc":[
"META:METHANOL-DEHYDROGENASE-RXN"
],
"ec-code":[
"1.1.1.244"
],
"kegg.reaction":[
"R00605"
],
"metanetx.reaction":[
"MNXR95708"
],
"rhea":[
"19402",
"19401",
"19404",
"19403"
],
"sabiork":[
"997"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00430"
]
}
},
{
"id":"NDH_1_1_um_copy1",
"name":"NAD(P)H dehydrogenase (plastoquinone-8 & 4 protons)( Thylakoid)",
"metabolites":{
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h_c":-5.0,
"h_u":3.0,
"pq_um":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06865 and SYNPCC7942_RS07240 and SYNPCC7942_RS06045 and SYNPCC7942_RS06880 and SYNPCC7942_RS06875 and SYNPCC7942_RS08870 and SYNPCC7942_RS06870 and SYNPCC7942_RS06055 and SYNPCC7942_RS06050 and Synpcc7942_0413 and SYNPCC7942_RS11345 and SYNPCC7942_RS10050 and SYNPCC7942_RS12620 and SYNPCC7942_RS13830 and SYNPCC7942_RS09675 and SYNPCC7942_RS05670 and Synpcc7942_0668 and Synpcc7942_0491 and SYNPCC7942_RS07360 and SYNPCC7942_RS10025",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NDH-1(1)um",
"NDH-1(2)um"
]
},
"annotation":{
"bigg.reaction":[
"NDH_1_1_um"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NDH_1_4_um_copy1",
"name":"NAD(P)H dehydrogenase, carbon dioxide coupled (plastoquinone-8 & 4 protons)( Thylakoid)",
"metabolites":{
"co2_c":-1.0,
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h2o_c":-1.0,
"h_c":-4.0,
"h_u":3.0,
"hco3_c":1.0,
"pq_um":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06865 and SYNPCC7942_RS07240 and SYNPCC7942_RS06045 and SYNPCC7942_RS06880 and SYNPCC7942_RS06875 and SYNPCC7942_RS08870 and SYNPCC7942_RS06870 and SYNPCC7942_RS06055 and SYNPCC7942_RS06050 and Synpcc7942_0413 and SYNPCC7942_RS11345 and SYNPCC7942_RS10050 and SYNPCC7942_RS12620 and SYNPCC7942_RS13830 and SYNPCC7942_RS09675 and SYNPCC7942_RS05670 and SYNPCC7942_RS10605 and SYNPCC7942_RS10600 and SYNPCC7942_RS10610 and SYNPCC7942_RS10615",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NDH-1(3)um",
"NDH-1(4)um"
]
},
"annotation":{
"bigg.reaction":[
"NDH_1_4_um"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PCHLDA430",
"name":"Protochlorophyllide excitation (430nm photon)",
"metabolites":{
"pchlld_c":-1.0,
"pchlld_exc_c":1.0,
"photon430_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12700",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PCHLDA430"
]
},
"annotation":{
"bigg.reaction":[
"PCHLDA430"
],
"sbo":"SBO:0000185"
}
},
{
"id":"SFGTHi",
"name":"S-Formylglutathione hydralase",
"metabolites":{
"Sfglutth_c":-1.0,
"for_c":1.0,
"gthrd_c":1.0,
"h2o_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02335",
"subsystem":"Cofactor biosynthesis: Lipoate biosynthesis",
"notes":{
"original_bigg_ids":[
"SFGTHi"
]
},
"annotation":{
"bigg.reaction":[
"SFGTHi"
],
"biocyc":[
"META:S-FORMYLGLUTATHIONE-HYDROLASE-RXN"
],
"ec-code":[
"3.1.2.12"
],
"kegg.reaction":[
"R00527"
],
"metanetx.reaction":[
"MNXR104357"
],
"reactome.reaction":[
"R-CFA-5693724",
"R-DRE-5693724",
"R-GGA-5693724",
"R-DDI-5693724",
"R-TGU-5693724",
"R-RNO-5693724",
"R-HSA-5693724",
"R-SSC-5693724",
"R-XTR-5693724",
"R-SCE-5693724",
"R-MMU-5693724",
"R-CEL-5693724",
"R-ATH-5693724",
"R-DME-5693724",
"R-OSA-5693724",
"R-BTA-5693724"
],
"rhea":[
"14963",
"14964",
"14962",
"14961"
],
"sabiork":[
"945"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00377"
]
}
},
{
"id":"PCHLDA650",
"name":"Protochlorophyllide excitation (650nm photon)",
"metabolites":{
"pchlld_c":-1.0,
"pchlld_exc_c":1.0,
"photon650_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12700",
"subsystem":"Porphyrin and chlorophyll metabolism",
"notes":{
"original_bigg_ids":[
"PCHLDA650"
]
},
"annotation":{
"bigg.reaction":[
"PCHLDA650"
],
"sbo":"SBO:0000185"
}
},
{
"id":"GGCLUT2",
"name":"Glutathione-specific gamma-glutamylcyclotransferase",
"metabolites":{
"5oxpro_c":1.0,
"cgly_c":1.0,
"gthrd_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05810",
"subsystem":"Metabolism of other amino acids: Glutathione metabolism",
"notes":{
"original_bigg_ids":[
"GGCLUT2"
]
},
"annotation":{
"bigg.reaction":[
"GGCLUT2"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SPR",
"name":"Sepiapterin reductase",
"metabolites":{
"6pthp_c":-1.0,
"h_c":-2.0,
"nadp_c":2.0,
"nadph_c":-2.0,
"thbpt_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09235",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"SPR"
]
},
"annotation":{
"bigg.reaction":[
"SPR"
],
"biocyc":[
"META:RXN-8853"
],
"ec-code":[
"1.1.1.153"
],
"kegg.reaction":[
"R08208"
],
"metanetx.reaction":[
"MNXR138834"
],
"reactome.reaction":[
"R-CFA-1475414",
"R-DDI-1475414",
"R-HSA-1475414",
"R-DRE-1475414",
"R-XTR-1475414",
"R-SCE-1475414",
"R-DME-1475414",
"R-GGA-1475414",
"R-SSC-1475414",
"R-BTA-1475414",
"R-RNO-1475414",
"R-MMU-1475414"
],
"rhea":[
"32629",
"24741",
"32630",
"32628",
"24738",
"24739",
"24740",
"32627"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn11742"
]
}
},
{
"id":"OPAH",
"name":"5-Oxoproline amidohydrolase (ATP-hydrolysing) (ir)",
"metabolites":{
"5oxpro_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-2.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12145",
"subsystem":"Metabolism of other amino acids: Glutathione metabolism",
"notes":{
"original_bigg_ids":[
"OPAH"
]
},
"annotation":{
"bigg.reaction":[
"OPAH"
],
"biocyc":[
"META:5-OXOPROLINASE-ATP-HYDROLYSING-RXN"
],
"ec-code":[
"3.5.2.9"
],
"kegg.reaction":[
"R00251"
],
"metanetx.reaction":[
"MNXR138674"
],
"reactome.reaction":[
"R-SPO-1247935",
"R-OSA-1247935",
"R-HSA-1247935",
"R-ATH-1247935",
"R-DDI-1247935",
"R-BTA-1247935",
"R-DME-1247935",
"R-CFA-1247935",
"R-DRE-1247935",
"R-SCE-1247935",
"R-XTR-1247935",
"R-RNO-1247935",
"R-CEL-1247935",
"R-SSC-1247935",
"R-MMU-1247935"
],
"rhea":[
"10348",
"10349",
"10350",
"10351"
],
"sabiork":[
"8623"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00186"
]
}
},
{
"id":"ACGAMK",
"name":"N-acetylglucosamine kinase",
"metabolites":{
"acgam6p_c":1.0,
"acgam_c":-1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS10700",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"ACGAMK"
]
},
"annotation":{
"bigg.reaction":[
"ACGAMK"
],
"biocyc":[
"META:N-ACETYLGLUCOSAMINE-KINASE-RXN"
],
"ec-code":[
"2.7.1.59"
],
"kegg.reaction":[
"R01201"
],
"metanetx.reaction":[
"MNXR95249"
],
"rhea":[
"17420",
"17418",
"17419",
"17417"
],
"sabiork":[
"1435"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00892"
]
}
},
{
"id":"AMANAPEr",
"name":"N-acetylmannosamine 6-phosphate epimerase",
"metabolites":{
"acgam6p_c":1.0,
"acmanap_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12525",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"AMANAPEr"
]
},
"annotation":{
"bigg.reaction":[
"AMANAPEr"
],
"biocyc":[
"META:NANE-RXN"
],
"ec-code":[
"5.1.3.9"
],
"kegg.reaction":[
"R02087"
],
"metanetx.reaction":[
"MNXR95804"
],
"rhea":[
"25259",
"25257",
"25258",
"25260"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01506"
]
}
},
{
"id":"AGDC",
"name":"N-acetylglucosamine-6-phosphate deacetylase",
"metabolites":{
"ac_c":1.0,
"acgam6p_c":-1.0,
"gam6p_c":1.0,
"h2o_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02250",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"AGDC"
]
},
"annotation":{
"bigg.reaction":[
"AGDC"
],
"biocyc":[
"META:NAG6PDEACET-RXN"
],
"ec-code":[
"3.5.1.25"
],
"kegg.reaction":[
"R02059"
],
"metanetx.reaction":[
"MNXR95528"
],
"rhea":[
"22936",
"22938",
"22937",
"22939"
],
"sabiork":[
"2076"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01484"
]
}
},
{
"id":"ANHMK",
"name":"1,6-anhydrous-N-Acetylmuramate kinase",
"metabolites":{
"acmum6p_c":1.0,
"adp_c":1.0,
"anhm_c":-1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05610",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"ANHMK"
]
},
"annotation":{
"bigg.reaction":[
"ANHMK"
],
"metanetx.reaction":[
"MNXR95840"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08136"
]
}
},
{
"id":"RNDR4",
"name":"Ribonucleoside-diphosphate reductase (UDP)",
"metabolites":{
"dudp_c":1.0,
"h2o_c":1.0,
"trdox_c":1.0,
"trdrd_c":-1.0,
"udp_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08210",
"subsystem":"Purine and Pyrimidine Biosynthesis",
"notes":{
"original_bigg_ids":[
"RNDR4"
]
},
"annotation":{
"bigg.reaction":[
"RNDR4"
],
"biocyc":[
"META:UDPREDUCT-RXN"
],
"ec-code":[
"1.17.4.1"
],
"kegg.reaction":[
"R02018"
],
"metanetx.reaction":[
"MNXR104066"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn06075"
]
}
},
{
"id":"TRPS2",
"name":"Tryptophan synthase (indole)",
"metabolites":{
"h2o_c":1.0,
"indole_c":-1.0,
"ser__L_c":-1.0,
"trp__L_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02095 and SYNPCC7942_RS10880",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"TRPS2"
]
},
"annotation":{
"bigg.reaction":[
"TRPS2"
],
"biocyc":[
"META:RXN0-2382"
],
"ec-code":[
"4.2.1.122",
"4.2.1.20"
],
"kegg.reaction":[
"R00674"
],
"metanetx.reaction":[
"MNXR104946"
],
"rhea":[
"26436",
"26435",
"26437",
"26434"
],
"sabiork":[
"1054"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00474"
]
}
},
{
"id":"PSICSum",
"name":"Photosystem I charge separation",
"metabolites":{
"chla_qy1_exc_c":-1.0,
"cholphya_c":1.0,
"p700_exc_um":1.0,
"p700_um":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02075 and SYNPCC7942_RS02720 and SYNPCC7942_RS03350 and SYNPCC7942_RS04735 and SYNPCC7942_RS05140 and SYNPCC7942_RS06400 and SYNPCC7942_RS06405 and SYNPCC7942_RS06760 and SYNPCC7942_RS09705 and SYNPCC7942_RS10390 and SYNPCC7942_RS10395 and SYNPCC7942_RS11800 and SYNPCC7942_RS11900 and SYNPCC7942_RS11905 and SYNPCC7942_RS12755",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PSICSum"
]
},
"annotation":{
"bigg.reaction":[
"PSICSum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"NAD_H2",
"name":"NAD-linked hydrogenase",
"metabolites":{
"h2_c":1.0,
"h_c":-1.0,
"nad_c":1.0,
"nadh_c":-1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12970 and SYNPCC7942_RS12975 and SYNPCC7942_RS12980 and SYNPCC7942_RS12985 and SYNPCC7942_RS12990 and SYNPCC7942_RS12995 and SYNPCC7942_RS01415 and SYNPCC7942_RS01420 and SYNPCC7942_RS07025",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NAD_H2"
]
},
"annotation":{
"bigg.reaction":[
"NAD_H2"
],
"biocyc":[
"META:HYDROGEN-DEHYDROGENASE-RXN"
],
"ec-code":[
"1.12.1.5",
"1.12.1.2"
],
"kegg.reaction":[
"R00700"
],
"metanetx.reaction":[
"MNXR101899"
],
"rhea":[
"24639",
"24637",
"24638",
"24636"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn05887"
]
}
},
{
"id":"PPND",
"name":"Prephenate dehydrogenase",
"metabolites":{
"34hpp_c":1.0,
"co2_c":1.0,
"nad_c":-1.0,
"nadh_c":1.0,
"pphn_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS03380",
"subsystem":"Amino acid metabolism: Phenylalanine, Tyrosine, Tryptophan biosynthesis",
"notes":{
"original_bigg_ids":[
"PPND"
]
},
"annotation":{
"bigg.reaction":[
"PPND"
],
"biocyc":[
"META:PREPHENATEDEHYDROG-RXN"
],
"ec-code":[
"1.3.1.12"
],
"kegg.reaction":[
"R01728"
],
"metanetx.reaction":[
"MNXR103121"
],
"rhea":[
"13872",
"13870",
"13869",
"13871"
],
"sabiork":[
"1839"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01268"
]
}
},
{
"id":"CBFCum",
"name":"Cytb6f complex",
"metabolites":{
"h_c":-2.0,
"h_u":4.0,
"pcox_u":-2.0,
"pcrd_u":2.0,
"pq_um":1.0,
"pqh2_um":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00575 and SYNPCC7942_RS02420 and SYNPCC7942_RS01640 and SYNPCC7942_RS01645 and Synpcc7942_1478 and SYNPCC7942_RS02595 and SYNPCC7942_RS06310 and SYNPCC7942_RS06315 and SYNPCC7942_RS07560 and SYNPCC7942_RS11850 and SYNPCC7942_RS11855 and SYNPCC7942_RS12325",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"CBFCum"
]
},
"annotation":{
"bigg.reaction":[
"CBFCum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"ACM6PH",
"name":"N-acetylmuramate 6-phosphate hydrolase",
"metabolites":{
"acgam6p_c":1.0,
"acmum6p_c":-1.0,
"h2o_c":-1.0,
"lac__D_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13120",
"subsystem":"Nucleotide sugar metabolism",
"notes":{
"original_bigg_ids":[
"ACM6PH"
]
},
"annotation":{
"bigg.reaction":[
"ACM6PH"
],
"ec-code":[
"4.2.1.126"
],
"kegg.reaction":[
"R08555"
],
"metanetx.reaction":[
"MNXR95273"
],
"rhea":[
"26411",
"26410",
"26413",
"26412"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08044"
]
}
},
{
"id":"SUCR",
"name":"Sucrose hydrolyzing enzyme",
"metabolites":{
"fru_c":1.0,
"glc__D_c":1.0,
"h2o_c":-1.0,
"sucr_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02025",
"subsystem":"Glycogen and sucrose metabolism",
"notes":{
"original_bigg_ids":[
"SUCR"
]
},
"annotation":{
"bigg.reaction":[
"SUCR"
],
"ec-code":[
"3.2.1.26",
"3.2.1.10",
"2.4.1.9",
"2.4.1.10",
"3.2.1.48",
"3.2.1.20",
"2.4.1.4"
],
"kegg.reaction":[
"R06087",
"R00801"
],
"metanetx.reaction":[
"MNXR104638"
],
"sabiork":[
"1146"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00575"
]
}
},
{
"id":"CLt3_1pp",
"name":"Chloride transport out via proton antiport (1:1) (periplasm)",
"metabolites":{
"cl_c":-1.0,
"cl_p":1.0,
"h_c":-1.0,
"h_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08050 and SYNPCC7942_RS08110 and SYNPCC7942_RS06440",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"CLt3_1pp"
]
},
"annotation":{
"bigg.reaction":[
"CLt3_1pp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"Ktu",
"name":"Potassium transport (thylakoid)",
"metabolites":{
"k_c":-1.0,
"k_u":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06320",
"subsystem":"Transport: Outer Membrane",
"notes":{
"original_bigg_ids":[
"Ktu"
]
},
"annotation":{
"bigg.reaction":[
"Ktu"
],
"sbo":"SBO:0000185"
}
},
{
"id":"THBTGT",
"name":"UDP-glucose:tetrahydrobiopterin glucosyltransferase",
"metabolites":{
"gthbpt_c":1.0,
"h_c":1.0,
"thbpt_c":-1.0,
"udp_c":1.0,
"udpg_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS09735",
"subsystem":"Cofactor biosynthesis: Folate biosynthesis",
"notes":{
"original_bigg_ids":[
"THBTGT"
]
},
"annotation":{
"bigg.reaction":[
"THBTGT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"FDH6",
"name":"Formate dehydrogenase (cytochrome c553)",
"metabolites":{
"co2_c":2.0,
"for_c":-2.0,
"h2o_c":2.0,
"h_c":-2.0,
"o2_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS12130",
"subsystem":"Photorespiration/Glyoxylate Degredation",
"notes":{
"original_bigg_ids":[
"FDH6"
]
},
"annotation":{
"bigg.reaction":[
"FDH6"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PCXHtpp",
"name":"H+ export PcxA",
"metabolites":{
"h_c":-1.0,
"h_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS05090",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"PCXHtpp"
]
},
"annotation":{
"bigg.reaction":[
"PCXHtpp"
],
"sbo":"SBO:0000185"
}
},
{
"id":"THISAT",
"name":"ThiS adenylyltransferase sulfur carrier protein",
"metabolites":{
"athis_c":1.0,
"atp_c":-1.0,
"h_c":-1.0,
"ppi_c":1.0,
"this_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00800 and SYNPCC7942_RS05425",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"THISAT"
]
},
"annotation":{
"bigg.reaction":[
"THISAT"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PSIIum",
"name":"Photosystem II",
"metabolites":{
"h2o_u":-2.0,
"h_c":-3.9996,
"h_u":4.0,
"o2_u":1.0,
"p680_exc_um":-4.0,
"p680_um":4.0,
"pq_um":-1.9998,
"pqh2_um":1.9998,
"ps2d1_exc_um":0.0004,
"ps2d1_um":-0.0004
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(SYNPCC7942_RS01140 and SYNPCC7942_RS01145 and SYNPCC7942_RS01500 and SYNPCC7942_RS01750 and SYNPCC7942_RS02165 and SYNPCC7942_RS13675 and SYNPCC7942_RS03355 and SYNPCC7942_RS03360 and SYNPCC7942_RS03570 and SYNPCC7942_RS03575 and SYNPCC7942_RS03585 and SYNPCC7942_RS04600 and SYNPCC7942_RS05330 and SYNPCC7942_RS13745 and SYNPCC7942_RS06020 and SYNPCC7942_RS06025 and SYNPCC7942_RS06030 and SYNPCC7942_RS08350 and SYNPCC7942_RS08550 and SYNPCC7942_RS08555 and SYNPCC7942_RS13795 and SYNPCC7942_RS09545 and SYNPCC7942_RS09955 and SYNPCC7942_RS10225 and SYNPCC7942_RS11400 and SYNPCC7942_RS12590 and Synpcc7942_2010) or (SYNPCC7942_RS01140 and SYNPCC7942_RS01145 and SYNPCC7942_RS01500 and SYNPCC7942_RS01750 and SYNPCC7942_RS02165 and SYNPCC7942_RS13675 and SYNPCC7942_RS03355 and SYNPCC7942_RS03360 and SYNPCC7942_RS03570 and SYNPCC7942_RS03575 and SYNPCC7942_RS03585 and SYNPCC7942_RS05330 and SYNPCC7942_RS13745 and SYNPCC7942_RS06020 and SYNPCC7942_RS06025 and SYNPCC7942_RS06030 and SYNPCC7942_RS07110 and SYNPCC7942_RS08350 and SYNPCC7942_RS08550 and SYNPCC7942_RS08555 and SYNPCC7942_RS13795 and SYNPCC7942_RS09545 and SYNPCC7942_RS09955 and SYNPCC7942_RS10225 and SYNPCC7942_RS11400 and SYNPCC7942_RS12590 and Synpcc7942_2010)",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PSIIum"
]
},
"annotation":{
"bigg.reaction":[
"PSIIum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"ATPSum",
"name":"ATP synthase (thylakoid membrane)",
"metabolites":{
"adp_c":-3.0,
"atp_c":3.0,
"h2o_c":3.0,
"h_c":10.0,
"h_u":-13.0,
"pi_c":-3.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01680 and SYNPCC7942_RS01685 and SYNPCC7942_RS01690 and SYNPCC7942_RS01695 and SYNPCC7942_RS01700 and SYNPCC7942_RS01705 and SYNPCC7942_RS01710 and SYNPCC7942_RS01715 and SYNPCC7942_RS11770 and SYNPCC7942_RS11775",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"ATPSum"
]
},
"annotation":{
"bigg.reaction":[
"ATPSum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"CYSDES",
"name":"Cysteine desulfurase",
"metabolites":{
"ala__L_c":1.0,
"cys__L_c":-1.0,
"h_c":1.0,
"iscsh_c":-1.0,
"iscssh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS02300 and SYNPCC7942_RS09790",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"CYSDES"
]
},
"annotation":{
"bigg.reaction":[
"CYSDES"
],
"sbo":"SBO:0000176"
}
},
{
"id":"NO3abcpp",
"name":"Nitrate transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"no3_c":1.0,
"no3_p":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS06335 and SYNPCC7942_RS06340 and SYNPCC7942_RS06345 and SYNPCC7942_RS06350",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"NO3abcpp"
]
},
"annotation":{
"bigg.reaction":[
"NO3abcpp"
],
"biocyc":[
"META:3.6.3.26-RXN"
],
"ec-code":[
"3.6.3.26"
],
"metanetx.reaction":[
"MNXR101991"
],
"rhea":[
"13182#1",
"13183#1",
"13184#1",
"13181#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05171"
]
}
},
{
"id":"GLNabcpp",
"name":"L-glutamine transport via ABC system (periplasm)",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"gln__L_c":1.0,
"gln__L_p":-1.0,
"h2o_c":-1.0,
"h_c":1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS01255 and SYNPCC7942_RS01260 and SYNPCC7942_RS01265 and SYNPCC7942_RS01270",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"GLNabcpp"
]
},
"annotation":{
"bigg.reaction":[
"GLNabcpp"
],
"biocyc":[
"META:ABC-12-RXN"
],
"ec-code":[
"3.6.3.21"
],
"metanetx.reaction":[
"MNXR100258"
],
"rhea":[
"29895#1",
"29897#1",
"29898#1",
"29896#1"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn11233",
"rxn05196",
"rxn05155",
"rxn11101",
"rxn08624"
]
}
},
{
"id":"GLNS",
"name":"Glutamine synthetase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"gln__L_c":1.0,
"glu__L_c":-1.0,
"h_c":1.0,
"nh4_c":-1.0,
"pi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00860 or SYNPCC7942_RS11670 or SYNPCC7942_RS10955",
"subsystem":"Amino acid metabolism: Alanine, Aspartate and Glutamate metabolism",
"notes":{
"original_bigg_ids":[
"GLNS"
]
},
"annotation":{
"bigg.reaction":[
"GLNS"
],
"biocyc":[
"META:GLUTAMINESYN-RXN"
],
"ec-code":[
"6.3.1.2"
],
"kegg.reaction":[
"R00253"
],
"metanetx.reaction":[
"MNXR100024"
],
"reactome.reaction":[
"R-GGA-70606",
"R-RNO-70606",
"R-TGU-70606",
"R-DME-70606",
"R-CEL-70606",
"R-DRE-70606",
"R-XTR-70606",
"R-SPO-70606",
"R-ATH-70606",
"R-CFA-70606",
"R-BTA-70606",
"R-OSA-70606",
"R-SSC-70606",
"R-MMU-70606",
"R-HSA-70606",
"R-SCE-70606"
],
"rhea":[
"16172",
"16171",
"16169",
"16170"
],
"sabiork":[
"760"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00187"
]
}
},
{
"id":"MDDEP1pp",
"name":"Murein D,D-endopeptidase (murein4px4p) (periplasm)",
"metabolites":{
"h2o_p":-1.0,
"murein4p4p_p":1.0,
"murein4px4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00700 or SYNPCC7942_RS01755 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDEP1pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDEP1pp"
],
"metanetx.reaction":[
"MNXR143210"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08895"
]
}
},
{
"id":"THII",
"name":"Thiamine biosynthesis step ThiI",
"metabolites":{
"amp_c":1.0,
"athis_c":-1.0,
"iscsh_c":1.0,
"iscssh_c":-1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"thissh_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00800 and SYNPCC7942_RS05425",
"subsystem":"Cofactor biosynthesis: Thiamine (B1)",
"notes":{
"original_bigg_ids":[
"THII"
]
},
"annotation":{
"bigg.reaction":[
"THII"
],
"sbo":"SBO:0000176"
}
},
{
"id":"SHS1",
"name":"Siroheme synthsis",
"metabolites":{
"ahcys_c":2.0,
"amet_c":-2.0,
"fe2_c":-1.0,
"h_c":5.0,
"nad_c":-1.0,
"nadh_c":1.0,
"sheme_c":1.0,
"uppg3_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS13295 and SYNPCC7942_RS13300",
"subsystem":"Cofactor biosynthesis: Vitamin B12",
"notes":{
"original_bigg_ids":[
"SHS1"
]
},
"annotation":{
"bigg.reaction":[
"SHS1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PSIICSum",
"name":"Photosystem II charge separation",
"metabolites":{
"chla_qy2_exc_c":-1.0,
"cholphya_c":1.0,
"p680_exc_um":1.0,
"p680_um":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(SYNPCC7942_RS01140 and SYNPCC7942_RS01145 and SYNPCC7942_RS01500 and SYNPCC7942_RS01750 and SYNPCC7942_RS02165 and SYNPCC7942_RS13675 and SYNPCC7942_RS03355 and SYNPCC7942_RS03360 and SYNPCC7942_RS03570 and SYNPCC7942_RS03575 and SYNPCC7942_RS03585 and SYNPCC7942_RS04600 and SYNPCC7942_RS05330 and SYNPCC7942_RS13745 and SYNPCC7942_RS06020 and SYNPCC7942_RS06025 and SYNPCC7942_RS06030 and SYNPCC7942_RS08350 and SYNPCC7942_RS08550 and SYNPCC7942_RS08555 and SYNPCC7942_RS13795 and SYNPCC7942_RS09545 and SYNPCC7942_RS09955 and SYNPCC7942_RS10225 and SYNPCC7942_RS11400 and SYNPCC7942_RS12590 and Synpcc7942_2010) or (SYNPCC7942_RS01140 and SYNPCC7942_RS01145 and SYNPCC7942_RS01500 and SYNPCC7942_RS01750 and SYNPCC7942_RS02165 and SYNPCC7942_RS13675 and SYNPCC7942_RS03355 and SYNPCC7942_RS03360 and SYNPCC7942_RS03570 and SYNPCC7942_RS03575 and SYNPCC7942_RS03585 and SYNPCC7942_RS05330 and SYNPCC7942_RS13745 and SYNPCC7942_RS06020 and SYNPCC7942_RS06025 and SYNPCC7942_RS06030 and SYNPCC7942_RS07110 and SYNPCC7942_RS08350 and SYNPCC7942_RS08550 and SYNPCC7942_RS08555 and SYNPCC7942_RS13795 and SYNPCC7942_RS09545 and SYNPCC7942_RS09955 and SYNPCC7942_RS10225 and SYNPCC7942_RS11400 and SYNPCC7942_RS12590 and Synpcc7942_2010)",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"PSIICSum"
]
},
"annotation":{
"bigg.reaction":[
"PSIICSum"
],
"sbo":"SBO:0000185"
}
},
{
"id":"NDH_1_1_um_copy2",
"name":"NAD(P)H dehydrogenase (plastoquinone-8 & 4 protons)( Thylakoid)",
"metabolites":{
"fdxox_c":2.0,
"fdxrd_c":-2.0,
"h_c":-5.0,
"h_u":3.0,
"pq_um":-1.0,
"pqh2_um":1.0
},
"lower_bound":0.0,
"upper_bound":0.0,
"gene_reaction_rule":"SYNPCC7942_RS06865 and SYNPCC7942_RS07240 and SYNPCC7942_RS06045 and SYNPCC7942_RS06880 and SYNPCC7942_RS06875 and SYNPCC7942_RS08870 and SYNPCC7942_RS06870 and SYNPCC7942_RS06055 and SYNPCC7942_RS06050 and Synpcc7942_0413 and SYNPCC7942_RS11345 and SYNPCC7942_RS10050 and SYNPCC7942_RS12620 and SYNPCC7942_RS13830 and SYNPCC7942_RS09675 and SYNPCC7942_RS05670 and SYNPCC7942_RS10025 and Synpcc7942_0668 and Synpcc7942_0491 and SYNPCC7942_RS10020",
"subsystem":"Photosynthesis/respiration",
"notes":{
"original_bigg_ids":[
"NDH-1(1)um",
"NDH-1(2)um"
]
},
"annotation":{
"bigg.reaction":[
"NDH_1_1_um"
],
"sbo":"SBO:0000176"
}
},
{
"id":"ASNS1",
"name":"Asparagine synthase (glutamine-hydrolysing)",
"metabolites":{
"amp_c":1.0,
"asn__L_c":1.0,
"asp__L_c":-1.0,
"atp_c":-1.0,
"gln__L_c":-1.0,
"glu__L_c":1.0,
"h2o_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00590 and SYNPCC7942_RS10735 and SYNPCC7942_RS11805 and SYNPCC7942_RS06715",
"subsystem":"Amino acid metabolism: Lysine biosynthesis",
"notes":{
"original_bigg_ids":[
"ASNS1"
]
},
"annotation":{
"bigg.reaction":[
"ASNS1"
],
"biocyc":[
"META:ASNSYNB-RXN"
],
"ec-code":[
"6.3.5.4"
],
"kegg.reaction":[
"R00578"
],
"metanetx.reaction":[
"MNXR96059"
],
"reactome.reaction":[
"R-GGA-70599",
"R-BTA-70599",
"R-SPO-70599",
"R-PFA-70599",
"R-RNO-70599",
"R-MMU-70599",
"R-HSA-70599",
"R-SCE-70599",
"R-TGU-70599",
"R-DDI-70599",
"R-XTR-70599",
"R-ATH-70599",
"R-SSC-70599",
"R-DRE-70599",
"R-CFA-70599",
"R-OSA-70599"
],
"rhea":[
"12231",
"12229",
"12230",
"12228"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00416",
"rxn11214"
]
}
},
{
"id":"MDDCP3pp",
"name":"Murein D,D-carboxypeptidase (murein5p5p) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"h2o_p":-1.0,
"murein5p4p_p":1.0,
"murein5p5p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08520 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDCP3pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDCP3pp"
],
"ec-code":[
"3.4.16.4"
],
"metanetx.reaction":[
"MNXR101431"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08892"
]
}
},
{
"id":"MDDCP4pp",
"name":"Murein D,D-carboxypeptidase (murein5p4p) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"h2o_p":-1.0,
"murein4p4p_p":1.0,
"murein5p4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08520 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDCP4pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDCP4pp"
],
"ec-code":[
"3.4.16.4"
],
"metanetx.reaction":[
"MNXR143208"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08893"
]
}
},
{
"id":"MDDCP5pp",
"name":"Murein D,D-carboxypeptidase (murein5p3p) (periplasm)",
"metabolites":{
"ala__D_p":1.0,
"h2o_p":-1.0,
"murein4p3p_p":1.0,
"murein5p3p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS08520 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDCP5pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDCP5pp"
],
"ec-code":[
"3.4.16.4"
],
"metanetx.reaction":[
"MNXR143209"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08894"
]
}
},
{
"id":"MDDEP2pp",
"name":"Murein D,D-endopeptidase (murein3px4p) (periplasm)",
"metabolites":{
"h2o_p":-1.0,
"murein3px4p_p":-1.0,
"murein4p3p_p":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00700 or SYNPCC7942_RS01755 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDEP2pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDEP2pp"
],
"metanetx.reaction":[
"MNXR101435"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08896"
]
}
},
{
"id":"MDDEP3pp",
"name":"Murein D,D-endopeptidase (murein5px4p) (periplasm)",
"metabolites":{
"h2o_p":-1.0,
"murein5p4p_p":1.0,
"murein5px4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00700 or SYNPCC7942_RS01755 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDEP3pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDEP3pp"
],
"metanetx.reaction":[
"MNXR101436"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08897"
]
}
},
{
"id":"MDDEP4pp",
"name":"Murein D,D-endopeptidase (murein4px4px4p) (periplasm)",
"metabolites":{
"h2o_p":-1.0,
"murein4px4p4p_p":1.0,
"murein4px4px4p_p":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS00700 or SYNPCC7942_RS01755 or SYNPCC7942_RS09815",
"subsystem":"Murein Biosynthesis/Recycling",
"notes":{
"original_bigg_ids":[
"MDDEP4pp"
]
},
"annotation":{
"bigg.reaction":[
"MDDEP4pp"
],
"metanetx.reaction":[
"MNXR143211"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn08898"
]
}
},
{
"id":"MNHNAtpp",
"name":"Na+ export via NADPH dependent Mnh complex",
"metabolites":{
"h_p":-1.0,
"na1_c":-1.0,
"na1_p":1.0,
"nadp_c":1.0,
"nadph_c":-1.0,
"pq_cm":-1.0,
"pqh2_cm":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"SYNPCC7942_RS07535 and SYNPCC7942_RS07530 and SYNPCC7942_RS07525 and SYNPCC7942_RS07520 and SYNPCC7942_RS13760 and SYNPCC7942_RS07515 and SYNPCC7942_RS07510",
"subsystem":"Transport: Inner Membrane",
"notes":{
"original_bigg_ids":[
"MNHNAtpp"
]
},
"annotation":{
"bigg.reaction":[
"MNHNAtpp"
],
"sbo":"SBO:0000185"
}
}
],
"genes":[
{
"id":"SYNPCC7942_RS07560",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1479"
]
},
"annotation":{
"ncbigi":[
"499697316"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07560"
],
"refseq_old_locus_tag":[
"Synpcc7942_1479"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12325",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2426"
]
},
"annotation":{
"ncbigi":[
"499563207"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12325"
],
"refseq_old_locus_tag":[
"Synpcc7942_2426"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07410",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1448"
]
},
"annotation":{
"ncbigi":[
"499561639"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07410"
],
"refseq_old_locus_tag":[
"Synpcc7942_1448"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00575",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0113"
]
},
"annotation":{
"ncbigi":[
"499562920"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00575"
],
"refseq_old_locus_tag":[
"Synpcc7942_0113"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03625",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0707"
]
},
"annotation":{
"ncbigi":[
"499696957"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03625"
],
"refseq_old_locus_tag":[
"Synpcc7942_0707"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05285",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1029"
]
},
"annotation":{
"ncbigi":[
"499562046"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05285"
],
"refseq_old_locus_tag":[
"Synpcc7942_1029"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13255",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2602"
]
},
"annotation":{
"ncbigi":[
"499563035"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13255"
],
"refseq_old_locus_tag":[
"Synpcc7942_2602"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13265",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2604"
]
},
"annotation":{
"ncbigi":[
"499563033"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13265"
],
"refseq_old_locus_tag":[
"Synpcc7942_2604"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13260",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2603"
]
},
"annotation":{
"ncbigi":[
"499563034"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13260"
],
"refseq_old_locus_tag":[
"Synpcc7942_2603"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11755",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2312"
]
},
"annotation":{
"ncbigi":[
"499697669"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11755"
],
"refseq_old_locus_tag":[
"Synpcc7942_2312"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11855",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2332"
]
},
"annotation":{
"ncbigi":[
"499563297"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11855"
],
"refseq_old_locus_tag":[
"Synpcc7942_2332"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11850",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2331"
]
},
"annotation":{
"ncbigi":[
"499563298"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11850"
],
"refseq_old_locus_tag":[
"Synpcc7942_2331"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06310",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1231"
]
},
"annotation":{
"ncbigi":[
"499561850"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06310"
],
"refseq_old_locus_tag":[
"Synpcc7942_1231"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1372"
]
},
"annotation":{
"ncbigi":[
"499697273"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07020"
],
"refseq_old_locus_tag":[
"Synpcc7942_1372"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02420",
"name":"petN",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0475"
]
},
"annotation":{
"ncbigi":[
"499562573"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02420"
],
"refseq_name":[
"petN"
],
"refseq_old_locus_tag":[
"Synpcc7942_0475"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05015",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0977"
]
},
"annotation":{
"ncbigi":[
"499562096"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05015"
],
"refseq_old_locus_tag":[
"Synpcc7942_0977"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0978"
]
},
"annotation":{
"ncbigi":[
"499562095"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05020"
],
"refseq_old_locus_tag":[
"Synpcc7942_0978"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03055",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0596"
]
},
"annotation":{
"ncbigi":[
"499562456"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03055"
],
"refseq_old_locus_tag":[
"Synpcc7942_0596"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06315",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1232"
]
},
"annotation":{
"ncbigi":[
"499561849"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06315"
],
"refseq_old_locus_tag":[
"Synpcc7942_1232"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03015",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0588"
]
},
"annotation":{
"ncbigi":[
"499562464"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03015"
],
"refseq_old_locus_tag":[
"Synpcc7942_0588"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00540",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0106"
]
},
"annotation":{
"ncbigi":[
"499562927"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00540"
],
"refseq_old_locus_tag":[
"Synpcc7942_0106"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05635",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1099"
]
},
"annotation":{
"ncbigi":[
"499561979"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05635"
],
"refseq_old_locus_tag":[
"Synpcc7942_1099"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13015",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2561"
]
},
"annotation":{
"ncbigi":[
"499563076"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13015"
],
"refseq_old_locus_tag":[
"Synpcc7942_2561"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07765",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1519"
]
},
"annotation":{
"ncbigi":[
"499564031"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07765"
],
"refseq_old_locus_tag":[
"Synpcc7942_1519"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04180",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0808"
]
},
"annotation":{
"ncbigi":[
"499697004"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04180"
],
"refseq_old_locus_tag":[
"Synpcc7942_0808"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05170",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1007"
]
},
"annotation":{
"ncbigi":[
"499562067"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05170"
],
"refseq_old_locus_tag":[
"Synpcc7942_1007"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12725",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2508"
]
},
"annotation":{
"ncbigi":[
"499563125"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12725"
],
"refseq_old_locus_tag":[
"Synpcc7942_2508"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06825",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1335"
]
},
"annotation":{
"ncbigi":[
"499561750"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06825"
],
"refseq_old_locus_tag":[
"Synpcc7942_1335"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11515",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2266"
]
},
"annotation":{
"ncbigi":[
"499697648"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11515"
],
"refseq_old_locus_tag":[
"Synpcc7942_2266"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06275",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1225"
]
},
"annotation":{
"ncbigi":[
"499697191"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06275"
],
"refseq_old_locus_tag":[
"Synpcc7942_1225"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05900",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1151"
]
},
"annotation":{
"ncbigi":[
"499561928"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05900"
],
"refseq_old_locus_tag":[
"Synpcc7942_1151"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02075",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0407"
]
},
"annotation":{
"ncbigi":[
"499562637"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02075"
],
"refseq_old_locus_tag":[
"Synpcc7942_0407"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06760",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1322"
]
},
"annotation":{
"ncbigi":[
"499561762"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06760"
],
"refseq_old_locus_tag":[
"Synpcc7942_1322"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11475",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2258"
]
},
"annotation":{
"ncbigi":[
"499563367"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11475"
],
"refseq_old_locus_tag":[
"Synpcc7942_2258"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04735",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0920"
]
},
"annotation":{
"ncbigi":[
"499562151"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04735"
],
"refseq_old_locus_tag":[
"Synpcc7942_0920"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05140",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1002"
]
},
"annotation":{
"ncbigi":[
"499697090"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05140"
],
"refseq_old_locus_tag":[
"Synpcc7942_1002"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10390",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2048"
]
},
"annotation":{
"ncbigi":[
"499563572"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10390"
],
"refseq_old_locus_tag":[
"Synpcc7942_2048"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10115",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1995"
]
},
"annotation":{
"ncbigi":[
"499563628"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10115"
],
"refseq_old_locus_tag":[
"Synpcc7942_1995"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02720",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0535"
]
},
"annotation":{
"ncbigi":[
"499562515"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02720"
],
"refseq_old_locus_tag":[
"Synpcc7942_0535"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2047"
]
},
"annotation":{
"ncbigi":[
"499563573"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10385"
],
"refseq_old_locus_tag":[
"Synpcc7942_2047"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10395",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2049"
]
},
"annotation":{
"ncbigi":[
"499563571"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10395"
],
"refseq_old_locus_tag":[
"Synpcc7942_2049"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11730",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2308"
]
},
"annotation":{
"ncbigi":[
"499563321"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11730"
],
"refseq_old_locus_tag":[
"Synpcc7942_2308"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10380",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2046"
]
},
"annotation":{
"ncbigi":[
"499563574"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10380"
],
"refseq_old_locus_tag":[
"Synpcc7942_2046"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09705",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1912a"
]
},
"annotation":{
"ncbigi":[
"499563709"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09705"
],
"refseq_old_locus_tag":[
"Synpcc7942_1912a"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2497"
]
},
"annotation":{
"ncbigi":[
"499563136"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12670"
],
"refseq_old_locus_tag":[
"Synpcc7942_2497"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00310",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0062"
]
},
"annotation":{
"ncbigi":[
"499562969"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00310"
],
"refseq_old_locus_tag":[
"Synpcc7942_0062"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05555",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1082"
]
},
"annotation":{
"ncbigi":[
"908378142"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05555"
],
"refseq_old_locus_tag":[
"Synpcc7942_1082"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11905",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2343"
]
},
"annotation":{
"ncbigi":[
"499563287"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11905"
],
"refseq_old_locus_tag":[
"Synpcc7942_2343"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04780",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0929"
]
},
"annotation":{
"ncbigi":[
"499562142"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04780"
],
"refseq_old_locus_tag":[
"Synpcc7942_0929"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08155",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1597"
]
},
"annotation":{
"ncbigi":[
"499561584"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08155"
],
"refseq_old_locus_tag":[
"Synpcc7942_1597"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06400",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1249"
]
},
"annotation":{
"ncbigi":[
"499561832"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06400"
],
"refseq_old_locus_tag":[
"Synpcc7942_1249"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06405",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1250"
]
},
"annotation":{
"ncbigi":[
"499561831"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06405"
],
"refseq_old_locus_tag":[
"Synpcc7942_1250"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04030",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0777"
]
},
"annotation":{
"ncbigi":[
"499696987"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04030"
],
"refseq_old_locus_tag":[
"Synpcc7942_0777"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09540",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1881"
]
},
"annotation":{
"ncbigi":[
"499697495"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09540"
],
"refseq_old_locus_tag":[
"Synpcc7942_1881"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11900",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2342"
]
},
"annotation":{
"ncbigi":[
"499697681"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11900"
],
"refseq_old_locus_tag":[
"Synpcc7942_2342"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05135",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1001"
]
},
"annotation":{
"ncbigi":[
"748184873"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05135"
],
"refseq_old_locus_tag":[
"Synpcc7942_1001"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02850",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0560"
]
},
"annotation":{
"ncbigi":[
"499696889"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02850"
],
"refseq_old_locus_tag":[
"Synpcc7942_0560"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10460",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2062"
]
},
"annotation":{
"ncbigi":[
"499697562"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10460"
],
"refseq_old_locus_tag":[
"Synpcc7942_2062"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11895",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2341"
]
},
"annotation":{
"ncbigi":[
"499697680"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11895"
],
"refseq_old_locus_tag":[
"Synpcc7942_2341"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04850",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0943"
]
},
"annotation":{
"ncbigi":[
"499697066"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04850"
],
"refseq_old_locus_tag":[
"Synpcc7942_0943"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02195",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0430"
]
},
"annotation":{
"ncbigi":[
"499696842"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02195"
],
"refseq_old_locus_tag":[
"Synpcc7942_0430"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08360",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1639"
]
},
"annotation":{
"ncbigi":[
"499563973"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08360"
],
"refseq_old_locus_tag":[
"Synpcc7942_1639"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00090",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0017"
]
},
"annotation":{
"ncbigi":[
"499563007"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00090"
],
"refseq_old_locus_tag":[
"Synpcc7942_0017"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05575",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1086"
]
},
"annotation":{
"ncbigi":[
"499561992"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05575"
],
"refseq_old_locus_tag":[
"Synpcc7942_1086"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13305",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2612"
]
},
"annotation":{
"ncbigi":[
"499563025"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13305"
],
"refseq_old_locus_tag":[
"Synpcc7942_2612"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04925",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0958"
]
},
"annotation":{
"ncbigi":[
"499562113"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04925"
],
"refseq_old_locus_tag":[
"Synpcc7942_0958"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02260",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0442"
]
},
"annotation":{
"ncbigi":[
"499696848"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02260"
],
"refseq_old_locus_tag":[
"Synpcc7942_0442"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09055",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1782"
]
},
"annotation":{
"ncbigi":[
"499563838"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09055"
],
"refseq_old_locus_tag":[
"Synpcc7942_1782"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01045",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0206"
]
},
"annotation":{
"ncbigi":[
"499562834"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01045"
],
"refseq_old_locus_tag":[
"Synpcc7942_0206"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11585",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2279"
]
},
"annotation":{
"ncbigi":[
"499697651"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11585"
],
"refseq_old_locus_tag":[
"Synpcc7942_2279"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10835",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2136"
]
},
"annotation":{
"ncbigi":[
"499697600"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10835"
],
"refseq_old_locus_tag":[
"Synpcc7942_2136"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01335",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0262"
]
},
"annotation":{
"ncbigi":[
"499562780"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01335"
],
"refseq_old_locus_tag":[
"Synpcc7942_0262"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0775"
]
},
"annotation":{
"ncbigi":[
"499562290"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04020"
],
"refseq_old_locus_tag":[
"Synpcc7942_0775"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12715",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2506"
]
},
"annotation":{
"ncbigi":[
"499563127"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12715"
],
"refseq_old_locus_tag":[
"Synpcc7942_2506"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12990",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2556"
]
},
"annotation":{
"ncbigi":[
"499563081"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12990"
],
"refseq_old_locus_tag":[
"Synpcc7942_2556"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00495",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0097"
]
},
"annotation":{
"ncbigi":[
"499696704"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00495"
],
"refseq_old_locus_tag":[
"Synpcc7942_0097"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12985",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2555"
]
},
"annotation":{
"refseq_locus_tag":[
"SYNPCC7942_RS12985"
],
"refseq_old_locus_tag":[
"Synpcc7942_2555"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03035",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0592"
]
},
"annotation":{
"ncbigi":[
"499696901"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03035"
],
"refseq_old_locus_tag":[
"Synpcc7942_0592"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08000",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1566"
]
},
"annotation":{
"ncbigi":[
"499697352"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08000"
],
"refseq_old_locus_tag":[
"Synpcc7942_1566"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01420",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0279"
]
},
"annotation":{
"ncbigi":[
"499696784"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01420"
],
"refseq_old_locus_tag":[
"Synpcc7942_0279"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01630",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0320"
]
},
"annotation":{
"ncbigi":[
"499562722"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01630"
],
"refseq_old_locus_tag":[
"Synpcc7942_0320"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08945",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1760"
]
},
"annotation":{
"ncbigi":[
"499697442"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08945"
],
"refseq_old_locus_tag":[
"Synpcc7942_1760"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12785",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2518"
]
},
"annotation":{
"ncbigi":[
"499697764"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12785"
],
"refseq_old_locus_tag":[
"Synpcc7942_2518"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12930",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2545"
]
},
"annotation":{
"ncbigi":[
"499563092"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12930"
],
"refseq_old_locus_tag":[
"Synpcc7942_2545"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04920",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0957"
]
},
"annotation":{
"ncbigi":[
"499562114"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04920"
],
"refseq_old_locus_tag":[
"Synpcc7942_0957"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05145",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1003"
]
},
"annotation":{
"ncbigi":[
"499697091"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05145"
],
"refseq_old_locus_tag":[
"Synpcc7942_1003"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04760",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0925"
]
},
"annotation":{
"ncbigi":[
"499562146"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04760"
],
"refseq_old_locus_tag":[
"Synpcc7942_0925"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02040",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0400"
]
},
"annotation":{
"ncbigi":[
"499562644"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02040"
],
"refseq_old_locus_tag":[
"Synpcc7942_0400"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07095",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1386"
]
},
"annotation":{
"ncbigi":[
"499697280"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07095"
],
"refseq_old_locus_tag":[
"Synpcc7942_1386"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05250",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1021"
]
},
"annotation":{
"ncbigi":[
"499562054"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05250"
],
"refseq_old_locus_tag":[
"Synpcc7942_1021"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06300",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1229"
]
},
"annotation":{
"ncbigi":[
"499561852"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06300"
],
"refseq_old_locus_tag":[
"Synpcc7942_1229"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10540",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2079"
]
},
"annotation":{
"ncbigi":[
"499697572"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10540"
],
"refseq_old_locus_tag":[
"Synpcc7942_2079"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_2454",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2454"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07445",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1455"
]
},
"annotation":{
"ncbigi":[
"499561632"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07445"
],
"refseq_old_locus_tag":[
"Synpcc7942_1455"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01345",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0264"
]
},
"annotation":{
"ncbigi":[
"499562778"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01345"
],
"refseq_old_locus_tag":[
"Synpcc7942_0264"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2296"
]
},
"annotation":{
"ncbigi":[
"499697660"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11670"
],
"refseq_old_locus_tag":[
"Synpcc7942_2296"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00860",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0169"
]
},
"annotation":{
"ncbigi":[
"499562867"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00860"
],
"refseq_old_locus_tag":[
"Synpcc7942_0169"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04605",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0894"
]
},
"annotation":{
"ncbigi":[
"499562175"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04605"
],
"refseq_old_locus_tag":[
"Synpcc7942_0894"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01465",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0288"
]
},
"annotation":{
"ncbigi":[
"499562753"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01465"
],
"refseq_old_locus_tag":[
"Synpcc7942_0288"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04440",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0861"
]
},
"annotation":{
"ncbigi":[
"499562208"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04440"
],
"refseq_old_locus_tag":[
"Synpcc7942_0861"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04785",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0930"
]
},
"annotation":{
"ncbigi":[
"499697059"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04785"
],
"refseq_old_locus_tag":[
"Synpcc7942_0930"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10295",
"name":"pgi",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2029"
]
},
"annotation":{
"ncbigi":[
"499563593"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10295"
],
"refseq_name":[
"pgi"
],
"refseq_old_locus_tag":[
"Synpcc7942_2029"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09185",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1808"
]
},
"annotation":{
"ncbigi":[
"499697464"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09185"
],
"refseq_old_locus_tag":[
"Synpcc7942_1808"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01270",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0249"
]
},
"annotation":{
"ncbigi":[
"499562793"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01270"
],
"refseq_old_locus_tag":[
"Synpcc7942_0249"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01880",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0369"
]
},
"annotation":{
"ncbigi":[
"499696815"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01880"
],
"refseq_old_locus_tag":[
"Synpcc7942_0369"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03290",
"name":"sdhA",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0641"
]
},
"annotation":{
"ncbigi":[
"499696924"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03290"
],
"refseq_name":[
"sdhA"
],
"refseq_old_locus_tag":[
"Synpcc7942_0641"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01600",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0314"
]
},
"annotation":{
"ncbigi":[
"499562728"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01600"
],
"refseq_old_locus_tag":[
"Synpcc7942_0314"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07835",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1533"
]
},
"annotation":{
"ncbigi":[
"499564046"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07835"
],
"refseq_old_locus_tag":[
"Synpcc7942_1533"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09780",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1927"
]
},
"annotation":{
"ncbigi":[
"499563694"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09780"
],
"refseq_old_locus_tag":[
"Synpcc7942_1927"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09580",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1889"
]
},
"annotation":{
"ncbigi":[
"499563733"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09580"
],
"refseq_old_locus_tag":[
"Synpcc7942_1889"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05570",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1085"
]
},
"annotation":{
"ncbigi":[
"499561993"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05570"
],
"refseq_old_locus_tag":[
"Synpcc7942_1085"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07325",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1432"
]
},
"annotation":{
"ncbigi":[
"499697297"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07325"
],
"refseq_old_locus_tag":[
"Synpcc7942_1432"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07735",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1513"
]
},
"annotation":{
"ncbigi":[
"499564025"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07735"
],
"refseq_old_locus_tag":[
"Synpcc7942_1513"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06990",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1366"
]
},
"annotation":{
"ncbigi":[
"499561720"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06990"
],
"refseq_old_locus_tag":[
"Synpcc7942_1366"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11395",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2244"
]
},
"annotation":{
"ncbigi":[
"499563381"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11395"
],
"refseq_old_locus_tag":[
"Synpcc7942_2244"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03505",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0684"
]
},
"annotation":{
"ncbigi":[
"499562374"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03505"
],
"refseq_old_locus_tag":[
"Synpcc7942_0684"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00195",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0039"
]
},
"annotation":{
"ncbigi":[
"499696679"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00195"
],
"refseq_old_locus_tag":[
"Synpcc7942_0039"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12160",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2393"
]
},
"annotation":{
"ncbigi":[
"499563239"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12160"
],
"refseq_old_locus_tag":[
"Synpcc7942_2393"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01040",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0205"
]
},
"annotation":{
"ncbigi":[
"499696758"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01040"
],
"refseq_old_locus_tag":[
"Synpcc7942_0205"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12520",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2463"
]
},
"annotation":{
"ncbigi":[
"499697742"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12520"
],
"refseq_old_locus_tag":[
"Synpcc7942_2463"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07645",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1496"
]
},
"annotation":{
"ncbigi":[
"499564009"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07645"
],
"refseq_old_locus_tag":[
"Synpcc7942_1496"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1858"
]
},
"annotation":{
"ncbigi":[
"499563763"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09425"
],
"refseq_old_locus_tag":[
"Synpcc7942_1858"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09440",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1861"
]
},
"annotation":{
"ncbigi":[
"499563760"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09440"
],
"refseq_old_locus_tag":[
"Synpcc7942_1861"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05420",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1057"
]
},
"annotation":{
"ncbigi":[
"499697112"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05420"
],
"refseq_old_locus_tag":[
"Synpcc7942_1057"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04215",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0815"
]
},
"annotation":{
"ncbigi":[
"499562253"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04215"
],
"refseq_old_locus_tag":[
"Synpcc7942_0815"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02485",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0488"
]
},
"annotation":{
"ncbigi":[
"499562560"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02485"
],
"refseq_old_locus_tag":[
"Synpcc7942_0488"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02475",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0486"
]
},
"annotation":{
"ncbigi":[
"499562562"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02475"
],
"refseq_old_locus_tag":[
"Synpcc7942_0486"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11675",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2297"
]
},
"annotation":{
"ncbigi":[
"499697661"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11675"
],
"refseq_old_locus_tag":[
"Synpcc7942_2297"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04655",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0903"
]
},
"annotation":{
"ncbigi":[
"499562166"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04655"
],
"refseq_old_locus_tag":[
"Synpcc7942_0903"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06115",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1194"
]
},
"annotation":{
"ncbigi":[
"748184854"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06115"
],
"refseq_old_locus_tag":[
"Synpcc7942_1194"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06130",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1197"
]
},
"annotation":{
"ncbigi":[
"499561883"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06130"
],
"refseq_old_locus_tag":[
"Synpcc7942_1197"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09965",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1964"
]
},
"annotation":{
"ncbigi":[
"748184498"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09965"
],
"refseq_old_locus_tag":[
"Synpcc7942_1964"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05325",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1037"
]
},
"annotation":{
"ncbigi":[
"908378141"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05325"
],
"refseq_old_locus_tag":[
"Synpcc7942_1037"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11065",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2177"
]
},
"annotation":{
"ncbigi":[
"499563445"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11065"
],
"refseq_old_locus_tag":[
"Synpcc7942_2177"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10595",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2090"
]
},
"annotation":{
"ncbigi":[
"499697577"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10595"
],
"refseq_old_locus_tag":[
"Synpcc7942_2090"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09600",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1893"
]
},
"annotation":{
"ncbigi":[
"499697497"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09600"
],
"refseq_old_locus_tag":[
"Synpcc7942_1893"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09605",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1894"
]
},
"annotation":{
"ncbigi":[
"499697498"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09605"
],
"refseq_old_locus_tag":[
"Synpcc7942_1894"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04820",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0937"
]
},
"annotation":{
"ncbigi":[
"499562134"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04820"
],
"refseq_old_locus_tag":[
"Synpcc7942_0937"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2243"
]
},
"annotation":{
"ncbigi":[
"499697635"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11385"
],
"refseq_old_locus_tag":[
"Synpcc7942_2243"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11510",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2265"
]
},
"annotation":{
"ncbigi":[
"499563360"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11510"
],
"refseq_old_locus_tag":[
"Synpcc7942_2265"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08865",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1742"
]
},
"annotation":{
"ncbigi":[
"499697432"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08865"
],
"refseq_old_locus_tag":[
"Synpcc7942_1742"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07180",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1403"
]
},
"annotation":{
"ncbigi":[
"499697286"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07180"
],
"refseq_old_locus_tag":[
"Synpcc7942_1403"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09810",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1933"
]
},
"annotation":{
"ncbigi":[
"499563688"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09810"
],
"refseq_old_locus_tag":[
"Synpcc7942_1933"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02255",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0441"
]
},
"annotation":{
"ncbigi":[
"499562605"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02255"
],
"refseq_old_locus_tag":[
"Synpcc7942_0441"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0396"
]
},
"annotation":{
"ncbigi":[
"499696830"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02020"
],
"refseq_old_locus_tag":[
"Synpcc7942_0396"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02940",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0578"
]
},
"annotation":{
"ncbigi":[
"499562474"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02940"
],
"refseq_old_locus_tag":[
"Synpcc7942_0578"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02570",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0506"
]
},
"annotation":{
"ncbigi":[
"1105096531"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02570"
],
"refseq_old_locus_tag":[
"Synpcc7942_0506"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00470",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0093"
]
},
"annotation":{
"ncbigi":[
"499696701"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00470"
],
"refseq_old_locus_tag":[
"Synpcc7942_0093"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06100",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1191"
]
},
"annotation":{
"ncbigi":[
"499697174"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06100"
],
"refseq_old_locus_tag":[
"Synpcc7942_1191"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12945",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2548"
]
},
"annotation":{
"ncbigi":[
"499563089"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12945"
],
"refseq_old_locus_tag":[
"Synpcc7942_2548"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12135",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2388"
]
},
"annotation":{
"ncbigi":[
"499563244"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12135"
],
"refseq_old_locus_tag":[
"Synpcc7942_2388"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09625",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1898"
]
},
"annotation":{
"ncbigi":[
"499563724"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09625"
],
"refseq_old_locus_tag":[
"Synpcc7942_1898"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1246"
]
},
"annotation":{
"ncbigi":[
"499697200"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06385"
],
"refseq_old_locus_tag":[
"Synpcc7942_1246"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00965",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0190"
]
},
"annotation":{
"ncbigi":[
"499562850"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00965"
],
"refseq_old_locus_tag":[
"Synpcc7942_0190"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07730",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1512"
]
},
"annotation":{
"ncbigi":[
"499697327"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07730"
],
"refseq_old_locus_tag":[
"Synpcc7942_1512"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03380",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0660"
]
},
"annotation":{
"ncbigi":[
"748184715"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03380"
],
"refseq_old_locus_tag":[
"Synpcc7942_0660"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06870",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1344"
]
},
"annotation":{
"ncbigi":[
"499561740"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06870"
],
"refseq_old_locus_tag":[
"Synpcc7942_1344"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06880",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1346"
]
},
"annotation":{
"ncbigi":[
"499561738"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06880"
],
"refseq_old_locus_tag":[
"Synpcc7942_1346"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08870",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1743"
]
},
"annotation":{
"ncbigi":[
"499563875"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08870"
],
"refseq_old_locus_tag":[
"Synpcc7942_1743"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08285",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1624"
]
},
"annotation":{
"ncbigi":[
"499697382"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08285"
],
"refseq_old_locus_tag":[
"Synpcc7942_1624"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1850"
]
},
"annotation":{
"ncbigi":[
"499563771"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09385"
],
"refseq_old_locus_tag":[
"Synpcc7942_1850"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12690",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2501"
]
},
"annotation":{
"ncbigi":[
"499563132"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12690"
],
"refseq_old_locus_tag":[
"Synpcc7942_2501"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07455",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1457"
]
},
"annotation":{
"ncbigi":[
"499561630"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07455"
],
"refseq_old_locus_tag":[
"Synpcc7942_1457"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03125",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0609"
]
},
"annotation":{
"refseq_locus_tag":[
"SYNPCC7942_RS03125"
],
"refseq_old_locus_tag":[
"Synpcc7942_0609"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10435",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2057"
]
},
"annotation":{
"ncbigi":[
"499563563"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10435"
],
"refseq_old_locus_tag":[
"Synpcc7942_2057"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10600",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2091"
]
},
"annotation":{
"ncbigi":[
"499697578"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10600"
],
"refseq_old_locus_tag":[
"Synpcc7942_2091"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10605",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2092"
]
},
"annotation":{
"ncbigi":[
"499697579"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10605"
],
"refseq_old_locus_tag":[
"Synpcc7942_2092"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_0034",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0034"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07440",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1454"
]
},
"annotation":{
"ncbigi":[
"499561633"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07440"
],
"refseq_old_locus_tag":[
"Synpcc7942_1454"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00360",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0073"
]
},
"annotation":{
"ncbigi":[
"499562960"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00360"
],
"refseq_old_locus_tag":[
"Synpcc7942_0073"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11870",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2335"
]
},
"annotation":{
"ncbigi":[
"499697675"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11870"
],
"refseq_old_locus_tag":[
"Synpcc7942_2335"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10050",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1982"
]
},
"annotation":{
"ncbigi":[
"499563641"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10050"
],
"refseq_old_locus_tag":[
"Synpcc7942_1982"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09370",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1847"
]
},
"annotation":{
"ncbigi":[
"499563774"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09370"
],
"refseq_old_locus_tag":[
"Synpcc7942_1847"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12995",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2557"
]
},
"annotation":{
"ncbigi":[
"499697783"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12995"
],
"refseq_old_locus_tag":[
"Synpcc7942_2557"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01605",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0315"
]
},
"annotation":{
"ncbigi":[
"499696798"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01605"
],
"refseq_old_locus_tag":[
"Synpcc7942_0315"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02320",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0454"
]
},
"annotation":{
"ncbigi":[
"499562592"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02320"
],
"refseq_old_locus_tag":[
"Synpcc7942_0454"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07240",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1415"
]
},
"annotation":{
"ncbigi":[
"499561671"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07240"
],
"refseq_old_locus_tag":[
"Synpcc7942_1415"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13830",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2257"
]
},
"annotation":{
"ncbigi":[
"499697644"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13830"
],
"refseq_old_locus_tag":[
"Synpcc7942_2257"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06735",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1317"
]
},
"annotation":{
"ncbigi":[
"499697247"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06735"
],
"refseq_old_locus_tag":[
"Synpcc7942_1317"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10055",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1983"
]
},
"annotation":{
"ncbigi":[
"499697532"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10055"
],
"refseq_old_locus_tag":[
"Synpcc7942_1983"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13085",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2575"
]
},
"annotation":{
"ncbigi":[
"499563062"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13085"
],
"refseq_old_locus_tag":[
"Synpcc7942_2575"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12070",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2375"
]
},
"annotation":{
"ncbigi":[
"499563257"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12070"
],
"refseq_old_locus_tag":[
"Synpcc7942_2375"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13075",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2573"
]
},
"annotation":{
"ncbigi":[
"499563064"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13075"
],
"refseq_old_locus_tag":[
"Synpcc7942_2573"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1976"
]
},
"annotation":{
"ncbigi":[
"499563647"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10020"
],
"refseq_old_locus_tag":[
"Synpcc7942_1976"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01245",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0244"
]
},
"annotation":{
"ncbigi":[
"499562798"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01245"
],
"refseq_old_locus_tag":[
"Synpcc7942_0244"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06730",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1316"
]
},
"annotation":{
"ncbigi":[
"499697246"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06730"
],
"refseq_old_locus_tag":[
"Synpcc7942_1316"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05115",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0996"
]
},
"annotation":{
"ncbigi":[
"499562077"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05115"
],
"refseq_old_locus_tag":[
"Synpcc7942_0996"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06055",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1182"
]
},
"annotation":{
"ncbigi":[
"499697169"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06055"
],
"refseq_old_locus_tag":[
"Synpcc7942_1182"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06865",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1343"
]
},
"annotation":{
"ncbigi":[
"499561741"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06865"
],
"refseq_old_locus_tag":[
"Synpcc7942_1343"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10005",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1973"
]
},
"annotation":{
"ncbigi":[
"499563650"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10005"
],
"refseq_old_locus_tag":[
"Synpcc7942_1973"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10025",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1977"
]
},
"annotation":{
"ncbigi":[
"499697528"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10025"
],
"refseq_old_locus_tag":[
"Synpcc7942_1977"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08205",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1608"
]
},
"annotation":{
"ncbigi":[
"499697377"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08205"
],
"refseq_old_locus_tag":[
"Synpcc7942_1608"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06050",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1181"
]
},
"annotation":{
"ncbigi":[
"499561898"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06050"
],
"refseq_old_locus_tag":[
"Synpcc7942_1181"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06740",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1318"
]
},
"annotation":{
"ncbigi":[
"499561766"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06740"
],
"refseq_old_locus_tag":[
"Synpcc7942_1318"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13080",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2574"
]
},
"annotation":{
"ncbigi":[
"499697787"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13080"
],
"refseq_old_locus_tag":[
"Synpcc7942_2574"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10185",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2008"
]
},
"annotation":{
"ncbigi":[
"499697540"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10185"
],
"refseq_old_locus_tag":[
"Synpcc7942_2008"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02045",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0401"
]
},
"annotation":{
"ncbigi":[
"499562643"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02045"
],
"refseq_old_locus_tag":[
"Synpcc7942_0401"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1907"
]
},
"annotation":{
"ncbigi":[
"499563715"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09670"
],
"refseq_old_locus_tag":[
"Synpcc7942_1907"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06045",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1180"
]
},
"annotation":{
"ncbigi":[
"748184857"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06045"
],
"refseq_old_locus_tag":[
"Synpcc7942_1180"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03140",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0612"
]
},
"annotation":{
"ncbigi":[
"499696913"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03140"
],
"refseq_old_locus_tag":[
"Synpcc7942_0612"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04025",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0776"
]
},
"annotation":{
"ncbigi":[
"499562289"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04025"
],
"refseq_old_locus_tag":[
"Synpcc7942_0776"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11345",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2234"
]
},
"annotation":{
"ncbigi":[
"499563391"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11345"
],
"refseq_old_locus_tag":[
"Synpcc7942_2234"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12805",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2522"
]
},
"annotation":{
"ncbigi":[
"499697768"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12805"
],
"refseq_old_locus_tag":[
"Synpcc7942_2522"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01415",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0278"
]
},
"annotation":{
"ncbigi":[
"499562764"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01415"
],
"refseq_old_locus_tag":[
"Synpcc7942_0278"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13045",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2567"
]
},
"annotation":{
"ncbigi":[
"499563070"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13045"
],
"refseq_old_locus_tag":[
"Synpcc7942_2567"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10060",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1984"
]
},
"annotation":{
"ncbigi":[
"499563639"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10060"
],
"refseq_old_locus_tag":[
"Synpcc7942_1984"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12100",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2381"
]
},
"annotation":{
"ncbigi":[
"499563251"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12100"
],
"refseq_old_locus_tag":[
"Synpcc7942_2381"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02935",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0576"
]
},
"annotation":{
"ncbigi":[
"499696896"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02935"
],
"refseq_old_locus_tag":[
"Synpcc7942_0576"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1443"
]
},
"annotation":{
"ncbigi":[
"499561643"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07385"
],
"refseq_old_locus_tag":[
"Synpcc7942_1443"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07330",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1433"
]
},
"annotation":{
"ncbigi":[
"499561654"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07330"
],
"refseq_old_locus_tag":[
"Synpcc7942_1433"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07360",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1439"
]
},
"annotation":{
"ncbigi":[
"499561647"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07360"
],
"refseq_old_locus_tag":[
"Synpcc7942_1439"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12365",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2434"
]
},
"annotation":{
"ncbigi":[
"499563199"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12365"
],
"refseq_old_locus_tag":[
"Synpcc7942_2434"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01575",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0309"
]
},
"annotation":{
"ncbigi":[
"499696796"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01575"
],
"refseq_old_locus_tag":[
"Synpcc7942_0309"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00705",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0139"
]
},
"annotation":{
"ncbigi":[
"499696727"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00705"
],
"refseq_old_locus_tag":[
"Synpcc7942_0139"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_0413",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0413"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07690",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1505"
]
},
"annotation":{
"ncbigi":[
"499697324"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07690"
],
"refseq_old_locus_tag":[
"Synpcc7942_1505"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01580",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0310"
]
},
"annotation":{
"ncbigi":[
"499562732"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01580"
],
"refseq_old_locus_tag":[
"Synpcc7942_0310"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09375",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1848"
]
},
"annotation":{
"ncbigi":[
"499563773"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09375"
],
"refseq_old_locus_tag":[
"Synpcc7942_1848"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06950",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1359"
]
},
"annotation":{
"ncbigi":[
"499561726"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06950"
],
"refseq_old_locus_tag":[
"Synpcc7942_1359"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06875",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1345"
]
},
"annotation":{
"ncbigi":[
"499697262"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06875"
],
"refseq_old_locus_tag":[
"Synpcc7942_1345"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01180",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0232"
]
},
"annotation":{
"ncbigi":[
"499562810"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01180"
],
"refseq_old_locus_tag":[
"Synpcc7942_0232"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05290",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1030"
]
},
"annotation":{
"ncbigi":[
"499697100"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05290"
],
"refseq_old_locus_tag":[
"Synpcc7942_1030"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07540",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1475"
]
},
"annotation":{
"ncbigi":[
"499563988"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07540"
],
"refseq_old_locus_tag":[
"Synpcc7942_1475"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13375",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_B2663"
]
},
"annotation":{
"refseq_locus_tag":[
"SYNPCC7942_RS13375"
],
"refseq_old_locus_tag":[
"Synpcc7942_B2663"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13245",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2600"
]
},
"annotation":{
"ncbigi":[
"499563037"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13245"
],
"refseq_old_locus_tag":[
"Synpcc7942_2600"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03100",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0604"
]
},
"annotation":{
"ncbigi":[
"499696906"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03100"
],
"refseq_old_locus_tag":[
"Synpcc7942_0604"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02245",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0439"
]
},
"annotation":{
"ncbigi":[
"499562607"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02245"
],
"refseq_old_locus_tag":[
"Synpcc7942_0439"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01005",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0198"
]
},
"annotation":{
"ncbigi":[
"499562842"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01005"
],
"refseq_old_locus_tag":[
"Synpcc7942_0198"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00515",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0101"
]
},
"annotation":{
"ncbigi":[
"499696706"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00515"
],
"refseq_old_locus_tag":[
"Synpcc7942_0101"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08860",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1741"
]
},
"annotation":{
"ncbigi":[
"499563877"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08860"
],
"refseq_old_locus_tag":[
"Synpcc7942_1741"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04960",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0965"
]
},
"annotation":{
"ncbigi":[
"499562106"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04960"
],
"refseq_old_locus_tag":[
"Synpcc7942_0965"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00880",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0173"
]
},
"annotation":{
"ncbigi":[
"499562865"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00880"
],
"refseq_old_locus_tag":[
"Synpcc7942_0173"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09635",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1900"
]
},
"annotation":{
"ncbigi":[
"499563722"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09635"
],
"refseq_old_locus_tag":[
"Synpcc7942_1900"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01890",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0371"
]
},
"annotation":{
"ncbigi":[
"499696816"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01890"
],
"refseq_old_locus_tag":[
"Synpcc7942_0371"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10895",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2145"
]
},
"annotation":{
"ncbigi":[
"499697604"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10895"
],
"refseq_old_locus_tag":[
"Synpcc7942_2145"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07415",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1449"
]
},
"annotation":{
"ncbigi":[
"499561638"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07415"
],
"refseq_old_locus_tag":[
"Synpcc7942_1449"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05720",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1116"
]
},
"annotation":{
"ncbigi":[
"499697134"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05720"
],
"refseq_old_locus_tag":[
"Synpcc7942_1116"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09290",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1831"
]
},
"annotation":{
"ncbigi":[
"499563790"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09290"
],
"refseq_old_locus_tag":[
"Synpcc7942_1831"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12700",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2503"
]
},
"annotation":{
"ncbigi":[
"499697757"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12700"
],
"refseq_old_locus_tag":[
"Synpcc7942_2503"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00460",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0091"
]
},
"annotation":{
"ncbigi":[
"499562942"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00460"
],
"refseq_old_locus_tag":[
"Synpcc7942_0091"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02490",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0489"
]
},
"annotation":{
"ncbigi":[
"499562559"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02490"
],
"refseq_old_locus_tag":[
"Synpcc7942_0489"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08210",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1609"
]
},
"annotation":{
"ncbigi":[
"499697378"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08210"
],
"refseq_old_locus_tag":[
"Synpcc7942_1609"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07305",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1428"
]
},
"annotation":{
"ncbigi":[
"499561659"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07305"
],
"refseq_old_locus_tag":[
"Synpcc7942_1428"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12295",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2420"
]
},
"annotation":{
"ncbigi":[
"499563213"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12295"
],
"refseq_old_locus_tag":[
"Synpcc7942_2420"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04750",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0923"
]
},
"annotation":{
"ncbigi":[
"499562148"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04750"
],
"refseq_old_locus_tag":[
"Synpcc7942_0923"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08720",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1714"
]
},
"annotation":{
"ncbigi":[
"499697420"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08720"
],
"refseq_old_locus_tag":[
"Synpcc7942_1714"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04855",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0944"
]
},
"annotation":{
"ncbigi":[
"499562127"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04855"
],
"refseq_old_locus_tag":[
"Synpcc7942_0944"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13250",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2601"
]
},
"annotation":{
"ncbigi":[
"499697795"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13250"
],
"refseq_old_locus_tag":[
"Synpcc7942_2601"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05625",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1096"
]
},
"annotation":{
"ncbigi":[
"499697127"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05625"
],
"refseq_old_locus_tag":[
"Synpcc7942_1096"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02690",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0529"
]
},
"annotation":{
"ncbigi":[
"499562521"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02690"
],
"refseq_old_locus_tag":[
"Synpcc7942_0529"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13875",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0990"
]
},
"annotation":{
"ncbigi":[
"499562083"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13875"
],
"refseq_old_locus_tag":[
"Synpcc7942_0990"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01475",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0290"
]
},
"annotation":{
"ncbigi":[
"499696787"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01475"
],
"refseq_old_locus_tag":[
"Synpcc7942_0290"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10880",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2143"
]
},
"annotation":{
"ncbigi":[
"499563475"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10880"
],
"refseq_old_locus_tag":[
"Synpcc7942_2143"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12115",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2384"
]
},
"annotation":{
"ncbigi":[
"499697703"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12115"
],
"refseq_old_locus_tag":[
"Synpcc7942_2384"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02095",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0411"
]
},
"annotation":{
"ncbigi":[
"499562634"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02095"
],
"refseq_old_locus_tag":[
"Synpcc7942_0411"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03655",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0713"
]
},
"annotation":{
"ncbigi":[
"499562346"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03655"
],
"refseq_old_locus_tag":[
"Synpcc7942_0713"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06695",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1309"
]
},
"annotation":{
"ncbigi":[
"1105096543"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06695"
],
"refseq_old_locus_tag":[
"Synpcc7942_1309"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12000",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2362"
]
},
"annotation":{
"ncbigi":[
"499697692"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12000"
],
"refseq_old_locus_tag":[
"Synpcc7942_2362"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02455",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0482"
]
},
"annotation":{
"ncbigi":[
"499562566"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02455"
],
"refseq_old_locus_tag":[
"Synpcc7942_0482"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04400",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0853"
]
},
"annotation":{
"ncbigi":[
"499562216"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04400"
],
"refseq_old_locus_tag":[
"Synpcc7942_0853"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10140",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2000"
]
},
"annotation":{
"ncbigi":[
"499697536"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10140"
],
"refseq_old_locus_tag":[
"Synpcc7942_2000"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07340",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1435"
]
},
"annotation":{
"ncbigi":[
"499561652"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07340"
],
"refseq_old_locus_tag":[
"Synpcc7942_1435"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06500",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1269"
]
},
"annotation":{
"ncbigi":[
"499697214"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06500"
],
"refseq_old_locus_tag":[
"Synpcc7942_1269"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0280"
]
},
"annotation":{
"ncbigi":[
"499696785"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01425"
],
"refseq_old_locus_tag":[
"Synpcc7942_0280"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01305",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0256"
]
},
"annotation":{
"ncbigi":[
"748184753"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01305"
],
"refseq_old_locus_tag":[
"Synpcc7942_0256"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00635",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0125"
]
},
"annotation":{
"ncbigi":[
"499562908"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00635"
],
"refseq_old_locus_tag":[
"Synpcc7942_0125"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_1971",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1971"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13055",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2569"
]
},
"annotation":{
"ncbigi":[
"499563068"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13055"
],
"refseq_old_locus_tag":[
"Synpcc7942_2569"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03695",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0717"
]
},
"annotation":{
"ncbigi":[
"499562342"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03695"
],
"refseq_old_locus_tag":[
"Synpcc7942_0717"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04585",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0890"
]
},
"annotation":{
"ncbigi":[
"499697044"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04585"
],
"refseq_old_locus_tag":[
"Synpcc7942_0890"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11160",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2197"
]
},
"annotation":{
"ncbigi":[
"499697627"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11160"
],
"refseq_old_locus_tag":[
"Synpcc7942_2197"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00535",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0105"
]
},
"annotation":{
"ncbigi":[
"499696709"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00535"
],
"refseq_old_locus_tag":[
"Synpcc7942_0105"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00045",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0009"
]
},
"annotation":{
"ncbigi":[
"499563015"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00045"
],
"refseq_old_locus_tag":[
"Synpcc7942_0009"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02560",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0504"
]
},
"annotation":{
"ncbigi":[
"499562545"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02560"
],
"refseq_old_locus_tag":[
"Synpcc7942_0504"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10535",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2078"
]
},
"annotation":{
"ncbigi":[
"499697571"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10535"
],
"refseq_old_locus_tag":[
"Synpcc7942_2078"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10650",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2101"
]
},
"annotation":{
"ncbigi":[
"499563519"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10650"
],
"refseq_old_locus_tag":[
"Synpcc7942_2101"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10975",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2160"
]
},
"annotation":{
"ncbigi":[
"499697612"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10975"
],
"refseq_old_locus_tag":[
"Synpcc7942_2160"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08500",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1667"
]
},
"annotation":{
"ncbigi":[
"499563949"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08500"
],
"refseq_old_locus_tag":[
"Synpcc7942_1667"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10635",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2098"
]
},
"annotation":{
"ncbigi":[
"499563522"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10635"
],
"refseq_old_locus_tag":[
"Synpcc7942_2098"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06910",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1352"
]
},
"annotation":{
"ncbigi":[
"499561734"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06910"
],
"refseq_old_locus_tag":[
"Synpcc7942_1352"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10545",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2080"
]
},
"annotation":{
"ncbigi":[
"499563540"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10545"
],
"refseq_old_locus_tag":[
"Synpcc7942_2080"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11705",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2303"
]
},
"annotation":{
"ncbigi":[
"499697663"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11705"
],
"refseq_old_locus_tag":[
"Synpcc7942_2303"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00290",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0058"
]
},
"annotation":{
"ncbigi":[
"499562971"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00290"
],
"refseq_old_locus_tag":[
"Synpcc7942_0058"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03645",
"name":"carB",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0711"
]
},
"annotation":{
"ncbigi":[
"499562348"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03645"
],
"refseq_name":[
"carB"
],
"refseq_old_locus_tag":[
"Synpcc7942_0711"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10760",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2122"
]
},
"annotation":{
"ncbigi":[
"499697593"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10760"
],
"refseq_old_locus_tag":[
"Synpcc7942_2122"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04355",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0842"
]
},
"annotation":{
"ncbigi":[
"499697025"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04355"
],
"refseq_old_locus_tag":[
"Synpcc7942_0842"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05815",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1136"
]
},
"annotation":{
"ncbigi":[
"499697143"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05815"
],
"refseq_old_locus_tag":[
"Synpcc7942_1136"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06095",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1190"
]
},
"annotation":{
"ncbigi":[
"499697173"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06095"
],
"refseq_old_locus_tag":[
"Synpcc7942_1190"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09195",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1810"
]
},
"annotation":{
"ncbigi":[
"499697466"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09195"
],
"refseq_old_locus_tag":[
"Synpcc7942_1810"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04015",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0774"
]
},
"annotation":{
"ncbigi":[
"499562291"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04015"
],
"refseq_old_locus_tag":[
"Synpcc7942_0774"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09190",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1809"
]
},
"annotation":{
"ncbigi":[
"499697465"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09190"
],
"refseq_old_locus_tag":[
"Synpcc7942_1809"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12540",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2467"
]
},
"annotation":{
"ncbigi":[
"499563164"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12540"
],
"refseq_old_locus_tag":[
"Synpcc7942_2467"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10440",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2058"
]
},
"annotation":{
"ncbigi":[
"499697560"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10440"
],
"refseq_old_locus_tag":[
"Synpcc7942_2058"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11120",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2188"
]
},
"annotation":{
"ncbigi":[
"499563435"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11120"
],
"refseq_old_locus_tag":[
"Synpcc7942_2188"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13200",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2592"
]
},
"annotation":{
"ncbigi":[
"499697791"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13200"
],
"refseq_old_locus_tag":[
"Synpcc7942_2592"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12830",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2527"
]
},
"annotation":{
"ncbigi":[
"499563109"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12830"
],
"refseq_old_locus_tag":[
"Synpcc7942_2527"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02730",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0537"
]
},
"annotation":{
"ncbigi":[
"499562513"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02730"
],
"refseq_old_locus_tag":[
"Synpcc7942_0537"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05790",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1131"
]
},
"annotation":{
"ncbigi":[
"499561947"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05790"
],
"refseq_old_locus_tag":[
"Synpcc7942_1131"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02565",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0505"
]
},
"annotation":{
"ncbigi":[
"499562544"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02565"
],
"refseq_old_locus_tag":[
"Synpcc7942_0505"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04205",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0813"
]
},
"annotation":{
"ncbigi":[
"499562255"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04205"
],
"refseq_old_locus_tag":[
"Synpcc7942_0813"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07630",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1493"
]
},
"annotation":{
"ncbigi":[
"499697320"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07630"
],
"refseq_old_locus_tag":[
"Synpcc7942_1493"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04060",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0783"
]
},
"annotation":{
"ncbigi":[
"499562283"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04060"
],
"refseq_old_locus_tag":[
"Synpcc7942_0783"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00640",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0126"
]
},
"annotation":{
"ncbigi":[
"499696720"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00640"
],
"refseq_old_locus_tag":[
"Synpcc7942_0126"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0715"
]
},
"annotation":{
"ncbigi":[
"1105096533"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03670"
],
"refseq_old_locus_tag":[
"Synpcc7942_0715"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08825",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1734"
]
},
"annotation":{
"ncbigi":[
"499563884"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08825"
],
"refseq_old_locus_tag":[
"Synpcc7942_1734"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08600",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1688"
]
},
"annotation":{
"ncbigi":[
"499563929"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08600"
],
"refseq_old_locus_tag":[
"Synpcc7942_1688"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10710",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2113"
]
},
"annotation":{
"ncbigi":[
"499697587"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10710"
],
"refseq_old_locus_tag":[
"Synpcc7942_2113"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10645",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2100"
]
},
"annotation":{
"ncbigi":[
"499563520"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10645"
],
"refseq_old_locus_tag":[
"Synpcc7942_2100"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08560",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1680"
]
},
"annotation":{
"ncbigi":[
"499697404"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08560"
],
"refseq_old_locus_tag":[
"Synpcc7942_1680"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05885",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1149"
]
},
"annotation":{
"ncbigi":[
"499697150"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05885"
],
"refseq_old_locus_tag":[
"Synpcc7942_1149"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08765",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1722"
]
},
"annotation":{
"ncbigi":[
"499563896"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08765"
],
"refseq_old_locus_tag":[
"Synpcc7942_1722"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04770",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0927"
]
},
"annotation":{
"ncbigi":[
"499697057"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04770"
],
"refseq_old_locus_tag":[
"Synpcc7942_0927"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07015",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1371"
]
},
"annotation":{
"ncbigi":[
"499561716"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07015"
],
"refseq_old_locus_tag":[
"Synpcc7942_1371"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03225",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0628"
]
},
"annotation":{
"ncbigi":[
"499562425"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03225"
],
"refseq_old_locus_tag":[
"Synpcc7942_0628"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00695",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0137"
]
},
"annotation":{
"ncbigi":[
"499562897"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00695"
],
"refseq_old_locus_tag":[
"Synpcc7942_0137"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03195",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0623"
]
},
"annotation":{
"ncbigi":[
"499696917"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03195"
],
"refseq_old_locus_tag":[
"Synpcc7942_0623"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08570",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1682"
]
},
"annotation":{
"ncbigi":[
"499697406"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08570"
],
"refseq_old_locus_tag":[
"Synpcc7942_1682"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0004"
]
},
"annotation":{
"ncbigi":[
"499563020"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00020"
],
"refseq_old_locus_tag":[
"Synpcc7942_0004"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08590",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1686"
]
},
"annotation":{
"ncbigi":[
"499563931"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08590"
],
"refseq_old_locus_tag":[
"Synpcc7942_1686"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00970",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0191"
]
},
"annotation":{
"ncbigi":[
"499562849"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00970"
],
"refseq_old_locus_tag":[
"Synpcc7942_0191"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07080",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1383"
]
},
"annotation":{
"ncbigi":[
"499561703"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07080"
],
"refseq_old_locus_tag":[
"Synpcc7942_1383"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08595",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1687"
]
},
"annotation":{
"ncbigi":[
"499697408"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08595"
],
"refseq_old_locus_tag":[
"Synpcc7942_1687"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08585",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1685"
]
},
"annotation":{
"ncbigi":[
"499563932"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08585"
],
"refseq_old_locus_tag":[
"Synpcc7942_1685"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0525"
]
},
"annotation":{
"ncbigi":[
"499562525"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02670"
],
"refseq_old_locus_tag":[
"Synpcc7942_0525"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08565",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1681"
]
},
"annotation":{
"ncbigi":[
"499697405"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08565"
],
"refseq_old_locus_tag":[
"Synpcc7942_1681"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10765",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2123"
]
},
"annotation":{
"ncbigi":[
"499697594"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10765"
],
"refseq_old_locus_tag":[
"Synpcc7942_2123"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01380",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0271"
]
},
"annotation":{
"ncbigi":[
"499562771"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01380"
],
"refseq_old_locus_tag":[
"Synpcc7942_0271"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08855",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1740"
]
},
"annotation":{
"ncbigi":[
"499563878"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08855"
],
"refseq_old_locus_tag":[
"Synpcc7942_1740"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03210",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0626"
]
},
"annotation":{
"ncbigi":[
"499562427"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03210"
],
"refseq_old_locus_tag":[
"Synpcc7942_0626"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03060",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0597"
]
},
"annotation":{
"ncbigi":[
"499696904"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03060"
],
"refseq_old_locus_tag":[
"Synpcc7942_0597"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02185",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0428"
]
},
"annotation":{
"ncbigi":[
"499562617"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02185"
],
"refseq_old_locus_tag":[
"Synpcc7942_0428"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07450",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1456"
]
},
"annotation":{
"ncbigi":[
"499561631"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07450"
],
"refseq_old_locus_tag":[
"Synpcc7942_1456"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11240",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2213"
]
},
"annotation":{
"ncbigi":[
"499563411"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11240"
],
"refseq_old_locus_tag":[
"Synpcc7942_2213"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09105",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1792"
]
},
"annotation":{
"ncbigi":[
"499563828"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09105"
],
"refseq_old_locus_tag":[
"Synpcc7942_1792"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0272"
]
},
"annotation":{
"ncbigi":[
"499562770"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01385"
],
"refseq_old_locus_tag":[
"Synpcc7942_0272"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12090",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2379"
]
},
"annotation":{
"ncbigi":[
"499697701"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12090"
],
"refseq_old_locus_tag":[
"Synpcc7942_2379"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04970",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0967"
]
},
"annotation":{
"ncbigi":[
"499562104"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04970"
],
"refseq_old_locus_tag":[
"Synpcc7942_0967"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06620",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1294"
]
},
"annotation":{
"ncbigi":[
"499697233"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06620"
],
"refseq_old_locus_tag":[
"Synpcc7942_1294"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13310",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2613"
]
},
"annotation":{
"ncbigi":[
"499563024"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13310"
],
"refseq_old_locus_tag":[
"Synpcc7942_2613"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00200",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0040"
]
},
"annotation":{
"ncbigi":[
"499562986"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00200"
],
"refseq_old_locus_tag":[
"Synpcc7942_0040"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04050",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0781"
]
},
"annotation":{
"ncbigi":[
"499696991"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04050"
],
"refseq_old_locus_tag":[
"Synpcc7942_0781"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07370",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1441"
]
},
"annotation":{
"ncbigi":[
"499561645"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07370"
],
"refseq_old_locus_tag":[
"Synpcc7942_1441"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09260",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1825"
]
},
"annotation":{
"ncbigi":[
"748184810"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09260"
],
"refseq_old_locus_tag":[
"Synpcc7942_1825"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04790",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0931"
]
},
"annotation":{
"ncbigi":[
"499697060"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04790"
],
"refseq_old_locus_tag":[
"Synpcc7942_0931"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02715",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0534"
]
},
"annotation":{
"ncbigi":[
"499562516"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02715"
],
"refseq_old_locus_tag":[
"Synpcc7942_0534"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11710",
"name":"ppnK",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2304"
]
},
"annotation":{
"ncbigi":[
"499697664"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11710"
],
"refseq_name":[
"ppnK"
],
"refseq_old_locus_tag":[
"Synpcc7942_2304"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00790",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0156"
]
},
"annotation":{
"ncbigi":[
"499562879"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00790"
],
"refseq_old_locus_tag":[
"Synpcc7942_0156"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09465",
"name":"ppnK",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1865"
]
},
"annotation":{
"ncbigi":[
"499563756"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09465"
],
"refseq_name":[
"ppnK"
],
"refseq_old_locus_tag":[
"Synpcc7942_1865"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12050",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2371"
]
},
"annotation":{
"ncbigi":[
"499563261"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12050"
],
"refseq_old_locus_tag":[
"Synpcc7942_2371"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04160",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0804"
]
},
"annotation":{
"ncbigi":[
"499562263"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04160"
],
"refseq_old_locus_tag":[
"Synpcc7942_0804"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12205",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2402"
]
},
"annotation":{
"ncbigi":[
"499563230"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12205"
],
"refseq_old_locus_tag":[
"Synpcc7942_2402"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00770",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0152"
]
},
"annotation":{
"ncbigi":[
"499562882"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00770"
],
"refseq_old_locus_tag":[
"Synpcc7942_0152"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06350",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1239"
]
},
"annotation":{
"ncbigi":[
"499561842"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06350"
],
"refseq_old_locus_tag":[
"Synpcc7942_1239"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06345",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1238"
]
},
"annotation":{
"ncbigi":[
"499561843"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06345"
],
"refseq_old_locus_tag":[
"Synpcc7942_1238"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07620",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1491"
]
},
"annotation":{
"ncbigi":[
"499564004"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07620"
],
"refseq_old_locus_tag":[
"Synpcc7942_1491"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04795",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0932"
]
},
"annotation":{
"ncbigi":[
"499562139"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04795"
],
"refseq_old_locus_tag":[
"Synpcc7942_0932"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07615",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1490"
]
},
"annotation":{
"ncbigi":[
"499564003"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07615"
],
"refseq_old_locus_tag":[
"Synpcc7942_1490"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06340",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1237"
]
},
"annotation":{
"ncbigi":[
"499561844"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06340"
],
"refseq_old_locus_tag":[
"Synpcc7942_1237"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07915",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1552"
]
},
"annotation":{
"ncbigi":[
"748184563"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07915"
],
"refseq_old_locus_tag":[
"Synpcc7942_1552"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06335",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1236"
]
},
"annotation":{
"ncbigi":[
"499561845"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06335"
],
"refseq_old_locus_tag":[
"Synpcc7942_1236"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02735",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0538"
]
},
"annotation":{
"ncbigi":[
"499562512"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02735"
],
"refseq_old_locus_tag":[
"Synpcc7942_0538"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07605",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1488"
]
},
"annotation":{
"ncbigi":[
"499697318"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07605"
],
"refseq_old_locus_tag":[
"Synpcc7942_1488"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00585",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0116"
]
},
"annotation":{
"ncbigi":[
"499562917"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00585"
],
"refseq_old_locus_tag":[
"Synpcc7942_0116"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07610",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1489"
]
},
"annotation":{
"ncbigi":[
"499564002"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07610"
],
"refseq_old_locus_tag":[
"Synpcc7942_1489"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07210",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1409"
]
},
"annotation":{
"ncbigi":[
"499561677"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07210"
],
"refseq_old_locus_tag":[
"Synpcc7942_1409"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01490",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0292"
]
},
"annotation":{
"ncbigi":[
"499696788"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01490"
],
"refseq_old_locus_tag":[
"Synpcc7942_0292"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08980",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1767"
]
},
"annotation":{
"ncbigi":[
"748184524"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08980"
],
"refseq_old_locus_tag":[
"Synpcc7942_1767"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07195",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1406"
]
},
"annotation":{
"ncbigi":[
"499697289"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07195"
],
"refseq_old_locus_tag":[
"Synpcc7942_1406"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11055",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2175"
]
},
"annotation":{
"ncbigi":[
"499563447"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11055"
],
"refseq_old_locus_tag":[
"Synpcc7942_2175"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07215",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1410"
]
},
"annotation":{
"ncbigi":[
"499697291"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07215"
],
"refseq_old_locus_tag":[
"Synpcc7942_1410"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08975",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1766"
]
},
"annotation":{
"ncbigi":[
"499697446"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08975"
],
"refseq_old_locus_tag":[
"Synpcc7942_1766"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02945",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0579"
]
},
"annotation":{
"ncbigi":[
"499562473"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02945"
],
"refseq_old_locus_tag":[
"Synpcc7942_0579"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06885",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1347"
]
},
"annotation":{
"ncbigi":[
"499561737"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06885"
],
"refseq_old_locus_tag":[
"Synpcc7942_1347"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07830",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1532"
]
},
"annotation":{
"ncbigi":[
"499564045"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07830"
],
"refseq_old_locus_tag":[
"Synpcc7942_1532"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1501"
]
},
"annotation":{
"ncbigi":[
"748184822"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07670"
],
"refseq_old_locus_tag":[
"Synpcc7942_1501"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07825",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1531"
]
},
"annotation":{
"ncbigi":[
"499564044"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07825"
],
"refseq_old_locus_tag":[
"Synpcc7942_1531"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09980",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1967"
]
},
"annotation":{
"ncbigi":[
"499697523"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09980"
],
"refseq_old_locus_tag":[
"Synpcc7942_1967"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01075",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0212"
]
},
"annotation":{
"ncbigi":[
"499696763"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01075"
],
"refseq_old_locus_tag":[
"Synpcc7942_0212"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13180",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2588"
]
},
"annotation":{
"ncbigi":[
"499563049"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13180"
],
"refseq_old_locus_tag":[
"Synpcc7942_2588"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04705",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0915"
]
},
"annotation":{
"ncbigi":[
"499562156"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04705"
],
"refseq_old_locus_tag":[
"Synpcc7942_0915"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10365",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2043"
]
},
"annotation":{
"ncbigi":[
"499563577"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10365"
],
"refseq_old_locus_tag":[
"Synpcc7942_2043"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2055"
]
},
"annotation":{
"ncbigi":[
"499563565"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10425"
],
"refseq_old_locus_tag":[
"Synpcc7942_2055"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2249"
]
},
"annotation":{
"ncbigi":[
"499697638"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11425"
],
"refseq_old_locus_tag":[
"Synpcc7942_2249"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04145",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0801"
]
},
"annotation":{
"ncbigi":[
"748184680"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04145"
],
"refseq_old_locus_tag":[
"Synpcc7942_0801"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10815",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2132"
]
},
"annotation":{
"ncbigi":[
"499697598"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10815"
],
"refseq_old_locus_tag":[
"Synpcc7942_2132"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0849"
]
},
"annotation":{
"ncbigi":[
"499562220"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04385"
],
"refseq_old_locus_tag":[
"Synpcc7942_0849"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12505",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2460"
]
},
"annotation":{
"ncbigi":[
"499563171"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12505"
],
"refseq_old_locus_tag":[
"Synpcc7942_2460"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05560",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1083"
]
},
"annotation":{
"ncbigi":[
"499561995"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05560"
],
"refseq_old_locus_tag":[
"Synpcc7942_1083"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13150",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2582"
]
},
"annotation":{
"ncbigi":[
"499563055"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13150"
],
"refseq_old_locus_tag":[
"Synpcc7942_2582"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07500",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1466"
]
},
"annotation":{
"ncbigi":[
"499563980"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07500"
],
"refseq_old_locus_tag":[
"Synpcc7942_1466"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04890",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0951"
]
},
"annotation":{
"ncbigi":[
"499697069"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04890"
],
"refseq_old_locus_tag":[
"Synpcc7942_0951"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04830",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0939"
]
},
"annotation":{
"ncbigi":[
"499562132"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04830"
],
"refseq_old_locus_tag":[
"Synpcc7942_0939"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08215",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1610"
]
},
"annotation":{
"ncbigi":[
"499697379"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08215"
],
"refseq_old_locus_tag":[
"Synpcc7942_1610"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08220",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1611"
]
},
"annotation":{
"ncbigi":[
"499561598"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08220"
],
"refseq_old_locus_tag":[
"Synpcc7942_1611"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13380",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_B2664"
]
},
"annotation":{
"refseq_locus_tag":[
"SYNPCC7942_RS13380"
],
"refseq_old_locus_tag":[
"Synpcc7942_B2664"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08225",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1612"
]
},
"annotation":{
"ncbigi":[
"499561599"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08225"
],
"refseq_old_locus_tag":[
"Synpcc7942_1612"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08875",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1744"
]
},
"annotation":{
"ncbigi":[
"499563874"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08875"
],
"refseq_old_locus_tag":[
"Synpcc7942_1744"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12600",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2480"
]
},
"annotation":{
"ncbigi":[
"499563151"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12600"
],
"refseq_old_locus_tag":[
"Synpcc7942_2480"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06000",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1170"
]
},
"annotation":{
"ncbigi":[
"499561909"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06000"
],
"refseq_old_locus_tag":[
"Synpcc7942_1170"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1570"
]
},
"annotation":{
"ncbigi":[
"499697355"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08020"
],
"refseq_old_locus_tag":[
"Synpcc7942_1570"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05175",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1008"
]
},
"annotation":{
"ncbigi":[
"499697093"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05175"
],
"refseq_old_locus_tag":[
"Synpcc7942_1008"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11780",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2317"
]
},
"annotation":{
"ncbigi":[
"499697670"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11780"
],
"refseq_old_locus_tag":[
"Synpcc7942_2317"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03310",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0645"
]
},
"annotation":{
"ncbigi":[
"748184720"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03310"
],
"refseq_old_locus_tag":[
"Synpcc7942_0645"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03490",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0681"
]
},
"annotation":{
"ncbigi":[
"499696947"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03490"
],
"refseq_old_locus_tag":[
"Synpcc7942_0681"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07585",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1484"
]
},
"annotation":{
"ncbigi":[
"499697317"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07585"
],
"refseq_old_locus_tag":[
"Synpcc7942_1484"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00345",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0070"
]
},
"annotation":{
"ncbigi":[
"499562963"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00345"
],
"refseq_old_locus_tag":[
"Synpcc7942_0070"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01070",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0211"
]
},
"annotation":{
"ncbigi":[
"499696762"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01070"
],
"refseq_old_locus_tag":[
"Synpcc7942_0211"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10465",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2063"
]
},
"annotation":{
"ncbigi":[
"499563557"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10465"
],
"refseq_old_locus_tag":[
"Synpcc7942_2063"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0086"
]
},
"annotation":{
"ncbigi":[
"499562947"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00425"
],
"refseq_old_locus_tag":[
"Synpcc7942_0086"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07300",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1427"
]
},
"annotation":{
"ncbigi":[
"748184585"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07300"
],
"refseq_old_locus_tag":[
"Synpcc7942_1427"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11525",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2268"
]
},
"annotation":{
"ncbigi":[
"499563358"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11525"
],
"refseq_old_locus_tag":[
"Synpcc7942_2268"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07295",
"name":"rbcL",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1426"
]
},
"annotation":{
"ncbigi":[
"499561661"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07295"
],
"refseq_name":[
"rbcL"
],
"refseq_old_locus_tag":[
"Synpcc7942_1426"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00840",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0166"
]
},
"annotation":{
"ncbigi":[
"499562869"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00840"
],
"refseq_old_locus_tag":[
"Synpcc7942_0166"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04395",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0851"
]
},
"annotation":{
"ncbigi":[
"499697029"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04395"
],
"refseq_old_locus_tag":[
"Synpcc7942_0851"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00940",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0185"
]
},
"annotation":{
"ncbigi":[
"499696749"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00940"
],
"refseq_old_locus_tag":[
"Synpcc7942_0185"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01125",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0221"
]
},
"annotation":{
"ncbigi":[
"499562820"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01125"
],
"refseq_old_locus_tag":[
"Synpcc7942_0221"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09615",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1896"
]
},
"annotation":{
"ncbigi":[
"499563726"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09615"
],
"refseq_old_locus_tag":[
"Synpcc7942_1896"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11770",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2315"
]
},
"annotation":{
"ncbigi":[
"499563314"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11770"
],
"refseq_old_locus_tag":[
"Synpcc7942_2315"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02080",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0408"
]
},
"annotation":{
"ncbigi":[
"499696834"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02080"
],
"refseq_old_locus_tag":[
"Synpcc7942_0408"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05245",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1020"
]
},
"annotation":{
"ncbigi":[
"499562055"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05245"
],
"refseq_old_locus_tag":[
"Synpcc7942_1020"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09410",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1855"
]
},
"annotation":{
"ncbigi":[
"499697485"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09410"
],
"refseq_old_locus_tag":[
"Synpcc7942_1855"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_2107",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2107"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01715",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0337"
]
},
"annotation":{
"ncbigi":[
"499696806"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01715"
],
"refseq_old_locus_tag":[
"Synpcc7942_0337"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01965",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0385"
]
},
"annotation":{
"ncbigi":[
"748184321"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01965"
],
"refseq_old_locus_tag":[
"Synpcc7942_0385"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01685",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0331"
]
},
"annotation":{
"ncbigi":[
"748184744"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01685"
],
"refseq_old_locus_tag":[
"Synpcc7942_0331"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2105"
]
},
"annotation":{
"ncbigi":[
"499563515"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10670"
],
"refseq_old_locus_tag":[
"Synpcc7942_2105"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03430",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0670"
]
},
"annotation":{
"ncbigi":[
"499562388"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03430"
],
"refseq_old_locus_tag":[
"Synpcc7942_0670"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10675",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2106"
]
},
"annotation":{
"ncbigi":[
"499563514"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10675"
],
"refseq_old_locus_tag":[
"Synpcc7942_2106"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01710",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0336"
]
},
"annotation":{
"ncbigi":[
"499696805"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01710"
],
"refseq_old_locus_tag":[
"Synpcc7942_0336"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01695",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0333"
]
},
"annotation":{
"ncbigi":[
"499562709"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01695"
],
"refseq_old_locus_tag":[
"Synpcc7942_0333"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09420",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1857"
]
},
"annotation":{
"ncbigi":[
"499697487"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09420"
],
"refseq_old_locus_tag":[
"Synpcc7942_1857"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04540",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0881"
]
},
"annotation":{
"ncbigi":[
"499697042"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04540"
],
"refseq_old_locus_tag":[
"Synpcc7942_0881"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10180",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2007"
]
},
"annotation":{
"ncbigi":[
"499563615"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10180"
],
"refseq_old_locus_tag":[
"Synpcc7942_2007"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01690",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0332"
]
},
"annotation":{
"ncbigi":[
"499562710"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01690"
],
"refseq_old_locus_tag":[
"Synpcc7942_0332"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11775",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2316"
]
},
"annotation":{
"ncbigi":[
"499563313"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11775"
],
"refseq_old_locus_tag":[
"Synpcc7942_2316"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06635",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1297"
]
},
"annotation":{
"ncbigi":[
"499561787"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06635"
],
"refseq_old_locus_tag":[
"Synpcc7942_1297"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01700",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0334"
]
},
"annotation":{
"ncbigi":[
"499696804"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01700"
],
"refseq_old_locus_tag":[
"Synpcc7942_0334"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01705",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0335"
]
},
"annotation":{
"ncbigi":[
"499562707"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01705"
],
"refseq_old_locus_tag":[
"Synpcc7942_0335"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13675",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0456"
]
},
"annotation":{
"ncbigi":[
"493208860"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13675"
],
"refseq_old_locus_tag":[
"Synpcc7942_0456"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01030",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0203"
]
},
"annotation":{
"ncbigi":[
"499696757"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01030"
],
"refseq_old_locus_tag":[
"Synpcc7942_0203"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10565",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2084"
]
},
"annotation":{
"ncbigi":[
"499697574"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10565"
],
"refseq_old_locus_tag":[
"Synpcc7942_2084"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06075",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1186"
]
},
"annotation":{
"ncbigi":[
"499697171"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06075"
],
"refseq_old_locus_tag":[
"Synpcc7942_1186"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01505",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0295"
]
},
"annotation":{
"ncbigi":[
"499562746"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01505"
],
"refseq_old_locus_tag":[
"Synpcc7942_0295"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08740",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1718"
]
},
"annotation":{
"ncbigi":[
"499697423"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08740"
],
"refseq_old_locus_tag":[
"Synpcc7942_1718"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03355",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0655"
]
},
"annotation":{
"ncbigi":[
"499562402"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03355"
],
"refseq_old_locus_tag":[
"Synpcc7942_0655"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01390",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0273"
]
},
"annotation":{
"ncbigi":[
"499562769"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01390"
],
"refseq_old_locus_tag":[
"Synpcc7942_0273"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10225",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2016"
]
},
"annotation":{
"ncbigi":[
"499563606"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10225"
],
"refseq_old_locus_tag":[
"Synpcc7942_2016"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07260",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1419"
]
},
"annotation":{
"ncbigi":[
"499561668"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07260"
],
"refseq_old_locus_tag":[
"Synpcc7942_1419"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09325",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1838"
]
},
"annotation":{
"ncbigi":[
"499563783"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09325"
],
"refseq_old_locus_tag":[
"Synpcc7942_1838"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01405",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0276"
]
},
"annotation":{
"ncbigi":[
"499562766"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01405"
],
"refseq_old_locus_tag":[
"Synpcc7942_0276"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07265",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1420"
]
},
"annotation":{
"ncbigi":[
"499697294"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07265"
],
"refseq_old_locus_tag":[
"Synpcc7942_1420"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03585",
"name":"psbM",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0699"
]
},
"annotation":{
"ncbigi":[
"499562360"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03585"
],
"refseq_name":[
"psbM"
],
"refseq_old_locus_tag":[
"Synpcc7942_0699"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12575",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2475"
]
},
"annotation":{
"ncbigi":[
"748184782"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12575"
],
"refseq_old_locus_tag":[
"Synpcc7942_2475"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01500",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0294"
]
},
"annotation":{
"ncbigi":[
"499562747"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01500"
],
"refseq_old_locus_tag":[
"Synpcc7942_0294"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07365",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1440"
]
},
"annotation":{
"ncbigi":[
"499561646"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07365"
],
"refseq_old_locus_tag":[
"Synpcc7942_1440"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2445"
]
},
"annotation":{
"ncbigi":[
"499563188"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12425"
],
"refseq_old_locus_tag":[
"Synpcc7942_2445"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12395",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2439"
]
},
"annotation":{
"ncbigi":[
"499563194"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12395"
],
"refseq_old_locus_tag":[
"Synpcc7942_2439"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12405",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2441"
]
},
"annotation":{
"ncbigi":[
"499697730"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12405"
],
"refseq_old_locus_tag":[
"Synpcc7942_2441"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_2010",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2010"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06020",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1175"
]
},
"annotation":{
"ncbigi":[
"499697167"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06020"
],
"refseq_old_locus_tag":[
"Synpcc7942_1175"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11545",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2272"
]
},
"annotation":{
"ncbigi":[
"499563354"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11545"
],
"refseq_old_locus_tag":[
"Synpcc7942_2272"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01145",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0225"
]
},
"annotation":{
"ncbigi":[
"499562817"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01145"
],
"refseq_old_locus_tag":[
"Synpcc7942_0225"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12415",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2443"
]
},
"annotation":{
"ncbigi":[
"499697731"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12415"
],
"refseq_old_locus_tag":[
"Synpcc7942_2443"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03170",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0618"
]
},
"annotation":{
"ncbigi":[
"499696915"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03170"
],
"refseq_old_locus_tag":[
"Synpcc7942_0618"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11865",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2334"
]
},
"annotation":{
"ncbigi":[
"499563295"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11865"
],
"refseq_old_locus_tag":[
"Synpcc7942_2334"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12420",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2444"
]
},
"annotation":{
"ncbigi":[
"499563189"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12420"
],
"refseq_old_locus_tag":[
"Synpcc7942_2444"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09955",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1962"
]
},
"annotation":{
"ncbigi":[
"499563660"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09955"
],
"refseq_old_locus_tag":[
"Synpcc7942_1962"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06495",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1268"
]
},
"annotation":{
"ncbigi":[
"499561814"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06495"
],
"refseq_old_locus_tag":[
"Synpcc7942_1268"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13745",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1174"
]
},
"annotation":{
"ncbigi":[
"499697166"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13745"
],
"refseq_old_locus_tag":[
"Synpcc7942_1174"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12410",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2442"
]
},
"annotation":{
"ncbigi":[
"499563191"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12410"
],
"refseq_old_locus_tag":[
"Synpcc7942_2442"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09400",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1853"
]
},
"annotation":{
"ncbigi":[
"499563768"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09400"
],
"refseq_old_locus_tag":[
"Synpcc7942_1853"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12245",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2409"
]
},
"annotation":{
"ncbigi":[
"499697717"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12245"
],
"refseq_old_locus_tag":[
"Synpcc7942_2409"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02165",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0424"
]
},
"annotation":{
"ncbigi":[
"499562621"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02165"
],
"refseq_old_locus_tag":[
"Synpcc7942_0424"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03575",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0697"
]
},
"annotation":{
"ncbigi":[
"499562362"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03575"
],
"refseq_old_locus_tag":[
"Synpcc7942_0697"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06030",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1177"
]
},
"annotation":{
"ncbigi":[
"499561902"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06030"
],
"refseq_old_locus_tag":[
"Synpcc7942_1177"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12105",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2382"
]
},
"annotation":{
"ncbigi":[
"499563250"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12105"
],
"refseq_old_locus_tag":[
"Synpcc7942_2382"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04600",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0893"
]
},
"annotation":{
"ncbigi":[
"499561697"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04600"
],
"refseq_old_locus_tag":[
"Synpcc7942_0893"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09405",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1854"
]
},
"annotation":{
"ncbigi":[
"499697484"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09405"
],
"refseq_old_locus_tag":[
"Synpcc7942_1854"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05685",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1109"
]
},
"annotation":{
"ncbigi":[
"499697132"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05685"
],
"refseq_old_locus_tag":[
"Synpcc7942_1109"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08145",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1595"
]
},
"annotation":{
"ncbigi":[
"499561582"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08145"
],
"refseq_old_locus_tag":[
"Synpcc7942_1595"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09925",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1956"
]
},
"annotation":{
"ncbigi":[
"499563666"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09925"
],
"refseq_old_locus_tag":[
"Synpcc7942_1956"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13795",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1705"
]
},
"annotation":{
"ncbigi":[
"499563913"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13795"
],
"refseq_old_locus_tag":[
"Synpcc7942_1705"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07060",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1379"
]
},
"annotation":{
"ncbigi":[
"499561708"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07060"
],
"refseq_old_locus_tag":[
"Synpcc7942_1379"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03570",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0696"
]
},
"annotation":{
"ncbigi":[
"499562363"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03570"
],
"refseq_old_locus_tag":[
"Synpcc7942_0696"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05355",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1044"
]
},
"annotation":{
"ncbigi":[
"499562033"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05355"
],
"refseq_old_locus_tag":[
"Synpcc7942_1044"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03275",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0638"
]
},
"annotation":{
"ncbigi":[
"499562416"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03275"
],
"refseq_old_locus_tag":[
"Synpcc7942_0638"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13030",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2564"
]
},
"annotation":{
"ncbigi":[
"499563073"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13030"
],
"refseq_old_locus_tag":[
"Synpcc7942_2564"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09920",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1954"
]
},
"annotation":{
"ncbigi":[
"499697517"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09920"
],
"refseq_old_locus_tag":[
"Synpcc7942_1954"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06025",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1176"
]
},
"annotation":{
"ncbigi":[
"499561903"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06025"
],
"refseq_old_locus_tag":[
"Synpcc7942_1176"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11455",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2253"
]
},
"annotation":{
"ncbigi":[
"748184790"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11455"
],
"refseq_old_locus_tag":[
"Synpcc7942_2253"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11400",
"name":"psbZ",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2245"
]
},
"annotation":{
"ncbigi":[
"499563380"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11400"
],
"refseq_name":[
"psbZ"
],
"refseq_old_locus_tag":[
"Synpcc7942_2245"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07110",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1389"
]
},
"annotation":{
"ncbigi":[
"499561697"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07110"
],
"refseq_old_locus_tag":[
"Synpcc7942_1389"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10665",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2104"
]
},
"annotation":{
"ncbigi":[
"499563516"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10665"
],
"refseq_old_locus_tag":[
"Synpcc7942_2104"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03360",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0656"
]
},
"annotation":{
"ncbigi":[
"499696932"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03360"
],
"refseq_old_locus_tag":[
"Synpcc7942_0656"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00590",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0118"
]
},
"annotation":{
"ncbigi":[
"499696716"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00590"
],
"refseq_old_locus_tag":[
"Synpcc7942_0118"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01750",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0343"
]
},
"annotation":{
"ncbigi":[
"499696808"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01750"
],
"refseq_old_locus_tag":[
"Synpcc7942_0343"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08350",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1637"
]
},
"annotation":{
"ncbigi":[
"499562402"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08350"
],
"refseq_old_locus_tag":[
"Synpcc7942_1637"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11815",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2324"
]
},
"annotation":{
"ncbigi":[
"499563305"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11815"
],
"refseq_old_locus_tag":[
"Synpcc7942_2324"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05065",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0986"
]
},
"annotation":{
"ncbigi":[
"499562087"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05065"
],
"refseq_old_locus_tag":[
"Synpcc7942_0986"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10735",
"name":"gatA",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2117"
]
},
"annotation":{
"ncbigi":[
"499697590"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10735"
],
"refseq_name":[
"gatA"
],
"refseq_old_locus_tag":[
"Synpcc7942_2117"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05330",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1038"
]
},
"annotation":{
"ncbigi":[
"499562038"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05330"
],
"refseq_old_locus_tag":[
"Synpcc7942_1038"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11805",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2322"
]
},
"annotation":{
"ncbigi":[
"499697671"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11805"
],
"refseq_old_locus_tag":[
"Synpcc7942_2322"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01140",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0224"
]
},
"annotation":{
"ncbigi":[
"499562818"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01140"
],
"refseq_old_locus_tag":[
"Synpcc7942_0224"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08555",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1679"
]
},
"annotation":{
"ncbigi":[
"499563938"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08555"
],
"refseq_old_locus_tag":[
"Synpcc7942_1679"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05545",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1080"
]
},
"annotation":{
"ncbigi":[
"499697122"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05545"
],
"refseq_old_locus_tag":[
"Synpcc7942_1080"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13060",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2570"
]
},
"annotation":{
"ncbigi":[
"499563067"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13060"
],
"refseq_old_locus_tag":[
"Synpcc7942_2570"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05550",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1081"
]
},
"annotation":{
"ncbigi":[
"499561997"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05550"
],
"refseq_old_locus_tag":[
"Synpcc7942_1081"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09545",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1882"
]
},
"annotation":{
"ncbigi":[
"499563740"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09545"
],
"refseq_old_locus_tag":[
"Synpcc7942_1882"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05845",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1142"
]
},
"annotation":{
"ncbigi":[
"499561937"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05845"
],
"refseq_old_locus_tag":[
"Synpcc7942_1142"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12590",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2478"
]
},
"annotation":{
"ncbigi":[
"499563153"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12590"
],
"refseq_old_locus_tag":[
"Synpcc7942_2478"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05480",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1068"
]
},
"annotation":{
"ncbigi":[
"499697116"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05480"
],
"refseq_old_locus_tag":[
"Synpcc7942_1068"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02295",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0449"
]
},
"annotation":{
"ncbigi":[
"499562597"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02295"
],
"refseq_old_locus_tag":[
"Synpcc7942_0449"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09865",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1944"
]
},
"annotation":{
"ncbigi":[
"499563677"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09865"
],
"refseq_old_locus_tag":[
"Synpcc7942_1944"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00110",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0021"
]
},
"annotation":{
"ncbigi":[
"499563003"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00110"
],
"refseq_old_locus_tag":[
"Synpcc7942_0021"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00095",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0018"
]
},
"annotation":{
"ncbigi":[
"499696668"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00095"
],
"refseq_old_locus_tag":[
"Synpcc7942_0018"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06135",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1198"
]
},
"annotation":{
"ncbigi":[
"499697178"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06135"
],
"refseq_old_locus_tag":[
"Synpcc7942_1198"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12485",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2457"
]
},
"annotation":{
"ncbigi":[
"499697738"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12485"
],
"refseq_old_locus_tag":[
"Synpcc7942_2457"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00725",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0143"
]
},
"annotation":{
"ncbigi":[
"499696730"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00725"
],
"refseq_old_locus_tag":[
"Synpcc7942_0143"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08505",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1668"
]
},
"annotation":{
"ncbigi":[
"499563948"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08505"
],
"refseq_old_locus_tag":[
"Synpcc7942_1668"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08515",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1671"
]
},
"annotation":{
"ncbigi":[
"499697403"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08515"
],
"refseq_old_locus_tag":[
"Synpcc7942_1671"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09940",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1959"
]
},
"annotation":{
"ncbigi":[
"499697519"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09940"
],
"refseq_old_locus_tag":[
"Synpcc7942_1959"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08800",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1729"
]
},
"annotation":{
"ncbigi":[
"499563889"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08800"
],
"refseq_old_locus_tag":[
"Synpcc7942_1729"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02965",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0583"
]
},
"annotation":{
"ncbigi":[
"499562469"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02965"
],
"refseq_old_locus_tag":[
"Synpcc7942_0583"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08475",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1662"
]
},
"annotation":{
"ncbigi":[
"499563953"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08475"
],
"refseq_old_locus_tag":[
"Synpcc7942_1662"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11555",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2274"
]
},
"annotation":{
"ncbigi":[
"499563352"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11555"
],
"refseq_old_locus_tag":[
"Synpcc7942_2274"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08510",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1669"
]
},
"annotation":{
"ncbigi":[
"499563947"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08510"
],
"refseq_old_locus_tag":[
"Synpcc7942_1669"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03280",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0639"
]
},
"annotation":{
"ncbigi":[
"499562415"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03280"
],
"refseq_old_locus_tag":[
"Synpcc7942_0639"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10840",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2137"
]
},
"annotation":{
"ncbigi":[
"499563482"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10840"
],
"refseq_old_locus_tag":[
"Synpcc7942_2137"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10640",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2099"
]
},
"annotation":{
"ncbigi":[
"499563521"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10640"
],
"refseq_old_locus_tag":[
"Synpcc7942_2099"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08055",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1577"
]
},
"annotation":{
"ncbigi":[
"748184830"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08055"
],
"refseq_old_locus_tag":[
"Synpcc7942_1577"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00015",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0003"
]
},
"annotation":{
"ncbigi":[
"499563021"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00015"
],
"refseq_old_locus_tag":[
"Synpcc7942_0003"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04235",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0819"
]
},
"annotation":{
"ncbigi":[
"499562249"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04235"
],
"refseq_old_locus_tag":[
"Synpcc7942_0819"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06690",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1308"
]
},
"annotation":{
"ncbigi":[
"499561776"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06690"
],
"refseq_old_locus_tag":[
"Synpcc7942_1308"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04230",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0818"
]
},
"annotation":{
"ncbigi":[
"499697009"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04230"
],
"refseq_old_locus_tag":[
"Synpcc7942_0818"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06460",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1261"
]
},
"annotation":{
"ncbigi":[
"1105096542"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06460"
],
"refseq_old_locus_tag":[
"Synpcc7942_1261"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09395",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1852"
]
},
"annotation":{
"ncbigi":[
"499563769"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09395"
],
"refseq_old_locus_tag":[
"Synpcc7942_1852"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06615",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1293"
]
},
"annotation":{
"ncbigi":[
"499697232"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06615"
],
"refseq_old_locus_tag":[
"Synpcc7942_1293"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00960",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0189"
]
},
"annotation":{
"ncbigi":[
"499562851"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00960"
],
"refseq_old_locus_tag":[
"Synpcc7942_0189"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09280",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1829"
]
},
"annotation":{
"ncbigi":[
"499563792"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09280"
],
"refseq_old_locus_tag":[
"Synpcc7942_1829"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10470",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2064"
]
},
"annotation":{
"ncbigi":[
"499563556"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10470"
],
"refseq_old_locus_tag":[
"Synpcc7942_2064"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08445",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1656"
]
},
"annotation":{
"ncbigi":[
"499563958"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08445"
],
"refseq_old_locus_tag":[
"Synpcc7942_1656"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11500",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2263"
]
},
"annotation":{
"ncbigi":[
"499697647"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11500"
],
"refseq_old_locus_tag":[
"Synpcc7942_2263"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02505",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0492"
]
},
"annotation":{
"ncbigi":[
"499562557"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02505"
],
"refseq_old_locus_tag":[
"Synpcc7942_0492"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04290",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0830"
]
},
"annotation":{
"ncbigi":[
"499697016"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04290"
],
"refseq_old_locus_tag":[
"Synpcc7942_0830"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09390",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1851"
]
},
"annotation":{
"ncbigi":[
"499563770"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09390"
],
"refseq_old_locus_tag":[
"Synpcc7942_1851"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02010",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0394"
]
},
"annotation":{
"ncbigi":[
"499562650"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02010"
],
"refseq_old_locus_tag":[
"Synpcc7942_0394"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11995",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2361"
]
},
"annotation":{
"ncbigi":[
"499563269"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11995"
],
"refseq_old_locus_tag":[
"Synpcc7942_2361"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06715",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1313"
]
},
"annotation":{
"ncbigi":[
"499697244"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06715"
],
"refseq_old_locus_tag":[
"Synpcc7942_1313"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06355",
"name":"nirA",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1240"
]
},
"annotation":{
"ncbigi":[
"499561841"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06355"
],
"refseq_name":[
"nirA"
],
"refseq_old_locus_tag":[
"Synpcc7942_1240"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13275",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2606"
]
},
"annotation":{
"ncbigi":[
"499697796"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13275"
],
"refseq_old_locus_tag":[
"Synpcc7942_2606"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06220",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1214"
]
},
"annotation":{
"ncbigi":[
"499561867"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06220"
],
"refseq_old_locus_tag":[
"Synpcc7942_1214"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11185",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2201"
]
},
"annotation":{
"ncbigi":[
"499697630"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11185"
],
"refseq_old_locus_tag":[
"Synpcc7942_2201"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09745",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1920"
]
},
"annotation":{
"ncbigi":[
"499697506"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09745"
],
"refseq_old_locus_tag":[
"Synpcc7942_1920"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00100",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0019"
]
},
"annotation":{
"ncbigi":[
"499696669"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00100"
],
"refseq_old_locus_tag":[
"Synpcc7942_0019"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12380",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2437"
]
},
"annotation":{
"ncbigi":[
"499563196"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12380"
],
"refseq_old_locus_tag":[
"Synpcc7942_2437"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06820",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1334"
]
},
"annotation":{
"ncbigi":[
"499697256"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06820"
],
"refseq_old_locus_tag":[
"Synpcc7942_1334"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12270",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2415"
]
},
"annotation":{
"ncbigi":[
"499563218"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12270"
],
"refseq_old_locus_tag":[
"Synpcc7942_2415"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04515",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0876"
]
},
"annotation":{
"ncbigi":[
"748184669"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04515"
],
"refseq_old_locus_tag":[
"Synpcc7942_0876"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09340",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1841"
]
},
"annotation":{
"ncbigi":[
"499697480"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09340"
],
"refseq_old_locus_tag":[
"Synpcc7942_1841"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03010",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0587"
]
},
"annotation":{
"ncbigi":[
"499562465"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03010"
],
"refseq_old_locus_tag":[
"Synpcc7942_0587"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08745",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1719"
]
},
"annotation":{
"ncbigi":[
"499697424"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08745"
],
"refseq_old_locus_tag":[
"Synpcc7942_1719"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10695",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2110"
]
},
"annotation":{
"ncbigi":[
"499563509"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10695"
],
"refseq_old_locus_tag":[
"Synpcc7942_2110"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10100",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1992"
]
},
"annotation":{
"ncbigi":[
"499563631"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10100"
],
"refseq_old_locus_tag":[
"Synpcc7942_1992"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03485",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0680"
]
},
"annotation":{
"ncbigi":[
"499562378"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03485"
],
"refseq_old_locus_tag":[
"Synpcc7942_0680"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01885",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0370"
]
},
"annotation":{
"ncbigi":[
"499562672"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01885"
],
"refseq_old_locus_tag":[
"Synpcc7942_0370"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11645",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2291"
]
},
"annotation":{
"ncbigi":[
"499563336"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11645"
],
"refseq_old_locus_tag":[
"Synpcc7942_2291"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11635",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2289"
]
},
"annotation":{
"ncbigi":[
"499697656"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11635"
],
"refseq_old_locus_tag":[
"Synpcc7942_2289"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11630",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2288"
]
},
"annotation":{
"ncbigi":[
"499563339"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11630"
],
"refseq_old_locus_tag":[
"Synpcc7942_2288"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11450",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2252"
]
},
"annotation":{
"ncbigi":[
"748184448"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11450"
],
"refseq_old_locus_tag":[
"Synpcc7942_2252"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11640",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2290"
]
},
"annotation":{
"ncbigi":[
"499563337"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11640"
],
"refseq_old_locus_tag":[
"Synpcc7942_2290"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09720",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1915"
]
},
"annotation":{
"ncbigi":[
"499563706"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09720"
],
"refseq_old_locus_tag":[
"Synpcc7942_1915"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02810",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0552"
]
},
"annotation":{
"ncbigi":[
"499562498"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02810"
],
"refseq_old_locus_tag":[
"Synpcc7942_0552"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01430",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0281"
]
},
"annotation":{
"ncbigi":[
"499562761"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01430"
],
"refseq_old_locus_tag":[
"Synpcc7942_0281"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09840",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1939"
]
},
"annotation":{
"ncbigi":[
"499697513"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09840"
],
"refseq_old_locus_tag":[
"Synpcc7942_1939"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08420",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1651"
]
},
"annotation":{
"ncbigi":[
"1105096546"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08420"
],
"refseq_old_locus_tag":[
"Synpcc7942_1651"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01250",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0245"
]
},
"annotation":{
"ncbigi":[
"499562797"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01250"
],
"refseq_old_locus_tag":[
"Synpcc7942_0245"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09555",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1884"
]
},
"annotation":{
"ncbigi":[
"499563738"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09555"
],
"refseq_old_locus_tag":[
"Synpcc7942_1884"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03450",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0674"
]
},
"annotation":{
"ncbigi":[
"499562384"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03450"
],
"refseq_old_locus_tag":[
"Synpcc7942_0674"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10280",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2026"
]
},
"annotation":{
"ncbigi":[
"499563596"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10280"
],
"refseq_old_locus_tag":[
"Synpcc7942_2026"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12760",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2514"
]
},
"annotation":{
"ncbigi":[
"499563119"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12760"
],
"refseq_old_locus_tag":[
"Synpcc7942_2514"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10290",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2028"
]
},
"annotation":{
"ncbigi":[
"499563594"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10290"
],
"refseq_old_locus_tag":[
"Synpcc7942_2028"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12230",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2406"
]
},
"annotation":{
"ncbigi":[
"499563226"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12230"
],
"refseq_old_locus_tag":[
"Synpcc7942_2406"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10275",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2025"
]
},
"annotation":{
"ncbigi":[
"499563597"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10275"
],
"refseq_old_locus_tag":[
"Synpcc7942_2025"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09790",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1929"
]
},
"annotation":{
"ncbigi":[
"499563692"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09790"
],
"refseq_old_locus_tag":[
"Synpcc7942_1929"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11885",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2339"
]
},
"annotation":{
"ncbigi":[
"499697679"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11885"
],
"refseq_old_locus_tag":[
"Synpcc7942_2339"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10285",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2027"
]
},
"annotation":{
"ncbigi":[
"499563595"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10285"
],
"refseq_old_locus_tag":[
"Synpcc7942_2027"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1058"
]
},
"annotation":{
"ncbigi":[
"499562019"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05425"
],
"refseq_old_locus_tag":[
"Synpcc7942_1058"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11620",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2286"
]
},
"annotation":{
"ncbigi":[
"499697655"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11620"
],
"refseq_old_locus_tag":[
"Synpcc7942_2286"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03095",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0603"
]
},
"annotation":{
"ncbigi":[
"499562450"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03095"
],
"refseq_old_locus_tag":[
"Synpcc7942_0603"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11625",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2287"
]
},
"annotation":{
"ncbigi":[
"499563340"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11625"
],
"refseq_old_locus_tag":[
"Synpcc7942_2287"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00500",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0098"
]
},
"annotation":{
"ncbigi":[
"499562935"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00500"
],
"refseq_old_locus_tag":[
"Synpcc7942_0098"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00405",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0082"
]
},
"annotation":{
"ncbigi":[
"499696697"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00405"
],
"refseq_old_locus_tag":[
"Synpcc7942_0082"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09645",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1902"
]
},
"annotation":{
"ncbigi":[
"499563720"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09645"
],
"refseq_old_locus_tag":[
"Synpcc7942_1902"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10580",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2087"
]
},
"annotation":{
"ncbigi":[
"499697575"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10580"
],
"refseq_old_locus_tag":[
"Synpcc7942_2087"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07570",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1481"
]
},
"annotation":{
"ncbigi":[
"499563994"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07570"
],
"refseq_old_locus_tag":[
"Synpcc7942_1481"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09570",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1887"
]
},
"annotation":{
"ncbigi":[
"499563735"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09570"
],
"refseq_old_locus_tag":[
"Synpcc7942_1887"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06330",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1235"
]
},
"annotation":{
"ncbigi":[
"499697197"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06330"
],
"refseq_old_locus_tag":[
"Synpcc7942_1235"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09640",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1901"
]
},
"annotation":{
"ncbigi":[
"499697501"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09640"
],
"refseq_old_locus_tag":[
"Synpcc7942_1901"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09650",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1903"
]
},
"annotation":{
"ncbigi":[
"499563719"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09650"
],
"refseq_old_locus_tag":[
"Synpcc7942_1903"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05655",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1103"
]
},
"annotation":{
"ncbigi":[
"499697130"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05655"
],
"refseq_old_locus_tag":[
"Synpcc7942_1103"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05765",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1126"
]
},
"annotation":{
"ncbigi":[
"499561952"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05765"
],
"refseq_old_locus_tag":[
"Synpcc7942_1126"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00120",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0023"
]
},
"annotation":{
"ncbigi":[
"499563001"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00120"
],
"refseq_old_locus_tag":[
"Synpcc7942_0023"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02970",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0584"
]
},
"annotation":{
"ncbigi":[
"499562468"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02970"
],
"refseq_old_locus_tag":[
"Synpcc7942_0584"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06375",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1244"
]
},
"annotation":{
"ncbigi":[
"499697198"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06375"
],
"refseq_old_locus_tag":[
"Synpcc7942_1244"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10355",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2041"
]
},
"annotation":{
"ncbigi":[
"499697554"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10355"
],
"refseq_old_locus_tag":[
"Synpcc7942_2041"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02765",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0543"
]
},
"annotation":{
"ncbigi":[
"499696882"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02765"
],
"refseq_old_locus_tag":[
"Synpcc7942_0543"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02950",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0580"
]
},
"annotation":{
"ncbigi":[
"499696897"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02950"
],
"refseq_old_locus_tag":[
"Synpcc7942_0580"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01435",
"name":"glyA",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0282"
]
},
"annotation":{
"ncbigi":[
"499562760"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01435"
],
"refseq_name":[
"glyA"
],
"refseq_old_locus_tag":[
"Synpcc7942_0282"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09815",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1934"
]
},
"annotation":{
"ncbigi":[
"1105096548"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09815"
],
"refseq_old_locus_tag":[
"Synpcc7942_1934"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08520",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1672"
]
},
"annotation":{
"ncbigi":[
"499563945"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08520"
],
"refseq_old_locus_tag":[
"Synpcc7942_1672"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10105",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1993"
]
},
"annotation":{
"ncbigi":[
"499563630"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10105"
],
"refseq_old_locus_tag":[
"Synpcc7942_1993"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00700",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0138"
]
},
"annotation":{
"ncbigi":[
"499696726"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00700"
],
"refseq_old_locus_tag":[
"Synpcc7942_0138"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10110",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1994"
]
},
"annotation":{
"ncbigi":[
"499563629"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10110"
],
"refseq_old_locus_tag":[
"Synpcc7942_1994"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03120",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0608"
]
},
"annotation":{
"ncbigi":[
"499696909"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03120"
],
"refseq_old_locus_tag":[
"Synpcc7942_0608"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01755",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0344"
]
},
"annotation":{
"ncbigi":[
"499562698"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01755"
],
"refseq_old_locus_tag":[
"Synpcc7942_0344"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02000",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0392"
]
},
"annotation":{
"ncbigi":[
"499696827"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02000"
],
"refseq_old_locus_tag":[
"Synpcc7942_0392"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09115",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1794"
]
},
"annotation":{
"ncbigi":[
"499697459"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09115"
],
"refseq_old_locus_tag":[
"Synpcc7942_1794"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11990",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2360"
]
},
"annotation":{
"ncbigi":[
"499697691"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11990"
],
"refseq_old_locus_tag":[
"Synpcc7942_2360"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10955",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2156"
]
},
"annotation":{
"ncbigi":[
"499697611"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10955"
],
"refseq_old_locus_tag":[
"Synpcc7942_2156"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10825",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2134"
]
},
"annotation":{
"ncbigi":[
"499563485"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10825"
],
"refseq_old_locus_tag":[
"Synpcc7942_2134"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11740",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2310"
]
},
"annotation":{
"ncbigi":[
"499697667"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11740"
],
"refseq_old_locus_tag":[
"Synpcc7942_2310"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09960",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1963"
]
},
"annotation":{
"ncbigi":[
"499563659"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09960"
],
"refseq_old_locus_tag":[
"Synpcc7942_1963"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10035",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1979"
]
},
"annotation":{
"ncbigi":[
"499697529"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10035"
],
"refseq_old_locus_tag":[
"Synpcc7942_1979"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01800",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0354"
]
},
"annotation":{
"ncbigi":[
"499696810"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01800"
],
"refseq_old_locus_tag":[
"Synpcc7942_0354"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04985",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0970"
]
},
"annotation":{
"ncbigi":[
"499562102"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04985"
],
"refseq_old_locus_tag":[
"Synpcc7942_0970"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08075",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1581"
]
},
"annotation":{
"ncbigi":[
"499561568"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08075"
],
"refseq_old_locus_tag":[
"Synpcc7942_1581"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08770",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1723"
]
},
"annotation":{
"ncbigi":[
"499697425"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08770"
],
"refseq_old_locus_tag":[
"Synpcc7942_1723"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12855",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2532"
]
},
"annotation":{
"ncbigi":[
"499563105"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12855"
],
"refseq_old_locus_tag":[
"Synpcc7942_2532"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11000",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2164"
]
},
"annotation":{
"ncbigi":[
"499563458"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11000"
],
"refseq_old_locus_tag":[
"Synpcc7942_2164"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05350",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1043"
]
},
"annotation":{
"ncbigi":[
"499562034"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05350"
],
"refseq_old_locus_tag":[
"Synpcc7942_1043"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06065",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1184"
]
},
"annotation":{
"ncbigi":[
"748184614"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06065"
],
"refseq_old_locus_tag":[
"Synpcc7942_1184"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12060",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2373"
]
},
"annotation":{
"ncbigi":[
"499563259"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12060"
],
"refseq_old_locus_tag":[
"Synpcc7942_2373"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09235",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1819"
]
},
"annotation":{
"ncbigi":[
"499563802"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09235"
],
"refseq_old_locus_tag":[
"Synpcc7942_1819"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11355",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2236"
]
},
"annotation":{
"ncbigi":[
"499563389"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11355"
],
"refseq_old_locus_tag":[
"Synpcc7942_2236"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09735",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1918"
]
},
"annotation":{
"ncbigi":[
"499697505"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09735"
],
"refseq_old_locus_tag":[
"Synpcc7942_1918"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05995",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1169"
]
},
"annotation":{
"ncbigi":[
"499697162"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05995"
],
"refseq_old_locus_tag":[
"Synpcc7942_1169"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04250",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0822"
]
},
"annotation":{
"ncbigi":[
"499562246"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04250"
],
"refseq_old_locus_tag":[
"Synpcc7942_0822"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08460",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1659"
]
},
"annotation":{
"ncbigi":[
"499563956"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08460"
],
"refseq_old_locus_tag":[
"Synpcc7942_1659"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08150",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1596"
]
},
"annotation":{
"ncbigi":[
"499561583"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08150"
],
"refseq_old_locus_tag":[
"Synpcc7942_1596"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08845",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1738"
]
},
"annotation":{
"ncbigi":[
"499563880"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08845"
],
"refseq_old_locus_tag":[
"Synpcc7942_1738"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06675",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1305"
]
},
"annotation":{
"ncbigi":[
"499697239"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06675"
],
"refseq_old_locus_tag":[
"Synpcc7942_1305"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02275",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0445"
]
},
"annotation":{
"ncbigi":[
"499562601"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02275"
],
"refseq_old_locus_tag":[
"Synpcc7942_0445"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00800",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0158"
]
},
"annotation":{
"ncbigi":[
"499696738"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00800"
],
"refseq_old_locus_tag":[
"Synpcc7942_0158"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04245",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0821"
]
},
"annotation":{
"ncbigi":[
"499562247"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04245"
],
"refseq_old_locus_tag":[
"Synpcc7942_0821"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04275",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0827"
]
},
"annotation":{
"ncbigi":[
"499697014"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04275"
],
"refseq_old_locus_tag":[
"Synpcc7942_0827"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02205",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0432"
]
},
"annotation":{
"ncbigi":[
"499562613"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02205"
],
"refseq_old_locus_tag":[
"Synpcc7942_0432"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13300",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2611"
]
},
"annotation":{
"ncbigi":[
"499697799"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13300"
],
"refseq_old_locus_tag":[
"Synpcc7942_2611"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04865",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0946"
]
},
"annotation":{
"ncbigi":[
"499562125"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04865"
],
"refseq_old_locus_tag":[
"Synpcc7942_0946"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05500",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1072"
]
},
"annotation":{
"ncbigi":[
"499697119"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05500"
],
"refseq_old_locus_tag":[
"Synpcc7942_1072"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00685",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0135"
]
},
"annotation":{
"ncbigi":[
"499562899"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00685"
],
"refseq_old_locus_tag":[
"Synpcc7942_0135"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05155",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1005"
]
},
"annotation":{
"ncbigi":[
"499562069"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05155"
],
"refseq_old_locus_tag":[
"Synpcc7942_1005"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00150",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0029"
]
},
"annotation":{
"ncbigi":[
"499562995"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00150"
],
"refseq_old_locus_tag":[
"Synpcc7942_0029"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01220",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0240"
]
},
"annotation":{
"ncbigi":[
"499562802"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01220"
],
"refseq_old_locus_tag":[
"Synpcc7942_0240"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00145",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0028"
]
},
"annotation":{
"ncbigi":[
"499696673"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00145"
],
"refseq_old_locus_tag":[
"Synpcc7942_0028"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00140",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0027"
]
},
"annotation":{
"ncbigi":[
"499562997"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00140"
],
"refseq_old_locus_tag":[
"Synpcc7942_0027"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05380",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1049"
]
},
"annotation":{
"ncbigi":[
"499697110"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05380"
],
"refseq_old_locus_tag":[
"Synpcc7942_1049"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00160",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0031"
]
},
"annotation":{
"ncbigi":[
"499562993"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00160"
],
"refseq_old_locus_tag":[
"Synpcc7942_0031"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05375",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1048"
]
},
"annotation":{
"ncbigi":[
"499562024"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05375"
],
"refseq_old_locus_tag":[
"Synpcc7942_1048"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05410",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1055"
]
},
"annotation":{
"ncbigi":[
"499697111"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05410"
],
"refseq_old_locus_tag":[
"Synpcc7942_1055"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00155",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0030"
]
},
"annotation":{
"ncbigi":[
"499562994"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00155"
],
"refseq_old_locus_tag":[
"Synpcc7942_0030"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08830",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1735"
]
},
"annotation":{
"ncbigi":[
"499563883"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08830"
],
"refseq_old_locus_tag":[
"Synpcc7942_1735"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05395",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1052"
]
},
"annotation":{
"ncbigi":[
"499562025"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05395"
],
"refseq_old_locus_tag":[
"Synpcc7942_1052"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08840",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1737"
]
},
"annotation":{
"ncbigi":[
"499697430"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08840"
],
"refseq_old_locus_tag":[
"Synpcc7942_1737"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05400",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1053"
]
},
"annotation":{
"ncbigi":[
"499562024"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05400"
],
"refseq_old_locus_tag":[
"Synpcc7942_1053"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05385",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1050"
]
},
"annotation":{
"ncbigi":[
"499562027"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05385"
],
"refseq_old_locus_tag":[
"Synpcc7942_1050"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02300",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0450"
]
},
"annotation":{
"ncbigi":[
"499562596"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02300"
],
"refseq_old_locus_tag":[
"Synpcc7942_0450"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05390",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1051"
]
},
"annotation":{
"ncbigi":[
"499562026"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05390"
],
"refseq_old_locus_tag":[
"Synpcc7942_1051"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05370",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1047"
]
},
"annotation":{
"ncbigi":[
"499562025"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05370"
],
"refseq_old_locus_tag":[
"Synpcc7942_1047"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02140",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0419"
]
},
"annotation":{
"ncbigi":[
"499562626"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02140"
],
"refseq_old_locus_tag":[
"Synpcc7942_0419"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10300",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2030"
]
},
"annotation":{
"ncbigi":[
"499563592"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10300"
],
"refseq_old_locus_tag":[
"Synpcc7942_2030"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08835",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1736"
]
},
"annotation":{
"ncbigi":[
"499563882"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08835"
],
"refseq_old_locus_tag":[
"Synpcc7942_1736"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0328"
]
},
"annotation":{
"ncbigi":[
"499562714"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01670"
],
"refseq_old_locus_tag":[
"Synpcc7942_0328"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01760",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0345"
]
},
"annotation":{
"ncbigi":[
"499562697"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01760"
],
"refseq_old_locus_tag":[
"Synpcc7942_0345"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01665",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0327"
]
},
"annotation":{
"ncbigi":[
"499562715"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01665"
],
"refseq_old_locus_tag":[
"Synpcc7942_0327"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01660",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0326"
]
},
"annotation":{
"ncbigi":[
"499562716"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01660"
],
"refseq_old_locus_tag":[
"Synpcc7942_0326"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07705",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1507"
]
},
"annotation":{
"ncbigi":[
"499697325"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07705"
],
"refseq_old_locus_tag":[
"Synpcc7942_1507"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01655",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0325"
]
},
"annotation":{
"ncbigi":[
"499562717"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01655"
],
"refseq_old_locus_tag":[
"Synpcc7942_0325"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02760",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0542"
]
},
"annotation":{
"ncbigi":[
"499696881"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02760"
],
"refseq_old_locus_tag":[
"Synpcc7942_0542"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01445",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0284"
]
},
"annotation":{
"ncbigi":[
"499562757"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01445"
],
"refseq_old_locus_tag":[
"Synpcc7942_0284"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01450",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0285"
]
},
"annotation":{
"ncbigi":[
"499562756"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01450"
],
"refseq_old_locus_tag":[
"Synpcc7942_0285"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07290",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1425"
]
},
"annotation":{
"ncbigi":[
"499561662"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07290"
],
"refseq_old_locus_tag":[
"Synpcc7942_1425"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11955",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2353"
]
},
"annotation":{
"ncbigi":[
"499563277"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11955"
],
"refseq_old_locus_tag":[
"Synpcc7942_2353"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07285",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1424"
]
},
"annotation":{
"ncbigi":[
"499561663"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07285"
],
"refseq_old_locus_tag":[
"Synpcc7942_1424"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07220",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1411"
]
},
"annotation":{
"ncbigi":[
"499561675"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07220"
],
"refseq_old_locus_tag":[
"Synpcc7942_1411"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07275",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1422"
]
},
"annotation":{
"ncbigi":[
"499561665"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07275"
],
"refseq_old_locus_tag":[
"Synpcc7942_1422"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13425",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_B2623"
]
},
"annotation":{
"refseq_locus_tag":[
"SYNPCC7942_RS13425"
],
"refseq_old_locus_tag":[
"Synpcc7942_B2623"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07270",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1421"
]
},
"annotation":{
"ncbigi":[
"499561666"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07270"
],
"refseq_old_locus_tag":[
"Synpcc7942_1421"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00870",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0171"
]
},
"annotation":{
"ncbigi":[
"748184365"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00870"
],
"refseq_old_locus_tag":[
"Synpcc7942_0171"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07155",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1398"
]
},
"annotation":{
"ncbigi":[
"499561688"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07155"
],
"refseq_old_locus_tag":[
"Synpcc7942_1398"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09915",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1953"
]
},
"annotation":{
"ncbigi":[
"499563668"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09915"
],
"refseq_old_locus_tag":[
"Synpcc7942_1953"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06810",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1332"
]
},
"annotation":{
"ncbigi":[
"499561753"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06810"
],
"refseq_old_locus_tag":[
"Synpcc7942_1332"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02375",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0466"
]
},
"annotation":{
"ncbigi":[
"499562581"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02375"
],
"refseq_old_locus_tag":[
"Synpcc7942_0466"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06815",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1333"
]
},
"annotation":{
"ncbigi":[
"499561752"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06815"
],
"refseq_old_locus_tag":[
"Synpcc7942_1333"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09355",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1844"
]
},
"annotation":{
"ncbigi":[
"499563777"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09355"
],
"refseq_old_locus_tag":[
"Synpcc7942_1844"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10930",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2151"
]
},
"annotation":{
"ncbigi":[
"499697606"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10930"
],
"refseq_old_locus_tag":[
"Synpcc7942_2151"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02325",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0455"
]
},
"annotation":{
"ncbigi":[
"499696851"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02325"
],
"refseq_old_locus_tag":[
"Synpcc7942_0455"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11930",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2348"
]
},
"annotation":{
"ncbigi":[
"499697685"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11930"
],
"refseq_old_locus_tag":[
"Synpcc7942_2348"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01255",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0246"
]
},
"annotation":{
"ncbigi":[
"499562796"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01255"
],
"refseq_old_locus_tag":[
"Synpcc7942_0246"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02695",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0530"
]
},
"annotation":{
"ncbigi":[
"499696879"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02695"
],
"refseq_old_locus_tag":[
"Synpcc7942_0530"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01260",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0247"
]
},
"annotation":{
"ncbigi":[
"499696772"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01260"
],
"refseq_old_locus_tag":[
"Synpcc7942_0247"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08725",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1715"
]
},
"annotation":{
"ncbigi":[
"499563903"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08725"
],
"refseq_old_locus_tag":[
"Synpcc7942_1715"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01265",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0248"
]
},
"annotation":{
"ncbigi":[
"499696773"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01265"
],
"refseq_old_locus_tag":[
"Synpcc7942_0248"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07200",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1407"
]
},
"annotation":{
"ncbigi":[
"499561679"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07200"
],
"refseq_old_locus_tag":[
"Synpcc7942_1407"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02390",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0469"
]
},
"annotation":{
"ncbigi":[
"499562578"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02390"
],
"refseq_old_locus_tag":[
"Synpcc7942_0469"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11540",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2271"
]
},
"annotation":{
"ncbigi":[
"499563355"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11540"
],
"refseq_old_locus_tag":[
"Synpcc7942_2271"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05240",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1019"
]
},
"annotation":{
"ncbigi":[
"499562056"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05240"
],
"refseq_old_locus_tag":[
"Synpcc7942_1019"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11615",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2285"
]
},
"annotation":{
"ncbigi":[
"499563342"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11615"
],
"refseq_old_locus_tag":[
"Synpcc7942_2285"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05000",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0973"
]
},
"annotation":{
"refseq_locus_tag":[
"SYNPCC7942_RS05000"
],
"refseq_old_locus_tag":[
"Synpcc7942_0973"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02340",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0459"
]
},
"annotation":{
"ncbigi":[
"499562588"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02340"
],
"refseq_old_locus_tag":[
"Synpcc7942_0459"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06860",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1342"
]
},
"annotation":{
"ncbigi":[
"499697261"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06860"
],
"refseq_old_locus_tag":[
"Synpcc7942_1342"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02335",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0458"
]
},
"annotation":{
"ncbigi":[
"499562589"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02335"
],
"refseq_old_locus_tag":[
"Synpcc7942_0458"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13430",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_B2624"
]
},
"annotation":{
"refseq_locus_tag":[
"SYNPCC7942_RS13430"
],
"refseq_old_locus_tag":[
"Synpcc7942_B2624"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08655",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1700"
]
},
"annotation":{
"ncbigi":[
"499563917"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08655"
],
"refseq_old_locus_tag":[
"Synpcc7942_1700"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05810",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1135"
]
},
"annotation":{
"ncbigi":[
"499561944"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05810"
],
"refseq_old_locus_tag":[
"Synpcc7942_1135"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12145",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2390"
]
},
"annotation":{
"ncbigi":[
"748184429"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12145"
],
"refseq_old_locus_tag":[
"Synpcc7942_2390"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08430",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1653"
]
},
"annotation":{
"ncbigi":[
"499697394"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08430"
],
"refseq_old_locus_tag":[
"Synpcc7942_1653"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10700",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2111"
]
},
"annotation":{
"ncbigi":[
"499697586"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10700"
],
"refseq_old_locus_tag":[
"Synpcc7942_2111"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00305",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0061"
]
},
"annotation":{
"ncbigi":[
"499696691"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00305"
],
"refseq_old_locus_tag":[
"Synpcc7942_0061"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08735",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1717"
]
},
"annotation":{
"ncbigi":[
"499563901"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08735"
],
"refseq_old_locus_tag":[
"Synpcc7942_1717"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12525",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2464"
]
},
"annotation":{
"ncbigi":[
"499563167"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12525"
],
"refseq_old_locus_tag":[
"Synpcc7942_2464"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02250",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0440"
]
},
"annotation":{
"ncbigi":[
"499562606"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02250"
],
"refseq_old_locus_tag":[
"Synpcc7942_0440"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08550",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1678"
]
},
"annotation":{
"ncbigi":[
"499563939"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08550"
],
"refseq_old_locus_tag":[
"Synpcc7942_1678"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05610",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1093"
]
},
"annotation":{
"ncbigi":[
"499697126"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05610"
],
"refseq_old_locus_tag":[
"Synpcc7942_1093"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02595",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0511"
]
},
"annotation":{
"ncbigi":[
"499562538"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02595"
],
"refseq_old_locus_tag":[
"Synpcc7942_0511"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13120",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2577"
]
},
"annotation":{
"ncbigi":[
"499563060"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13120"
],
"refseq_old_locus_tag":[
"Synpcc7942_2577"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04690",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0912"
]
},
"annotation":{
"ncbigi":[
"499562159"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04690"
],
"refseq_old_locus_tag":[
"Synpcc7942_0912"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02065",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0405"
]
},
"annotation":{
"ncbigi":[
"499696833"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02065"
],
"refseq_old_locus_tag":[
"Synpcc7942_0405"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_1478",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1478"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00985",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0194"
]
},
"annotation":{
"ncbigi":[
"499696752"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00985"
],
"refseq_old_locus_tag":[
"Synpcc7942_0194"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01645",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0323"
]
},
"annotation":{
"ncbigi":[
"499562719"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01645"
],
"refseq_old_locus_tag":[
"Synpcc7942_0323"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00005",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0001"
]
},
"annotation":{
"ncbigi":[
"499563023"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00005"
],
"refseq_old_locus_tag":[
"Synpcc7942_0001"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01640",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0322"
]
},
"annotation":{
"ncbigi":[
"499562720"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01640"
],
"refseq_old_locus_tag":[
"Synpcc7942_0322"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS00475",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0094"
]
},
"annotation":{
"ncbigi":[
"499696702"
],
"refseq_locus_tag":[
"SYNPCC7942_RS00475"
],
"refseq_old_locus_tag":[
"Synpcc7942_0094"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02900",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0570"
]
},
"annotation":{
"ncbigi":[
"499562481"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02900"
],
"refseq_old_locus_tag":[
"Synpcc7942_0570"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12620",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2487"
]
},
"annotation":{
"ncbigi":[
"499563146"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12620"
],
"refseq_old_locus_tag":[
"Synpcc7942_2487"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11170",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2199"
]
},
"annotation":{
"ncbigi":[
"499697628"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11170"
],
"refseq_old_locus_tag":[
"Synpcc7942_2199"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13295",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2610"
]
},
"annotation":{
"ncbigi":[
"499697798"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13295"
],
"refseq_old_locus_tag":[
"Synpcc7942_2610"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS09675",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1908"
]
},
"annotation":{
"ncbigi":[
"499563714"
],
"refseq_locus_tag":[
"SYNPCC7942_RS09675"
],
"refseq_old_locus_tag":[
"Synpcc7942_1908"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02025",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0397"
]
},
"annotation":{
"ncbigi":[
"499696831"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02025"
],
"refseq_old_locus_tag":[
"Synpcc7942_0397"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS13760",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1470"
]
},
"annotation":{
"ncbigi":[
"499563984"
],
"refseq_locus_tag":[
"SYNPCC7942_RS13760"
],
"refseq_old_locus_tag":[
"Synpcc7942_1470"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_0491",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0491"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07520",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1471"
]
},
"annotation":{
"ncbigi":[
"499563985"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07520"
],
"refseq_old_locus_tag":[
"Synpcc7942_1471"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05670",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1106"
]
},
"annotation":{
"ncbigi":[
"499561972"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05670"
],
"refseq_old_locus_tag":[
"Synpcc7942_1106"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07525",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1472"
]
},
"annotation":{
"ncbigi":[
"499697312"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07525"
],
"refseq_old_locus_tag":[
"Synpcc7942_1472"
],
"sbo":"SBO:0000243"
}
},
{
"id":"Synpcc7942_0668",
"name":"None",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0668"
]
},
"annotation":{
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07530",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1473"
]
},
"annotation":{
"ncbigi":[
"499697313"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07530"
],
"refseq_old_locus_tag":[
"Synpcc7942_1473"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10615",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2094"
]
},
"annotation":{
"ncbigi":[
"499563526"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10615"
],
"refseq_old_locus_tag":[
"Synpcc7942_2094"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07535",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1474"
]
},
"annotation":{
"ncbigi":[
"499563987"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07535"
],
"refseq_old_locus_tag":[
"Synpcc7942_1474"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS10610",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2093"
]
},
"annotation":{
"ncbigi":[
"499697580"
],
"refseq_locus_tag":[
"SYNPCC7942_RS10610"
],
"refseq_old_locus_tag":[
"Synpcc7942_2093"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11985",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2359"
]
},
"annotation":{
"ncbigi":[
"499697690"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11985"
],
"refseq_old_locus_tag":[
"Synpcc7942_2359"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01570",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0308"
]
},
"annotation":{
"ncbigi":[
"499562734"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01570"
],
"refseq_old_locus_tag":[
"Synpcc7942_0308"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07515",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1469"
]
},
"annotation":{
"ncbigi":[
"499697311"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07515"
],
"refseq_old_locus_tag":[
"Synpcc7942_1469"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12755",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2513"
]
},
"annotation":{
"ncbigi":[
"499697762"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12755"
],
"refseq_old_locus_tag":[
"Synpcc7942_2513"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07510",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1468"
]
},
"annotation":{
"ncbigi":[
"499563982"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07510"
],
"refseq_old_locus_tag":[
"Synpcc7942_1468"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11800",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2321"
]
},
"annotation":{
"ncbigi":[
"499563308"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11800"
],
"refseq_old_locus_tag":[
"Synpcc7942_2321"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06440",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1257"
]
},
"annotation":{
"ncbigi":[
"499697204"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06440"
],
"refseq_old_locus_tag":[
"Synpcc7942_1257"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03350",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0654"
]
},
"annotation":{
"ncbigi":[
"499696931"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03350"
],
"refseq_old_locus_tag":[
"Synpcc7942_0654"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01680",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0330"
]
},
"annotation":{
"ncbigi":[
"748184746"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01680"
],
"refseq_old_locus_tag":[
"Synpcc7942_0330"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08050",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1576"
]
},
"annotation":{
"ncbigi":[
"499561563"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08050"
],
"refseq_old_locus_tag":[
"Synpcc7942_1576"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07025",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1373"
]
},
"annotation":{
"ncbigi":[
"499561714"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07025"
],
"refseq_old_locus_tag":[
"Synpcc7942_1373"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08110",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1588"
]
},
"annotation":{
"ncbigi":[
"499697367"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08110"
],
"refseq_old_locus_tag":[
"Synpcc7942_1588"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12980",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2554"
]
},
"annotation":{
"ncbigi":[
"499563083"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12980"
],
"refseq_old_locus_tag":[
"Synpcc7942_2554"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12970",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2552"
]
},
"annotation":{
"ncbigi":[
"499563085"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12970"
],
"refseq_old_locus_tag":[
"Synpcc7942_2552"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12975",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2553"
]
},
"annotation":{
"ncbigi":[
"499563084"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12975"
],
"refseq_old_locus_tag":[
"Synpcc7942_2553"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07820",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1530"
]
},
"annotation":{
"ncbigi":[
"499564043"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07820"
],
"refseq_old_locus_tag":[
"Synpcc7942_1530"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06320",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1233"
]
},
"annotation":{
"ncbigi":[
"499561848"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06320"
],
"refseq_old_locus_tag":[
"Synpcc7942_1233"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07405",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1447"
]
},
"annotation":{
"ncbigi":[
"499697302"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07405"
],
"refseq_old_locus_tag":[
"Synpcc7942_1447"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS07280",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1423"
]
},
"annotation":{
"ncbigi":[
"499697295"
],
"refseq_locus_tag":[
"SYNPCC7942_RS07280"
],
"refseq_old_locus_tag":[
"Synpcc7942_1423"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12130",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2387"
]
},
"annotation":{
"ncbigi":[
"499697705"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12130"
],
"refseq_old_locus_tag":[
"Synpcc7942_2387"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02780",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0546"
]
},
"annotation":{
"ncbigi":[
"499562504"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02780"
],
"refseq_old_locus_tag":[
"Synpcc7942_0546"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04725",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0918"
]
},
"annotation":{
"ncbigi":[
"499697053"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04725"
],
"refseq_old_locus_tag":[
"Synpcc7942_0918"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS12165",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2394"
]
},
"annotation":{
"ncbigi":[
"499563238"
],
"refseq_locus_tag":[
"SYNPCC7942_RS12165"
],
"refseq_old_locus_tag":[
"Synpcc7942_2394"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08140",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1594"
]
},
"annotation":{
"ncbigi":[
"499561581"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08140"
],
"refseq_old_locus_tag":[
"Synpcc7942_1594"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS08135",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1593"
]
},
"annotation":{
"ncbigi":[
"499697370"
],
"refseq_locus_tag":[
"SYNPCC7942_RS08135"
],
"refseq_old_locus_tag":[
"Synpcc7942_1593"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS06475",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1264"
]
},
"annotation":{
"ncbigi":[
"1174091211"
],
"refseq_locus_tag":[
"SYNPCC7942_RS06475"
],
"refseq_old_locus_tag":[
"Synpcc7942_1264"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04195",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0811"
]
},
"annotation":{
"ncbigi":[
"499697007"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04195"
],
"refseq_old_locus_tag":[
"Synpcc7942_0811"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS01565",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0307"
]
},
"annotation":{
"ncbigi":[
"499696795"
],
"refseq_locus_tag":[
"SYNPCC7942_RS01565"
],
"refseq_old_locus_tag":[
"Synpcc7942_0307"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS11110",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_2186"
]
},
"annotation":{
"ncbigi":[
"499697621"
],
"refseq_locus_tag":[
"SYNPCC7942_RS11110"
],
"refseq_old_locus_tag":[
"Synpcc7942_2186"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS03080",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0600"
]
},
"annotation":{
"ncbigi":[
"499562452"
],
"refseq_locus_tag":[
"SYNPCC7942_RS03080"
],
"refseq_old_locus_tag":[
"Synpcc7942_0600"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS04045",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0780"
]
},
"annotation":{
"ncbigi":[
"499696990"
],
"refseq_locus_tag":[
"SYNPCC7942_RS04045"
],
"refseq_old_locus_tag":[
"Synpcc7942_0780"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05695",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1111"
]
},
"annotation":{
"ncbigi":[
"499697133"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05695"
],
"refseq_old_locus_tag":[
"Synpcc7942_1111"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05745",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_1121"
]
},
"annotation":{
"ncbigi":[
"499697137"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05745"
],
"refseq_old_locus_tag":[
"Synpcc7942_1121"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02470",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0485"
]
},
"annotation":{
"ncbigi":[
"499696863"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02470"
],
"refseq_old_locus_tag":[
"Synpcc7942_0485"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS05090",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0991"
]
},
"annotation":{
"ncbigi":[
"499562082"
],
"refseq_locus_tag":[
"SYNPCC7942_RS05090"
],
"refseq_old_locus_tag":[
"Synpcc7942_0991"
],
"sbo":"SBO:0000243"
}
},
{
"id":"SYNPCC7942_RS02885",
"name":"",
"notes":{
"original_bigg_ids":[
"Synpcc7942_0567"
]
},
"annotation":{
"ncbigi":[
"499696892"
],
"refseq_locus_tag":[
"SYNPCC7942_RS02885"
],
"refseq_old_locus_tag":[
"Synpcc7942_0567"
],
"sbo":"SBO:0000243"
}
}
],
"id":"iJB785",
"compartments":{
"c":"cytosol",
"cm":"cytosolic membrane",
"cx":"carboxyzome",
"e":"extracellular space",
"p":"periplasm",
"u":"thylakoid",
"um":"thylakoid membrane"
},
"version":"1"
}