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{
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"name":"Nicotinamidase",
"metabolites":{
"h2o_c":-1.0,
"nac_c":1.0,
"ncam_c":-1.0,
"nh4_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_33570",
"subsystem":"Nicotinate and nicotinamide metabolism",
"notes":{
"original_bigg_ids":[
"NNAM"
]
},
"annotation":{
"bigg.reaction":[
"NNAM"
],
"biocyc":[
"META:NICOTINAMID-RXN"
],
"ec-code":[
"3.5.1.19"
],
"kegg.reaction":[
"R01268"
],
"metanetx.reaction":[
"MNXR101977"
],
"rhea":[
"14545",
"14547",
"14546",
"14548"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00938"
]
}
},
{
"id":"MANpts",
"name":"D-mannose transport via PEP:Pyr PTS",
"metabolites":{
"man6p_c":1.0,
"man_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CD630_30150 and CD630_30140 and CD630_30130) or (CD630_25660 and CD630_25670 and CD630_25680) or (CD630_32780 and CD630_32790 and CD630_32770 and CD630_32760) or (CD630_10740 and CD630_10760 and CD630_10770 and CD630_10780) or (CD630_04910 and CD630_04920 and CD630_04930 and CD630_04940) or (CD630_02860 and CD630_02870 and CD630_02880 and CD630_02890) or (CD630_02840 and CD630_02850)",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"MANpts"
]
},
"annotation":{
"bigg.reaction":[
"MANpts"
],
"metanetx.reaction":[
"MNXR101401"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05610",
"rxn08885"
]
}
},
{
"id":"GLCADpts",
"name":"",
"metabolites":{
"g6p_A_c":1.0,
"glc__aD_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CD630_25120 and CD630_25100) or (CD630_26660 and CD630_26670) or (CD630_30270 and CD630_30300) or (CD630_30580 and CD630_30610) or (CD630_31010 and CD630_31030)",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"GLCADpts"
]
},
"annotation":{
"bigg.reaction":[
"GLCADpts"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MAN6Gpts",
"name":"",
"metabolites":{
"h2o_c":-1.0,
"h_c":3.0,
"man6pglyc_c":1.0,
"man6pglyc_e":-1.0,
"pep_c":-1.0,
"pi_c":1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"MAN6Gpts"
]
},
"annotation":{
"bigg.reaction":[
"MAN6Gpts"
],
"sbo":"SBO:0000185"
}
},
{
"id":"CELLBpts_2",
"name":"",
"metabolites":{
"cellb6p_c":1.0,
"cellb_e":-1.0,
"h_c":-2.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CD630_01350 and CD630_01360 and CD630_01370) or (CD630_08630 and CD630_08620 and CD630_08610) or (CD630_28800 and CD630_28830 and CD630_28840) or (CD630_30800 and CD630_30490 and CD630_30480) or (CD630_30800 and CD630_30810 and CD630_30820)",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"CELLBpts"
]
},
"annotation":{
"bigg.reaction":[
"CELLBpts_2"
],
"sbo":"SBO:0000185"
}
},
{
"id":"SUCpts",
"name":"Sucrose transport via PEP:Pyr PTS",
"metabolites":{
"pep_c":-1.0,
"pyr_c":1.0,
"suc6p_c":1.0,
"sucr_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_04690",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"SUCpts"
]
},
"annotation":{
"bigg.reaction":[
"SUCpts"
],
"metanetx.reaction":[
"MNXR104643"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05655",
"rxn09274"
]
}
},
{
"id":"MNLpts",
"name":"Mannitol transport via PEP:Pyr PTS",
"metabolites":{
"mnl1p_c":1.0,
"mnl_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_23320 and CD630_23340",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"MNLpts"
]
},
"annotation":{
"bigg.reaction":[
"MNLpts"
],
"metanetx.reaction":[
"MNXR101677"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08949",
"rxn13944",
"rxn13934",
"rxn05617"
]
}
},
{
"id":"DACHpts",
"name":"",
"metabolites":{
"chtbs6p_c":1.0,
"dachi_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_34450 and CD630_34440 and CD630_34430",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"DACHpts"
]
},
"annotation":{
"bigg.reaction":[
"DACHpts"
],
"sbo":"SBO:0000185"
}
},
{
"id":"FRUpts",
"name":"D-fructose transport via PEP:Pyr PTS",
"metabolites":{
"f1p_c":1.0,
"fru_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_31340 or (CD630_02060 and CD630_02070 and CD630_02080) or (CD630_32780 and CD630_32790 and CD630_32770 and CD630_32760) or (CD630_10740 and CD630_10760 and CD630_10770 and CD630_10780) or (CD630_04910 and CD630_04920 and CD630_04930 and CD630_04940) or (CD630_02860 and CD630_02870 and CD630_02880 and CD630_02890) or (CD630_02840 and CD630_02850) or (CD630_36290 and CD630_36300)",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"FRUpts2_2"
]
},
"annotation":{
"bigg.reaction":[
"FRUpts"
],
"metanetx.reaction":[
"MNXR99661"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn05560",
"rxn08536"
]
}
},
{
"id":"TGTpts",
"name":"",
"metabolites":{
"pep_c":-1.0,
"pyr_c":1.0,
"tag6p__D_c":1.0,
"tgt_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_30750",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"TGTpts"
]
},
"annotation":{
"bigg.reaction":[
"TGTpts"
],
"sbo":"SBO:0000185"
}
},
{
"id":"SBTpts",
"name":"D-sorbitol transport via PEP:Pyr PTS",
"metabolites":{
"pep_c":-1.0,
"pyr_c":1.0,
"sbt6p_c":1.0,
"sbt__D_e":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"(CD630_07640 and CD630_07650 and CD630_07670) or (CD630_24140 and CD630_07650 and CD630_07670 and CD630_07660)",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"SBTpts"
]
},
"annotation":{
"bigg.reaction":[
"SBTpts"
],
"metanetx.reaction":[
"MNXR104290"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn09242",
"rxn10184"
]
}
},
{
"id":"GLCpts",
"name":"D-glucose transport via PEP:Pyr PTS",
"metabolites":{
"g6p_c":1.0,
"glc__D_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_03880 or CD630_31270 or CD630_31250 or CD630_30970 or (CD630_30300 and CD630_30270)",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"GLCpts"
]
},
"annotation":{
"bigg.reaction":[
"GLCpts"
],
"metanetx.reaction":[
"MNXR100237"
],
"sbo":"SBO:0000185",
"seed.reaction":[
"rxn08612",
"rxn05226"
]
}
},
{
"id":"FUCpts",
"name":"",
"metabolites":{
"fc1p_c":1.0,
"fuc_e":-1.0,
"pep_c":-1.0,
"pyr_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"PEP-dependent transporter",
"notes":{
"original_bigg_ids":[
"FUCpts"
]
},
"annotation":{
"bigg.reaction":[
"FUCpts"
],
"sbo":"SBO:0000185"
}
},
{
"id":"MOHMT",
"name":"3-methyl-2-oxobutanoate hydroxymethyltransferase",
"metabolites":{
"2dhp_c":1.0,
"3mob_c":-1.0,
"h2o_c":-1.0,
"mlthf_c":-1.0,
"thf_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_15130",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"MOHMT"
]
},
"annotation":{
"bigg.reaction":[
"MOHMT"
],
"ec-code":[
"2.1.2.11"
],
"kegg.reaction":[
"R01226"
],
"metanetx.reaction":[
"MNXR101702"
],
"rhea":[
"11824",
"11827",
"11825",
"11826"
],
"sbo":"SBO:0000176"
}
},
{
"id":"2DHPFALDL",
"name":"2-dehydropantoate formaldehyde-lyase (3-methyl-2-oxobutanoate-forming)",
"metabolites":{
"2dhp_c":-1.0,
"3mob_c":1.0,
"fald_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_15130",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"2DHPFALDL"
]
},
"annotation":{
"bigg.reaction":[
"2DHPFALDL"
],
"biocyc":[
"META:KETOPANTOALDOLASE-RXN"
],
"ec-code":[
"4.1.2.12",
"2.1.2.11"
],
"kegg.reaction":[
"R01216"
],
"metanetx.reaction":[
"MNXR94792"
],
"rhea":[
"23279",
"23277",
"23276",
"23278"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00905"
]
}
},
{
"id":"PPCDC",
"name":"Phosphopantothenoylcysteine decarboxylase",
"metabolites":{
"4ppcys_c":-1.0,
"co2_c":1.0,
"h_c":-1.0,
"pan4p_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_25870",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PPCDC"
]
},
"annotation":{
"bigg.reaction":[
"PPCDC"
],
"biocyc":[
"META:P-PANTOCYSDECARB-RXN"
],
"ec-code":[
"4.1.1.36"
],
"kegg.reaction":[
"R03269"
],
"metanetx.reaction":[
"MNXR103098"
],
"reactome.reaction":[
"R-BTA-196840",
"R-HSA-196840",
"R-SSC-196840",
"R-CFA-196840",
"R-GGA-196840",
"R-XTR-196840",
"R-ATH-196840",
"R-SCE-196840",
"R-PFA-196840",
"R-MMU-196840",
"R-OSA-196840",
"R-DRE-196840",
"R-DDI-196840",
"R-DME-196840",
"R-TGU-196840",
"R-RNO-196840",
"R-CEL-196840"
],
"rhea":[
"16793",
"16796",
"16794",
"16795"
],
"sabiork":[
"3090"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn02341"
]
}
},
{
"id":"GCOADH",
"name":"",
"metabolites":{
"fad_c":-1.0,
"fadh2_c":1.0,
"gccoa_c":1.0,
"gcoa_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"GCOADH"
]
},
"annotation":{
"bigg.reaction":[
"GCOADH"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PANTS",
"name":"Pantothenate synthase",
"metabolites":{
"ala_B_c":-1.0,
"amp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pant__R_c":-1.0,
"pnto__R_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_15120",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PBAL"
]
},
"annotation":{
"bigg.reaction":[
"PANTS"
],
"biocyc":[
"META:PANTOATE-BETA-ALANINE-LIG-RXN"
],
"ec-code":[
"6.3.2.1"
],
"kegg.reaction":[
"R02473"
],
"metanetx.reaction":[
"MNXR102345"
],
"rhea":[
"10914",
"10913",
"10915",
"10912"
],
"sabiork":[
"2406"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn01791"
]
}
},
{
"id":"PPNCL3",
"name":"4'-Phosphopantothenate:L-cysteine ligase",
"metabolites":{
"4ppan_c":-1.0,
"4ppcys_c":1.0,
"amp_c":1.0,
"atp_c":-1.0,
"cys__L_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_25870",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PPNCL3"
]
},
"annotation":{
"bigg.reaction":[
"PPNCL3"
],
"biocyc":[
"META:RXN66-555"
],
"ec-code":[
"6.3.2",
"6.3.2.5"
],
"kegg.reaction":[
"R04230"
],
"metanetx.reaction":[
"MNXR103120"
],
"reactome.reaction":[
"R-CEL-196753",
"R-SSC-196753",
"R-CFA-196753",
"R-MMU-196753",
"R-SCE-196753",
"R-BTA-196753",
"R-TGU-196753",
"R-XTR-196753",
"R-PFA-196753",
"R-GGA-196753",
"R-ATH-196753",
"R-DME-196753",
"R-DRE-196753",
"R-HSA-196753",
"R-SPO-196753",
"R-OSA-196753",
"R-RNO-196753",
"R-DDI-196753"
],
"rhea":[
"25157",
"25156",
"25158",
"25159"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn12512"
]
}
},
{
"id":"PNTK",
"name":"Pantothenate kinase",
"metabolites":{
"4ppan_c":1.0,
"adp_c":1.0,
"atp_c":-1.0,
"h_c":1.0,
"pnto__R_c":-1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_35550",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PNTK"
]
},
"annotation":{
"bigg.reaction":[
"PNTK"
],
"biocyc":[
"META:PANTOTHENATE-KIN-RXN"
],
"ec-code":[
"2.7.1.33"
],
"kegg.reaction":[
"R03018"
],
"metanetx.reaction":[
"MNXR103050"
],
"reactome.reaction":[
"R-MMU-199203",
"R-XTR-199203",
"R-HSA-196857",
"R-TGU-196857",
"R-BTA-199203",
"R-DRE-199203",
"R-CFA-199203",
"R-SSC-199203",
"R-CFA-196857",
"R-TGU-199203",
"R-SSC-196857",
"R-PFA-199203",
"R-MMU-196857",
"R-SCE-196857",
"R-RNO-199203",
"R-GGA-199203",
"R-DME-199203",
"R-DRE-196857",
"R-BTA-196857",
"R-HSA-199203",
"R-XTR-196857",
"R-GGA-196857",
"R-DME-196857",
"R-PFA-196857",
"R-SCE-199203",
"R-RNO-196857"
],
"rhea":[
"16376",
"16375",
"16373",
"16374"
],
"sabiork":[
"2868"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn12510"
]
}
},
{
"id":"ACPPD",
"name":"",
"metabolites":{
"aacp_c":1.0,
"h2o_c":-1.0,
"h_c":2.0,
"hacp_c":-1.0,
"pan4p_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_15430",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"ACPPD"
]
},
"annotation":{
"bigg.reaction":[
"ACPPD"
],
"sbo":"SBO:0000176"
}
},
{
"id":"PNCDC_1",
"name":"",
"metabolites":{
"co2_c":1.0,
"h_c":-2.0,
"ptcys_c":-1.0,
"ptth_c":1.0
},
"lower_bound":-1000.0,
"upper_bound":1000.0,
"gene_reaction_rule":"",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PNCDC"
]
},
"annotation":{
"bigg.reaction":[
"PNCDC_1"
],
"sbo":"SBO:0000176"
}
},
{
"id":"HACPS",
"name":"",
"metabolites":{
"aacp_c":-1.0,
"coa_c":-1.0,
"hacp_c":1.0,
"pap_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_34660",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"HACPS"
]
},
"annotation":{
"bigg.reaction":[
"HACPS"
],
"sbo":"SBO:0000176"
}
},
{
"id":"DPCOAK",
"name":"Dephospho-CoA kinase",
"metabolites":{
"adp_c":1.0,
"atp_c":-1.0,
"coa_c":1.0,
"dpcoa_c":-1.0,
"h_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_11290",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"DPCOAK"
]
},
"annotation":{
"bigg.reaction":[
"DPCOAK"
],
"biocyc":[
"META:DEPHOSPHOCOAKIN-RXN"
],
"ec-code":[
"2.7.1.24"
],
"kegg.reaction":[
"R00130"
],
"metanetx.reaction":[
"MNXR97762"
],
"reactome.reaction":[
"R-XTR-196773",
"R-SSC-196773",
"R-RNO-196773",
"R-CFA-196773",
"R-DDI-196773",
"R-CEL-196773",
"R-GGA-196773",
"R-MMU-196773",
"R-OSA-196773",
"R-PFA-196773",
"R-SCE-196773",
"R-DRE-196773",
"R-TGU-196773",
"R-ATH-196773",
"R-DME-196773",
"R-HSA-196773",
"R-BTA-196773"
],
"rhea":[
"18248",
"18245",
"18247",
"18246"
],
"sabiork":[
"48"
],
"sbo":"SBO:0000176",
"seed.reaction":[
"rxn00100"
]
}
},
{
"id":"PPNCL2",
"name":"Phosphopantothenate-cysteine ligase",
"metabolites":{
"4ppan_c":-1.0,
"4ppcys_c":1.0,
"cmp_c":1.0,
"ctp_c":-1.0,
"cys__L_c":-1.0,
"h_c":1.0,
"ppi_c":1.0
},
"lower_bound":0.0,
"upper_bound":1000.0,
"gene_reaction_rule":"CD630_25870",
"subsystem":"Pantothenate and CoA biosynthesis",
"notes":{
"original_bigg_ids":[
"PPNCL2"
]
},
"annotation":{
"bigg.reaction":[
"PPNCL2"
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},
{
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"R-DRE-70542",
"R-DDI-70542",
"R-MMU-70542",
"R-SCE-70542",
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}
},
{
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}
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},
{
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},
{
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{
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}
},
{
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{
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},
{
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}
},
{
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}
},
{
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}
},
{
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},
{
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}
},
{
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}
},
{
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}
},
{
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}
},
{
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},
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}
},
{
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},
{
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}
},
{
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}
},
{
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},
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},
{
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}
},
{
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},
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},
{
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}
},
{
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},
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},
{
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},
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}
},
{
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},
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}
},
{
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}
},
{
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},
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},
{
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{
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{
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{
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{
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{
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{
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},
{
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"e":"extracellular space"
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}